Citrus Sinensis ID: 027991

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
Protein Sequence
MKLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQCDS
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHccccccccEEEEcccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHccccccccccccccccccccHHHcHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccccHHHHHccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEEcHccHHHHHHHHHHHHHcccccEEEEEccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mklwlfnrkgpsgfsasstaeevtdgidgsglTAIVTGATSGIGTETARVLALRGVHVVMGvrdiaagkdVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILInnagimgtpfmlskdnIELQFATNHLGHFLLTNLLLDTMKKTArksggegriinvsseghrlayhegirfdkindpsgsfqSSALLLLLLLHLLFFLQCDS
Flexible Loop (DISEMBL)
mklwlfnrkgpsgfsassTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMgvrdiaagkdvketIVKEipsakvdaMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTarksggegriinvsseghRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQCDS
Low Complexity Region (SEG)
MKLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAtnhlghflltnlllDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSAlllllllhllfflQCDS
Disordered region (IsUnstruct)
**************************IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKK********GRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQC**
Disordered Region (DISOPRED)
*KLW***RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQCD*
Disordered Region (DISEMBL)
MKLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQCDS
Disordered Region (DISPRO)
***********************TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQCD*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQCDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	216	2.2.26 [Sep-21-2011]
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.879	0.601	0.753	2e-78
A2RVM0	322	Short-chain dehydrogenase	no	no	0.879	0.590	0.726	4e-77
Q5F389	414	WW domain-containing oxid	yes	no	0.805	0.420	0.417	1e-33
Q91WL8	414	WW domain-containing oxid	yes	no	0.805	0.420	0.406	8e-32
Q9NZC7	414	WW domain-containing oxid	yes	no	0.805	0.420	0.406	2e-31
Q5R9W5	414	WW domain-containing oxid	yes	no	0.805	0.420	0.401	1e-30
O74959	339	Uncharacterized oxidoredu	yes	no	0.773	0.492	0.398	3e-26
Q8NBN7	331	Retinol dehydrogenase 13	no	no	0.810	0.528	0.415	4e-24
Q803A8	412	WW domain-containing oxid	no	no	0.75	0.393	0.395	9e-24
Q8BYK4	316	Retinol dehydrogenase 12	no	no	0.712	0.487	0.388	5e-23

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  291 bits (746), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/191 (75%), Positives = 163/191 (85%), Gaps = 1/191 (0%)

Query: 3   LWLFN-RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG 61
           +W F+ +KG SGFS SSTAE+VT GID +GLTAIVTGA+SGIG ET RVLALRG HV+MG
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMG 60

Query: 62  VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           VR++ A KDVK+TI+K+IPSAKVDA+ELDLSSL SV+ FASE+N     LNILINNAGIM
Sbjct: 61  VRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIM 120

Query: 122 GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE 181
             PF LSKDNIELQFATNH+GHFLLTNLLLDTMKKT R+S  EGRI+NV+SE HR AY E
Sbjct: 121 ACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPE 180

Query: 182 GIRFDKINDPS 192
           GIRFDKIND S
Sbjct: 181 GIRFDKINDQS 191

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  287 bits (734), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 138/190 (72%), Positives = 157/190 (82%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F  KG SGFS+ STAEEVT G+DG+GLTAIVTGA+SGIG ETARVL+LRGVHVVM V
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R+  +G  VKE IVK++P AK+D MELDLSS+ SVR FASEY      LN+LINNAGIM 
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            PFMLSKDNIELQFATNHLGHFLLT LLLDTMK T+R+S  EGRI+N+SSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 183 IRFDKINDPS 192
           +RFDKIND S
Sbjct: 181 VRFDKINDKS 190

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  142 bits (359), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 113/187 (60%), Gaps = 13/187 (6%)

Query: 14  FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           +  +STA E+  G D SG   I+TGA SGIG ETA+  AL G +V++  R+++ G D  +
Sbjct: 107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query: 74  TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
            I++E   AKV+AM LDL+SL SV+NFA  +  ++  L+IL+ NA I G+ + L++D +E
Sbjct: 167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             F  NHLGHF L  LL D +++++       R++ VSSE H        RF +I D SG
Sbjct: 227 STFQVNHLGHFYLVQLLEDILRRSS-----PARVVVVSSESH--------RFTEIKDSSG 273

Query: 194 SFQSSAL 200
               S L
Sbjct: 274 KLDFSLL 280

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  136 bits (343), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 13/187 (6%)

Query: 14  FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           +  S+TA E+  G D +G   +VTGA SGIG ETA+  AL G HV++  R+++   +   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVS 166

Query: 74  TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
            I++E   AKV+AM LDL+ L SV++FA  +  ++  L++L+ NAG    P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLE 226

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             F  NHLGHF L  LL D + +++       R+I VSSE H        RF  IND SG
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSS-----PARVIVVSSESH--------RFTDINDSSG 273

Query: 194 SFQSSAL 200
               S L
Sbjct: 274 KLDLSRL 280

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  135 bits (340), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 106/187 (56%), Gaps = 13/187 (6%)

Query: 14  FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           +  S+TA E+  G D +G   +VTGA SGIG ETA+  AL G HV++  R++A   +   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 74  TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
            I++E   AKV+AM LDL+ L SV++FA  +  ++  L++L+ NA     P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             F  NHLGHF L  LL D + ++A       R+I VSSE H        RF  IND  G
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESH--------RFTDINDSLG 273

Query: 194 SFQSSAL 200
               S L
Sbjct: 274 KLDFSRL 280

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  132 bits (333), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 13/187 (6%)

Query: 14  FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           +  S+TA E+  G D +G   +VTGA SGIG ETA+  AL G HV++  R++A   +   
Sbjct: 107 YDGSTTALEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 74  TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
            I++E   AKV+A+ LDL+ L SV++FA  +  ++  L++L+ NA     P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
             F  NHLGHF L  LL D + ++A       R+I VSSE H        RF  IND  G
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESH--------RFTDINDSLG 273

Query: 194 SFQSSAL 200
               S L
Sbjct: 274 KLDFSRL 280

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1

 Score =  118 bits (295), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 99/168 (58%), Gaps = 1/168 (0%)

Query: 25  DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
           D  D +G  A+VTG++ GIG  TA  LA +G  V +  R+    + V + I  E+  +K+
Sbjct: 36  DIPDLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKI 95

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHF 144
             + LDL    SV   A  +  +  +L+IL+NNAGIM  PF L+KD  ELQ  TN+L H+
Sbjct: 96  RFLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQIQTNYLSHY 155

Query: 145 LLTNLLLDTMKKTARKS-GGEGRIINVSSEGHRLAYHEGIRFDKINDP 191
           L T LLL T+++TA +   G+ RI++V+S  +  A + GI F  +N P
Sbjct: 156 LFTELLLPTLRRTAEECRPGDVRIVHVASIAYLQAPYSGIYFPDLNLP 203

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2

 Score =  111 bits (277), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 8/183 (4%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G T IVTGA +GIG +TA  LA RG ++++  RD+   +   + I  E  +  V+A  LD
Sbjct: 38  GKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAKDIRGETLNHHVNARHLD 97

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           L+SL S+R FA++   +  +++ILINNAG+M  P   ++D  E+QF  NHLGHFLLTNLL
Sbjct: 98  LASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWTTEDGFEMQFGVNHLGHFLLTNLL 157

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLF 210
           LD +K +A       RIIN+SS  H +A H  I FD +N  +  + + A      L ++ 
Sbjct: 158 LDKLKASA-----PSRIINLSSLAH-VAGH--IDFDDLNWQTRKYNTKAAYCQSKLAIVL 209

Query: 211 FLQ 213
           F +
Sbjct: 210 FTK 212

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1

 Score =  110 bits (274), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 5/167 (2%)

Query: 11  PSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD 70
           P  +  ++ A E+  G D S    IVTGA SGIG ETAR  AL G HV++  R+ +    
Sbjct: 101 PKRYDGNTGALEILHGQDLSDKVIIVTGANSGIGFETARSFALHGAHVILACRNQSRASK 160

Query: 71  VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD 130
               I+ E   A+V+ + LDL+SL SVR FA  +      L++L+ NA +   P+ L++D
Sbjct: 161 AASLIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHVLVCNAAVCSQPWRLTED 220

Query: 131 NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL 177
             E  F   HLGHFLL  LL D ++ +A       R++ VSSE HR 
Sbjct: 221 GFESTFQICHLGHFLLVQLLQDVLRLSA-----PARVVVVSSESHRF 262

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score =  107 bits (268), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 8/162 (4%)

Query: 23  VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA 82
            T  +   G   ++TGA +GIG ETAR LA RG  V +  RD+  G+     I  +  ++
Sbjct: 31  CTTNVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS 90

Query: 83  KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLG 142
           +V   +LDLS   S+R FA  +  +  +L+ILINNAG+M  P+  + D  E  F  NHLG
Sbjct: 91  QVLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLG 150

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH---RLAYHE 181
           HFLLT LLL+ +K++A       R++N+SS  H   ++ +H+
Sbjct: 151 HFLLTYLLLERLKESA-----PARVVNLSSIAHLIGKIRFHD 187

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
225464515	313	PREDICTED: short-chain dehydrogenase TIC	0.884	0.610	0.821	1e-86
147792550	231	hypothetical protein VITISV_040853 [Viti	0.884	0.826	0.811	5e-85
359490488	313	PREDICTED: short-chain dehydrogenase TIC	0.912	0.629	0.766	2e-81
388510126	313	unknown [Lotus japonicus]	0.879	0.607	0.789	3e-81
449524040	252	PREDICTED: short-chain dehydrogenase TIC	0.870	0.746	0.787	5e-81
224134877	319	predicted protein [Populus trichocarpa]	0.902	0.611	0.812	5e-81
358248796	349	uncharacterized protein LOC100783465 [Gl	0.884	0.547	0.769	7e-81
449456313	313	PREDICTED: short-chain dehydrogenase TIC	0.870	0.600	0.781	2e-80
363814467	313	uncharacterized protein LOC100796920 [Gl	0.879	0.607	0.778	3e-80
225426446	315	PREDICTED: short-chain dehydrogenase TIC	0.879	0.603	0.768	4e-80

>gi|225464515|ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis vinifera] gi|302143828|emb|CBI22689.3| unnamed protein product [Vitis vinifera]

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/191 (82%), Positives = 170/191 (89%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F+RKGPSGFSASSTAEEVT GIDG+GLTAIVTGA+SGIGTET RVLALRGVHVVMGV
Sbjct: 1   MWWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R+++AGK+VKE IVKEIP+AKVDAMELDLSS+ASVR FASEYN     LNILINNAGIM 
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            P+MLSKDNIE+QFATNHLGHFLLTNLLLDTMKKT RKS  EGRI+NVSS  HR  Y EG
Sbjct: 121 VPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREG 180

Query: 183 IRFDKINDPSG 193
           IRFDKIND SG
Sbjct: 181 IRFDKINDKSG 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792550|emb|CAN65621.1| hypothetical protein VITISV_040853 [Vitis vinifera]

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 155/191 (81%), Positives = 169/191 (88%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F+RKG SGFS+SSTAEEVT GIDG+GLTAIVTGA+SGIGTET RVLALRGVHVVMGV
Sbjct: 1   MWPFSRKGASGFSSSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R+++AGK+VKE IVKEIP+AKVDAMELDLSS+ASVR FASEYN     LNILINNAGIM 
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            P+MLSKDNIE+QFATNHLGHFLLTNLLLDTMKKT RKS  EGRI+NVSS  HR  Y EG
Sbjct: 121 VPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREG 180

Query: 183 IRFDKINDPSG 193
           IRFDKIND SG
Sbjct: 181 IRFDKINDKSG 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490488|ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|147792549|emb|CAN65620.1| hypothetical protein VITISV_040852 [Vitis vinifera] gi|302143827|emb|CBI22688.3| unnamed protein product [Vitis vinifera]

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/197 (76%), Positives = 171/197 (86%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F R G SGFSASSTA EVT GIDG+GLTAIVTGA+SGIGTETARVLALRGVHVVM V
Sbjct: 1   MWWFGRNGASGFSASSTAVEVTHGIDGTGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++AAG++VKE I KEIP+AK+DAMELDLSS+ASVR FASE++     LN+LINNAG+M 
Sbjct: 61  RNMAAGREVKEAIAKEIPTAKIDAMELDLSSMASVRKFASEFSSSGLPLNLLINNAGLMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           TPFMLSKDNIELQFATNH+GHFLLTNLLL+TMKKTAR+S  EGRI+NVSS  HR +YHEG
Sbjct: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMKKTARESNKEGRIVNVSSRRHRFSYHEG 180

Query: 183 IRFDKINDPSGSFQSSA 199
           IRFD IND SG  + SA
Sbjct: 181 IRFDMINDQSGYNRLSA 197

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510126|gb|AFK43129.1| unknown [Lotus japonicus]

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/190 (78%), Positives = 166/190 (87%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W F++KGPSGFS+SSTAE+VT GIDG+GLTA+VTGA+SGIGTET RVLA RGVHV+MGV
Sbjct: 1   MWPFSKKGPSGFSSSSTAEQVTQGIDGTGLTAVVTGASSGIGTETTRVLAKRGVHVIMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R+ AAGKDVKETI+KE PSAKVDAMELDLSS+ SV+ FASEY      LNILINNAGIM 
Sbjct: 61  RNTAAGKDVKETILKENPSAKVDAMELDLSSMESVKKFASEYKSSGLPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            PFMLSKDN ELQFATNHLGHFLLTNLLLDTMKKT+R+S  EGRI+ VSSE HR AY EG
Sbjct: 121 CPFMLSKDNHELQFATNHLGHFLLTNLLLDTMKKTSRESKKEGRIVIVSSEAHRFAYSEG 180

Query: 183 IRFDKINDPS 192
           IRFDKIND S
Sbjct: 181 IRFDKINDQS 190

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524040|ref|XP_004169031.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus]

 Score =  306 bits (783), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 148/188 (78%), Positives = 167/188 (88%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +WLF RKGPSGFS+SSTAEEVTDGIDG+GLTAIVTGA+SGIG+ETARVLALRGVHV+MGV
Sbjct: 1   MWLFRRKGPSGFSSSSTAEEVTDGIDGTGLTAIVTGASSGIGSETARVLALRGVHVIMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++ AG++V+ETIVKE PSAK+DAMELDLSS+ASVR FAS+Y      LNILINNAGIM 
Sbjct: 61  RNLEAGRNVRETIVKENPSAKIDAMELDLSSMASVRKFASDYQSSGFPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           TPF LSKDNIE+QFATNH+GHFLLTNLLL+ MKKTA +S  EGRI+NVSSE HR  Y EG
Sbjct: 121 TPFGLSKDNIEVQFATNHIGHFLLTNLLLENMKKTAAESKKEGRIVNVSSEAHRYTYPEG 180

Query: 183 IRFDKIND 190
           IRFD IND
Sbjct: 181 IRFDGIND 188

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134877|ref|XP_002321927.1| predicted protein [Populus trichocarpa] gi|222868923|gb|EEF06054.1| predicted protein [Populus trichocarpa]

 Score =  306 bits (783), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 160/197 (81%), Positives = 175/197 (88%), Gaps = 2/197 (1%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +WLFNRKG SGFS+SSTAEEVT G+D SGLTAIVTGA+SGIGTETARVLALRGVHV+MGV
Sbjct: 1   MWLFNRKGSSGFSSSSTAEEVTHGVDASGLTAIVTGASSGIGTETARVLALRGVHVIMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++AAG+DVKE IVKEIPSAKVDAMELDLSSLASVRNFAS++N   H LN+LINNAGIM 
Sbjct: 61  RNMAAGRDVKEAIVKEIPSAKVDAMELDLSSLASVRNFASDFNSSGHPLNLLINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            PFMLSKDN+ELQFATN+LGHFLL NLLLDTMKKTA +S  EGRIINVSSE HR  Y EG
Sbjct: 121 PPFMLSKDNMELQFATNYLGHFLLANLLLDTMKKTALESNREGRIINVSSEFHRYPYPEG 180

Query: 183 IRFDKINDPSG--SFQS 197
           IRFDKIND SG   FQ+
Sbjct: 181 IRFDKINDQSGYKKFQA 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248796|ref|NP_001240197.1| uncharacterized protein LOC100783465 [Glycine max] gi|255644813|gb|ACU22908.1| unknown [Glycine max]

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 147/191 (76%), Positives = 167/191 (87%)

Query: 2   KLWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG 61
           K+W F+RKG SGFS+SSTAE+VT+GIDG+GLTAIVTGA+SGIGTET RVL+LRGVHV+MG
Sbjct: 36  KMWPFSRKGASGFSSSSTAEQVTEGIDGTGLTAIVTGASSGIGTETTRVLSLRGVHVIMG 95

Query: 62  VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           VR++ A KDVKET++KEIPSAKVDAMELDLSSL SV+ FASE+      LN+LINNAGIM
Sbjct: 96  VRNMLAAKDVKETLLKEIPSAKVDAMELDLSSLESVKKFASEFKSSGLPLNMLINNAGIM 155

Query: 122 GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE 181
             PF LSKD IELQFATNHLGHFLLTNLLLDTMKKT+R++  EGRI+NVSSE HR  Y E
Sbjct: 156 ACPFKLSKDKIELQFATNHLGHFLLTNLLLDTMKKTSRETKKEGRIVNVSSEAHRFTYSE 215

Query: 182 GIRFDKINDPS 192
           GIRFDKIND S
Sbjct: 216 GIRFDKINDES 226

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456313|ref|XP_004145894.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/188 (78%), Positives = 166/188 (88%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +WLF RKGPSGFS+SSTAEEVTDGIDG+GLTAIVTGA+SGIG+ETARVLALRGVHV+MGV
Sbjct: 1   MWLFRRKGPSGFSSSSTAEEVTDGIDGTGLTAIVTGASSGIGSETARVLALRGVHVIMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++ AG++V+ETIVKE PSAK+DAMELDLSS+ SVR FAS+Y      LNILINNAGIM 
Sbjct: 61  RNLEAGRNVRETIVKENPSAKIDAMELDLSSMVSVRKFASDYQSSGFPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           TPF LSKDNIE+QFATNH+GHFLLTNLLL+ MKKTA +S  EGRI+NVSSE HR  Y EG
Sbjct: 121 TPFGLSKDNIEVQFATNHIGHFLLTNLLLENMKKTAAESKKEGRIVNVSSEAHRYTYPEG 180

Query: 183 IRFDKIND 190
           IRFD IND
Sbjct: 181 IRFDGIND 188

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814467|ref|NP_001242868.1| uncharacterized protein LOC100796920 [Glycine max] gi|255638702|gb|ACU19656.1| unknown [Glycine max]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 148/190 (77%), Positives = 165/190 (86%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +WLF RKG SGFS+SSTAE+VT+GIDG+G TAIVTGA+SGIGTET RVLALRGVHV+MGV
Sbjct: 1   MWLFGRKGASGFSSSSTAEQVTEGIDGTGFTAIVTGASSGIGTETTRVLALRGVHVIMGV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++ A KDVKETI+KEIPSAKVDAMELDLSS+ SVR FASE+      LNILINNAGIM 
Sbjct: 61  RNMLAAKDVKETILKEIPSAKVDAMELDLSSMKSVRKFASEFKSSGLPLNILINNAGIMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            PF LSKD IELQFATNH+GHFLLTNLLLDT+KKT+R+S  EGRI+NVSSE HR AY EG
Sbjct: 121 CPFSLSKDKIELQFATNHIGHFLLTNLLLDTIKKTSRESKKEGRIVNVSSEAHRFAYSEG 180

Query: 183 IRFDKINDPS 192
           I FDKIND S
Sbjct: 181 ICFDKINDES 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426446|ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform 1 [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed protein product [Vitis vinifera]

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 146/190 (76%), Positives = 165/190 (86%)

Query: 3   LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
           +W+F RKGPSGFSA STAEEV  GIDG+GLTA+VTGA+SGIGTET+RVLAL GVHV+M V
Sbjct: 1   MWIFGRKGPSGFSACSTAEEVAQGIDGNGLTAVVTGASSGIGTETSRVLALHGVHVIMAV 60

Query: 63  RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
           R++ AG++VKETI+KEIP+AKVD MELDLSSL SVR FASEY      LN+LINNAG+M 
Sbjct: 61  RNVDAGRNVKETILKEIPTAKVDVMELDLSSLPSVRKFASEYKSLGLPLNLLINNAGVMA 120

Query: 123 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           TPF+LS DNIELQFATNHLGHFLLTNLLL+TMK TAR+SG EGRI+NVSSEGHR  Y EG
Sbjct: 121 TPFLLSHDNIELQFATNHLGHFLLTNLLLETMKNTARESGREGRIVNVSSEGHRFPYSEG 180

Query: 183 IRFDKINDPS 192
           I FDKIND S
Sbjct: 181 ICFDKINDES 190

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
TAIR|locus:2117969	322	Tic32-IVa "translocon at the i	0.898	0.602	0.651	9e-61
TAIR|locus:2123066	317	AT4G11410 [Arabidopsis thalian	0.870	0.593	0.654	3.2e-58
TAIR|locus:2181778	331	AT5G02540 [Arabidopsis thalian	0.847	0.552	0.535	2.6e-47
TAIR|locus:2040676	321	AT2G37540 [Arabidopsis thalian	0.861	0.579	0.510	9.1e-45
TAIR|locus:2170071	339	AT5G50130 [Arabidopsis thalian	0.875	0.557	0.465	1.3e-34
TAIR|locus:2134971	332	AT4G24050 [Arabidopsis thalian	0.902	0.587	0.413	2.8e-34
TAIR|locus:2019474	334	AT1G64590 [Arabidopsis thalian	0.791	0.511	0.450	1.3e-31
UNIPROTKB|O53613	303	Rv0068 "PROBABLE OXIDOREDUCTAS	0.712	0.508	0.391	5.9e-25
UNIPROTKB|Q5F389	414	WWOX "WW domain-containing oxi	0.796	0.415	0.367	9.7e-25
UNIPROTKB|E1C8R5	390	WWOX "WW domain-containing oxi	0.773	0.428	0.372	1.6e-24

TAIR|locus:2117969 Tic32-IVa "translocon at the inner envelope membrane of chloroplasts 32-IVa" [Arabidopsis thaliana (taxid:3702)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 127/195 (65%), Positives = 147/195 (75%)

Query:     3 LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
             +W F  KG SGFS+ STAEEVT G+DG+GLTAIVTGA+SGIG ETARVL+LRGVHVVM V
Sbjct:     1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query:    63 RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
             R+  +G  VKE IVK++P AK+D MELDLSS+ SVR FASEY      LN+LINNAGIM 
Sbjct:    61 RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query:   123 TPFMLSKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
              PFMLSKDNIELQFA              DTMK T+R+S  EGRI+N+SSE HR +Y EG
Sbjct:   121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query:   183 IRFDKINDPSGSFQS 197
             +RFDKIND S S+ S
Sbjct:   181 VRFDKINDKS-SYSS 194

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123066 AT4G11410 [Arabidopsis thaliana (taxid:3702)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 123/188 (65%), Positives = 142/188 (75%)

Query:     3 LWLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV 62
             +W F  KG SGFSA STAEEVT GIDG+GLTAIVTGA+SGIG ET RVLALRGVHVVM V
Sbjct:     1 MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAV 60

Query:    63 RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
             R+  +G  V++ I+KEIP AK+D M+LDLSS+ASVR+FASEY      LN+LINNAGIM 
Sbjct:    61 RNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMA 120

Query:   123 TPFMLSKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
              PF+LS DNIELQFA              + MKKTA +S  EGRI+ VSSEGHR AY EG
Sbjct:   121 CPFLLSSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREG 180

Query:   183 IRFDKIND 190
             ++FDKIND
Sbjct:   181 VQFDKIND 188

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2181778 AT5G02540 [Arabidopsis thaliana (taxid:3702)]

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 98/183 (53%), Positives = 128/183 (69%)

Query:     8 RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA 67
             R+GPSGF ++STAEEVT GID + LTAI+TG T GIG ETARVL+ RG HVV+G R++ A
Sbjct:    10 RRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHVVIGARNMGA 69

Query:    68 GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML 127
              ++ K  I+++  +A+V  ++LDLSS+ S++ F  E++  H  LN+LINNAG+M  P+ L
Sbjct:    70 AENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFCPYQL 129

Query:   128 SKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK 187
             S+D IELQFA              DTMK TA+ SG EGRI+NVSS  H   Y EGI+FD 
Sbjct:   130 SEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGIQFDS 189

Query:   188 IND 190
             IND
Sbjct:   190 IND 192

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2040676 AT2G37540 [Arabidopsis thaliana (taxid:3702)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 95/186 (51%), Positives = 127/186 (68%)

Query:     8 RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA 67
             +KG SGF ++STAE+VT  ID S LTAI+TG TSGIG E ARVLA+RG HV++  R+  A
Sbjct:    10 KKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAARNPKA 69

Query:    68 GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML 127
               + KE I++  P+A+VD +++D+SS+ SVR+F  ++   +  LNILINNAG+M  PF L
Sbjct:    70 ANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFCPFKL 129

Query:   128 SKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK 187
             ++D IE QFA              D MK TAR+SG +GRI+N+SS  H   Y EGI+F  
Sbjct:   130 TEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYTYSEGIKFQG 189

Query:   188 INDPSG 193
             INDP+G
Sbjct:   190 INDPAG 195

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2170071 AT5G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 89/191 (46%), Positives = 111/191 (58%)

Query:    10 GPSGFSASSTAEEVTDG--IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA 67
             GP+GF + STAE+VT       S LTAI+TG TSGIG ETARVLA RGV VVM VRD+  
Sbjct:    13 GPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRGVRVVMAVRDMKK 72

Query:    68 GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML 127
              + VKE I++E P A +   E+DLSSL+SV  F S++  Q   LNILINNAG+       
Sbjct:    73 AEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILINNAGVFSPNLEF 132

Query:   128 SKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK 187
             S++ IEL FA              + M  TA KSG EGRIIN+SS  H     +   F K
Sbjct:   133 SEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIHNWVKPDCFSFPK 192

Query:   188 INDPSGSFQSS 198
             +  P   +  +
Sbjct:   193 LLHPISRYNGT 203

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2134971 AT4G24050 [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 81/196 (41%), Positives = 118/196 (60%)

Query:     4 WLFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR 63
             +L    G SGF + STAEEVT+  D   +TA++TGATSGIG ETARVLA RG  ++   R
Sbjct:     7 YLLGAAGASGFGSKSTAEEVTENCDLRSITAVITGATSGIGAETARVLAKRGARLIFPAR 66

Query:    64 DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT 123
             ++ A ++ KE IV E P  ++  M+LDLSS+ASVRNF +++      LN+LINNAG +  
Sbjct:    67 NVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLINNAGKLAH 126

Query:   124 PFMLSKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI 183
                +S+D IE+ FA              + M +TA ++G +GRI+NV+S  H     + I
Sbjct:   127 EHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHGWFSGDLI 186

Query:   184 RFDK-INDPSGSFQSS 198
              + + I+ P   F ++
Sbjct:   187 EYLRLISQPKCQFDAT 202

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2019474 AT1G64590 [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 77/171 (45%), Positives = 100/171 (58%)

Query:     5 LFNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD 64
             L    GPSGF + STA+ VT   D   LTAI+TGATSGIG ETARVLA RG  +V+  R 
Sbjct:     8 LIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARS 67

Query:    65 IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP 124
             +   ++ K  I+ E P A++  M LDLSSL SVR F  ++   +  LNILINNAG     
Sbjct:    68 VKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINNAGKYAHK 127

Query:   125 FMLSKDNIELQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGH 175
               LS+D +E+ FA                M +TA ++G +GRI+NV+S  H
Sbjct:   128 HALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVH 178

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|O53613 Rv0068 "PROBABLE OXIDOREDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 63/161 (39%), Positives = 90/161 (55%)

Query:    28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
             D +G TA++TGA +G+G ETA  LA  G HVV+ VR++  GK     I +  P A+V+  
Sbjct:    11 DQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQ 70

Query:    88 ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXX 147
             ELDL+SLASVR  A++    H ++++LINNAG+M TP   + D  E+QF           
Sbjct:    71 ELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTPRQTTADGFEMQFGTNHLGHFALT 130

Query:   148 XXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI 188
                 D +   A    G  R++ +SS GHR+     I FD +
Sbjct:   131 GLLIDRLLPVA----GS-RVVTISSVGHRI--RAAIHFDDL 164

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|Q5F389 WWOX "WW domain-containing oxidoreductase" [Gallus gallus (taxid:9031)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 68/185 (36%), Positives = 103/185 (55%)

Query:    14 FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
             +  +STA E+  G D SG   I+TGA SGIG ETA+  AL G +V++  R+++ G D  +
Sbjct:   107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query:    74 TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
              I++E   AKV+AM LDL+SL SV+NFA  +  ++  L+IL+ NA I G+ + L++D +E
Sbjct:   167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query:   134 LQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
               F               D +++++       R++ VSSE HR        F +I D SG
Sbjct:   227 STFQVNHLGHFYLVQLLEDILRRSS-----PARVVVVSSESHR--------FTEIKDSSG 273

Query:   194 SFQSS 198
                 S
Sbjct:   274 KLDFS 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|E1C8R5 WWOX "WW domain-containing oxidoreductase" [Gallus gallus (taxid:9031)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 67/180 (37%), Positives = 102/180 (56%)

Query:    14 FSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
             +  +STA E+  G D SG   I+TGA SGIG ETA+  AL G +V++  R+++ G D  +
Sbjct:   107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query:    74 TIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
              I++E   AKV+AM LDL+SL SV+NFA  +  ++  L+IL+ NA I G+ + L++D +E
Sbjct:   167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query:   134 LQFAXXXXXXXXXXXXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG 193
               F               D +++++       R++ VSSE HR        F +I D SG
Sbjct:   227 STFQVNHLGHFYLVQLLEDILRRSS-----PARVVVVSSESHR--------FTEIKDSSG 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6RVV4	TIC32_PEA	1, ., 1, ., 1, ., -	0.7539	0.8796	0.6012	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	216
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-64
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	9e-58
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	3e-57
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	6e-51
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-40
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	5e-32
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	1e-31
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	8e-30
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-28
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-26
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	9e-26
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	1e-24
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	1e-22
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-22
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-22
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-22
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-20
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	7e-20
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-19
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-19
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-19
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	4e-19
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	3e-18
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-18
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-17
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-17
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-17
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-17
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	3e-17
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-16
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-16
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	7e-16
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	7e-16
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	9e-16
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-15
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-15
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-15
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-15
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-15
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-15
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-15
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	5e-15
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	9e-15
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	1e-14
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-14
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-14
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-14
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-14
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-14
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	4e-14
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	6e-14
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	8e-14
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	9e-14
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	1e-13
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-13
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-13
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-13
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-13
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-13
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-13
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	8e-13
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	9e-13
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-12
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	2e-12
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	3e-12
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-12
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	5e-12
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	5e-12
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	6e-12
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	7e-12
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-12
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	8e-12
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	9e-12
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	9e-12
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-11
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-11
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-11
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-11
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-11
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-11
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-11
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-11
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	5e-11
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	5e-11
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	5e-11
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	6e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-11
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	7e-11
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-10
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-10
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-10
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-10
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	4e-10
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-10
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-10
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	5e-10
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	6e-10
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	6e-10
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	7e-10
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	8e-10
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	8e-10
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-09
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-09
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-09
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	2e-09
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-09
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	3e-09
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-09
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-09
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-09
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-09
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-09
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	5e-09
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	5e-09
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	5e-09
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	5e-09
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	6e-09
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	6e-09
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	7e-09
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	8e-09
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	9e-09
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	9e-09
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-08
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-08
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-08
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	1e-08
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-08
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	3e-08
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-08
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	3e-08
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-08
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-08
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	4e-08
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	4e-08
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	4e-08
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	5e-08
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	5e-08
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	5e-08
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-08
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	6e-08
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	6e-08
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	6e-08
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	7e-08
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-08
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-08
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	8e-08
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	8e-08
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	9e-08
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-07
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-07
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-07
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-07
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-07
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-07
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-07
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	5e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	5e-07
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	5e-07
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	6e-07
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	6e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-07
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	6e-07
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-07
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	8e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-06
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-06
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-06
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-06
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-06
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-06
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-06
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-06
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-06
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-06
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	4e-06
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	5e-06
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	7e-06
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	8e-06
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	8e-06
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	9e-06
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-05
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-05
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-05
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-05
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	3e-05
pfam08659	181	pfam08659, KR, KR domain	3e-05
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	4e-05
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	8e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-04
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-04
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-04
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-04
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	3e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	3e-04
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	3e-04
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	4e-04
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	5e-04
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-04
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	9e-04
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	0.001
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	0.001
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	0.001
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.002
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	0.002
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	0.002
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	0.002
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	0.002
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	0.002
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	0.002
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	0.003
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	0.003
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.003
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	0.004
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  200 bits (510), Expect = 2e-64
 Identities = 80/148 (54%), Positives = 100/148 (67%), Gaps = 5/148 (3%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   ++TGA SGIG ETAR LA RG HV++  R+   G++    I KE  +AKV+ ++LD
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           LSSLASVR FA E+  +  +L+ILINNAGIM  P  L+KD  ELQFA N+LGHFLLTNLL
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLLTNLL 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLA 178
           L  +K +A       RI+NVSS  HR  
Sbjct: 121 LPVLKASA-----PSRIVNVSSIAHRAG 143

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  184 bits (469), Expect = 9e-58
 Identities = 76/163 (46%), Positives = 96/163 (58%), Gaps = 9/163 (5%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D SG  A+VTGA +G+G ETA  LA +G HVV+ VR++  GK     I    P A V   
Sbjct: 13  DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQ 72

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
           ELDL+SLASVR  A      + ++++LINNAG+M TP   + D  ELQF TNHLGHF LT
Sbjct: 73  ELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALT 132

Query: 148 NLLLDTMKKTARKSGGEG-RIINVSSEGHRLAYHEGIRFDKIN 189
            LLLD +          G R++ VSS GHR+     I FD + 
Sbjct: 133 GLLLDRLLPV------PGSRVVTVSSGGHRI--RAAIHFDDLQ 167

Length = 306

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  183 bits (466), Expect = 3e-57
 Identities = 79/178 (44%), Positives = 100/178 (56%), Gaps = 14/178 (7%)

Query: 12  SGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV 71
           SGF A+STAEEV  G D SG TAIVTG  SG+G ET R LA  G HV++  R     ++ 
Sbjct: 7   SGFGAASTAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA 66

Query: 72  KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN 131
               +  I   +V    LDL+ L SVR FA  +     +++ILINNAG+M  P     D 
Sbjct: 67  ----LAGIDGVEVV--MLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDG 120

Query: 132 IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN 189
            E QFATNHLGHF L NLL       A  +G   R++ +SS GHR +    IR+D  +
Sbjct: 121 WEAQFATNHLGHFALVNLLWP-----ALAAGAGARVVALSSAGHRRS---PIRWDDPH 170

Length = 315

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  165 bits (420), Expect = 6e-51
 Identities = 77/160 (48%), Positives = 105/160 (65%), Gaps = 10/160 (6%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G T I+TGA +GIG ETAR LA RG  V+M  RD+A  ++    I ++  + +V    LD
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           L+SL S+R FA+E+  +  +L++LINNAG+M  P+  ++D  E+QF  NHLGHFLLTNLL
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLL 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKIN 189
           LD +KK+A       RI+NVSS    LA+  G I FD +N
Sbjct: 121 LDLLKKSA-----PSRIVNVSS----LAHKAGKINFDDLN 151

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  139 bits (351), Expect = 1e-40
 Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 13/170 (7%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   I+TGA SGIG ETAR  AL G HV++  R+++        I++E   A+V+AM LD
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           L+SL SV+ FA  +  ++  L++L+ NA +   P+ L++D +E  F  NHLGHF L  LL
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLL 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSAL 200
            D ++++A       R+I VSSE H        RF  + D  G+   S L
Sbjct: 121 EDVLRRSAP-----ARVIVVSSESH--------RFTDLPDSCGNLDFSLL 157

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  117 bits (295), Expect = 5e-32
 Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           T ++TGA+SG+G   A+ LA RG  HVVM  RD    +   + +   +P      +  DL
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVG--MPKDSYSVLHCDL 60

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           +SL SVR F   +      L+ L+ NA +          + D  EL    NHLGHFLLTN
Sbjct: 61  ASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTN 120

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           LLL+ ++   R      RI+ V S  H      G
Sbjct: 121 LLLEDLQ---RSENASPRIVIVGSITHNPNTLAG 151

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  116 bits (293), Expect = 1e-31
 Identities = 67/183 (36%), Positives = 93/183 (50%), Gaps = 15/183 (8%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D SG  A+VTGA+ G+G   AR LA  G  V++ VR+ A G+     I   +P AK+   
Sbjct: 11  DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLR 70

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLL 146
            LDLSSLASV     +   +   +++LINNAG+M  P    + D  ELQF TNHLGHF L
Sbjct: 71  ALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFAL 130

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN-----DPSGSFQSSALL 201
           T  LL  ++       G  R+ + SS     A    I +D +N         ++  S + 
Sbjct: 131 TAHLLPLLR------AGRARVTSQSSIA---ARRGAINWDDLNWERSYAGMRAYSQSKIA 181

Query: 202 LLL 204
           + L
Sbjct: 182 VGL 184

Length = 313

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score =  112 bits (281), Expect = 8e-30
 Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 11/135 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELD 90
           T I+TGA+SG+G   A+ LA RG HV+M  R++       E   +E  IP      + +D
Sbjct: 8   TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA----EAAAQELGIPPDSYTIIHID 63

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFLL 146
           L  L SVR F  ++      L+ L+ NA +    +  P + S    EL  ATNHLGHFLL
Sbjct: 64  LGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEP-LRSPQGYELSMATNHLGHFLL 122

Query: 147 TNLLLDTMKKTARKS 161
            NLLL+ +KK+    
Sbjct: 123 CNLLLEDLKKSPAPD 137

Length = 322

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  105 bits (263), Expect = 7e-28
 Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 10/143 (6%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA+SGIG   AR LA  G  VV+  R+    + + E    E       A++ D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRN---EEALAELAAIEALGGNAVAVQADVSD 57

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 151
              V     E   +  +L+IL+NNAGI     +  L+ ++ +     N  G FLLT   L
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 152 DTMKKTARKSGGEGRIINVSSEG 174
             MKK      G GRI+N+SS  
Sbjct: 118 PHMKK-----QGGGRIVNISSVA 135

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  100 bits (250), Expect = 4e-26
 Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 11/144 (7%)

Query: 33  TAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTGA  GIG E  R LA  G   V++  RD+  G+   E +  E     V   +LD+
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE--GLSVRFHQLDV 59

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTN 148
           +  AS+   A     ++  L+IL+NNAGI          +++       TN  G   +T 
Sbjct: 60  TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQ 119

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            LL  +KK+       GRI+NVSS
Sbjct: 120 ALLPLLKKSP-----AGRIVNVSS 138

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score =  100 bits (252), Expect = 9e-26
 Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 11/143 (7%)

Query: 35  IVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           I+TGA+SG+G  TA+ LA  G  HVVM  RD    +   ++    +P      M LDL+S
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSA--GMPKDSYTVMHLDLAS 58

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNL 149
           L SVR F   +      L++L+ NA +       P   + D  EL   TNHLGHFLL+ L
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEP-TFTADGFELSVGTNHLGHFLLSRL 117

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
           LLD +KK+   S    R+I V S
Sbjct: 118 LLDDLKKSDYPS---KRLIIVGS 137

Length = 308

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 98.4 bits (245), Expect = 1e-24
 Identities = 54/136 (39%), Positives = 68/136 (50%), Gaps = 12/136 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMEL 89
           T I+TGA+SG+G   A+ LA  G  HV+M  RD        E   K +  P      M L
Sbjct: 5   TVIITGASSGLGLYAAKALAATGEWHVIMACRDF----LKAEQAAKSLGMPKDSYTIMHL 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFL 145
           DL SL SVR F  ++      L+ L+ NA +       P   + D  EL   TNHLGHFL
Sbjct: 61  DLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEP-RFTADGFELSVGTNHLGHFL 119

Query: 146 LTNLLLDTMKKTARKS 161
           L NLLLD +K +  K 
Sbjct: 120 LCNLLLDDLKNSPNKD 135

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 91.9 bits (228), Expect = 1e-22
 Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 5/144 (3%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G + ++TGA SGIG   A  +A RG  V M  R+    ++ ++ I  E  +  +    +D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           +S    V  F  E+  +  +L++LINNAG M     L++D +E  FATN LG ++LT  L
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHL 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEG 174
           +  ++K       + R+I VSS G
Sbjct: 121 IPVLEKEE-----DPRVITVSSGG 139

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 91.0 bits (226), Expect = 2e-22
 Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 13/159 (8%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVD 85
           +D SG  A+VTGA+SGIG   AR LA  G  VV+   R      +     +KE    +  
Sbjct: 1   MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAA 60

Query: 86  AMELDLSS-LASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHL 141
           A+  D+S    SV    +    +  +++IL+NNAGI G   P   L++++ +     N L
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
           G FLLT   L  MKK         RI+N+SS        
Sbjct: 121 GAFLLTRAALPLMKK--------QRIVNISSVAGLGGPP 151

Length = 251

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 90.8 bits (226), Expect = 2e-22
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 11/152 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TGA+SGIG  TAR LA  G  VV+  R     ++  E +  EI +    A+ L
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAKVVLAAR----REERLEALADEIGAGAALALAL 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           D++  A+V         +  +++IL+NNAG+  G P      D+ +    TN  G    T
Sbjct: 61  DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGT 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
             +L  M    RKS   G IIN+ S   R  Y
Sbjct: 121 RAVLPGMV--ERKS---GHIINLGSIAGRYPY 147

Length = 246

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 89.1 bits (222), Expect = 9e-22
 Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 9/145 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTGA+ GIG   A  LA  G  VV+   +  A + +   +       +   +  
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVF 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S  A+VR            L+IL+NNAGI        +S+++ +     N  G F + 
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  M K        GRI+N+SS
Sbjct: 122 RAALPPMIKA-----RYGRIVNISS 141

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 85.4 bits (212), Expect = 3e-20
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 12/142 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             ++TG +SGIG   A  LA +G  V+   R+      ++        + +V  +ELD++
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNP---DKLESLGELLNDNLEV--LELDVT 56

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNLL 150
              S++    E   +  ++++L+NNAG     P    S + +   F  N  G   +T   
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           L  M    RK G  GRI+NVSS
Sbjct: 117 LPLM----RKQGS-GRIVNVSS 133

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 84.6 bits (210), Expect = 7e-20
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 8/144 (5%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TA++TGA+SGIG E A+ LA RG ++++  R     + + + +  +    +V+ +  DLS
Sbjct: 8   TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLS 66

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
              ++     E   +   +++L+NNAG    G    LS D  E     N L    LT  +
Sbjct: 67  DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAV 126

Query: 151 LDTMKKTARKSGGEGRIINVSSEG 174
           L  M +      G G IIN+ S  
Sbjct: 127 LPGMVE-----RGAGHIINIGSAA 145

Length = 265

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 83.8 bits (208), Expect = 1e-19
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           I+TGA+SGIG E A  LA  G  +V+  R     ++VK     E+ +     + LD+S L
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMSDL 65

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLTNLLL 151
                   E       L+ILINNAG +    +    +I++       N+ G   LT   L
Sbjct: 66  EDAEQVVEEALKLFGGLDILINNAG-ISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAAL 124

Query: 152 DTMKKTARKSGGEGRIINVSS 172
             + +  R     G I+ VSS
Sbjct: 125 PHLIE--RSQ---GSIVVVSS 140

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 14/150 (9%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDA 86
              G  AIVTGA+ GIG   A +LA  G  VV+    +  A +++    ++EI     DA
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQEL----LEEIKEEGGDA 57

Query: 87  M--ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLG 142
           +  + D+SS   V N   +   +  +++IL+NNAGI        ++ +  +     N  G
Sbjct: 58  IAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTG 117

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             LLT   L  M K  RKSG    I+N+SS
Sbjct: 118 VMLLTRYALPYMIK--RKSGV---IVNISS 142

Length = 247

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 82.0 bits (203), Expect = 3e-19
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G T ++TG TSGIG   AR     G  V++  R     ++      KE+P+     + L
Sbjct: 4   TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRR----EERLAEAKKELPNIH--TIVL 57

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK-----DNIELQFATNHLGHF 144
           D+    SV   A     ++  L+ILINNAGI   P  L       D  + +  TN +G  
Sbjct: 58  DVGDAESVEALAEALLSEYPNLDILINNAGIQ-RPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
            L    L  +KK       E  I+NVSS
Sbjct: 117 RLIKAFLPHLKKQ-----PEATIVNVSS 139

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 82.8 bits (205), Expect = 4e-19
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTGA+SG G  T   LA +G  V+  +R+    +++     +      +   +LD++
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLL 150
              S+ NF      +  ++++L+NNAG     F+  +  +    QF TN  G   +T  +
Sbjct: 65  DQNSIHNFQLVLK-EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAV 123

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           L  M+K        G+IIN+SS
Sbjct: 124 LPYMRKQ-----KSGKIINISS 140

Length = 280

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 78.0 bits (193), Expect = 3e-18
 Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 16/145 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMEL 89
           T ++TG T G+G   AR LA  G  H+V+  R   A       +V E+ +  A+V     
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGA--AELVAELEALGAEVTVAAC 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++   ++    +        L+ +++NAG+   G    L+ +  E   A    G + L 
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLH 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            L  D            G  +  SS
Sbjct: 120 ELTRDL---------DLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 79.1 bits (196), Expect = 5e-18
 Identities = 51/147 (34%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A+VTGA+ GIG   A  LA +G +VV+      AG    E +V EI +   K  A+
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG---AEALVAEIGALGGKALAV 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFL 145
           + D+S   SV     E   +   ++IL+NNAGI      M + +++ +    TN  G F 
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           LT  +   M K        GRIIN+SS
Sbjct: 121 LTKAVARPMMK-----QRSGRIINISS 142

Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 78.0 bits (193), Expect = 1e-17
 Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 10/153 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA  GIG   A  LA  G  V++            E +      A+  A ++
Sbjct: 5   EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKAR--ARQV 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+   A+++   +       +L+IL+ NAGI   TPF  +  +  E     N  G FLLT
Sbjct: 63  DVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLT 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-EGHRLAY 179
              L  + +      G GRI+  SS  G R+ Y
Sbjct: 123 QAALPALIR-----AGGGRIVLTSSVAGPRVGY 150

Length = 251

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 24/149 (16%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTGA+ GIG   A  LA  G  V++         ++V E +  +    K   +  D+S
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL--KAYGVKALGVVCDVS 58

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHLGH 143
               V+    E   +   ++IL+NNAGI       ++DN+     E  +     TN  G 
Sbjct: 59  DREDVKAVVEEIEEELGPIDILVNNAGI-------TRDNLLMRMKEEDWDAVIDTNLTGV 111

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           F LT  +L  M K  R     GRIIN+SS
Sbjct: 112 FNLTQAVLRIMIK-QRS----GRIINISS 135

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 77.6 bits (192), Expect = 2e-17
 Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 17/142 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+SGIG  TA  LA  G  V    R+ A             P   V+ +ELD++
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLELDVT 55

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
             ASV+    E   +  ++++L+NNAG+   G     S    +  F TN  G   +T  +
Sbjct: 56  DDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAV 115

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           L  M+       G GRIIN+SS
Sbjct: 116 LPHMRAQ-----GSGRIINISS 132

Length = 270

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 77.0 bits (190), Expect = 3e-17
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 16/146 (10%)

Query: 34  AIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            ++TGA+ GIG E  R L  RG   V+   RD +A  ++          +++  +ELD++
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH---SRLHILELDVT 57

Query: 93  SL--ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS---KDNIELQFATNHLGHFLLT 147
                S    A         L++LINNAGI+ +    S    +++   F  N LG  LLT
Sbjct: 58  DEIAESAEAVAERLGDAG--LDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSE 173
              L  + K     G   +IIN+SS 
Sbjct: 116 QAFLPLLLK-----GARAKIINISSR 136

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 76.8 bits (190), Expect = 3e-17
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 9/142 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+ GIG   A  LA  G  V +  R   A  +  E I          A+E D+S
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADVS 59

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLTNLL 150
              +V     +   +   ++IL+NNAGI     ++  S+++ +     N  G F +T  +
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAV 119

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           +  M K  R+S   GRIIN+SS
Sbjct: 120 IRAMIK--RRS---GRIINISS 136

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 75.7 bits (186), Expect = 1e-16
 Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 10/150 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTG + GIG  TA +LA  G  V V   +++ A ++V   I +     K   ++ D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADI 60

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTN 148
           S    V    +  +     L  L+NNAGI+ T      L+ + I    +TN  G+FL   
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR 120

Query: 149 LLLDTMKKTARKSGGE-GRIINVSSEGHRL 177
              + +K+ A K GG  G I+NVSS   RL
Sbjct: 121 ---EAVKRMALKHGGSGGAIVNVSSAASRL 147

Length = 247

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.1 bits (183), Expect = 3e-16
 Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 16/159 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAME 88
            G  A+VTGA  G+G   A  LA  G  VV+  R D  A +++ E +       +  A++
Sbjct: 5   MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQ 62

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
            D++  A++    +    +  +++IL+NNAGI    P   +S D  +     N  G F L
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHL 122

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEG------HRLAY 179
              ++  M+K        GRI+N+SS         R  Y
Sbjct: 123 LRAVVPPMRKQ-----RGGRIVNISSVAGLPGWPGRSNY 156

Length = 249

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 72.8 bits (179), Expect = 7e-16
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 13/142 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+ GIG E AR LA  G  V +G+R+     D+            V+A+  D  
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPE---DLAALSASG---GDVEAVPYDAR 55

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 150
                R        +  ++++L++NAGI   T     S   +E  F+ N +    LT  L
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           L  +++        GR++ ++S
Sbjct: 116 LPALREAGS-----GRVVFLNS 132

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 7e-16
 Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 13/154 (8%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
            D  G    +TG   GIG  TAR LA  G  V +G  D A  K+       E+    V  
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKET----AAELG--LVVG 54

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN--IELQFATNHLGHF 144
             LD++  AS   F          +++L+NNAG+M     L + +         N  G  
Sbjct: 55  GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVI 114

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA 178
           L + L    M    R   G G ++NV+S   ++ 
Sbjct: 115 LGSKLAAPRM--VPR---GRGHVVNVASLAGKIP 143

Length = 273

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 73.1 bits (180), Expect = 9e-16
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 9/150 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TGA+SGIG  TAR  A  G  +++  R     +++ + +  + P  KV  ++LD+S
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFP-VKVLPLQLDVS 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI-MGTP--FMLSKDNIELQFATNHLGHFLLTNL 149
              S+         +   ++IL+NNAG+ +G         ++ E    TN  G   +T L
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTRL 120

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
           +L  M         +G IIN+ S   R  Y
Sbjct: 121 ILPIMIAR-----NQGHIINLGSIAGRYPY 145

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 72.9 bits (179), Expect = 1e-15
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 16/145 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
            A++TGA++GIG  +A  LA  G +V+    DIA    V ET V +I S   K  A  +D
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYVLAV--DIAEA--VSET-VDKIKSNGGKAKAYHVD 62

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLT 147
           +S    V++FASE   Q  ++++L NNAG+      + +  +++     A +  G FL+T
Sbjct: 63  ISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMT 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            +LL  M +        G IIN SS
Sbjct: 123 KMLLPLMMEQG------GSIINTSS 141

Length = 272

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 72.9 bits (179), Expect = 1e-15
 Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 7/151 (4%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           I+  G  A+VTGA+SG+G   A+VLA  G  VV+  R +   K+++  I  E  +A V  
Sbjct: 5   INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV-- 62

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHF 144
           + LD++   S++   +    +   ++IL+NN+G+  T  ++  +  + +  F TN  G F
Sbjct: 63  VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAF 122

Query: 145 LLTNLLLDTMKKTARKSGG---EGRIINVSS 172
            +   +   M   A+ +G     GRIIN++S
Sbjct: 123 FVAQEVAKRMIARAKGAGNTKPGGRIINIAS 153

Length = 258

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 3e-15
 Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 11/143 (7%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMELDL 91
             ++TG  SGIG   A   A RG  VV  + DI      +ET         KV   + D+
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVV--ILDINEKG-AEETANNVRKAGGKVHYYKCDV 57

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNL 149
           S    V   A +   +   + ILINNAG++ G   + L  + IE  F  N L HF  T  
Sbjct: 58  SKREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKA 117

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
            L  M +        G I+ ++S
Sbjct: 118 FLPDMLERNH-----GHIVTIAS 135

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 71.6 bits (176), Expect = 3e-15
 Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 8/143 (5%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           AI+TG  SGIG  TA++L  +G  V   + D          +    P  K   ++ D++S
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVA--ILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLS----KDNIELQFATNHLGHFLLTNL 149
              +     +   +  +++ILINNAGI+     L         E     N  G    T L
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
            L  M K     G  G I+N+ S
Sbjct: 121 ALHYMDKNKGGKG--GVIVNIGS 141

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 71.5 bits (176), Expect = 3e-15
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 9/144 (6%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VT A+SGIG   AR LA  G  V +  R+    +     +      A V A+  D
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL--RAGGAGVLAVVAD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTN 148
           L+    +     +      +++IL+NNAG    G    L+ ++    F    L    +  
Sbjct: 59  LTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVR 118

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            +L  MK+      G GRI+N+SS
Sbjct: 119 AVLPGMKER-----GWGRIVNISS 137

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.8 bits (177), Expect = 3e-15
 Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AIVTGA+SGIG   AR  A  G  VV+  R+  A + V   I+      +  A+  
Sbjct: 4   EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG---GRAIAVAA 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFLL 146
           D+S  A V    +    +   ++IL+NNAG      P + + +   +  FA N    +L 
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEG 174
           T   +  M    R  GG G I+NV+S  
Sbjct: 121 TQAAVPAM----RGEGG-GAIVNVASTA 143

Length = 251

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 3e-15
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 15/156 (9%)

Query: 25  DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
             +D +G   ++TGA+SGIG   A   A RG  VV     +A  +D+ + +   I  A  
Sbjct: 34  QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVA----VARREDLLDAVADRITRAGG 89

Query: 85  DAMEL--DLSSLASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKD---NIELQFAT 138
           DAM +  DLS L +V    ++   +   ++ILINNAG  +  P   S D   ++E     
Sbjct: 90  DAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVL 149

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG 174
           N+     L   L   M    R   G+G IINV++ G
Sbjct: 150 NYYAPLRLIRGLAPGM--LER---GDGHIINVATWG 180

Length = 293

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 5e-15
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 9/145 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTGA  G+G   A  LA  G  V       A  +++   +  E    +  A+  
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL--EAAGGRAHAIAA 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           DL+  ASV+ F          L+ L+NNAGI  +     L  D  +     N  G FL+ 
Sbjct: 64  DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLML 123

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  ++ + R     GRI+N++S
Sbjct: 124 RAALPHLRDSGR-----GRIVNLAS 143

Length = 250

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 70.8 bits (174), Expect = 9e-15
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 21/156 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+SGIG  TAR LA +G  V    R +   +D+         S  V  + LD++
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA--------SLGVHPLSLDVT 56

Query: 93  SLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
             AS++        +  ++++L+NNAG    G    +  D    QF  N  G   LT L+
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLV 116

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLA------YH 180
           L  M+         GRIIN+SS G ++       YH
Sbjct: 117 LPHMRAQ-----RSGRIINISSMGGKIYTPLGAWYH 147

Length = 273

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 70.1 bits (172), Expect = 1e-14
 Identities = 50/143 (34%), Positives = 66/143 (46%), Gaps = 16/143 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           + ++TG +SGIG E A  L  RG  V+   R        K   V  + S     + LDL 
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACR--------KPDDVARMNSLGFTGILLDLD 55

Query: 93  SLASVRNFASEY-NIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
              SV   A E   +  ++L  L NNAG  + G    +S+  +E QF+TN  G   LT L
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTML 115

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
           LL  M        GEGRI+  SS
Sbjct: 116 LLPAM-----LPHGEGRIVMTSS 133

Length = 256

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 69.7 bits (171), Expect = 2e-14
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA   IG    + L   G  +++   +  A + +KE +   +   +V A+EL
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEEL-TNLYKNRVIALEL 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFM-LSKDNIELQFATNHLGHF 144
           D++S  S++     Y  +  +++ILINNA       G+ F     +        N  G F
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L +   +   KK      G+G IIN++S
Sbjct: 120 LCSQAFIKLFKKQ-----GKGSIINIAS 142

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 14/147 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM-- 87
           +G  A+VTGA+ GIG   A+ LA  G  VV+   + A+ K   E +V EI +A   A+  
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVV---NYASSKAAAEEVVAEIEAAGGKAIAV 58

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL--QFATNHLGHFL 145
           + D+S  + V             ++IL+NNAG+M    +      E    F  N  G F 
Sbjct: 59  QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFF 118

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
                   +++ A++    GRIIN+SS
Sbjct: 119 -------VLQEAAKRLRDGGRIINISS 138

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.8 bits (171), Expect = 3e-14
 Identities = 55/156 (35%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA- 82
           T+  D SG  A+VTGA +G+G   A  LA  G  VV  V D+A+  D  + +  EI +A 
Sbjct: 5   TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVV--VNDVASALDASDVL-DEIRAAG 61

Query: 83  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP--FMLSKDNIELQFATN 139
            K  A+  D+S  A+         +    L+I++NNAGI      F +S +  +   A +
Sbjct: 62  AKAVAVAGDISQRATADELV-ATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVH 120

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGE--GRIINVSSE 173
             GHFLLT       +  A+ +GG   GRI+N SSE
Sbjct: 121 LRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSE 156

Length = 306

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 69.4 bits (170), Expect = 3e-14
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAME 88
           SG  AI+TG++SGIG  TA + A  G  + +  RD    ++ +++ ++  +   K+  + 
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLL 146
            DL+         S    +  +L+IL+NNAG    G       +  +     N      L
Sbjct: 62  ADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYL 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T L +  + KT      +G I+NVSS
Sbjct: 122 TKLAVPHLIKT------KGEIVNVSS 141

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 69.1 bits (170), Expect = 3e-14
 Identities = 50/153 (32%), Positives = 68/153 (44%), Gaps = 25/153 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA SGIG E A  LA  G  VV+   +  A     E + K     K   + +
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAM 60

Query: 90  DLSSLASVRNFASEYNIQHH-QLNILINNAGIMGTPFMLSKDNIELQFATN--------H 140
           D++   ++ N   +Y ++    ++IL+NNAGI           IE  F T          
Sbjct: 61  DVTDEEAI-NAGIDYAVETFGGVDILVNNAGIQHV------APIE-DFPTEKWKKMIAIM 112

Query: 141 L-GHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L G FL T   L  MK       G GRIIN++S
Sbjct: 113 LDGAFLTTKAALPIMKAQ-----GGGRIINMAS 140

Length = 258

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 68.6 bits (168), Expect = 4e-14
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA SG G   AR  A  G  VV+   +    + V      +I  A + A++ D
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERV----AADIGEAAI-AIQAD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLT 147
           ++  A V         +  +L+IL+NNAGI      +    ++  +  FA N    +L  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEG 174
             L+  M++      G G IIN++S  
Sbjct: 120 QALVPHMEE-----QGGGVIINIASTA 141

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 68.2 bits (167), Expect = 6e-14
 Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 9/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
            G  A+VTG+TSGIG   AR LA  G ++V+ G  D A  + V+  +  +    KV    
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAK-HGVKVLYHG 59

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLL 146
            DLS  A++ +  +    Q   ++IL+NNAGI     +     +  +   A N    F  
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHT 119

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T L L  MKK      G GRIIN++S
Sbjct: 120 TRLALPHMKKQ-----GWGRIINIAS 140

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 8e-14
 Identities = 47/153 (30%), Positives = 62/153 (40%), Gaps = 11/153 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            GL  +VTG  SGIG   A   A  G  V +     AA           +P AKV A   
Sbjct: 10  DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA----LAATAARLPGAKVTATVA 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLL 146
           D++  A V         +   L++L+NNAGI G       ++ +  E   A N  G F  
Sbjct: 66  DVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYF 125

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
               +  +K  A   GG   II +SS   RL Y
Sbjct: 126 ARAAVPLLK--ASGHGGV--IIALSSVAGRLGY 154

Length = 264

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 67.5 bits (165), Expect = 9e-14
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 19/149 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G T ++TG  SGIG   A+     G  V++  R+     + K     E P   +     
Sbjct: 4   TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAK----AENPE--IHTEVC 57

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGH 143
           D++   S R        ++  LN+LINNAGI       G   +L  D+ E + ATN L  
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLL--DDAEQEIATNLLAP 115

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             LT LLL  + +       E  IINVSS
Sbjct: 116 IRLTALLLPHLLRQP-----EATIINVSS 139

Length = 245

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 1e-13
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VTGA  GIG   AR  A  G  V +   D A  +     I +++  A+V A+  D
Sbjct: 7   GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPAD 66

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           ++  ASV    +        L++L+NNAGI     P  ++ ++    FA +  G +    
Sbjct: 67  VTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCR 126

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            +L  M    R   G G I+N++S
Sbjct: 127 AVLPGM--VER---GRGSIVNIAS 145

Length = 260

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 67.1 bits (164), Expect = 1e-13
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 17/148 (11%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AI+TG  SGIG  TAR+ A  G  VV  + DI    D  + +  E+    +  +  D
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVV--IADID--DDAGQAVAAELGDPDISFVHCD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTP--FML--SKDNIELQFATNHLGHFLL 146
           ++  A VR        +  +L+I+ NNAG++G P   +L  S +  E     N  G FL 
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL- 118

Query: 147 TNLLLDTMKKTARKSGGEGR--IINVSS 172
                   K  AR      +  I++V+S
Sbjct: 119 ------GTKHAARVMIPAKKGSIVSVAS 140

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 68.0 bits (166), Expect = 2e-13
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 2/131 (1%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +   A VTG   GIG ETAR LA  G HVV+   ++ A + V   I  +  + +  A+++
Sbjct: 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKM 472

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE--LQFATNHLGHFLLT 147
           D++   +V+   ++  + +  ++I++NNAGI  +         E  L       G+FL+ 
Sbjct: 473 DVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVA 532

Query: 148 NLLLDTMKKTA 158
                 M++  
Sbjct: 533 REAFRQMREQG 543

Length = 676

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 17/148 (11%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G TA+VTGA SGIG   AR LA  G +VV  V D           V       V  +  D
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVV--VNDFGEEGAEAAAKVAGDAGGSVIYLPAD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGT------PFMLSKDNIELQFATNHLGHF 144
           ++    + +  +    +   L+IL+NNAGI         P     ++ +   A      F
Sbjct: 59  VTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPP----EDWDRIIAVMLTSAF 114

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
                 L  MKK      G GRIIN++S
Sbjct: 115 HTIRAALPHMKK-----QGWGRIINIAS 137

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 13/147 (8%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--E 88
           G  A+VTGA+SGIG   A  LA  G +VV+  R   + +D  E +V+EI +    A+  +
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYR---SKEDAAEEVVEEIKAVGGKAIAVQ 59

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFL 145
            D+S    V         +   L+IL+NNAG+ G       ++ ++       N  G FL
Sbjct: 60  ADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQG-DASSHEMTLEDWNKVIDVNLTGQFL 118

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
                +   +K+  K    G+IIN+SS
Sbjct: 119 CAREAIKRFRKSKIK----GKIINMSS 141

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 17/151 (11%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
           G   ++TGA+SGIG  TA  +A  G  V +  R+   G+ + E  V EI +      A  
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARN---GEALDEL-VAEIRAKGGTAHAYT 426

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKD---NIELQFATNHLGH 143
            DL+  A+V +   +   +H  ++ L+NNAG  I  +    S D   + E   A N+ G 
Sbjct: 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRS-VENSTDRFHDYERTMAVNYFGA 485

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSEG 174
             L   LL  M    R+    G ++NVSS G
Sbjct: 486 VRLILGLLPHM--RERRF---GHVVNVSSIG 511

Length = 657

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 65.4 bits (160), Expect = 5e-13
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 14/146 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRG-VHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELD 90
             I+TGA+ GIG   A  L  RG   VV+ + R       ++E   +  P  +V  ++ D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEE---PLQELKEELRPGLRVTTVKAD 57

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLL 146
           LS  A V            + ++LINNAG +G P      +  D ++  F  N      L
Sbjct: 58  LSDAAGVEQLLEAIRKLDGERDLLINNAGSLG-PVSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T+ LL    +  +K G +  ++NVSS
Sbjct: 117 TSTLL----RAFKKRGLKKTVVNVSS 138

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 65.0 bits (159), Expect = 8e-13
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 9/141 (6%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            +VTGA  GIG   AR LA  G   V  V D    + ++               +LD++ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGA-RVAAV-DRNFEQLLELVADLRRYGYPFATYKLDVAD 58

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
            A+V         ++  +++L+N AGI  +G    LS ++ +  FA N  G F ++  + 
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 152 DTMKKTARKSGGEGRIINVSS 172
             MK   R+SG    I+ V S
Sbjct: 119 PRMK--RRRSGA---IVTVGS 134

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 64.8 bits (158), Expect = 9e-13
 Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 24/150 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTGA  GIG+  AR L   G  V+          KD  E         +V   ELD+
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFE--EYGFTEDQVRLKELDV 61

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFA---------TNHLG 142
           +         +E   +   ++IL+NNAGI       ++D++  + +         TN   
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGI-------TRDSVFKRMSHQEWNDVINTNLNS 114

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            F +T  L   M +      G GRIIN+SS
Sbjct: 115 VFNVTQPLFAAMCEQ-----GYGRIINISS 139

Length = 245

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 18/149 (12%)

Query: 26  GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 85
            +D SG T  VTGA  GIG   A      G  V+        G D      ++ P     
Sbjct: 3   AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVI--------GFDQAFLTQEDYP---FA 51

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGH 143
              LD+S  A+V         +   L++L+N AGI  MG    LS ++ +  FA N  G 
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           F L   ++   +   ++SG    I+ V S
Sbjct: 112 FNLFRAVMPQFR--RQRSGA---IVTVGS 135

Length = 252

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 9/145 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTG+  G+G E AR LA  G HV++  R+ A  +     +     +A  +A+  
Sbjct: 10  AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAA--EALAF 67

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           D++   +V    +  + +H +L+IL+NN G      +  L    I     T+ +   LL+
Sbjct: 68  DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLS 127

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            L    MK+      G GRII ++S
Sbjct: 128 RLAAQRMKR-----QGYGRIIAITS 147

Length = 256

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.9 bits (156), Expect = 2e-12
 Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 9/144 (6%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A++TGA  GIG   A  LA  GV+V +  R     K V E +       KV     D
Sbjct: 7   GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATAD 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           +S    V     +   +   ++ILINNAGI   G    L     E     N +G +  T 
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATR 124

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            +L +M +  R+SG    IIN+SS
Sbjct: 125 AVLPSMIE--RQSGD---IINISS 143

Length = 239

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 63.9 bits (156), Expect = 3e-12
 Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 21/147 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TGA SG G E A  LA +G +V+ GV+           I  ++ + + +A    L+
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQ-----------IAPQVTALRAEAARRGLA 52

Query: 93  SLASVRNFASEYNIQH---HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
                 +     +        +++L+NNAGI   G    +  + +   F TN  G   LT
Sbjct: 53  LRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELT 112

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEG 174
              +  M   AR     G+++  SS  
Sbjct: 113 QGFVRKM--VARGK---GKVVFTSSMA 134

Length = 257

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 63.3 bits (154), Expect = 3e-12
 Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDA 86
            G  A+VTGA+ GIG   AR L   G+ VV   R +    D  E +  E  SA    +  
Sbjct: 5   RGRVALVTGASVGIGAAVARALVQHGMKVVGCARRV----DKIEALAAECQSAGYPTLFP 60

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHF 144
            + DLS+   + +  S    QH  +++ INNAG+     +LS      +  F  N L   
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALS 120

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRL 177
           + T     +MK   R    +G IIN++S  GHR+
Sbjct: 121 ICTREAYQSMK--ERNV-DDGHIININSMSGHRV 151

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 63.2 bits (154), Expect = 5e-12
 Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 46/181 (25%)

Query: 34  AIVTGATSGIGTETA-RVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DA 86
            +VTGA SG+G     R+LA       + +++  R++   +     ++   P A+V  D 
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPF--------------------- 125
           + +DLS++ SV   A E   ++ +L+ L  NAGIM  P                      
Sbjct: 64  VLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTNP 123

Query: 126 --------MLSK------DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS 171
                   +LS+      D +   F TN  GH+ L   L   +     +S G  +II  S
Sbjct: 124 TYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLL----CRSDGGSQIIWTS 179

Query: 172 S 172
           S
Sbjct: 180 S 180

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 14/154 (9%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
           T+  D +G  A+VTGA+ GIG   A++LA +G HV++  R +   + V + IV      K
Sbjct: 1   TNLFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGK 58

Query: 84  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPF---MLSKDNIELQ--FAT 138
            +A+   +  +  +    +    +H +L+IL+NNA     P+   +L  D    Q     
Sbjct: 59  AEALACHIGEMEQIDALFAHIRERHGRLDILVNNAA--ANPYFGHILDTDLGAFQKTVDV 116

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           N  G+F ++      MK+      G G I+NV+S
Sbjct: 117 NIRGYFFMSVEAGKLMKE-----QGGGSIVNVAS 145

Length = 252

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 6e-12
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 17/152 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TGA SGIG   A      G  VV+     A  +     I          A+ L
Sbjct: 5   QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSL 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++   S+    +    +   ++IL NNA +  M     +S+D+ +  FA N  G F   
Sbjct: 60  DVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFF-- 117

Query: 148 NLLLDTMKKTAR---KSGGEGRIINVSSEGHR 176
                 M+  AR   + G  G+IIN++S+  R
Sbjct: 118 -----LMQAVARHMVEQGRGGKIINMASQAGR 144

Length = 257

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 62.4 bits (152), Expect = 7e-12
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 91
           A+VTG + GIG   A  LA RG  VV+  R     KD    +  EI      A+ +  D+
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRK---SKDAAAEVAAEIEELGGKAVVVRADV 57

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNL 149
           S    V    +    +  +L++L++NA      P   L+  + + +  TN          
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQ 117

Query: 150 LLDTMKKTARKSGGEGRIINVSSEG 174
               M++      G GRI+ +SS G
Sbjct: 118 AAKLMRER-----GGGRIVAISSLG 137

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 62.2 bits (151), Expect = 7e-12
 Identities = 50/152 (32%), Positives = 68/152 (44%), Gaps = 13/152 (8%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
           G  A+VTGA+SGIG  TAR LA  G  V +  R      D  E +  E+ +   K   +E
Sbjct: 3   GKVALVTGASSGIGEATARALAAEGAAVAIAARR----VDRLEALADELEAEGGKALVLE 58

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLL 146
           LD++    V            +L+IL+NNAGIM    +   D  +      TN LG    
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYT 118

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLA 178
           T+  L       R     G I+N+SS   R+A
Sbjct: 119 THAALPHHL--LRNK---GTIVNISSVAGRVA 145

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 62.1 bits (151), Expect = 8e-12
 Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 21/174 (12%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           +TG++ G+G   AR L  +G  VV+  R      D K       P A    +  DLSSLA
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAK----AACPGAAG-VLIGDLSSLA 66

Query: 96  SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD-NIELQFATNHLGHFLLTNLLLDTM 154
             R  A + N      + +I+NAGI+  P   + D  I    A N L  ++LT L+    
Sbjct: 67  ETRKLADQVNAIGR-FDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALI--RR 123

Query: 155 KKTARKSGGEGRIINVSSEGHR--LAYHEGIR-FDKINDPSGSFQSSALLLLLL 205
            K         R+I +SS  HR   A  + I  F++  + S ++  S L +L L
Sbjct: 124 PK---------RLIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHVLTL 168

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 9e-12
 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 9/142 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGA+SGIG  TA   A  G  + +  R   A + +   +       K  A  +DLS
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLS 65

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLTNLL 150
           +  ++    +E   Q    ++LINNAG+  T  +L     + Q     N    F   + +
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAV 125

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           L  M    R  GG G IINVSS
Sbjct: 126 LPGM----RARGG-GLIINVSS 142

Length = 241

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 63.3 bits (155), Expect = 9e-12
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 19/150 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTGA  GIG  TA+ LA  G  VV+   D  A +     +       +   +  
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG---GPDRALGVAC 477

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE-------LQFATNHLG 142
           D++  A+V+    E  +    ++I+++NAGI      +S    E         F  N  G
Sbjct: 478 DVTDEAAVQAAFEEAALAFGGVDIVVSNAGI-----AISGPIEETSDEDWRRSFDVNATG 532

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           HF    L+     +  +  G  G I+ ++S
Sbjct: 533 HF----LVAREAVRIMKAQGLGGSIVFIAS 558

Length = 681

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 62.0 bits (151), Expect = 1e-11
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 17/157 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-----DIAAGKDVKETI---VKEIPS 81
           SG  A VTGA+ GIG   A  LA  G  VV+  +     D  + K +  TI    +EI +
Sbjct: 2   SGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61

Query: 82  AKVDAM--ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN 139
           A   A+   +D+     VR        Q  +L+IL+NNAG +    +             
Sbjct: 62  AGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQR 121

Query: 140 HL--GHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG 174
               G +LL+   L  M K      G+G I+N+S   
Sbjct: 122 VNLRGTYLLSQAALPHMVKA-----GQGHILNISPPL 153

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 23/152 (15%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D SG + +VTGA+SGIG   A  LA RG  VV   R+ AA   +             + +
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPL 58

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFL 145
            LD+   A++R   +         + L+N AGI  + +   ++ +  +   A N  G  L
Sbjct: 59  RLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAAL 114

Query: 146 LTNLLLDTMKKTARK---SGGEGRIINVSSEG 174
                    +  AR    +G  G I+NVSS+ 
Sbjct: 115 -------VARHVARAMIAAGRGGSIVNVSSQA 139

Length = 245

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 22/146 (15%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G   +VTGA  GIG      L  RG   V    RD  +  D+           +V  ++L
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDL---------GPRVVPLQL 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSK--DNIELQFATNHLGHFLL 146
           D++  ASV   A         + IL+NNAGI      +L    D +  +  TN+ G   +
Sbjct: 57  DVTDPASVAAAAE----AASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
                  +      +GG G I+NV S
Sbjct: 113 ARAFAPVLA----ANGG-GAIVNVLS 133

Length = 238

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 61.4 bits (149), Expect = 2e-11
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 13/147 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELD 90
            A+VTGATSGIG   AR L   G+ V +  R     + +  T VKE+     + D    D
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARG---EEGLATT-VKELREAGVEADGRTCD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF---ATNHLGHFLLT 147
           + S+  +    +    ++  +++L+NNAG  G        + EL      TN  G F +T
Sbjct: 61  VRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELAD-ELWLDVVETNLTGVFRVT 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEG 174
             +L   K       G GRIIN++S G
Sbjct: 120 KEVL---KAGGMLERGTGRIINIASTG 143

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 60.6 bits (147), Expect = 3e-11
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           +D +G  A+VTGA  GIG  T + LA  G  VV   R  A   D+ +++V+E P   ++ 
Sbjct: 3   LDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQA---DL-DSLVRECPG--IEP 56

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHF 144
           + +DLS   +      E       +++L+NNA + +  PF+ ++K+  +  F  N     
Sbjct: 57  VCVDLSDWDATE----EALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVI 112

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSE 173
            ++ ++   M   AR   G   I+NVSS+
Sbjct: 113 HVSQIVARGMI--ARGVPGS--IVNVSSQ 137

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 3e-11
 Identities = 37/146 (25%), Positives = 57/146 (39%), Gaps = 11/146 (7%)

Query: 29  GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
             G  A++TG + GIG   A  L   G  V +  RD    ++    +  +     V  + 
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLA 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLL 146
            D+   A V+            L++LI NAG+        L+ +   L   TN  G F  
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
               +  +K+      G G IIN+SS
Sbjct: 121 IKAAVPALKR------GGGYIINISS 140

Length = 237

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 12/145 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AIVTG   G+G   AR+L   G  VV+       G+        E+         L
Sbjct: 4   KGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQ----AAAAEL-GDAARFFHL 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHFLLT 147
           D++                 +L++L+NNAGI+    + +    E +     N  G FL T
Sbjct: 59  DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGT 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             ++  MK+      G G IIN+SS
Sbjct: 119 RAVIPPMKEA-----GGGSIINMSS 138

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 60.3 bits (147), Expect = 4e-11
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 11/143 (7%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGAT GIG   A  LA RG +V++  R       V + I ++    +   +  D S+
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKY-GVETKTIAADFSA 62

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI---MGTPFM-LSKDNIELQFATNHLGHFLLTNL 149
              +     E  ++   + IL+NN GI   +   F+   +D ++     N +    +T L
Sbjct: 63  GDDIYE-RIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRL 121

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
           +L  M K  RK G    I+N+SS
Sbjct: 122 ILPGMVK--RKKGA---IVNISS 139

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 60.2 bits (146), Expect = 5e-11
 Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 10/147 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
            AIVTGA+ GIG   A  LA RG  + +     D  A + V E         +    + D
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEV---LAAGRRAIYFQAD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTP----FMLSKDNIELQFATNHLGHFLL 146
           +  L+       +      +L+ L+NNAGI   P      L++D+ +   A N  G F L
Sbjct: 60  IGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFL 119

Query: 147 TNLLLDTM-KKTARKSGGEGRIINVSS 172
           T  +   M ++  R  G    II V+S
Sbjct: 120 TQAVARRMVEQPDRFDGPHRSIIFVTS 146

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 59.8 bits (145), Expect = 5e-11
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 20/157 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           S   AIVTGA+ GIG   AR LA  G  V +     A      + +V EI +A  +  A+
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAVNY---AGSAAAADELVAEIEAAGGRAIAV 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FATNHLG 142
           + D++  A+V            ++++L+NNAG+M    + +  + +L+      ATN  G
Sbjct: 61  QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM---PLGTIADFDLEDFDRTIATNLRG 117

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
            F+        +++ AR  G  GRIIN+S+    L  
Sbjct: 118 AFV-------VLREAARHLGQGGRIINLSTSVIALPL 147

Length = 245

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 60.2 bits (146), Expect = 5e-11
 Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 27/160 (16%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAME 88
              A++TG T  +G   AR LA  G  V    R+   G  V     KEI +   +  A+ 
Sbjct: 5   NKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKV----AKEITALGGRAIALA 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG----------------IMGTPFMLSKDNI 132
            D+   AS+     E   Q   ++ILIN AG                     F L ++  
Sbjct: 61  ADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           E  F  N  G FL + +    M +        G IIN+SS
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLE-----QKGGSIINISS 155

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 5e-11
 Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 20/159 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A+VTG  SGIG   A + A +G  V +  R      +V   ++          +  
Sbjct: 14  SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS-EDVAEVAAQLL----GGNAKGLVC 68

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+S   SV    +       +++IL+N+AG+  +     +S+++ +     N  G FL+ 
Sbjct: 69  DVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMA 128

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS-------EGHRLAY 179
             +   M        G G+I+N++S       E H +AY
Sbjct: 129 QAVGRHMIAA-----GGGKIVNLASQAGVVALERH-VAY 161

Length = 255

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 6e-11
 Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 14/150 (9%)

Query: 33  TAIVTGATSGIGTE-TARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           T  +TGA+SG G   T R+LA RG  V   VR   A  D+K          ++  ++LD+
Sbjct: 4   TWFITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDV 57

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           +  A+VR           +++++++NAG  + G    LS   I  Q  TN +G   +   
Sbjct: 58  TDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRA 117

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
            L  +    R+ GG GRI+ VSSEG ++AY
Sbjct: 118 ALPHL----RRQGG-GRIVQVSSEGGQIAY 142

Length = 276

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 7e-11
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKV-DAMELD 90
             VTGA SGIG  TA  LA +G  + +  RD A G       V +  +    V +   LD
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRD-ADG---LAQTVADARALGGTVPEHRALD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLG--HFLL 146
           +S   +V  FA++ +  H  +++++N AGI   GT   L+ +        N +G  H   
Sbjct: 59  ISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIH--- 115

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
              +++T       +G  G ++NVSS
Sbjct: 116 ---VIETFVPPMVAAGRGGHLVNVSS 138

Length = 272

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG   +VTGA SGIG ETA   A  G  VV    D AA +   E I      A   A  +
Sbjct: 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI--RAAGAVAHAYRV 371

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM 126
           D+S   ++  FA     +H   +I++NNAGI M   F+
Sbjct: 372 DVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFL 409

Length = 582

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 25/151 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELD 90
            AIVT + SGIG   A +LA +G  +  G+   +  +  KET  +E+ S   + +  +LD
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDI--GITWHSDEEGAKET-AEEVRSHGVRAEIRQLD 60

Query: 91  LSSL----ASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHF 144
           LS L     ++            ++++L+NNAG M   PF+ +  D     F  +  G F
Sbjct: 61  LSDLPEGAQALDKLIQRLG----RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAF 116

Query: 145 LLTNLLLDTMKKTAR---KSGGEGRIINVSS 172
           L         +  AR   K G  GRIIN++S
Sbjct: 117 LC-------SQIAARHMVKQGQGGRIINITS 140

Length = 256

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 12/147 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTGA  GIG   A  LA  G  VV+   +    + V + IV +  +A   A+++D+S
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI--AVQVDVS 65

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSK---DNIELQFATNHLGHFLLT 147
              S +  A         ++ L+NNA I G     +L     D  +   + N  G  + T
Sbjct: 66  DPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCT 125

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEG 174
             +   M     K GG G I+N SS  
Sbjct: 126 RAVYKHM----AKRGG-GAIVNQSSTA 147

Length = 250

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 9/145 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA+ GIG   A  LA  G ++V+  R+    ++ ++ I KE    +  A   
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE--GVEATAFTC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLT 147
           D+S   +++           +++IL+NNAGI+         +         N  G F ++
Sbjct: 62  DVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVS 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             +   M K      G G+IIN+ S
Sbjct: 122 QAVARHMIKQ-----GHGKIINICS 141

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 22/181 (12%)

Query: 33  TAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
             ++TG +SGIG   A  LA    +   V   +RD+     + E     +    ++ ++L
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEA-AGALAGGTLETLQL 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+    SV        +    +++L+ NAG+  +G    LS+D +   F  N  G   + 
Sbjct: 61  DVCDSKSVAAAVE--RVTERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS-----GSFQSSALLL 202
              L  MK+  R S   GRI+  SS G      +G+ F+ +   S     G  +S A+ L
Sbjct: 119 QAFLPDMKR--RGS---GRILVTSSVGGL----QGLPFNDVYCASKFALEGLCESLAVQL 169

Query: 203 L 203
           L
Sbjct: 170 L 170

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 4e-10
 Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 11/144 (7%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G    +TG   G+G  TA  LA RG  V +    I  G       +  +P+  +    +D
Sbjct: 7   GKVVAITGGFGGLGRATAAWLAARGARVAL----IGRGAAPLSQTLPGVPADALRIGGID 62

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN 148
           L    + R    E N Q  +L+ L+N AG    GT      D  +  +  N       + 
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASK 122

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
             L  +  +     G GRI+N+ +
Sbjct: 123 AALPALTAS-----GGGRIVNIGA 141

Length = 239

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 57.3 bits (139), Expect = 4e-10
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 15/144 (10%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDL 91
            ++TGA+SGIG   AR  A  G +V +  R      D  + +  E+  P+  V+   LD+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARR----TDRLDELKAELLNPNPSVEVEILDV 56

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPF--MLSKDNIELQFATNHLGHFLLTN 148
           +     +   +E   +   L+++I NAG+  GT    +  K   E    TN LG   +  
Sbjct: 57  TDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRET-IDTNLLGAAAILE 115

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
             L   +  A+  G    ++ +SS
Sbjct: 116 AALPQFR--AKGRGH---LVLISS 134

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 4e-10
 Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 12/150 (8%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DL 91
            I+TGA+ GIG  TA + A RG  V +        +D  E +V+ I     +A+ +  D+
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYL---RNRDAAEAVVQAIRRQGGEALAVAADV 61

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK-DNIELQ--FATNHLGHFLLTN 148
           +  A V       + +  +L+ L+NNAGI+     L + D   L   FATN +G FL   
Sbjct: 62  ADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAR 121

Query: 149 LLLDTMKKTARKSGGE-GRIINVSSEGHRL 177
              + +K+ + + GG  G I+NVSS   RL
Sbjct: 122 ---EAVKRMSTRHGGRGGAIVNVSSMAARL 148

Length = 248

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 18/144 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           + ++TG +SGIG   AR L   G  V    R        KE  V  + +  ++A +LD +
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCR--------KEEDVAALEAEGLEAFQLDYA 57

Query: 93  SLASVRNFASE-YNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTN 148
              S+    ++   +   +L+ L NN G  G P     L  + +  QF  N  G   LT 
Sbjct: 58  EPESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTR 116

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            ++  M+K      G+GRI+  SS
Sbjct: 117 RVIPVMRKQ-----GQGRIVQCSS 135

Length = 277

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 57.1 bits (138), Expect = 6e-10
 Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 16/141 (11%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            IVTGA  GIG   AR L   G  V           D+   ++ E     +    LD++ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATV--------IALDLPFVLLLEYG-DPLRLTPLDVAD 51

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
            A+VR   S    +H  ++ L+N AG+   G    LS ++ E  FA N  G F L   + 
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 152 DTMKKTARKSGGEGRIINVSS 172
             MK   R++G    I+ V+S
Sbjct: 112 PHMK--DRRTGA---IVTVAS 127

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 57.2 bits (138), Expect = 6e-10
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 12/142 (8%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           IVTG + GIG    R     G  VV   R  AAG+ ++  + +  P +    +  D++  
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCK-FVPCDVTKE 71

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT----NHLGHFLLTNLL 150
             ++   S    +  +++ L+NNAG    P   + +    +F      N + +FL +   
Sbjct: 72  EDIKTLISVTVERFGRIDCLVNNAG-WHPPHQTTDETSAQEFRDLLNLNLISYFLASKYA 130

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           L  ++K+      +G IIN+SS
Sbjct: 131 LPHLRKS------QGNIINLSS 146

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 57.2 bits (139), Expect = 7e-10
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--D 90
             ++TGA++G+G  TAR  A RG  VV+    +A G++  E +  EI +A  +A+ +  D
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVL----LARGEEGLEALAAEIRAAGGEALAVVAD 65

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTN 148
           ++   +V+  A     +   ++  +NNA + +  PF  ++ +         +LG    T 
Sbjct: 66  VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
             L  M+   R     G II V S    LAY
Sbjct: 126 AALRHMRPRDR-----GAIIQVGSA---LAY 148

Length = 334

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 56.6 bits (137), Expect = 8e-10
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 18/144 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           T +VTGA  GIG      L   G   V   VRD  +       +V +    KV  + LD+
Sbjct: 5   TVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAH----LVAKYGD-KVVPLRLDV 59

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE---LQFATNHLGHFLLTN 148
           +   S++  A+    Q   ++++INNAG++    +L +  +E    +   N  G   L  
Sbjct: 60  TDPESIKAAAA----QAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQ 115

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
                +K       G G I+N++S
Sbjct: 116 AFAPVLKAN-----GGGAIVNLNS 134

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 8e-10
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 10/147 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  AIVTGA SGIG  TA++ A  G  VV+  RD  A + V   I       +  A + 
Sbjct: 4   AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA---GGRAFARQG 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+ S  +V         +  +L++L+NNAG    GT     + + +     N  G FL  
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEG 174
              +  M    ++ GG G I+N +S+ 
Sbjct: 121 KYAIPIM----QRQGG-GSIVNTASQL 142

Length = 252

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.7 bits (137), Expect = 9e-10
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI--VKEIPSAKVDAMELD 90
             +VTG+  GIG   A  LA  G  VV+  +  A  +++ ET+  VKE     +  +  D
Sbjct: 8   VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRA--EEMNETLKMVKENGGEGIGVLA-D 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDN-IELQFATNHLGHFLLTN 148
           +S+       A     ++   +IL+NNAG+ + +PF+   D  I+   +T+       + 
Sbjct: 65  VSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQ 124

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            L   M++     GG   I+N++S
Sbjct: 125 ELAKEMRE-----GGA--IVNIAS 141

Length = 252

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 20/146 (13%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   ++TGA+ GIG   A   A  G H+ +  RD  A + +   +        V    LD
Sbjct: 7   GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAVHALD 65

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKDNIELQ-----FATNHLGHF 144
           LSS  +    A+E       ++IL+NNAG I G       D+++       +     G+ 
Sbjct: 66  LSSPEAREQLAAEAG----DIDILVNNAGAIPGGGL----DDVDDAAWRAGWELKVFGYI 117

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINV 170
            LT L    MK  AR   G G I+NV
Sbjct: 118 DLTRLAYPRMK--AR---GSGVIVNV 138

Length = 259

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VTG  SGIG   A+ LA  G  VV+   D    + V E         +   ++ D
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAE---AAQGGPRALGVQCD 57

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTN 148
           ++S A V++   +  ++   L+I+++NAGI  + P    S ++       N  GHFL++ 
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSR 117

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
                MK      G  G I+  +S
Sbjct: 118 EAFRIMK----SQGIGGNIVFNAS 137

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 55.6 bits (134), Expect = 2e-09
 Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 12/151 (7%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA+ GIG  TAR+L   G  V +  RD      +     +E+    V  +  D+  
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARD---EARLAAAAAQELE--GVLGLAGDVRD 57

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
            A VR            L+ L+NNAG+  M     L+ +   L   TN  G F   +   
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
             + +      G G I+NV S   + A+  G
Sbjct: 118 PALLRR-----GGGTIVNVGSLAGKNAFKGG 143

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 55.1 bits (133), Expect = 2e-09
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TGA+SGIG  TA   A RG  VV+  R   A  ++   +       +  A+  D++  
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAVVADVADA 61

Query: 95  ASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
           A V   A     +  +++  +NNAG  + G    ++ +     F  N+LGH   T   L 
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121

Query: 153 TMKKTARKSGGEGRIINVSSEG 174
            +++      G G +INV S  
Sbjct: 122 HLRR-----RGGGALINVGSLL 138

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 55.3 bits (133), Expect = 2e-09
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 22/155 (14%)

Query: 34  AIVTGATSGIGTETARVLALR----GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            +VTGA+ G G   A+ LA      G  +V+  R+  A + +K  I  E    +V  + L
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 90  DLSSLASVRNF--ASEYNIQHHQLN--ILINNAGIMGTPFMLSK--------DNIELQFA 137
           DL + A +     A     +   L   +LINNAG +G    +SK          ++  +A
Sbjct: 63  DLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGD---VSKGFVDLSDSTQVQNYWA 119

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N      LT+ +   +K      G    ++N+SS
Sbjct: 120 LNLTSMLCLTSSV---LKAFKDSPGLNRTVVNISS 151

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 11/147 (7%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAME 88
           G   ++TG +SGIG   A+ L   G +V++  R  +  ++  E I  E      KV  + 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP--FM-LSKDNIELQFATNHLGHFL 145
            DLS    V    ++   +    ++++N AG +  P  F  L+ +  E     N+ G   
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAG-ISIPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           + + +L  MK+        G I+ VSS
Sbjct: 120 VAHAVLPLMKEQ-----RPGHIVFVSS 141

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 16/148 (10%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
           G TA+VTG T GIG      LA  G  V    R+    K++ E  + E      KV+   
Sbjct: 6   GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARN---QKELDE-CLTEWREKGFKVEGSV 61

Query: 89  LDLSSLASVRNFASEYNIQHH--QLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHF 144
            D+SS  S R    +    H   +LNIL+NNAG  I       ++++  L  +TN    +
Sbjct: 62  CDVSS-RSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAY 120

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
            L+ L    +K +       G I+ +SS
Sbjct: 121 HLSRLAHPLLKASGN-----GNIVFISS 143

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELD 90
            AI+TGA  GIG   A  LA  G ++V  + D+   +  K TI +EI  A  +A+    D
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIV--LADLNLEEAAKSTI-QEISEAGYNAVAVGAD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTN 148
           ++    V     +   +    ++++NNAGI   TP + +++++++  +A N  G      
Sbjct: 61  VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 149 LLLDTMKKTARKSGGEGRIINVSS-EGHR 176
                 KK     G  G+IIN SS  G +
Sbjct: 121 AAARQFKKL----GHGGKIINASSIAGVQ 145

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 8/151 (5%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
            D     G  AIVTG + GIG   AR LA  G  V +        ++  E + K+    K
Sbjct: 1   LDLFSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGV-K 59

Query: 84  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHL 141
             A + D+SS  SV     +      +++ILI NAGI +  P +  + +        N  
Sbjct: 60  TKAYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLN 119

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           G F          KK      G+G +I  +S
Sbjct: 120 GVFNCAQAAAKIFKKQ-----GKGSLIITAS 145

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 40/160 (25%), Positives = 57/160 (35%), Gaps = 24/160 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TG    +G   A+ LA  G  V +  R+    + V   I      A   A++ 
Sbjct: 9   KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEAL--AVKA 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG-----------------IMGTPFMLSKDNI 132
           D+    S+     +        +ILIN AG                    T F L ++  
Sbjct: 67  DVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF 126

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           E  F  N LG  L T +    M          G IIN+SS
Sbjct: 127 EFVFDLNLLGTLLPTQVFAKDMVG-----RKGGNIINISS 161

Length = 278

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 54.6 bits (131), Expect = 4e-09
 Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 12/147 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAM 87
           +G  AIVTG   GIG      LA  G  VV+   +  + K+  E +V E+      V A+
Sbjct: 5   NGKVAIVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAV 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFL 145
           + D+S +        E      +++IL+NNAGI    T   L++++ E     N    F 
Sbjct: 62  QADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFN 121

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
            T+ +L  + +       EGRII++SS
Sbjct: 122 TTSAVLPYITEAE-----EGRIISISS 143

Length = 247

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A++TG  SGIG  TAR LA  G  VV+G  D  AGK   +    E+    V     
Sbjct: 6   AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD----EVGGLFVPT--- 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI 120
           D++   +V          +  ++I  NNAGI
Sbjct: 59  DVTDEDAVNALFDTAAETYGSVDIAFNNAGI 89

Length = 255

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 5e-09
 Identities = 29/93 (31%), Positives = 46/93 (49%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           I   G  A+VTG +SGIG  T  +L   G  V +  RD       +  + ++ P A++ A
Sbjct: 4   IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLA 63

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAG 119
              D+   A V  FA+    +   +++L+NNAG
Sbjct: 64  ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 9/142 (6%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTG T G+G   AR  A RG   ++   R+   G+     +  E   AK   ++ DLS
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL--EALGAKAVFVQADLS 66

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
            +   R   +  +    +L+ L+N AG+   GT    S +  +  FA N    F L    
Sbjct: 67  DVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEA 126

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           +  M    R+   EG I+N+ S
Sbjct: 127 IKLM----RRRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 54.1 bits (130), Expect = 5e-09
 Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 12/145 (8%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
           G  AI+TGA +GIG E A   A  G  VV  V DI A  D    +V EI     +  A  
Sbjct: 11  GKCAIITGAGAGIGKEIAITFATAGASVV--VSDINA--DAANHVVDEIQQLGGQAFACR 66

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLT 147
            D++S   +   A     +  +++IL+NNAG  G  PF +   +    +  N    F L+
Sbjct: 67  CDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLS 126

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            L+   M+K      G G I+ ++S
Sbjct: 127 QLVAPEMEK-----NGGGVILTITS 146

Length = 255

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 15/151 (9%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           GL A+VTG  SG+G  T   L  +G  VV+     + G    ET+ K         + +D
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG----ETVAKLGD--NCRFVPVD 55

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI------ELQFA--TNHLG 142
           ++S   V+   +    +  +L+I++N AGI       +K           Q     N +G
Sbjct: 56  VTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIG 115

Query: 143 HFLLTNLLLDTMKKTARKSGGE-GRIINVSS 172
            F +  L    M K     GGE G IIN +S
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGVIINTAS 146

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 26/156 (16%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D SG TA+VTG + G+G + A  L   G  VV+  R     ++        + +  +DA+
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA----HLEALGIDAL 64

Query: 88  EL--DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDN--------IELQF 136
            +  D++  A +   A E   +   ++IL+NNAG   G P   ++D+        + L  
Sbjct: 65  WIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAP---AEDHPVEAWDKVMNL-- 119

Query: 137 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             N  G FLL+      + K +    G GRIINV+S
Sbjct: 120 --NVRGLFLLSQ----AVAKRSMIPRGYGRIINVAS 149

Length = 259

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 54.0 bits (130), Expect = 6e-09
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 10/144 (6%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTG  +G+G   A  LA  G  +++         + +  I KE    KV  +++D
Sbjct: 15  GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVD 71

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAG-IMGTPFMLSKD-NIELQFATNHLGHFLLTN 148
           L+   S      E   +  +++IL+NNAG I   P +  KD +       N    + L+ 
Sbjct: 72  LTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQ 131

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            +   M K      G G+IIN++S
Sbjct: 132 AVAKVMAKQ-----GSGKIINIAS 150

Length = 258

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 54.1 bits (130), Expect = 7e-09
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 15/153 (9%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TG  SG+G  TA  LA  G  + +   +    +  K  +++  P A+V  ++ D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFM---LSKDNIELQFATNHLGHFLLTNLLL 151
           A V  +      Q  +++   NNAGI G   +      D  +   + N  G F     +L
Sbjct: 67  AQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVL 126

Query: 152 DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR 184
             M++      G G I+N +S G       GIR
Sbjct: 127 KVMREQ-----GSGMIVNTASVG-------GIR 147

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 8e-09
 Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 32/164 (19%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVD 85
           D  G TA+VTG++ GIG +TA++LA  G HVV+  R  A        +V EI +A  +  
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR---ANKVVAEIEAAGGRAS 59

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNA-GIM----------------------- 121
           A+  DL+   SV         +   L+ L+ NA G M                       
Sbjct: 60  AVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARA 119

Query: 122 GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGE 164
             P M +   +   F T+H  HF+ T   +   +  AR K  GE
Sbjct: 120 ALPLMPAGSRV--VFVTSHQAHFIPTVKTMPEYEPVARSKRAGE 161

Length = 248

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 53.8 bits (130), Expect = 9e-09
 Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 18/149 (12%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM----GVRDIAAGKDVKETIVKEIPSAKVDA 86
           G  A++TG  SGIG   A   A  G  V +       D A  ++ K+ I  E    K   
Sbjct: 26  GKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDA--EETKKLI--EEEGRKCLL 81

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGH 143
           +  DL   +  R+   E   +  +L+IL+NNA        +   + + +E  F TN    
Sbjct: 82  IPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSM 141

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           F LT   L  +KK +        IIN +S
Sbjct: 142 FYLTKAALPHLKKGS-------SIINTTS 163

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 53.9 bits (130), Expect = 9e-09
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 15/153 (9%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVD 85
           D +G  A++TGA SG G   AR+ A  G+ +V+   D+    D  +  V E+ +  A+V 
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLA--DVQQ--DALDRAVAELRAQGAEVL 58

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGH 143
            +  D+S  A V   A     +   +++L NNAG+     +      + +     N  G 
Sbjct: 59  GVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGV 118

Query: 144 F----LLTNLLLDTMKKTARKSGGEGRIINVSS 172
                  T L+L   +K       EG I+N +S
Sbjct: 119 IHGVRAFTPLMLAAAEKDP---AYEGHIVNTAS 148

Length = 287

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 14/146 (9%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAME 88
           G TA++TGA  GIG   ARV A  G ++++    +    ++++    E+     +  A+ 
Sbjct: 6   GKTALITGALQGIGEGIARVFARHGANLIL----LDISPEIEKL-ADELCGRGHRCTAVV 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
            D+   ASV         +  +++IL+NNAG+     F+ +S ++ +     N  G + +
Sbjct: 61  ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNV 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T  +L  M         +GRI+ +SS
Sbjct: 121 TKAVLPEMIAR-----KDGRIVMMSS 141

Length = 263

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTG   GIGT   + LA  G  V      +    +   +   +         +E D+S
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE--QGALGFDFRVVEGDVS 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           S  S +   ++   +   +++L+NNAGI    T   ++ +       TN    F +T  +
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPV 120

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           +D M++      G GRIIN+SS
Sbjct: 121 IDGMRER-----GWGRIINISS 137

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
             ++TGA+ GIG  TA + A RG  V +   RD AA ++  + +       +   +  D+
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAGDV 61

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLLT 147
           ++ A V            +L+ L+NNAGI+  P M    +    +   F TN LG +L  
Sbjct: 62  ANEADVIAMFDAVQSAFGRLDALVNNAGIVA-PSMPLADMDAARLRRMFDTNVLGAYLCA 120

Query: 148 NLLLDTMKKTARKSGGE-GRIINVSSEGHRL 177
               +  ++ +   GG  G I+NVSS   RL
Sbjct: 121 R---EAARRLSTDRGGRGGAIVNVSSIASRL 148

Length = 248

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 52.9 bits (127), Expect = 1e-08
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 20/145 (13%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK-VDAMEL 89
           G  A++T A  GIG   A   A  G +V+          D+ E  +KE+     +    L
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVI--------ATDINEEKLKELERGPGITTRVL 53

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++    V   A E      ++++L N AG +  G+      D+ +     N    +L+ 
Sbjct: 54  DVTDKEQVAALAKEEG----RIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMI 109

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             +L  M   ARK    G IIN+SS
Sbjct: 110 KAVLPKM--LARKD---GSIINMSS 129

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 52.9 bits (127), Expect = 1e-08
 Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 19/148 (12%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD-AMEL 89
           G  AIVTGA +GIG   A  LA  G  VV+   D  A + V   I     + +VD   E 
Sbjct: 3   GKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTDEQ 62

Query: 90  DLSSL--ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QFATNHLGHF 144
            +++L   +V  F          L++L+NNAG M     +   ++ +     A N  G F
Sbjct: 63  QVAALFERAVEEFGG--------LDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTF 114

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L        M       GG G I+N+SS
Sbjct: 115 LCCRHAAPRM----IARGG-GSIVNLSS 137

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--D 90
             I+TGA+ GIG   A  LA  G  +V+  R+         ++ +E+     +A+ +  D
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETR----LASLAQELADHGGEALVVPTD 58

Query: 91  LSSLASVRNFASEYNIQHH-QLNILINNAGI-MGTPFMLSKDNIELQ--FATNHLGHFLL 146
           +S   +      E  +     ++IL+NNAGI M + F    D    +     N+LG    
Sbjct: 59  VSDAEACER-LIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYC 117

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T+  L  +K +       G+I+ VSS
Sbjct: 118 THAALPHLKAS------RGQIVVVSS 137

Length = 263

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 16/142 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             ++TG +SGIG   A      G  V    R        K   V+ + +A   A++LD++
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATAR--------KAEDVEALAAAGFTAVQLDVN 54

Query: 93  SLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
             A++   A E   +H  L++LINNAG   MG       + +  QF TN      +T  L
Sbjct: 55  DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRAL 114

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
              +++        G ++N+ S
Sbjct: 115 FPLLRR------SRGLVVNIGS 130

Length = 274

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 14/142 (9%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           +TGA+ G G         RG  VV   RD A   D+ E         ++  + LD++  A
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRA 62

Query: 96  SVRNFASEYNIQHH-QLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLD 152
           +V   A E  ++H  +L+I++NNAG      +  +++     Q  TN  G   +T  +L 
Sbjct: 63  AVFA-AVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLP 121

Query: 153 TMKKTARKSGGEGRIINVSSEG 174
            +    R+    G II +SS G
Sbjct: 122 YL----REQRS-GHIIQISSIG 138

Length = 275

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G T ++TGA   IG+   + +   G  V+    D  A  ++ E++ KE  S K+  +EL
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVEL 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL-QFATN---HLGHFL 145
           D++   S+  F S+   ++ +++  +N A      +     ++ L  F  N   HLG   
Sbjct: 63  DITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSF 122

Query: 146 LTNLLLDTMKKTAR--KSGGEGRIINVSS 172
           L        ++ A+  K  G G ++N+SS
Sbjct: 123 L------FSQQFAKYFKKQGGGNLVNISS 145

Length = 256

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 14/148 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA--M 87
           SG  A+VTG  +GIG  TA   A  G  VV+  RD A G    E  V  I  A  +A  +
Sbjct: 6   SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG----EETVALIREAGGEALFV 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHF 144
             D++  A V+    +    + +L+   NNAGI      L   S+   +     N  G +
Sbjct: 62  ACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVW 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L     +  M        G G I+N +S
Sbjct: 122 LCMKYQIPLMLAQ-----GGGAIVNTAS 144

Length = 253

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMEL 89
           G  A+VTGA  GIG   A VLA  G HVV    D+ AAG+ +       +      A+ L
Sbjct: 210 GKVALVTGAARGIGAAIAEVLARDGAHVV--CLDVPAAGEALAAV-ANRV---GGTALAL 263

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI 120
           D+++  +    A     +H  L+I+++NAGI
Sbjct: 264 DITAPDAPARIAEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 4e-08
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+V GA+SGIG  TA  LA  G  V +G R +   +++ + I  +   A   A  LD++
Sbjct: 12  PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAV--AFPLDVT 69

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
              SV++F ++      ++ +L++ AG    G    +S +  E Q   + +G   L   +
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAV 129

Query: 151 LDTMKKTARKSGGEGRIINVSSE 173
           L  M +  R     G +I V S+
Sbjct: 130 LPGMIERRR-----GDLIFVGSD 147

Length = 274

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 51.8 bits (124), Expect = 4e-08
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 13/144 (9%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTG   GIG +        G  VV    D   G D  E    E P+        D
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEA---EGPNLFFVHG--D 55

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN 148
           ++    V+        +  ++++L+NNA     G    L  +  +   + N  G + L+ 
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSR 115

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
              D + K       +GRIIN++S
Sbjct: 116 YCRDELIK------NKGRIINIAS 133

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 6/145 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG + GIG   A+     G  V++  R   A  D  E +       +  A+  
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSA---YGECIAIPA 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLT 147
           DLSS   +    +    +  +L++L+NNAG   G P     +   +     N    F LT
Sbjct: 62  DLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLT 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             LL  ++  A  +    R+IN+ S
Sbjct: 122 QALLPLLRAAA-TAENPARVINIGS 145

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 19/153 (12%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           AIVTG + G+G   A  L   G+ V+     +A  +      +      ++  +ELDLS 
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVL----GVARSRH---PSLAAAAGERLAEVELDLSD 56

Query: 94  LASVRNFASEYNIQH----HQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLL 146
            A+   + +   +          +LINNAG    +G    L    I      N     +L
Sbjct: 57  AAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLML 116

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
           T  L       A +     RI+++SS   R AY
Sbjct: 117 TAALAQAASDAAER-----RILHISSGAARNAY 144

Length = 243

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 47/155 (30%), Positives = 64/155 (41%), Gaps = 16/155 (10%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSA- 82
           G   IVTGA  GIG   A   A  G  VV  V DI       A+G    + +V EI +A 
Sbjct: 6   GRVVIVTGAGGGIGRAHALAFAAEGARVV--VNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 83  -KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN-H 140
            +  A   D++      N           L++L+NNAGI+    + +    E       H
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVH 123

Query: 141 L-GHFLLTNLLLDTMKKTARKSGG--EGRIINVSS 172
           L GHF          +  + K+G   + RIIN SS
Sbjct: 124 LKGHFATLRHAAAYWRAES-KAGRAVDARIINTSS 157

Length = 286

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.2 bits (123), Expect = 5e-08
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 31  GLTAIVTGAT--SGIGTETARVLALRGVHVVM-----GVRDIAAGKDVKETIV--KEI-- 79
              A+VTGA+  +GIG    R LA +G+ +         + +  G   KE ++  +EI  
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES 64

Query: 80  PSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFA 137
              + + ME+DLS   +        + +    +ILINNA          L+ + ++  +A
Sbjct: 65  YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYA 124

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N     LL++      K+   K+G  GRIIN++S
Sbjct: 125 VNVRATMLLSSAF---AKQYDGKAG--GRIINLTS 154

Length = 256

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.1 bits (123), Expect = 6e-08
 Identities = 47/149 (31%), Positives = 63/149 (42%), Gaps = 27/149 (18%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           +    T ++TGA SGIG   AR    +G  V         G D ++   K   S     +
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVY--------GVDKQD---KPDLSGNFHFL 50

Query: 88  ELDLSS-LASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDNIELQ--FATNHLGH 143
           +LDLS  L  + ++          ++IL N AGI+     +L     E Q  F TN    
Sbjct: 51  QLDLSDDLEPLFDWVP-------SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTST 103

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           FLLT   L  M    RKS   G IIN+ S
Sbjct: 104 FLLTRAYLPQML--ERKS---GIIINMCS 127

Length = 235

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 8/150 (5%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
              A+VTGA  G+G   A   A  G  V++  R  +   +V E I      A V A   D
Sbjct: 10  DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA--D 67

Query: 91  LSSLASVRNFASEYNIQHHQLNILINN-AGIMGTPFM-LSKDNIELQFATNHLGHFLLTN 148
           L+   +    A +      +L+I++NN  G M  P +  S  ++   F  N      LT 
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV 127

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLA 178
             +  M + +    G G +IN+SS   RLA
Sbjct: 128 AAVPLMLEHS----GGGSVINISSTMGRLA 153

Length = 263

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 8/143 (5%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 91
            ++TG + G+G   A  LA  G  V++       G+   + +   I +A  K   +  D+
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNL 149
              A+ R        +  +L+IL+NNAGI     F  LS +  +     N  G F +T  
Sbjct: 69  RDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQA 128

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
            L  M +        GRI+N++S
Sbjct: 129 ALPPMIRA----RRGGRIVNIAS 147

Length = 249

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 51.1 bits (123), Expect = 6e-08
 Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 18/152 (11%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           ++TG  SG G   A+ L   G  V+ G       G       ++ + S ++  ++LD++ 
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGA----KELRRVCSDRLRTLQLDVTK 59

Query: 94  LASVRNFASEYNIQHHQ---LNILINNAGIMGTP---FMLSKDNIELQFATNHLGHFLLT 147
              ++  A+++  +H     L  L+NNAGI+G      +L  D+       N  G   +T
Sbjct: 60  PEQIKR-AAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVT 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
              L  +++ A+     GR++NVSS G R+ +
Sbjct: 119 KAFLPLLRR-AK-----GRVVNVSSMGGRVPF 144

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 7e-08
 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
            D ++  G   IVTG +SGIG    + L   G +VV    DI  G    E          
Sbjct: 2   QDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNA--DIHGGDGQHE---------N 50

Query: 84  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-----------TPFMLSKDNI 132
              +  D+SS   V +  +E   +  +++ L+NNAGI               + L++   
Sbjct: 51  YQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAF 110

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE 173
           +  F  N  G FL++  +   M K       +G I+N+SSE
Sbjct: 111 DKMFNINQKGVFLMSQAVARQMVKQ-----HDGVIVNMSSE 146

Length = 266

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 51.8 bits (124), Expect = 7e-08
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 15/149 (10%)

Query: 29  GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
                 +VTGA  GIG    +  A  G  VV+  R++   ++  +++          A+ 
Sbjct: 3   AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALA 57

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM-----LSKDNIELQFATNHLGH 143
           +D+S  A +R    + + +  ++++L+NNAG+   P M      + +      A N  G 
Sbjct: 58  MDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTD-PTMTATLDTTLEEFARLQAINLTGA 116

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           +L+    L  M +    +     I+NV+S
Sbjct: 117 YLVAREALRLMIEQGHGAA----IVNVAS 141

Length = 520

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 50.9 bits (122), Expect = 8e-08
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 7/145 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA++TGA+ GIG   AR     G  V++  RD  A    ++ + +E P  +V  +  
Sbjct: 8   DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAA 67

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLT 147
           D+S     R            L+IL+NNAG       +  ++D     F TN    F L+
Sbjct: 68  DVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELS 127

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
                 +K+ A  +     I+N+ S
Sbjct: 128 RYAHPLLKQHASSA-----IVNIGS 147

Length = 257

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 8e-08
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 13/155 (8%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D +G  A+VTG++ GIG   A  LA  G  V++  RD A      E++  +       A+
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHAL 64

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
             D++   +VR     +  +   ++IL+NNAG      M  +  +E  F  +     L T
Sbjct: 65  AFDVTDHDAVRAAIDAFEAEIGPIDILVNNAG------MQFRTPLE-DFPADAFERLLRT 117

Query: 148 NL--LLDTMKKTARK--SGGEGRIINVSSEGHRLA 178
           N+  +    +  AR   + G G+IIN++S    LA
Sbjct: 118 NISSVFYVGQAVARHMIARGAGKIINIASVQSALA 152

Length = 255

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 50.7 bits (122), Expect = 8e-08
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 24/104 (23%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  AI+TGA+SGIG   A++ A  G  VV+G R     +   + +V EI +   +A+ L
Sbjct: 5   NGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR----RQAELDQLVAEIRAEGGEAVAL 60

Query: 90  -----------DLSSLASVRNFASEYNIQHHQLNILINNAGIMG 122
                       L +LA V  F          L+I  NNAG +G
Sbjct: 61  AGDVRDEAYAKALVALA-VERFGG--------LDIAFNNAGTLG 95

Length = 254

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 50.6 bits (121), Expect = 9e-08
 Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 16/145 (11%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 91
           AIVTG  +GIG   A  LA  G  VV  + D+ +  +  E +   I  A  +   +E ++
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVV--IADLKS--EGAEAVAAAIQQAGGQAIGLECNV 57

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT----NHLGHFLLT 147
           +S   +         Q   + IL+NNAG  G P        E  F      N    F L+
Sbjct: 58  TSEQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLS 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            L    M+K      G G I+N+SS
Sbjct: 117 QLCAPHMQKA-----GGGAILNISS 136

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           AIVTG + GIG      L   G +V+    +           +KE     VD  ++D+S+
Sbjct: 9   AIVTGGSQGIGKAVVNRLKEEGSNVI----NFD---------IKEPSYNDVDYFKVDVSN 55

Query: 94  LASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
              V         ++ +++IL+NNAGI   G    + +D  +     N  G FL++   +
Sbjct: 56  KEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTI 115

Query: 152 DTMKKTARKSGGEGRIINVSS 172
             M K       +G IIN++S
Sbjct: 116 PYMLKQ-----DKGVIINIAS 131

Length = 258

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMEL 89
           G  A+VTGA +G+G   A  LA  G  +V      A   +  ET  + E    +  ++  
Sbjct: 5   GKVALVTGANTGLGQGIAVGLAEAGADIVG-----AGRSEPSETQQQVEALGRRFLSLTA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           DLS + +++        +   ++IL+NNAGI+       +     +F+       +  NL
Sbjct: 60  DLSDIEAIKALVDSAVEEFGHIDILVNNAGII-------RRADAEEFSEKDWDDVMNVNL 112

Query: 150 -----LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR 184
                L     K   K G  G+IIN++S    L++  GIR
Sbjct: 113 KSVFFLTQAAAKHFLKQGRGGKIINIAS---MLSFQGGIR 149

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 49.9 bits (119), Expect = 2e-07
 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
            D SG  A+VTGA+ GIG E AR+L  +G   ++G+      K   E +  E+   +V  
Sbjct: 2   FDLSGRKALVTGASGGIGEEIARLLHAQG--AIVGLHGTRVEK--LEALAAEL-GERVKI 56

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHF 144
              +LS    V+    +       ++IL+NNAGI   G    +S ++ +     N    F
Sbjct: 57  FPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATF 116

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
            LT  L   M +  R+    GRIIN++S
Sbjct: 117 RLTRELTHPMMR--RRY---GRIINITS 139

Length = 245

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 49.5 bits (118), Expect = 2e-07
 Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G TA+VTGA SGIG E A  LA  G  V +   +      V + I K     K   + +D
Sbjct: 7   GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMD 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHF 144
           +++  +V     +   +   ++IL++NAGI          F   K       A +  G F
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQ----AIHVDGAF 120

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L T   L  M K  R     G +I + S
Sbjct: 121 LTTKAALKHMYKDDRG----GVVIYMGS 144

Length = 262

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 16/147 (10%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+V G    +G      LA  G  V +   +     +V + I  E           D +
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT 63

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTN 148
           S  SV   +   +    ++++L+ NAGI      T F L   +  LQ   N +G+FL   
Sbjct: 64  SEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQ--VNLVGYFL--- 118

Query: 149 LLLDTMKKTAR---KSGGEGRIINVSS 172
                 ++ +R   + G +GRII ++S
Sbjct: 119 ----CAREFSRLMIRDGIQGRIIQINS 141

Length = 259

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           +TGA SGIG  TA + A  G  V  G  DI         +  E+ +       LD++  A
Sbjct: 6   ITGAASGIGRATALLFAAEGWRV--GAYDINE--AGLAALAAELGAGNAWTGALDVTDRA 61

Query: 96  SVRN----FASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNL 149
           +       FA+       +L++L NNAGI  G PF  +  +  +     N  G     + 
Sbjct: 62  AWDAALADFAAA---TGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHA 118

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
            L  +K T        R+IN SS
Sbjct: 119 ALPYLKATP-----GARVINTSS 136

Length = 260

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 23/151 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAME 88
                ++TGA+ GIG   A  LA  G  +++  R+        E +   +P   +   + 
Sbjct: 4   KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK----LEALAARLPYPGRHRWVV 59

Query: 89  LDLSS---LASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHL 141
            DL+S     +V   A     +   +N+LINNAG+    F L      + IE   A N  
Sbjct: 60  ADLTSEAGREAVLARAR----EMGGINVLINNAGV--NHFALLEDQDPEAIERLLALNLT 113

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
               LT  LL  ++           ++NV S
Sbjct: 114 APMQLTRALLPLLRAQ-----PSAMVVNVGS 139

Length = 263

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTG  + IG   AR L   G  V +   D   G  V  ++       +   +  D
Sbjct: 6   GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNA 118
           ++  A++    +    +  +++IL+N A
Sbjct: 61  ITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 12/144 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TG +SG G   A+     G  VV  VR  AA  D +          +  A  LD++
Sbjct: 6   TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-----PDRALARLLDVT 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
              ++    ++       +++L+NNAG    G         +  QF  N  G   +T  +
Sbjct: 61  DFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120

Query: 151 LDTMKKTARKSGGEGRIINVSSEG 174
           L  M+  AR+    G I+N++S G
Sbjct: 121 LPGMR--ARRR---GHIVNITSMG 139

Length = 277

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI---PSAKVDA 86
            G  A +TG  +GIG   A+  A  G  V +  R      +V E   +EI      +   
Sbjct: 2   KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRK----PEVLEAAAEEISSATGGRAHP 57

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAG 119
           ++ D+    +V     E   +  +++ILINNA 
Sbjct: 58  IQCDVRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 22/157 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
            A+VTG   GIG   A  LA  G  V   V D+   +  KET  KEI  A  K  A +LD
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVA--VADLNE-ETAKETA-KEINQAGGKAVAYKLD 57

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTN 148
           +S    V +   +   +    ++++NNAG+   TP + ++++ ++  +  N  G      
Sbjct: 58  VSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLF--- 114

Query: 149 LLLDTMKKTAR---KSGGEGRIINVSSEGHRLAYHEG 182
                ++  AR   K G  G+IIN +S    +A HEG
Sbjct: 115 ----GIQAAARQFKKQGHGGKIINAAS----IAGHEG 143

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 21/147 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TA+VTGA  GIG   AR     G  V+    D AA           +  A+   +  DL+
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAF----ADALGDARFVPVACDLT 59

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFL 145
             AS+    +    +   +++L+ NAG          TP     DN     A N    +L
Sbjct: 60  DAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADN-----ALNLEAAYL 114

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
               +L+ M K +R     G ++N+ S
Sbjct: 115 CVEAVLEGMLKRSR-----GAVVNIGS 136

Length = 257

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 13/141 (9%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA--MELDLSS 93
           +TGA SG+G   A   A  G  + +   +   G    E  +K +  A  D      D+  
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGG----EETLKLLREAGGDGFYQRCDVRD 60

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLL 151
            + +   A     +   +++++NNAG+    F   LS ++ + Q A N +G        L
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 152 DTMKKTARKSGGEGRIINVSS 172
              K+        GRI+N++S
Sbjct: 121 PLFKRQ-----KSGRIVNIAS 136

Length = 270

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 48.1 bits (114), Expect = 6e-07
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 20/166 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM--GVRDIAAGKDVKETIVKEIPSAKVDAM 87
            G  A+VTGA+ GIG   A  LA  G  V +  G    AA + ++E    E    K   +
Sbjct: 5   DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI---ESNGGKAFLI 61

Query: 88  ELDLSSLASVRNFASEYN------IQHHQLNILINNAGI--MGTPFMLSKDNIELQFATN 139
           E DL+S+  V+    +        +   +++IL+NNAGI   GT    +++  +   A N
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVN 121

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF 185
               F L    L  ++        EGR+IN+SS   RL +   I +
Sbjct: 122 IKAPFFLIQQTLPLLR-------AEGRVINISSAEVRLGFTGSIAY 160

Length = 254

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.0 bits (115), Expect = 6e-07
 Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 8/146 (5%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTG   GIG   AR LA  G  + +    D       ++ +       +V     D+
Sbjct: 4   VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADV 61

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGI----MGTPFMLSKDNIELQFATNHLGHFLLT 147
           + L++             +++ L+NNAG+     G    L+ ++ +   A N  G F LT
Sbjct: 62  ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 148 NLLLDTM-KKTARKSGGEGRIINVSS 172
             +   M  +   +      I+ VSS
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSS 147

Length = 256

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 48.1 bits (115), Expect = 8e-07
 Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 23/154 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSAK 83
           G   +VTGA  G+G   A   A RG  VV  V D+              + +V EI +A 
Sbjct: 5   GRVVLVTGAGGGLGRAYALAFAERGAKVV--VNDLGGDRKGSGKSSSAADKVVDEIKAAG 62

Query: 84  VDAMELDLSSLASVRNFAS--EYNIQHHQ-LNILINNAGIM--GTPFMLSKDNIELQFAT 138
             A    +++  SV +     +  I     ++IL+NNAGI+   +   +S+++ +L    
Sbjct: 63  GKA----VANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRV 118

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           +  G F +T      M+K        GRIIN SS
Sbjct: 119 HLKGSFKVTRAAWPYMRKQ-----KFGRIINTSS 147

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 23/171 (13%)

Query: 6   FNRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI 65
           +   GP+     STA+  +   + S     +TG   GIG   A   A  G  +++  RD 
Sbjct: 250 YGGSGPA-----STAQAPSPLAE-SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA 303

Query: 66  AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPF 125
              K + E +  E  S +      D++  A+V +  ++   +  +L++L+NNAG +   F
Sbjct: 304 EGAKKLAEALGDEHLSVQA-----DITDEAAVESAFAQIQARWGRLDVLVNNAG-IAEVF 357

Query: 126 MLSKD----NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             S +    +    +  N  G F          +  AR     G I+N+ S
Sbjct: 358 KPSLEQSAEDFTRVYDVNLSGAFA-------CARAAARLMSQGGVIVNLGS 401

Length = 520

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 17/151 (11%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G TA++TG+  GIG   A+     G  V +   ++ A +        EI  A   A+ LD
Sbjct: 3   GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAAR----ATAAEIGPAAC-AISLD 57

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           ++  AS+    +    +   ++IL+NNA +  +     +++++ +  FA N  G   +  
Sbjct: 58  VTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFM-- 115

Query: 149 LLLDTMKKTARK---SGGEGRIINVSSEGHR 176
                M+  AR     G  G+IIN++S+  R
Sbjct: 116 -----MQAVARAMIAQGRGGKIINMASQAGR 141

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 47.3 bits (112), Expect = 1e-06
 Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 15/159 (9%)

Query: 23  VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA 82
           V D  D  G  A++TGA++GIG   A      G  V +  R + A + + + I       
Sbjct: 1   VLDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT--SGG 58

Query: 83  KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFA--TNH 140
           KV  +  D+S    V +   +   +   ++I + NAGI+    ML     E Q    TN 
Sbjct: 59  KVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNV 118

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGR----IINVSSEGH 175
            G FL       T +  A+    +G+    I   S  GH
Sbjct: 119 TGVFL-------TAQAAAKAMVKQGQGGVIINTASMSGH 150

Length = 253

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 17/147 (11%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            I+TG + G+G   A  L  +G HV+     I+  ++ + T + E  ++ +    LDL  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVI----SISRTENKELTKLAEQYNSNLTFHSLDLQD 59

Query: 94  LASVRNFASEYNIQHHQLNI----LINNAGIMGTPF----MLSKDNIELQFATNHLGHFL 145
           +  +    +E      + N+    LINNAG++  P         + +      N L   +
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMV-APIKPIEKAESEELITNVHLNLLAPMI 118

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           LT+     MK T      + R+IN+SS
Sbjct: 119 LTSTF---MKHTKDWK-VDKRVINISS 141

Length = 251

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDA 86
           D  G   ++TG ++G+G   A         VV+  R D     DV E I K     +  A
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIA 61

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTP-FMLSKDNIELQFATNHLGHF 144
           ++ D++  + V N       +   L+++INNAGI    P   +S ++      TN  G F
Sbjct: 62  VKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAF 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L +   +    +   K    G IIN+SS
Sbjct: 122 LGSREAIKYFVEHDIK----GNIINMSS 145

Length = 261

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 18/146 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TA++TGA+ GIG   AR LA     +++G R      ++      E+P A      +DL+
Sbjct: 5   TALITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAA----ELPGAT--PFPVDLT 57

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
              ++   A+        L++L++NAG+  +G     + D        N +    LT LL
Sbjct: 58  DPEAI---AAAVEQLGR-LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHR 176
           L  +    R + G    IN S  G R
Sbjct: 114 LPAL----RAAHGHVVFIN-SGAGLR 134

Length = 227

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 4/127 (3%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSS 93
           +VTGA+ GIG E A   A  G  V++  R+    + V + I +E     +   ++L   +
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCT 67

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---FATNHLGHFLLTNLL 150
             + +  A    + + +L+ +++NAG++G    LS+ N ++       N    F+LT  L
Sbjct: 68  SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQAL 127

Query: 151 LDTMKKT 157
           L  + K+
Sbjct: 128 LPLLLKS 134

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 9/104 (8%)

Query: 27  IDGSGL----TAIVTGAT-SGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEI 79
           + G GL      +VT A  +GIG+ TAR     G  VV  + DI      +  + +  E+
Sbjct: 9   VPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVV--ISDIHERRLGETADELAAEL 66

Query: 80  PSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT 123
              +V+A+  D++S A V         +  +L++L+NNAG+ G 
Sbjct: 67  GLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQ 110

Length = 262

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 46.4 bits (110), Expect = 3e-06
 Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 15/157 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   +VTGA  GIG   A  LA  G  V++  R      +V   I+             
Sbjct: 3   EGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILAA--GDAAHVHTA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFM-LSKDNIELQFATNHLGHFLL 146
           DL + A  +        +  ++++LINN G  I   P+    ++ IE +   +       
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSE----GHRLAY 179
              +L  M    R+    G I+NVSS      +R+ Y
Sbjct: 120 CRAVLPHM--LERQQ---GVIVNVSSIATRGIYRIPY 151

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G TA++TG TSGIG ETAR     G  V +  RD A+ +  +  +           +  D
Sbjct: 6   GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRAD 60

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFML-SKDNIELQFATNHLGHFLLTN 148
              +A+ +  A        +L+ +  NAG+    P     +   +  F TN  G + L  
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQ 120

Query: 149 LLL 151
            LL
Sbjct: 121 ALL 123

Length = 249

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 16/146 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHV-VMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
            G  A++TG T GIG   A      G  V V+        K+++E          V  ++
Sbjct: 6   KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK--------GVFTIK 57

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT-PF-MLSKDNIELQFATNHLGHFLL 146
            D+ +   V+        +  ++++L+NNAGIM   PF    ++        N  G    
Sbjct: 58  CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYT 117

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T   L  +K +       G I+N++S
Sbjct: 118 TYEFLPLLKLSKN-----GAIVNIAS 138

Length = 255

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 39/141 (27%), Positives = 53/141 (37%), Gaps = 31/141 (21%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TGA SGIG  TA +L   G  V+        G D++E  V             DLS
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVI--------GIDLREADVIA-----------DLS 41

Query: 93  SLASVRN-FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
           +        A         L+ L+N AG+ GT          L    N+ G   L   LL
Sbjct: 42  TPEGRAAAIADVLARCSGVLDGLVNCAGVGGTT------VAGLVLKVNYFGLRALMEALL 95

Query: 152 DTMKKTARKSGGEGRIINVSS 172
             ++K     G     + VSS
Sbjct: 96  PRLRK-----GHGPAAVVVSS 111

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 45.5 bits (108), Expect = 5e-06
 Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 14/145 (9%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD----AMEL 89
           A +TGA  G+G   AR +A +G  V   + DI       +    EI +A  +    A   
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVF--LTDINDA-AGLDAFAAEINAAHGEGVAFAAVQ 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++  A  +   ++       L++L+NNAG+   G    +  D      A N    FL  
Sbjct: 59  DVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGC 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  +     ++     I+N+SS
Sbjct: 119 KHALPYL-----RASQPASIVNISS 138

Length = 251

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 45.1 bits (106), Expect = 7e-06
 Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 20/158 (12%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL- 89
           G  A+VTGA+ GIG   A+ LA  G  V +        K+  E  V EI S    A  + 
Sbjct: 4   GKVALVTGASRGIGRAIAKRLANDGALVAI---HYGNRKEEAEETVYEIQSNGGSAFSIG 60

Query: 90  -DLSSLASVRNFASEYNIQ------HHQLNILINNAGIMGTPFM--LSKDNIELQFATNH 140
            +L SL  V    S  + +        + +ILINNAGI    F+   ++   +   + N 
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA 178
              F +    L  ++  +       RIIN+SS   R++
Sbjct: 121 KAPFFIIQQALSRLRDNS-------RIINISSAATRIS 151

Length = 252

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK--ETIVKEIPSA---KVDAMELD 90
           VTGA  GIG E A   A  G  V++       G+  +  E +  EI +A   +   + LD
Sbjct: 17  VTGAGDGIGREAALTYARHGATVIL------LGRTEEKLEAVYDEIEAAGGPQPAIIPLD 70

Query: 91  LSSLASVRNF---ASEYNIQHHQLNILINNAGIMG--TPF-MLSKDNIELQFATNHLGHF 144
           L + A+ +N+   A     Q  +L+ +++NAG++G   P      +  +     N    F
Sbjct: 71  LLT-ATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATF 129

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           +LT  LL  + K+         ++  SS
Sbjct: 130 MLTQALLPLLLKSP-----AASLVFTSS 152

Length = 247

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 45.0 bits (107), Expect = 8e-06
 Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 16/145 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--D 90
            A+VTGA   IG   A  LA  G  VV+      A       +  E+ + +  A+ +  D
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQ---RLKDELNALRNSAVLVQAD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN 148
           LS  A+  +  +       + ++L+NNA           S+D     F  N    +LL  
Sbjct: 59  LSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLI- 117

Query: 149 LLLDTMKKTAR--KSGGEGRIINVS 171
                 +  AR       G IIN+ 
Sbjct: 118 ------QAFARRLAGSRNGSIINII 136

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 44.9 bits (106), Expect = 9e-06
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 18/176 (10%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D +G  AI+TG  +G+G   A  LA  G  +V GV  +A   + +  +  E    K   +
Sbjct: 5   DLNGKVAIITGCNTGLGQGMAIGLAKAGADIV-GV-GVAEAPETQAQV--EALGRKFHFI 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFL 145
             DL     + +  S+       ++ILINNAGI+    +L     + +     N    F 
Sbjct: 61  TADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFF 120

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALL 201
           L+      + K   K G  G+IIN++S    L++  GIR      PS +   SA++
Sbjct: 121 LSQ----AVAKQFVKQGNGGKIINIAS---MLSFQGGIRV-----PSYTASKSAVM 164

Length = 251

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 26/159 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTG T GIG  T   L   G  VV              T  +  P    + +E 
Sbjct: 8   AGKRALVTGGTKGIGAATVARLLEAGARVV--------------TTARSRPDDLPEGVEF 53

Query: 90  ---DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FM-LSKDNIELQFATNHLG 142
              DL++       A     +   ++IL++  G    P   F  L+ +  + +   N L 
Sbjct: 54  VAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLA 113

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE 181
              L   LL  M   AR SG    II+V+S   RL   E
Sbjct: 114 AVRLDRALLPGM--IARGSGV---IIHVTSIQRRLPLPE 147

Length = 260

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 12/149 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAM 87
           SG  A+VTG++ GIG   A  LA  G  + +   + A  +   E   +EI +   K  A+
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAV---NYARSRKAAEETAEEIEALGRKALAV 59

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHFL 145
           + ++  +  ++   ++ + +  +L++ +NNA  G++     L + + +     N      
Sbjct: 60  KANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLF 119

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEG 174
                   M+K      G G+II++SS G
Sbjct: 120 CAQEAAKLMEKV-----GGGKIISLSSLG 143

Length = 250

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 13/150 (8%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
             TAIVTG   GIG  T R  A  G  V   V D+    +  E +  +I +      A  
Sbjct: 3   DKTAIVTGGGGGIGGATCRRFAEEGAKV--AVFDLNR--EAAEKVAADIRAKGGNAQAFA 58

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLL 146
            D++   SV    +        +++L+NNAG    G          E   A N  G   +
Sbjct: 59  CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHM 118

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
            + +L  M +      G GRI+N++S+  R
Sbjct: 119 HHAVLPGMVER-----GAGRIVNIASDAAR 143

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
            +     G  A++TGA+ GIG   A+  A  G  +V    DI   +++ +  +       
Sbjct: 3   ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIV--FNDIN--QELVDKGLAAYRELG 58

Query: 84  VDA--MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATN 139
           ++A     D++    V+   S+   +   ++IL+NNAGI+    ML  S ++       +
Sbjct: 59  IEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDID 118

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
               F+++  ++ +M K      G G+IIN+ S
Sbjct: 119 LNAPFIVSKAVIPSMIKK-----GHGKIINICS 146

Length = 265

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 31/156 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA  GIG   A   A  G  VV+  R      ++   +  E+ +A  +A+ L
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDR-----SELVHEVAAELRAAGGEALAL 61

Query: 90  --DLSSLA---SVRNFASEYNIQHHQLNILINNAG--IMGTPFM-LSKDNIELQ-----F 136
             DL + A   +    A E      ++++LINN G  I   PF    ++ IE +     F
Sbjct: 62  TADLETYAGAQAAMAAAVE---AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLF 118

Query: 137 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            T      +L ++L          + G G I+NVSS
Sbjct: 119 PTLWCCRAVLPHML----------AQGGGAIVNVSS 144

Length = 260

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 12/140 (8%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           +TGA SGIG ETA + A  G  V +   D      +   +  E   A      LD++  A
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGA----LDVTDRA 60

Query: 96  SVRNFASEYNIQHHQ-LNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLTNLLLD 152
           +     +++       L+ L NNAG+  G PF  +     +     N  G        L 
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALP 120

Query: 153 TMKKTARKSGGEGRIINVSS 172
            +K T        R+IN +S
Sbjct: 121 YLKATP-----GARVINTAS 135

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 4/101 (3%)

Query: 33  TAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMEL 89
           T +VTG   G+G E AR LA RG  H+V+  R  A   + +  +  E+ +  A+V  +  
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-AELEARGAEVTVVAC 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD 130
           D+S   +VR   +E       L  +I+ AG++    + +  
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMT 101

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 35/163 (21%)

Query: 26  GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 85
            +D +G   +VTG T GIG   AR     G  VV+  R             + +     +
Sbjct: 1   NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR----------RAPETVDGRPAE 50

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN--------IELQFA 137
               D+     V         +H +L++L+NNAG  G+P+ L+ +         +EL   
Sbjct: 51  FHAADVRDPDQVAALVDAIVERHGRLDVLVNNAG--GSPYALAAEASPRFHEKIVEL--- 105

Query: 138 TNHLGHFLL---TNLLLDTMKKTARKSGGEGRIINVSSE-GHR 176
            N L   L+    N ++       ++ GG G I+N+ S  G R
Sbjct: 106 -NLLAPLLVAQAANAVMQ------QQPGG-GSIVNIGSVSGRR 140

Length = 252

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   +VTGA  GIG E AR L  RG  + +   + A    +   +       +V  +  D
Sbjct: 9   GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG---GDDRVLTVVAD 65

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI 120
           ++ LA+++  A E   +   +++++ NAGI
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGI 95

Length = 296

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 27/155 (17%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  A+VTG T GIG   A  LA +G+++V+  R+    KDV ++I  +    ++  + +D
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM-------------LSKDNIELQFA 137
            S          +  I+   + +LINN G +  P+              L K N+E    
Sbjct: 113 FSGDIDEGVKRIKETIEGLDVGVLINNVG-VSYPYARFFHEVDEELLKNLIKVNVE---G 168

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           T  +   +L  +L        RK G    IIN+ S
Sbjct: 169 TTKVTQAVLPGML-------KRKKGA---IINIGS 193

Length = 320

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEIPSAKVDAMELDLS 92
           +VTGAT+G G    R    +G H V     IA G  ++  + +  E+    +   +LD+ 
Sbjct: 4   LVTGATAGFGECITRRFIQQG-HKV-----IATGRRQERLQELKDEL-GDNLYIAQLDVR 56

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           + A++    +    +   +++L+NNAG+   +      S ++ E    TN+ G   +T  
Sbjct: 57  NRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           +L  M +        G IIN+ S      Y  G
Sbjct: 117 VLPGMVERNH-----GHIINIGSTAGSWPYAGG 144

Length = 248

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 19/150 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             +VTGA+ G+G   AR  A  G  VV+   +     +  E +  E    +  A++ D+ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVV---NYYRSTESAEAVAAEA-GERAIAIQADVR 57

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFM----LSKDNIELQFATNHL-----GH 143
               V+    E       ++ ++NNA ++  PF      + D I+ +     L     G 
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGA 116

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSSE 173
             L   +L   K+      G GR+IN+ + 
Sbjct: 117 LNLLQAVLPDFKER-----GSGRVINIGTN 141

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 27/153 (17%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET---IVKEIPSAKVDAM 87
           G  A++TG  SGIG   A + A  G  + +   D    +D  ET   + KE    K   +
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD--EHEDANETKQRVEKE--GVKCLLI 101

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE--------LQFATN 139
             D+S  A  ++   E   +  +L+IL+NNA      F   + ++E          F TN
Sbjct: 102 PGDVSDEAFCKDAVEETVRELGRLDILVNNAA-----FQYPQQSLEDITAEQLDKTFKTN 156

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
              +F +T   L  +     K G    IIN  S
Sbjct: 157 IYSYFHMTKAALPHL-----KQGSA--IINTGS 182

Length = 290

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 31  GLTAIVTGAT--SGIGTETARVLALRGVHVVMGV-----RDIAAGKDVKETIV--KEIPS 81
              A+VTG +   GIG    + LA  G  +         +++  G D  E I   +E+  
Sbjct: 6   NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK 65

Query: 82  --AKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPF-MLSKDNIELQFA 137
              KV +MELDL+   + +   ++   Q    +IL+NNA       F  L+ + ++  + 
Sbjct: 66  NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYM 125

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N     LL+       +   +KSG  GRIIN++S
Sbjct: 126 VNVRATTLLS---SQFARGFDKKSG--GRIINMTS 155

Length = 256

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 25  DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
           DG  G G  A++TG  SGIG  T    A RG  VV+G  D    K      V  + +   
Sbjct: 2   DGFPGRG--AVITGGASGIGLATGTEFARRGARVVLGDVD----KPGLRQAVNHLRAEGF 55

Query: 85  DA--MELDLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           D   +  D+     V + A E       ++++ +NAGI+
Sbjct: 56  DVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIV 94

Length = 275

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 9/137 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSAKVDA 86
           SG T  +TGA+ GIG   A   A  G ++V+  +       +  TI    +EI +A   A
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQA 64

Query: 87  M--ELDLSSLASVRNFASEYNIQHH-QLNILINNAG-IMGTPF-MLSKDNIELQFATNHL 141
           +    D+     V   A    ++    ++I +NNA  I  T          +L    N  
Sbjct: 65  LPLVGDVRDEDQVAA-AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVR 123

Query: 142 GHFLLTNLLLDTMKKTA 158
           G FL++   L  +KK+ 
Sbjct: 124 GTFLVSQACLPHLKKSE 140

Length = 273

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA  GIG   A+ L   G  V +   +    +   + + K+   A   A++ D+S 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAI--AVKADVSD 62

Query: 94  LASVRNFASEYNIQHH--QLNILINNAGIM-GTPF-MLSKDNIELQFATNHLGHFLLTNL 149
              V  FA+   +      LN+++NNAG+   TP   ++++  +  +  N  G       
Sbjct: 63  RDQV--FAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQA 120

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
             +  KK     G  G+IIN +S+    A   G
Sbjct: 121 AQEAFKKL----GHGGKIINATSQ----AGVVG 145

Length = 256

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELD 90
           T +V GAT  IG    R L  RG +VV   R+ +   GK+ KE   KE+P A+V  +  D
Sbjct: 62  TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEV--VFGD 119

Query: 91  LSSLASVR 98
           ++   S+R
Sbjct: 120 VTDADSLR 127

Length = 390

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 21/151 (13%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM--ELDLS 92
           ++TG   G+G   A  LA +G  + +    I   ++  E  V E  +   +      +++
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLAL----IDLNQEKLEEAVAECGALGTEVRGYAANVT 64

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML-----------SKDNIELQFATNHL 141
               V    ++      QLN LINNAGI+    ++           S +  +     N  
Sbjct: 65  DEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLT 124

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           G FL        M ++  K    G IIN+SS
Sbjct: 125 GVFLCGREAAAKMIESGSK----GVIINISS 151

Length = 253

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 9e-04
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TGA+SGIG  TA   A RG  +V+  RD  A + V E        A+V  +  D++  
Sbjct: 11  VITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDA 68

Query: 95  ASVRNFASEYNIQHHQLNILINNAGI 120
             V+  A++      ++++ +NN G+
Sbjct: 69  DQVKALATQAASFGGRIDVWVNNVGV 94

Length = 330

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 23/149 (15%)

Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
             +G   +V G + GIG    R     G +V       A  KD  E + +E  +  V   
Sbjct: 3   AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRF---TYAGSKDAAERLAQETGATAVQTD 59

Query: 88  ELDLSSLAS-VRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATN-HLGH 143
             D  ++   VR   +        L+IL+ NAGI   G    L  D+I+  F  N H  +
Sbjct: 60  SADRDAVIDVVRKSGA--------LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPY 111

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
                       + AR+    GRII + S
Sbjct: 112 HASV--------EAARQMPEGGRIIIIGS 132

Length = 237

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             I+TG +SG+G   A+  A  G +VV+  R     ++ K  I  E    +V  +++D+ 
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQVLTVQMDVR 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNA 118
           +   V+    + + +  +++ LINNA
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 24/184 (13%)

Query: 23  VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA 82
           + D     G  A+VTG  +G+G   A  LA  G  +V G+ +I    +  E +       
Sbjct: 2   ILDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIV-GI-NIVEPTETIEQV--TALGR 57

Query: 83  KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLG 142
           +  ++  DL  +  +         +   ++IL+NNAG++       +    ++F+     
Sbjct: 58  RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLI-------RREDAIEFSEKDWD 110

Query: 143 HFLLTNL-----LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQS 197
             +  N+     +     K     G  G+IIN++S    L++  GIR      PS +   
Sbjct: 111 DVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS---MLSFQGGIRV-----PSYTASK 162

Query: 198 SALL 201
           S ++
Sbjct: 163 SGVM 166

Length = 253

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 37.5 bits (88), Expect = 0.002
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)

Query: 33  TAIVTGATSGIGTETARVLALRGV-HVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           T ++TG   G+G   AR LA RG   +V +      A          E   A+V  +  D
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI 120
           ++   ++    +        L  +I+ AG+
Sbjct: 62  VADRDALAAVLAAIPAVEGPLTGVIHAAGV 91

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 28/148 (18%)

Query: 35  IVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           IVTG  SGIG   +  LA  G + V+ G R     +  +E +    P A+   +++DL+ 
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEE-LRALQPRAEF--VQVDLTD 66

Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT---------NHLGHF 144
            A  R+   +   +  +++ L+NNAG+         D + L+            N + ++
Sbjct: 67  DAQCRDAVEQTVAKFGRIDGLVNNAGV--------NDGVGLEAGREAFVASLERNLIHYY 118

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           ++ +  L  +K +       G I+N+SS
Sbjct: 119 VMAHYCLPHLKAS------RGAIVNISS 140

Length = 258

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 12/147 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A VTGA SGIG   A  LA  G  V +         D      + I +A   A+++
Sbjct: 7   DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDL---RTDDGLAETAEHIEAAGRRAIQI 63

Query: 90  --DLSSLASVRNFASEYNIQHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFL 145
             D++S A +R   +    +   L + +N AGI        + ++  +     N  G FL
Sbjct: 64  AADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFL 123

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
                   M     ++GG G I+N++S
Sbjct: 124 SCQAEARAM----LENGG-GSIVNIAS 145

Length = 254

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 16/144 (11%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           +V GA  GIG   AR +   G  V++   +    +   +T+ +      V   E+D+SS 
Sbjct: 6   VVIGA-GGIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSR 61

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 154
            SV+  A         +  L++ AG+  +P   S+ + E     +  G    T L+L+  
Sbjct: 62  ESVKALA-ATAQTLGPVTGLVHTAGV--SP---SQASPEAILKVDLYG----TALVLEEF 111

Query: 155 KKTARKSGGEGRIINVSSEGHRLA 178
            K     GG G +I  S  GHRL 
Sbjct: 112 GKVI-APGGAGVVIA-SQSGHRLP 133

Length = 275

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 4/104 (3%)

Query: 36  VTGATSGIGTETARVLALR-GVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAM--ELDL 91
           VTG   GIG   AR LA R G  +V+ G   +   ++ K   +  + +     +    D+
Sbjct: 210 VTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADV 269

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ 135
           +  A+VR    +   ++  ++ +I+ AG++    +  K   + +
Sbjct: 270 TDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFE 313

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 85
           ID SG  A  T ++ GIG   ARVLA  G  V++  R+    K  +E I K   +  V 
Sbjct: 3  KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKI-KSESNVDVS 61

Query: 86 AMELDLS 92
           +  DL+
Sbjct: 62 YIVADLT 68

Length = 263

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 19/150 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   +V+G   G+G   A   A  G  VV+  R      +V      EI      A+ +
Sbjct: 4   KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA----AEIDDLGRRALAV 59

Query: 90  --DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FATNHLG 142
             D++      N  +    +  +++ L+NNA  +  P M    + +          N LG
Sbjct: 60  PTDITDEDQCANLVALALERFGRVDALVNNAFRV--PSMKPLADADFAHWRAVIELNVLG 117

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
              LT      + ++       G I+ ++S
Sbjct: 118 TLRLTQAFTPALAES------GGSIVMINS 141

Length = 258

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 25/86 (29%), Positives = 44/86 (51%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TGA+SG+G   AR  A +G  + +  R     +++K  ++   P  KV    LD++  
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 95  ASVRNFASEYNIQHHQLNILINNAGI 120
             V    +E+  +   L+ +I NAGI
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVNAGI 91

Length = 248

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELDL 91
           A VTG   GIGT   + L   G  VV G          +   +++  +   D  A E ++
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKVVAGC---GPNSPRRVKWLEDQKALGFDFIASEGNV 62

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNL 149
               S +    +   +  ++++L+NNAGI        +++++      TN    F +T  
Sbjct: 63  GDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQ 122

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
           ++D M +      G GRIIN+SS
Sbjct: 123 VIDGMVER-----GWGRIINISS 140

Length = 246

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 23/143 (16%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T +VTGAT GIG   +  LA  G  V+ G+   A      E    ++   +  A     +
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVI-GIARSAIDDFPGELFACDLADIEQTA-----A 58

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLG---HFLLTNL 149
           +LA +         + H ++ ++NN GI   P  L K ++        L       +T  
Sbjct: 59  TLAQIN--------EIHPVDAIVNNVGIA-LPQPLGKIDLAALQDVYDLNVRAAVQVTQA 109

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
            L+ MK        +GRI+N+ S
Sbjct: 110 FLEGMKLR-----EQGRIVNICS 127

Length = 234

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 32  LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELD 90
           L   +TGA+SGIG   AR  A +G    +G+  +A   D  +     +P +A+V     D
Sbjct: 3   LKVFITGASSGIGQALAREYARQG--ATLGL--VARRTDALQAFAARLPKAARVSVYAAD 58

Query: 91  LSSLASVRNFASEYNIQHHQL-NILINNAGI 120
           +    ++   A+++ I  H L +++I NAGI
Sbjct: 59  VRDADALAAAAADF-IAAHGLPDVVIANAGI 88

Length = 257

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 12/95 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAM 87
           SG  A+VTGA+ GIG   A  L   G  V +  R I           +EI +   K   +
Sbjct: 2   SGKIALVTGASRGIGRGIALQLGEAGATVYITGRTI---LPQLPGTAEEIEARGGKCIPV 58

Query: 88  ELDLSSLASVRNF----ASEYNIQHHQLNILINNA 118
             D S    V       A E   Q  +L+IL+NNA
Sbjct: 59  RCDHSDDDEVEALFERVARE---QQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	216
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.98
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.98
PRK07063	260	short chain dehydrogenase; Provisional	99.98
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK05854	313	short chain dehydrogenase; Provisional	99.97
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06139	330	short chain dehydrogenase; Provisional	99.97
PRK08303	305	short chain dehydrogenase; Provisional	99.97
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.97
PRK05876	275	short chain dehydrogenase; Provisional	99.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.97
PRK07791	286	short chain dehydrogenase; Provisional	99.97
PRK07478	254	short chain dehydrogenase; Provisional	99.97
PRK08589	272	short chain dehydrogenase; Validated	99.97
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
KOG0725	270	consensus Reductases with broad range of substrate	99.97
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
KOG1208	314	consensus Dehydrogenases with different specificit	99.97
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK05872	296	short chain dehydrogenase; Provisional	99.97
PRK05867	253	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK07109	334	short chain dehydrogenase; Provisional	99.97
PRK06398	258	aldose dehydrogenase; Validated	99.97
PRK06114	254	short chain dehydrogenase; Provisional	99.97
PRK06197	306	short chain dehydrogenase; Provisional	99.97
PRK08862	227	short chain dehydrogenase; Provisional	99.97
PLN02253	280	xanthoxin dehydrogenase	99.97
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.97
PRK08265	261	short chain dehydrogenase; Provisional	99.97
PRK06194	287	hypothetical protein; Provisional	99.97
PRK09186	256	flagellin modification protein A; Provisional	99.97
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.97
PRK09242	257	tropinone reductase; Provisional	99.97
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.97
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK05717	255	oxidoreductase; Validated	99.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.97
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.97
PRK07831	262	short chain dehydrogenase; Provisional	99.97
PRK07035	252	short chain dehydrogenase; Provisional	99.96
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.96
PRK06128	300	oxidoreductase; Provisional	99.96
PRK07825	273	short chain dehydrogenase; Provisional	99.96
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.96
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07985	294	oxidoreductase; Provisional	99.96
PRK06172	253	short chain dehydrogenase; Provisional	99.96
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.96
PRK05599	246	hypothetical protein; Provisional	99.96
PRK07677	252	short chain dehydrogenase; Provisional	99.96
PRK08278	273	short chain dehydrogenase; Provisional	99.96
PRK06196	315	oxidoreductase; Provisional	99.96
PLN02780	320	ketoreductase/ oxidoreductase	99.96
PRK05866	293	short chain dehydrogenase; Provisional	99.96
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PRK07576	264	short chain dehydrogenase; Provisional	99.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.96
PRK12747	252	short chain dehydrogenase; Provisional	99.96
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.96
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.96
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.96
PRK07890	258	short chain dehydrogenase; Provisional	99.96
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.96
PRK08643	256	acetoin reductase; Validated	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.96
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.96
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07814	263	short chain dehydrogenase; Provisional	99.96
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.96
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.96
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.96
PRK05855	582	short chain dehydrogenase; Validated	99.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.96
PRK07024	257	short chain dehydrogenase; Provisional	99.96
PRK08628	258	short chain dehydrogenase; Provisional	99.96
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06523	260	short chain dehydrogenase; Provisional	99.96
PRK07067	257	sorbitol dehydrogenase; Provisional	99.96
PRK07856	252	short chain dehydrogenase; Provisional	99.96
PRK05650	270	short chain dehydrogenase; Provisional	99.96
PRK06125	259	short chain dehydrogenase; Provisional	99.96
PRK06180	277	short chain dehydrogenase; Provisional	99.96
PRK06182	273	short chain dehydrogenase; Validated	99.96
PRK08251	248	short chain dehydrogenase; Provisional	99.96
PRK06483	236	dihydromonapterin reductase; Provisional	99.95
PRK06179	270	short chain dehydrogenase; Provisional	99.95
PRK06484	520	short chain dehydrogenase; Validated	99.95
PRK05993	277	short chain dehydrogenase; Provisional	99.95
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.95
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK06138	252	short chain dehydrogenase; Provisional	99.95
PRK06841	255	short chain dehydrogenase; Provisional	99.95
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.95
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.95
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.95
PRK12939	250	short chain dehydrogenase; Provisional	99.95
PRK07904	253	short chain dehydrogenase; Provisional	99.95
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.95
PLN00015	308	protochlorophyllide reductase	99.95
PRK08263	275	short chain dehydrogenase; Provisional	99.95
PRK12743	256	oxidoreductase; Provisional	99.95
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK08226	263	short chain dehydrogenase; Provisional	99.95
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
PRK07774	250	short chain dehydrogenase; Provisional	99.95
PRK06500	249	short chain dehydrogenase; Provisional	99.95
PRK08703	239	short chain dehydrogenase; Provisional	99.95
PRK08267	260	short chain dehydrogenase; Provisional	99.95
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK09134	258	short chain dehydrogenase; Provisional	99.95
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK09072	263	short chain dehydrogenase; Provisional	99.95
PRK07454	241	short chain dehydrogenase; Provisional	99.95
PRK06914	280	short chain dehydrogenase; Provisional	99.95
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.95
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.95
PRK05875	276	short chain dehydrogenase; Provisional	99.95
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07832	272	short chain dehydrogenase; Provisional	99.95
PRK06949	258	short chain dehydrogenase; Provisional	99.95
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK06701	290	short chain dehydrogenase; Provisional	99.95
PRK07069	251	short chain dehydrogenase; Validated	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.95
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.95
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.95
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.95
PRK10538	248	malonic semialdehyde reductase; Provisional	99.94
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.94
PRK12937	245	short chain dehydrogenase; Provisional	99.94
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PRK05693	274	short chain dehydrogenase; Provisional	99.94
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.94
PRK06057	255	short chain dehydrogenase; Provisional	99.94
PRK12744	257	short chain dehydrogenase; Provisional	99.94
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.94
PRK06123	248	short chain dehydrogenase; Provisional	99.94
PRK06198	260	short chain dehydrogenase; Provisional	99.94
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.94
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.94
PRK06940	275	short chain dehydrogenase; Provisional	99.94
PRK06181	263	short chain dehydrogenase; Provisional	99.94
PRK12746	254	short chain dehydrogenase; Provisional	99.94
COG1028	251	FabG Dehydrogenases with different specificities (	99.94
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.94
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.94
PRK07201	657	short chain dehydrogenase; Provisional	99.94
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.94
PRK07102	243	short chain dehydrogenase; Provisional	99.94
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.94
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.94
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.94
PRK07326	237	short chain dehydrogenase; Provisional	99.93
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.93
PRK12827	249	short chain dehydrogenase; Provisional	99.93
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.93
PRK12828	239	short chain dehydrogenase; Provisional	99.93
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.93
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK09135	249	pteridine reductase; Provisional	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK05884	223	short chain dehydrogenase; Provisional	99.93
PRK06101	240	short chain dehydrogenase; Provisional	99.93
PRK12742	237	oxidoreductase; Provisional	99.92
PRK09291	257	short chain dehydrogenase; Provisional	99.92
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK08324	681	short chain dehydrogenase; Validated	99.92
PRK07074	257	short chain dehydrogenase; Provisional	99.92
PRK12829	264	short chain dehydrogenase; Provisional	99.92
PRK07060	245	short chain dehydrogenase; Provisional	99.92
PRK06924	251	short chain dehydrogenase; Provisional	99.92
PRK07023	243	short chain dehydrogenase; Provisional	99.92
PRK08264	238	short chain dehydrogenase; Validated	99.92
PRK07577	234	short chain dehydrogenase; Provisional	99.92
PRK12367	245	short chain dehydrogenase; Provisional	99.92
PRK08177	225	short chain dehydrogenase; Provisional	99.92
PRK07806	248	short chain dehydrogenase; Provisional	99.92
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.91
PRK07578	199	short chain dehydrogenase; Provisional	99.91
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08017	256	oxidoreductase; Provisional	99.91
PRK07041	230	short chain dehydrogenase; Provisional	99.91
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.9
PRK06953	222	short chain dehydrogenase; Provisional	99.9
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.89
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.89
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.88
PRK08219	227	short chain dehydrogenase; Provisional	99.87
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.87
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.87
PRK06720	169	hypothetical protein; Provisional	99.86
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.86
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.85
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.85
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.84
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.84
PLN02653	340	GDP-mannose 4,6-dehydratase	99.84
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.82
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.8
PLN02572	442	UDP-sulfoquinovose synthase	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.79
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.78
PLN02214	342	cinnamoyl-CoA reductase	99.77
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.77
PLN02650	351	dihydroflavonol-4-reductase	99.76
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.76
PLN00198	338	anthocyanidin reductase; Provisional	99.76
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.75
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.74
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.73
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.73
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.73
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.73
PLN02583	297	cinnamoyl-CoA reductase	99.73
PLN03209	576	translocon at the inner envelope of chloroplast su	99.72
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.72
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.72
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.71
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.7
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.69
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.69
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.66
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.64
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.64
PLN02427	386	UDP-apiose/xylose synthase	99.64
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.64
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.63
PLN02686	367	cinnamoyl-CoA reductase	99.62
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.6
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.59
PLN02260	668	probable rhamnose biosynthetic enzyme	99.59
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.59
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.58
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.58
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.58
PLN02206	442	UDP-glucuronate decarboxylase	99.58
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.57
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.57
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.57
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.56
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.53
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.51
PLN02778	298	3,5-epimerase/4-reductase	99.5
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.47
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.46
PRK07201	657	short chain dehydrogenase; Provisional	99.41
CHL00194	317	ycf39 Ycf39; Provisional	99.4
PLN02996	491	fatty acyl-CoA reductase	99.37
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.36
PLN02260	668	probable rhamnose biosynthetic enzyme	99.36
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.34
PRK05865	854	hypothetical protein; Provisional	99.31
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.29
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.27
PRK08309	177	short chain dehydrogenase; Provisional	99.2
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.19
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.14
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.14
PLN02503	605	fatty acyl-CoA reductase 2	99.13
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.12
PRK12320	699	hypothetical protein; Provisional	99.06
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.99
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.97
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.96
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.91
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	98.82
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.82
PLN00016	378	RNA-binding protein; Provisional	98.81
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.74
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.71
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.7
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.68
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.65
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.62
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.61
COG2910	211	Putative NADH-flavin reductase [General function p	98.6
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.6
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.5
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.45
PRK09620	229	hypothetical protein; Provisional	98.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.35
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.27
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.25
PTZ00325	321	malate dehydrogenase; Provisional	98.23
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.22
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.18
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.16
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.16
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.09
PLN00106	323	malate dehydrogenase	98.09
KOG2774	366	consensus NAD dependent epimerase [General functio	98.06
PRK14982	340	acyl-ACP reductase; Provisional	98.04
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.97
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.96
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.83
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.77
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.75
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.74
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.73
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.7
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.67
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.65
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.65
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.64
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.63
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.63
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.58
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.57
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.55
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.55
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.54
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.54
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.51
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.51
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.49
PRK06849	389	hypothetical protein; Provisional	97.47
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.47
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.47
PRK05086	312	malate dehydrogenase; Provisional	97.43
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.42
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.38
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.37
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.34
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.33
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.33
COG3268	382	Uncharacterized conserved protein [Function unknow	97.32
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.27
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.26
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.26
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.25
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.24
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.23
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.23
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.22
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.22
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.22
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.2
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.18
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.18
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.18
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.17
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	97.17
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.17
PRK08223	287	hypothetical protein; Validated	97.14
PTZ00117	319	malate dehydrogenase; Provisional	97.14
PRK08328	231	hypothetical protein; Provisional	97.13
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.12
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.12
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.1
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.09
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.08
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.06
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.05
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.05
PRK14968	188	putative methyltransferase; Provisional	97.05
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.03
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.02
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.02
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.01
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.01
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.94
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.93
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.91
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.9
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.89
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.89
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.89
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.85
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.84
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.84
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.84
PLN02602	350	lactate dehydrogenase	96.83
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.82
PRK09496	453	trkA potassium transporter peripheral membrane com	96.8
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.78
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.77
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.77
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.75
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.75
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.73
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.73
PLN00203	519	glutamyl-tRNA reductase	96.66
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.64
PRK14851	679	hypothetical protein; Provisional	96.63
PRK07411	390	hypothetical protein; Validated	96.63
PRK05442	326	malate dehydrogenase; Provisional	96.62
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.62
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.62
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.61
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.61
PRK06223	307	malate dehydrogenase; Reviewed	96.59
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.59
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.59
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.58
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.57
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.56
PRK04148	134	hypothetical protein; Provisional	96.54
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.54
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.54
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.53
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.51
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.51
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.51
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.49
PRK12480	330	D-lactate dehydrogenase; Provisional	96.49
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.48
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.45
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.45
PRK13243	333	glyoxylate reductase; Reviewed	96.44
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.43
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.41
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.4
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.39
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.36
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.35
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.32
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.32
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.29
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	96.28
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.28
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.27
PRK06487	317	glycerate dehydrogenase; Provisional	96.27
PLN02740	381	Alcohol dehydrogenase-like	96.25
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.22
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.21
PLN02928	347	oxidoreductase family protein	96.21
PRK14852	989	hypothetical protein; Provisional	96.21
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.2
PRK08655	437	prephenate dehydrogenase; Provisional	96.17
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.16
PRK09496	453	trkA potassium transporter peripheral membrane com	96.14
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.13
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.11
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.09
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.08
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.07
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.05
PLN03139	386	formate dehydrogenase; Provisional	96.02
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.02
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.0
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.99
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	95.97
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.94
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.94
PRK07877	722	hypothetical protein; Provisional	95.91
PLN02514	357	cinnamyl-alcohol dehydrogenase	95.91
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.9
PLN02494	477	adenosylhomocysteinase	95.9
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.89
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.89
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.87
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	95.83
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.8
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.78
PRK06932	314	glycerate dehydrogenase; Provisional	95.77
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.77
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.76
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.76
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.75
PRK07574	385	formate dehydrogenase; Provisional	95.75
PRK10669	558	putative cation:proton antiport protein; Provision	95.74
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.73
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.72
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.72
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.7
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.69
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.68
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.64
PTZ00354	334	alcohol dehydrogenase; Provisional	95.62
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.62
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.61
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.58
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.56
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.54

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.5e-38  Score=252.16  Aligned_cols=175  Identities=27%  Similarity=0.262  Sum_probs=160.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .+..+.||+|+|||||+|||.++|++|+.+|++++++.|+.++++...+++++..+..++..++||++|.+++++.++++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999999999999999886667999999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      ..++|++|+||||||+..  +..+.+.+++.++|++|++|++.++|+++|.|+++     +.|+||++||++|..+.|..
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-----~~GhIVvisSiaG~~~~P~~  160 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-----NDGHIVVISSIAGKMPLPFR  160 (282)
T ss_pred             HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-----CCCeEEEEeccccccCCCcc
Confidence            999999999999999974  44567889999999999999999999999999986     46999999999999998776


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                      .          .|++||+|+.+|...|+...+
T Consensus       161 ~----------~Y~ASK~Al~~f~etLR~El~  182 (282)
T KOG1205|consen  161 S----------IYSASKHALEGFFETLRQELI  182 (282)
T ss_pred             c----------ccchHHHHHHHHHHHHHHHhh
Confidence            5          899999999999999987654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=1.7e-36  Score=237.09  Aligned_cols=166  Identities=28%  Similarity=0.307  Sum_probs=152.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|+++|||||+|||.++|++|+++|++|++++|+.+++++..+++.+    ..+.....|++|.++++++++.+.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            46679999999999999999999999999999999999998888777743    56889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      |+++|+||||||..  .+..+.+.++|++++++|++|.++.+++++|.|.++     +.|.|||+||.+|..++|+..  
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-----~~G~IiN~~SiAG~~~y~~~~--  151 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-----KSGHIINLGSIAGRYPYPGGA--  151 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-----CCceEEEeccccccccCCCCc--
Confidence            99999999999986  566788999999999999999999999999999997     788999999999999988877  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              .|+.+|++..+|...++.-
T Consensus       152 --------vY~ATK~aV~~fs~~LR~e  170 (246)
T COG4221         152 --------VYGATKAAVRAFSLGLRQE  170 (246)
T ss_pred             --------cchhhHHHHHHHHHHHHHH
Confidence                    8899999999999888754

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1e-34  Score=232.64  Aligned_cols=170  Identities=27%  Similarity=0.339  Sum_probs=159.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.+++++|||||+|||.++|++|+++|++|++++|+.+++++..+++...+ +..+.++.+|+++++++.++.+++.+.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999999999999999887 778999999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      .+.||+||||||..  +++.+.+.++.++++++|+.++..++++++|.|.++     +.|.||||+|.+|..+.|...  
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-----~~G~IiNI~S~ag~~p~p~~a--  154 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-----GAGHIINIGSAAGLIPTPYMA--  154 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechhhcCCCcchH--
Confidence            89999999999986  577889999999999999999999999999999987     789999999999999876665  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              .|++||+++.+|...|+...
T Consensus       155 --------vY~ATKa~v~~fSeaL~~EL  174 (265)
T COG0300         155 --------VYSATKAFVLSFSEALREEL  174 (265)
T ss_pred             --------HHHHHHHHHHHHHHHHHHHh
Confidence                    89999999999999988654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.8e-33  Score=225.55  Aligned_cols=169  Identities=23%  Similarity=0.296  Sum_probs=156.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.-+.+|++||||||++|||+++|.+|+++|++++++|.+.+..+++.++++..  + ++..+.||+++.+++.+..+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999999999999999876  3 7999999999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +++.|.+|+||||||+.  .+..+.+.+++++++++|+.|.|..+|+++|.|.+.     ..|+||+++|.+|..|.++.
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-----~~GHIV~IaS~aG~~g~~gl  183 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-----NNGHIVTIASVAGLFGPAGL  183 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-----CCceEEEehhhhcccCCccc
Confidence            99999999999999997  466789999999999999999999999999999986     78999999999999997776


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .          .|++||+|..+++.++..
T Consensus       184 ~----------~YcaSK~a~vGfhesL~~  202 (300)
T KOG1201|consen  184 A----------DYCASKFAAVGFHESLSM  202 (300)
T ss_pred             h----------hhhhhHHHHHHHHHHHHH
Confidence            6          888999999999888764

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-31  Score=216.19  Aligned_cols=170  Identities=25%  Similarity=0.224  Sum_probs=148.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... +.++.++++|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999888777777776543 4578899999999999999999985


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                       +++++|++|||||..  .+..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||.++..+.++..
T Consensus        82 -~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-----~~g~Ii~isS~~~~~~~~~~~  155 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-----GFGRIIYSTSVAIKEPIPNIA  155 (263)
T ss_pred             -hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEcCccccCCCCcch
Confidence             589999999999975  345578999999999999999999999999999875     578999999998876654433


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                .|+.+|+++++|++.++..
T Consensus       156 ----------~y~asKaal~~l~~~la~e  174 (263)
T PRK08339        156 ----------LSNVVRISMAGLVRTLAKE  174 (263)
T ss_pred             ----------hhHHHHHHHHHHHHHHHHH
Confidence                      7999999999999998764

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-31  Score=213.41  Aligned_cols=172  Identities=23%  Similarity=0.211  Sum_probs=153.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...+++.++.++.+|++|++++.++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888888888777666688899999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|++|||||..  .+..+.+.++|.+.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++. 
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~-  156 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-----AAASIVCVNSLLALQPEPHM-  156 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----CCcEEEEeccccccCCCCCc-
Confidence            9999999999999985  345577889999999999999999999999999875     57899999999888765443 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+++|+++.+|++.++..
T Consensus       157 ---------~~y~asKaal~~~~~~la~e  176 (265)
T PRK07062        157 ---------VATSAARAGLLNLVKSLATE  176 (265)
T ss_pred             ---------hHhHHHHHHHHHHHHHHHHH
Confidence                     37999999999999988754

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.98  E-value=3.1e-31  Score=201.16  Aligned_cols=163  Identities=27%  Similarity=0.271  Sum_probs=143.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.|.++|||||++|||+++|++|.+.|-+||+++|+++.+++++.+      .+.+....||+.|.+++++++++++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHhh
Confidence            46788999999999999999999999999999999998887776654      456889999999999999999999999


Q ss_pred             cCCccEEEECCccCCCC----CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          108 HHQLNILINNAGIMGTP----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      |..+++||||||+....    .+...++.++.+++|+.+|+.+++.++|++.++     +.+.||++||..++.|+    
T Consensus        76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-----~~a~IInVSSGLafvPm----  146 (245)
T COG3967          76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-----PEATIINVSSGLAFVPM----  146 (245)
T ss_pred             CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-----CCceEEEeccccccCcc----
Confidence            99999999999997432    234567778899999999999999999999987     68999999999999974    


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            ...+.|+.+||++..++-+|+.
T Consensus       147 ------~~~PvYcaTKAaiHsyt~aLR~  168 (245)
T COG3967         147 ------ASTPVYCATKAAIHSYTLALRE  168 (245)
T ss_pred             ------cccccchhhHHHHHHHHHHHHH
Confidence                  4445888999999988888775

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=1.3e-30  Score=213.60  Aligned_cols=165  Identities=16%  Similarity=0.176  Sum_probs=139.2

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|+++||||+  +|||+++|+.|+++|++|++++|+.+ .++..+++..+.+. . .++++|++|+++++++++++.
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHH
Confidence            3578999999997  79999999999999999999999853 33344455444422 3 578999999999999999999


Q ss_pred             hhcCCccEEEECCccC------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          106 IQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +.++++|+||||||+.      .+..+.+.++|+++|++|+.+++.+++.++|.|.+       +|+||++||.++..+.
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-------~g~Iv~isS~~~~~~~  151 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-------GASVLTLSYLGGVKYV  151 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-------CCcEEEEecCCCccCC
Confidence            9999999999999975      24557889999999999999999999999999964       4799999998877654


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |.+          ..|+.||+++.+|++.++..
T Consensus       152 ~~~----------~~Y~asKaal~~l~~~la~e  174 (274)
T PRK08415        152 PHY----------NVMGVAKAALESSVRYLAVD  174 (274)
T ss_pred             Ccc----------hhhhhHHHHHHHHHHHHHHH
Confidence            443          37999999999999998753

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.8e-30  Score=210.61  Aligned_cols=171  Identities=27%  Similarity=0.332  Sum_probs=150.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++....++.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888888777776543356788999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||..  .+..+.+.++|++.+++|+.+++.++++++|.|.++     +.|+||++||..+..+.++.. 
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~-  156 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-----GRGSIVNIASTHAFKIIPGCF-  156 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-----CCeEEEEECChhhccCCCCch-
Confidence            999999999999975  344567889999999999999999999999999875     568999999998877655433 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+.||+++++|++.++..
T Consensus       157 ---------~Y~~sKaa~~~~~~~la~e  175 (260)
T PRK07063        157 ---------PYPVAKHGLLGLTRALGIE  175 (260)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHH
Confidence                     7999999999999998654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.3e-30  Score=210.25  Aligned_cols=170  Identities=14%  Similarity=0.135  Sum_probs=141.1

Q ss_pred             cCCCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      |.+..++++|+++||||+  +|||.++|++|+++|++|++++|+.+. .+..+++..+.  ....++++|++|+++++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEEL--DAPIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhh--ccceEEecCcCCHHHHHHH
Confidence            445666889999999998  599999999999999999999998643 23334444443  2345789999999999999


Q ss_pred             HHHHHhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          101 ASEYNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      ++++.+++|++|++|||||+..      +..+.+.++|+++|++|+.+++.+++.++|+|++       +|+||++||..
T Consensus        79 ~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-------~g~Ii~iss~~  151 (258)
T PRK07533         79 FARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-------GGSLLTMSYYG  151 (258)
T ss_pred             HHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-------CCEEEEEeccc
Confidence            9999999999999999999752      3456789999999999999999999999999953       58999999987


Q ss_pred             ccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          175 HRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +..+.+.+          ..|+.||+++.+|++.++..
T Consensus       152 ~~~~~~~~----------~~Y~asKaal~~l~~~la~e  179 (258)
T PRK07533        152 AEKVVENY----------NLMGPVKAALESSVRYLAAE  179 (258)
T ss_pred             cccCCccc----------hhhHHHHHHHHHHHHHHHHH
Confidence            76654332          37999999999999988653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.6e-30  Score=209.04  Aligned_cols=169  Identities=12%  Similarity=0.055  Sum_probs=142.0

Q ss_pred             CCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        26 ~~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +.++++|+++||||+  +|||.++|++|+++|++|++++|+... ++..+++..+..+.++.++++|++|++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            356789999999997  899999999999999999999886432 23344444444345788999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          104 YNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      +.+.+|++|++|||||+..      +..+.+.++|.+.+++|+.+++.+++.++|+|.+       +|+||++||..+..
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~  153 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-------GGSIVTLTYLGGER  153 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-------CceEEEEcccCCcc
Confidence            9999999999999999752      3456788999999999999999999999999953       58999999998887


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.+++.          .|+.||+++.+|++.++..
T Consensus       154 ~~~~~~----------~Y~asKaal~~l~~~la~e  178 (257)
T PRK08594        154 VVQNYN----------VMGVAKASLEASVKYLAND  178 (257)
T ss_pred             CCCCCc----------hhHHHHHHHHHHHHHHHHH
Confidence            654433          7999999999999988753

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3e-30  Score=215.15  Aligned_cols=179  Identities=35%  Similarity=0.453  Sum_probs=153.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++....++.++.++++|++|.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988888888887776666889999999999999999999999


Q ss_pred             hcCCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc-
Q 027991          107 QHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR-  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-  184 (216)
                      .++++|+||||||+..+ ..+.+.++++.+|++|+.+++.+++.++|.|.++      .|+||++||..+..+...... 
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~------~~riv~vsS~~~~~~~~~~~~~  163 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG------RARVTSQSSIAARRGAINWDDL  163 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC------CCCeEEEechhhcCCCcCcccc
Confidence            99999999999998753 3356889999999999999999999999999863      689999999887765322211 


Q ss_pred             -CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 -FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 -~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                       +.....+...|+.||++..++++.+..
T Consensus       164 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~  191 (313)
T PRK05854        164 NWERSYAGMRAYSQSKIAVGLFALELDR  191 (313)
T ss_pred             cccccCcchhhhHHHHHHHHHHHHHHHH
Confidence             222334566899999999999998864

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.5e-30  Score=211.53  Aligned_cols=167  Identities=13%  Similarity=0.140  Sum_probs=139.7

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..+++|++|||||++  |||+++|++|+++|++|++++|+.+..+ ..+++..+. +. ..++++|++|+++++++++++
T Consensus         3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~~-g~-~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RVKPLAESL-GS-DFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HHHHHHHhc-CC-ceEEeCCCCCHHHHHHHHHHH
Confidence            447899999999996  9999999999999999999998754333 234443333 22 347899999999999999999


Q ss_pred             HhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      .+++|++|+||||||+..      +..+.+.++|++.+++|+.+++.++|.++|+|.+       +|+||++||.++..+
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-------~G~Iv~isS~~~~~~  152 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-------GGSMLTLTYGGSTRV  152 (271)
T ss_pred             HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-------CceEEEEcCCCcccc
Confidence            999999999999999853      3457889999999999999999999999999963       489999999988766


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .|++.          .|+.||+++.+|++.++...
T Consensus       153 ~~~~~----------~Y~asKaAl~~l~r~la~el  177 (271)
T PRK06505        153 MPNYN----------VMGVAKAALEASVRYLAADY  177 (271)
T ss_pred             CCccc----------hhhhhHHHHHHHHHHHHHHH
Confidence            54433          79999999999999987653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=3e-30  Score=208.66  Aligned_cols=169  Identities=24%  Similarity=0.247  Sum_probs=143.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++|+..  ++..+++...  +.++.++++|++++++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988642  3333444332  56788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||...  +..+.+.++|++++++|+.+++.+++.++|.|.++    +.+|+||++||..+..+.++.  
T Consensus        80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~~~--  153 (251)
T PRK12481         80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ----GNGGKIINIASMLSFQGGIRV--  153 (251)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc----CCCCEEEEeCChhhcCCCCCC--
Confidence            9999999999999863  45577899999999999999999999999999864    125899999999888765443  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              ..|+.||+++++|++.++...
T Consensus       154 --------~~Y~asK~a~~~l~~~la~e~  174 (251)
T PRK12481        154 --------PSYTASKSAVMGLTRALATEL  174 (251)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHH
Confidence                    379999999999999887643

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.8e-30  Score=210.21  Aligned_cols=163  Identities=14%  Similarity=0.089  Sum_probs=139.1

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|+++||||+  +|||.+++++|+++|++|++++|+. +.++..+++.    +.++.++++|++|+++++++++++.
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~   78 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIK   78 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHH
Confidence            4789999999999  7999999999999999999999983 3333333332    3457889999999999999999999


Q ss_pred             hhcCCccEEEECCccC------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          106 IQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      ++++++|+||||||+.      .+..+.+.++|+..+++|+.+++.+++.++|+|.+       +|+||++||.++..+.
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~~~  151 (252)
T PRK06079         79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-------GASIVTLTYFGSERAI  151 (252)
T ss_pred             HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-------CceEEEEeccCccccC
Confidence            9999999999999975      34557889999999999999999999999999963       5899999998887765


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +++          ..|+.||+++.+|++.++..
T Consensus       152 ~~~----------~~Y~asKaal~~l~~~la~e  174 (252)
T PRK06079        152 PNY----------NVMGIAKAALESSVRYLARD  174 (252)
T ss_pred             Ccc----------hhhHHHHHHHHHHHHHHHHH
Confidence            443          37999999999999998764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=216.13  Aligned_cols=169  Identities=27%  Similarity=0.268  Sum_probs=151.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999998888888777654  56788899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||+.  .+..+.+.+++++++++|+.+++.+++.++|+|.++     +.|+||++||..+..+.|..  
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-----~~g~iV~isS~~~~~~~p~~--  153 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-----GHGIFINMISLGGFAAQPYA--  153 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcChhhcCCCCCc--
Confidence            999999999999986  356678899999999999999999999999999976     57899999999888776543  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.||+++.+|++.++..
T Consensus       154 --------~~Y~asKaal~~~~~sL~~E  173 (330)
T PRK06139        154 --------AAYSASKFGLRGFSEALRGE  173 (330)
T ss_pred             --------hhHHHHHHHHHHHHHHHHHH
Confidence                    38999999999999998754

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.7e-30  Score=212.27  Aligned_cols=173  Identities=18%  Similarity=0.155  Sum_probs=142.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC----------cchHHHHHHHHhhcCCCeEEEEEccCCCHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI----------AAGKDVKETIVKEIPSAKVDAMELDLSSLA   95 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   95 (216)
                      +..+++|+++||||++|||+++|+.|+++|++|++++|+.          +++++..+++...  +.++.++++|+++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence            3457899999999999999999999999999999999974          3445555555432  456788999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEECC-ccC------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEE
Q 027991           96 SVRNFASEYNIQHHQLNILINNA-GIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII  168 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~A-g~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv  168 (216)
                      +++++++++.+.+|++|+||||| |..      .+..+.+.++|.+.+++|+.+++.++++++|.|.++     ++|+||
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-----~~g~IV  155 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-----PGGLVV  155 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-----CCcEEE
Confidence            99999999999999999999999 752      344567889999999999999999999999999865     468999


Q ss_pred             EEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          169 NVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       169 ~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++||..+.....+       ......|+.||+++.+|++.++..
T Consensus       156 ~isS~~~~~~~~~-------~~~~~~Y~asKaal~~lt~~La~e  192 (305)
T PRK08303        156 EITDGTAEYNATH-------YRLSVFYDLAKTSVNRLAFSLAHE  192 (305)
T ss_pred             EECCccccccCcC-------CCCcchhHHHHHHHHHHHHHHHHH
Confidence            9999766442111       112347999999999999988764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.97  E-value=3e-31  Score=204.18  Aligned_cols=167  Identities=25%  Similarity=0.257  Sum_probs=145.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++.||.+++|||.||||++++++|+.+|..+.+++.+.|. .+...++++.+|...+.+++||+++..+++++++++..+
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            5779999999999999999999999999988777777666 556778899999999999999999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      +|.+|++||+||+.      ++.+|+.++.+|++|.++-+..++|+|.|+  ..+.+|-|||+||++|..|.|-.+.|++
T Consensus        81 fg~iDIlINgAGi~------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~--~gG~GGiIvNmsSv~GL~P~p~~pVY~A  152 (261)
T KOG4169|consen   81 FGTIDILINGAGIL------DDKDWERTINVNLTGVINGTQLALPYMDKK--QGGKGGIIVNMSSVAGLDPMPVFPVYAA  152 (261)
T ss_pred             hCceEEEEcccccc------cchhHHHhhccchhhhhhhhhhhhhhhhhh--cCCCCcEEEEeccccccCccccchhhhh
Confidence            99999999999996      567799999999999999999999999986  5567899999999999999888885555


Q ss_pred             CCCCCccchHHHHHHH
Q 027991          188 INDPSGSFQSSALLLL  203 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~  203 (216)
                      .+++...|.+|-+-..
T Consensus       153 sKaGVvgFTRSla~~a  168 (261)
T KOG4169|consen  153 SKAGVVGFTRSLADLA  168 (261)
T ss_pred             cccceeeeehhhhhhh
Confidence            5555555555543333

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.5e-30  Score=209.49  Aligned_cols=169  Identities=21%  Similarity=0.268  Sum_probs=148.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++++|++|++++.++++++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887777777544  457888999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||+.  ++..+.+.++|++.+++|+.+++.+++.++|.|.++    +.+|+||++||.++..+.++.   
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~----~~~g~iv~isS~~~~~~~~~~---  153 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ----GTGGHVVFTASFAGLVPNAGL---  153 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCCCEEEEeCChhhccCCCCC---
Confidence            99999999999985  456678899999999999999999999999999864    126899999999888765443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++.+|++.++..
T Consensus       154 -------~~Y~asK~a~~~~~~~l~~e  173 (275)
T PRK05876        154 -------GAYGVAKYGVVGLAETLARE  173 (275)
T ss_pred             -------chHHHHHHHHHHHHHHHHHH
Confidence                   38999999999999888743

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.97  E-value=3.9e-30  Score=208.90  Aligned_cols=168  Identities=15%  Similarity=0.083  Sum_probs=141.6

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCc--chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        27 ~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .++++|+++||||+  +|||.++|++|+++|++|++++|+.+  +.++..+++...  ..+..++++|++|+++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHH
Confidence            34789999999986  89999999999999999999887654  234555555443  2346788999999999999999


Q ss_pred             HHHhhcCCccEEEECCccC------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          103 EYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      ++.+.++++|+||||||+.      .+..+.+.++|++.+++|+.+++.++|.++|.|.+       +|+||++||..+.
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-------~g~Iv~isS~~~~  152 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-------GGSIVTLTYLGGV  152 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-------CCeEEEEeccccc
Confidence            9999999999999999975      34557789999999999999999999999999963       4899999998887


Q ss_pred             ccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          177 LAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .+.|++.          .|+.||+++.+|++.++...
T Consensus       153 ~~~~~~~----------~Y~asKaal~~l~~~la~el  179 (258)
T PRK07370        153 RAIPNYN----------VMGVAKAALEASVRYLAAEL  179 (258)
T ss_pred             cCCcccc----------hhhHHHHHHHHHHHHHHHHh
Confidence            6654433          79999999999999987643

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=210.55  Aligned_cols=173  Identities=23%  Similarity=0.237  Sum_probs=147.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC---------cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI---------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVR   98 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   98 (216)
                      .+++|+++||||++|||.+++++|+++|++|++++++.         +.+++..+++...  +.++.++.+|++|++++.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence            46799999999999999999999999999999998875         5566666666543  456888999999999999


Q ss_pred             HHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCcEEEEEcCCcc
Q 027991           99 NFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGH  175 (216)
Q Consensus        99 ~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~isS~~~  175 (216)
                      ++++++.+.++++|++|||||+..  +..+.+.++|++++++|+.+++.+++.++|+|.++... ....|+||++||..+
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            999999999999999999999863  45678899999999999999999999999999864211 112479999999999


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+.++..          .|+.||+++.+|++.++..
T Consensus       161 ~~~~~~~~----------~Y~asKaal~~l~~~la~e  187 (286)
T PRK07791        161 LQGSVGQG----------NYSAAKAGIAALTLVAAAE  187 (286)
T ss_pred             CcCCCCch----------hhHHHHHHHHHHHHHHHHH
Confidence            88766543          8999999999999998753

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.2e-30  Score=206.45  Aligned_cols=168  Identities=27%  Similarity=0.299  Sum_probs=146.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++++++++++++++.++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999988888777777654  456889999999999999999999999


Q ss_pred             cCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc-ccccCCc
Q 027991          108 HHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEGI  183 (216)
Q Consensus       108 ~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~  183 (216)
                      ++++|++|||||..   .+..+.+.+++++++++|+.+++.+++.++|.|+++     +.|+||++||..+. .+.++  
T Consensus        81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-----~~~~iv~~sS~~~~~~~~~~--  153 (254)
T PRK07478         81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-----GGGSLIFTSTFVGHTAGFPG--  153 (254)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEechHhhccCCCC--
Confidence            99999999999985   344577889999999999999999999999999875     57899999998776 33333  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||+++.++++.++..
T Consensus       154 --------~~~Y~~sK~a~~~~~~~la~e  174 (254)
T PRK07478        154 --------MAAYAASKAGLIGLTQVLAAE  174 (254)
T ss_pred             --------cchhHHHHHHHHHHHHHHHHH
Confidence                    348999999999999988653

>PRK08589 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.2e-29  Score=207.57  Aligned_cols=167  Identities=27%  Similarity=0.328  Sum_probs=146.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|++|||||++|||.++++.|+++|++|++++|+ +.+++..+++...  +.++.++++|++++++++++++++.+.
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999 7777777777543  457889999999999999999999999


Q ss_pred             cCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|+||||||...   +..+.+.+.|++++++|+.+++.+++.++|+|.++      +|+||++||..+..+.+..  
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~--  151 (272)
T PRK08589         80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ------GGSIINTSSFSGQAADLYR--  151 (272)
T ss_pred             cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEeCchhhcCCCCCC--
Confidence            999999999999853   34567889999999999999999999999999874      5899999999887764443  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              ..|+.||+++++|++.++...
T Consensus       152 --------~~Y~asKaal~~l~~~la~e~  172 (272)
T PRK08589        152 --------SGYNAAKGAVINFTKSIAIEY  172 (272)
T ss_pred             --------chHHHHHHHHHHHHHHHHHHh
Confidence                    379999999999999987643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.1e-29  Score=206.55  Aligned_cols=167  Identities=14%  Similarity=0.110  Sum_probs=140.6

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..+++|+++||||++  |||+++|+.|+++|++|++++|+. ..++..+++..+. +. ..++++|++|+++++++++++
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHH
Confidence            346899999999997  999999999999999999999873 3445556665543 22 246789999999999999999


Q ss_pred             HhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      .+++|++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|.+       +|+||++||..+..+
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~  153 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-------GGSIVTLTYYGAEKV  153 (260)
T ss_pred             HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------CceEEEEecCccccC
Confidence            999999999999999752      4557789999999999999999999999999953       589999999888765


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .+++          ..|+.||+++.+|++.++...
T Consensus       154 ~~~~----------~~Y~asKaal~~l~~~la~el  178 (260)
T PRK06603        154 IPNY----------NVMGVAKAALEASVKYLANDM  178 (260)
T ss_pred             CCcc----------cchhhHHHHHHHHHHHHHHHh
Confidence            4443          379999999999999987643

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1e-29  Score=206.97  Aligned_cols=164  Identities=12%  Similarity=0.122  Sum_probs=138.4

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++|+++||||++  |||.++|+.|+++|++|++++|+ ++.++..+++..+.  .....+++|++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            7899999999986  99999999999999999999987 44555566665553  2356789999999999999999999


Q ss_pred             hcCCccEEEECCccCCC-------CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          107 QHHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~-------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +++++|++|||||+...       ..+.+.++|++.+++|+.+++.+++.+.|++.       ++|+||++||.++..+.
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~g~Iv~iss~~~~~~~  153 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-------PGSALLTLSYLGAERAI  153 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-------CCcEEEEEecCCCCCCC
Confidence            99999999999997521       23568899999999999999999999998764       25899999998876654


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.+.          .|+.||+++++|++.++..
T Consensus       154 ~~~~----------~Y~asKaal~~l~~~la~e  176 (262)
T PRK07984        154 PNYN----------VMGLAKASLEANVRYMANA  176 (262)
T ss_pred             CCcc----------hhHHHHHHHHHHHHHHHHH
Confidence            4433          8999999999999998764

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.97  E-value=1.7e-29  Score=205.78  Aligned_cols=173  Identities=29%  Similarity=0.278  Sum_probs=149.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ...+.+|+++|||+++|||+++|++|++.|++|++++|+.+..++...++..... +.++..+.||+++++++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999998888887766532 457999999999999999999998


Q ss_pred             Hhh-cCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhH-HHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          105 NIQ-HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLG-HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       105 ~~~-~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~-~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      .+. +|++|+||||||...   +..+.++++|++++++|+.| .+.+.+.+.++++++     ++|.|+++||..+..+.
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-----~gg~I~~~ss~~~~~~~  157 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-----KGGSIVNISSVAGVGPG  157 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-----CCceEEEEeccccccCC
Confidence            888 799999999999874   46789999999999999995 666778888888775     68999999999888763


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++.        + ..|+.||+++++|++.++..
T Consensus       158 ~~~--------~-~~Y~~sK~al~~ltr~lA~E  181 (270)
T KOG0725|consen  158 PGS--------G-VAYGVSKAALLQLTRSLAKE  181 (270)
T ss_pred             CCC--------c-ccchhHHHHHHHHHHHHHHH
Confidence            332        1 38999999999999988653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.2e-29  Score=206.43  Aligned_cols=166  Identities=12%  Similarity=0.062  Sum_probs=138.4

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~--s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|+. +.++..+++..+. + ....++||++|+++++++++++.
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL-D-SELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc-C-CceEEECCCCCHHHHHHHHHHHH
Confidence            378999999997  67999999999999999999998863 3444555555443 2 24578999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC-------CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          106 IQHHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~-------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++++++|++|||||+..+       ..+.+.++|+..+++|+.+++.++|.++|.|+++      +|+||++||.++..+
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~------~g~Iv~iss~~~~~~  153 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR------NSAIVALSYLGAVRA  153 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc------CcEEEEEcccccccC
Confidence            999999999999998632       1346778999999999999999999999999753      589999999988776


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .|++.          .|+.||+++.+|++.++..
T Consensus       154 ~~~~~----------~Y~asKaal~~l~~~la~e  177 (261)
T PRK08690        154 IPNYN----------VMGMAKASLEAGIRFTAAC  177 (261)
T ss_pred             CCCcc----------cchhHHHHHHHHHHHHHHH
Confidence            55443          7999999999999988653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=205.60  Aligned_cols=171  Identities=18%  Similarity=0.259  Sum_probs=145.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..++++|+++||||++|||.+++++|+++|++|++++| +.+.++...+++.... +.++.++++|++|+++++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999999999875 4455566666665433 457889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          105 NIQHHQLNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      .+.++++|++|||||+..        +..+.+.+++.+.+++|+.+++.+++.++|.|.++     +.|+||++||..+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~  156 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-----GGGSIISLSSTGNL  156 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-----CCEEEEEEeccccc
Confidence            999999999999998642        33466789999999999999999999999999865     56899999998877


Q ss_pred             ccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          177 LAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+.+++.          .|+.||+++++|++.++..
T Consensus       157 ~~~~~~~----------~Y~asK~a~~~~~~~la~e  182 (260)
T PRK08416        157 VYIENYA----------GHGTSKAAVETMVKYAATE  182 (260)
T ss_pred             cCCCCcc----------cchhhHHHHHHHHHHHHHH
Confidence            6655443          7999999999999998764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.2e-29  Score=209.87  Aligned_cols=186  Identities=49%  Similarity=0.659  Sum_probs=159.2

Q ss_pred             ccccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           20 AEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        20 ~~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      ........++++++++|||+++|||.++|++|+.+|++|++..|+.++.+++++++....+..++.++++|+++.+++++
T Consensus        24 ~~~~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~  103 (314)
T KOG1208|consen   24 ALEVTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRK  103 (314)
T ss_pred             cceeeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHH
Confidence            33445667889999999999999999999999999999999999999999999999987778899999999999999999


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +.+++....+++|++|||||+..+....+.+.++.+|.+|..|+|++++.++|.|+++     ..+|||++||..+ ...
T Consensus       104 fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-----~~~RIV~vsS~~~-~~~  177 (314)
T KOG1208|consen  104 FAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-----APSRIVNVSSILG-GGK  177 (314)
T ss_pred             HHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-----CCCCEEEEcCccc-cCc
Confidence            9999999999999999999999877788889999999999999999999999999987     4489999999887 111


Q ss_pred             cCC--ccCCCC--CCCCccchHHHHHHHHHHHHHHh
Q 027991          180 HEG--IRFDKI--NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       180 ~~~--~~~~~~--~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ...  ......  .....+|+.||.+...++..+..
T Consensus       178 ~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k  213 (314)
T KOG1208|consen  178 IDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAK  213 (314)
T ss_pred             cchhhccchhccCccchhHHHHhHHHHHHHHHHHHH
Confidence            111  111111  33344799999999988877754

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.5e-29  Score=205.74  Aligned_cols=165  Identities=15%  Similarity=0.130  Sum_probs=138.3

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|+. ...+..+++.++.+  ...++++|++|+++++++++++.
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHH
Confidence            4678999999997  8999999999999999999998863 23344455554442  24578999999999999999999


Q ss_pred             hhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          106 IQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      ++++++|++|||||+..      +..+.+.++|++.+++|+.+++.+++.++|+|.+       +|+||++||.++..+.
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~~~  156 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-------GGSILTLTYYGAEKVM  156 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CceEEEEeccccccCC
Confidence            99999999999999853      3457789999999999999999999999999853       5899999998776654


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |++          ..|+.||+++.+|++.++..
T Consensus       157 p~~----------~~Y~asKaal~~l~~~la~e  179 (272)
T PRK08159        157 PHY----------NVMGVAKAALEASVKYLAVD  179 (272)
T ss_pred             Ccc----------hhhhhHHHHHHHHHHHHHHH
Confidence            443          37999999999999998764

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-29  Score=207.79  Aligned_cols=168  Identities=23%  Similarity=0.255  Sum_probs=146.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++.++++|++|||||++|||.++++.|+++|++|++++|+.+++++..+++..   +.++..+++|++|+++++++++++
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999998877766665532   345777889999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|++|||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|.++      .|+||++||.++..+.++.
T Consensus        80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~  153 (296)
T PRK05872         80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER------RGYVLQVSSLAAFAAAPGM  153 (296)
T ss_pred             HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHhhcCCCCCc
Confidence            99999999999999985  456678999999999999999999999999999863      6899999999888775543


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                                ..|+.||+++++|++.+..
T Consensus       154 ----------~~Y~asKaal~~~~~~l~~  172 (296)
T PRK05872        154 ----------AAYCASKAGVEAFANALRL  172 (296)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHH
Confidence                      3899999999999998864

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-29  Score=202.40  Aligned_cols=172  Identities=23%  Similarity=0.300  Sum_probs=146.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++..+.+|++|+++++++++++.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988888777777654  45788899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||..  .+..+.+.++|++++++|+.+++.+++.++|.|.++    +.+|+||++||..+..+..+   
T Consensus        83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~---  155 (253)
T PRK05867         83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ----GQGGVIINTASMSGHIINVP---  155 (253)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc----CCCcEEEEECcHHhcCCCCC---
Confidence            999999999999985  345567899999999999999999999999999864    12579999999877643211   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           .....|+.||+++++|++.++..
T Consensus       156 -----~~~~~Y~asKaal~~~~~~la~e  178 (253)
T PRK05867        156 -----QQVSHYCASKAAVIHLTKAMAVE  178 (253)
T ss_pred             -----CCccchHHHHHHHHHHHHHHHHH
Confidence                 11247999999999999998753

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.4e-29  Score=192.05  Aligned_cols=160  Identities=34%  Similarity=0.439  Sum_probs=143.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC--CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRD--IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |+++||||++|||.+++++|+++|+ .|++++|+  .+..++..+++...  +.++.++++|++++++++++++++.+.+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            6899999999999999999999976 78888998  56677777777744  6889999999999999999999999999


Q ss_pred             CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|++|||||...  +..+.+.++++++|++|+.+++.+.+.++|   +      +.|+||++||..+..|.|+..   
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~------~~g~iv~~sS~~~~~~~~~~~---  146 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---Q------GGGKIVNISSIAGVRGSPGMS---  146 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---H------TTEEEEEEEEGGGTSSSTTBH---
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee---c------cccceEEecchhhccCCCCCh---
Confidence            99999999999974  445678899999999999999999999999   2      589999999999999877665   


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             .|+.+|+++.+|++.++..
T Consensus       147 -------~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  147 -------AYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHH
T ss_pred             -------hHHHHHHHHHHHHHHHHHh
Confidence                   9999999999999998753

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-29  Score=209.87  Aligned_cols=169  Identities=20%  Similarity=0.174  Sum_probs=150.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34578899999999999999999999999999999999988888777777654  5678899999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.+.. 
T Consensus        81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-----~~g~iV~isS~~~~~~~~~~-  154 (334)
T PRK07109         81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-----DRGAIIQVGSALAYRSIPLQ-  154 (334)
T ss_pred             HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEeCChhhccCCCcc-
Confidence            9999999999999975  456678999999999999999999999999999875     57899999999988765543 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                               ..|+.||+++.+|++.++.
T Consensus       155 ---------~~Y~asK~a~~~~~~~l~~  173 (334)
T PRK07109        155 ---------SAYCAAKHAIRGFTDSLRC  173 (334)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHH
Confidence                     3799999999999998864

>PRK06398 aldose dehydrogenase; Validated

Probab=99.97  E-value=4.7e-29  Score=202.47  Aligned_cols=157  Identities=25%  Similarity=0.267  Sum_probs=139.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+.             ..++.++++|++|+++++++++++.++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998643             125788999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||..  .+..+.+.++|++++++|+.+++.+++.++|+|.++     +.|+||++||..+..+.++.   
T Consensus        70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~---  141 (258)
T PRK06398         70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-----DKGVIINIASVQSFAVTRNA---  141 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEeCcchhccCCCCC---
Confidence            99999999999985  355678899999999999999999999999999875     57899999998887764443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||++++++++.++..
T Consensus       142 -------~~Y~~sKaal~~~~~~la~e  161 (258)
T PRK06398        142 -------AAYVTSKHAVLGLTRSIAVD  161 (258)
T ss_pred             -------chhhhhHHHHHHHHHHHHHH
Confidence                   38999999999999988653

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.8e-29  Score=200.92  Aligned_cols=172  Identities=23%  Similarity=0.238  Sum_probs=147.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.++++|+++||||++|||.+++++|+++|++|++++|+.+ .+++..+++...  +.++.++++|++|+++++++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999764 356666666544  456788999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|++|||||...  +..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~  155 (254)
T PRK06114         81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-----GGGSIVNIASMSGIIVNRGL  155 (254)
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----CCcEEEEECchhhcCCCCCC
Confidence            999999999999999863  45567899999999999999999999999999875     57899999999888765432


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ....|+.+|+++.++++.++..
T Consensus       156 --------~~~~Y~~sKaa~~~l~~~la~e  177 (254)
T PRK06114        156 --------LQAHYNASKAGVIHLSKSLAME  177 (254)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHH
Confidence                    1347999999999999998753

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-29  Score=207.90  Aligned_cols=182  Identities=43%  Similarity=0.586  Sum_probs=151.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++....++.++.++++|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999988877777777665555678899999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccCC--
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEG--  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~--  182 (216)
                      +.++++|+||||||...+..+.+.++++..+++|+.+++.+++.++|.|+++     +.++||++||..+.. +....  
T Consensus        91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~~~~~~~~~~  165 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-----PGSRVVTVSSGGHRIRAAIHFDD  165 (306)
T ss_pred             hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEECCHHHhccCCCCccc
Confidence            9999999999999987655566778899999999999999999999999875     468999999987654 21111  


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ........+...|+.||++++++++.++..
T Consensus       166 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~  195 (306)
T PRK06197        166 LQWERRYNRVAAYGQSKLANLLFTYELQRR  195 (306)
T ss_pred             cCcccCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            111122334568999999999999988653

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.3e-29  Score=197.60  Aligned_cols=166  Identities=20%  Similarity=0.167  Sum_probs=143.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++..+++|++++++++++++++.+.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777654  456788999999999999999999999


Q ss_pred             cC-CccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          108 HH-QLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       108 ~~-~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      ++ ++|++|||||..   .+..+.+.++|.+.+++|+.+++.+++.++|+|.++    +++|+||++||..+.   ++  
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~---~~--  150 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKR----NKKGVIVNVISHDDH---QD--  150 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCceEEEEecCCCC---CC--
Confidence            98 999999999854   345577889999999999999999999999999864    136899999996532   21  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||+++.+|++.++..
T Consensus       151 --------~~~Y~asKaal~~~~~~la~e  171 (227)
T PRK08862        151 --------LTGVESSNALVSGFTHSWAKE  171 (227)
T ss_pred             --------cchhHHHHHHHHHHHHHHHHH
Confidence                    237999999999999998764

>PLN02253 xanthoxin dehydrogenase

Probab=99.97  E-value=1.1e-28  Score=202.36  Aligned_cols=169  Identities=21%  Similarity=0.213  Sum_probs=145.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++.   .+.++.++++|++|+++++++++++.
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~   89 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTV   89 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998766655555442   13568899999999999999999999


Q ss_pred             hhcCCccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          106 IQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.++++|+||||||...    +..+.+.+++++++++|+.+++++++++++.|.++     .+|+||+++|..+..+.++
T Consensus        90 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~ii~isS~~~~~~~~~  164 (280)
T PLN02253         90 DKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-----KKGSIVSLCSVASAIGGLG  164 (280)
T ss_pred             HHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCceEEEecChhhcccCCC
Confidence            99999999999999853    24567899999999999999999999999999864     5789999999988776544


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..          .|+.||++++++++.++..
T Consensus       165 ~~----------~Y~~sK~a~~~~~~~la~e  185 (280)
T PLN02253        165 PH----------AYTGSKHAVLGLTRSVAAE  185 (280)
T ss_pred             Cc----------ccHHHHHHHHHHHHHHHHH
Confidence            32          7999999999999988654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=6.4e-29  Score=202.01  Aligned_cols=165  Identities=15%  Similarity=0.101  Sum_probs=135.3

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~--s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|... .++..+++..+.+.  ..++++|++|+++++++++++.
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS--DLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC--cceeeccCCCHHHHHHHHHHHH
Confidence            367899999996  679999999999999999999876522 23334444444322  2468999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC-------CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          106 IQHHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~-------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++++++|++|||||+..+       ..+.+.++|++.|++|+.+++.++|.++|+|.       ++|+||++||..+..+
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~-------~~g~Ii~iss~~~~~~  152 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS-------DDASLLTLSYLGAERV  152 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC-------CCceEEEEeccccccC
Confidence            999999999999998632       23567899999999999999999999999994       2589999999888765


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+++.          .|+.||+++.+|++.++..
T Consensus       153 ~~~~~----------~Y~asKaal~~l~~~la~e  176 (260)
T PRK06997        153 VPNYN----------TMGLAKASLEASVRYLAVS  176 (260)
T ss_pred             CCCcc----------hHHHHHHHHHHHHHHHHHH
Confidence            44432          7999999999999998764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-28  Score=198.96  Aligned_cols=169  Identities=21%  Similarity=0.240  Sum_probs=148.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988877777777654  45688899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||..  .+..+.+.++|++.+++|+.+++.+++.+++.|.++     +.|+||++||..+..+.++.  
T Consensus        83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~--  155 (254)
T PRK08085         83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-----QAGKIINICSMQSELGRDTI--  155 (254)
T ss_pred             hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEccchhccCCCCC--
Confidence            999999999999975  345677899999999999999999999999999865     56899999998877664433  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.+|++++++++.++..
T Consensus       156 --------~~Y~~sK~a~~~~~~~la~e  175 (254)
T PRK08085        156 --------TPYAASKGAVKMLTRGMCVE  175 (254)
T ss_pred             --------cchHHHHHHHHHHHHHHHHH
Confidence                    38999999999999998653

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=200.59  Aligned_cols=164  Identities=21%  Similarity=0.251  Sum_probs=142.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            3478899999999999999999999999999999999977666554443     45688999999999999999999999


Q ss_pred             hcCCccEEEECCccCC-CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          107 QHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      .++++|++|||||... ...+.+.++|++.+++|+.+++.+++.++|.|. +     +.|+||++||..+..+.++..  
T Consensus        77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-----~~g~ii~isS~~~~~~~~~~~--  148 (261)
T PRK08265         77 RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-----GGGAIVNFTSISAKFAQTGRW--  148 (261)
T ss_pred             HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-----CCcEEEEECchhhccCCCCCc--
Confidence            9999999999999853 233568899999999999999999999999997 3     478999999999888755433  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              .|+.+|+++.++++.++.
T Consensus       149 --------~Y~asKaa~~~~~~~la~  166 (261)
T PRK08265        149 --------LYPASKAAIRQLTRSMAM  166 (261)
T ss_pred             --------hhHHHHHHHHHHHHHHHH
Confidence                    799999999999998874

>PRK06194 hypothetical protein; Provisional

Probab=99.97  E-value=1.2e-28  Score=202.66  Aligned_cols=172  Identities=26%  Similarity=0.265  Sum_probs=146.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987777776666543  457888999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|++|||||...  +..+.+.++++..+++|+.+++.+++.++|.|.++.+. ....|+||++||.++..+.++.  
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--  158 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAM--  158 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC--
Confidence            999999999999864  34567889999999999999999999999999875211 0112799999999888765433  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              ..|+.||+++++|++.++.
T Consensus       159 --------~~Y~~sK~a~~~~~~~l~~  177 (287)
T PRK06194        159 --------GIYNVSKHAVVSLTETLYQ  177 (287)
T ss_pred             --------cchHHHHHHHHHHHHHHHH
Confidence                    3799999999999998865

>PRK09186 flagellin modification protein A; Provisional

Probab=99.97  E-value=1.3e-28  Score=198.99  Aligned_cols=179  Identities=22%  Similarity=0.212  Sum_probs=148.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|+++||||++|||.++++.|+++|++|++++|+.+++++..+++...++...+.++++|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999988888777777655545567788999999999999999999999


Q ss_pred             CCccEEEECCccC-----CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          109 HQLNILINNAGIM-----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       109 ~~id~li~~Ag~~-----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +++|++|||||..     .+..+.+.+++...+++|+.+++.+++.++|.|.++     +.|+||++||.++..+.....
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~  156 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-----GGGNLVNISSIYGVVAPKFEI  156 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----CCceEEEEechhhhccccchh
Confidence            9999999999854     244577889999999999999999999999999875     567999999988776432221


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+........|+.||++++++++.++..
T Consensus       157 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e  185 (256)
T PRK09186        157 YEGTSMTSPVEYAAIKAGIIHLTKYLAKY  185 (256)
T ss_pred             ccccccCCcchhHHHHHHHHHHHHHHHHH
Confidence            12222223347999999999999877663

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.97  E-value=5.9e-29  Score=205.79  Aligned_cols=170  Identities=17%  Similarity=0.173  Sum_probs=140.5

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhh-------cCCC----eEEEEEccC--
Q 027991           27 IDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-------IPSA----KVDAMELDL--   91 (216)
Q Consensus        27 ~~~~~k~~lItG~--s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-------~~~~----~~~~~~~Dv--   91 (216)
                      .+++||++|||||  ++|||.++|+.|+++|++|++ +|+.++++.....+...       .+..    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4588999999999  899999999999999999999 78888887777666431       1111    146788898  


Q ss_pred             CC------------------HHHHHHHHHHHHhhcCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHHH
Q 027991           92 SS------------------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNL  149 (216)
Q Consensus        92 ~~------------------~~~~~~~~~~~~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~  149 (216)
                      ++                  +++++++++++.+.+|++|+||||||..    .+..+.+.++|+++|++|+.+++.++|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            43                  3489999999999999999999999753    4567889999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       150 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      ++|.|.+       .|+||++||..+..+.|++.         ..|+.||+++.+|++.++...
T Consensus       164 ~~p~m~~-------~G~II~isS~a~~~~~p~~~---------~~Y~asKaAl~~l~~~la~El  211 (303)
T PLN02730        164 FGPIMNP-------GGASISLTYIASERIIPGYG---------GGMSSAKAALESDTRVLAFEA  211 (303)
T ss_pred             HHHHHhc-------CCEEEEEechhhcCCCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Confidence            9999974       48999999998877644321         269999999999999988653

>PRK09242 tropinone reductase; Provisional

Probab=99.97  E-value=1.9e-28  Score=198.41  Aligned_cols=171  Identities=25%  Similarity=0.311  Sum_probs=151.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+.+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++....++.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988888877777766666789999999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|++|||||..  .+..+.+.+++++.+++|+.+++.++++++|+|.++     +.|+||++||.++..+.++. 
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~sS~~~~~~~~~~-  157 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-----ASSAIVNIGSVSGLTHVRSG-  157 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCceEEEECccccCCCCCCC-
Confidence            9999999999999985  345577899999999999999999999999999875     56899999999888765443 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                               ..|+.+|++++.+++.++.
T Consensus       158 ---------~~Y~~sK~a~~~~~~~la~  176 (257)
T PRK09242        158 ---------APYGMTKAALLQMTRNLAV  176 (257)
T ss_pred             ---------cchHHHHHHHHHHHHHHHH
Confidence                     3799999999999998764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.97  E-value=1.5e-28  Score=201.28  Aligned_cols=171  Identities=23%  Similarity=0.250  Sum_probs=148.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ...++++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++++|+++++++.++++++
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence            344678999999999999999999999999999999999987777777766543  457889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC-----------------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEE
Q 027991          105 NIQHHQLNILINNAGIMG-----------------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRI  167 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~-----------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~i  167 (216)
                      .+.++++|++|||||...                 +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+|
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~i  156 (278)
T PRK08277         82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-----KGGNI  156 (278)
T ss_pred             HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEE
Confidence            999999999999999642                 23456789999999999999999999999999875     57899


Q ss_pred             EEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          168 INVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       168 v~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |++||..+..+.++.          ..|+.||+++++|++.++..
T Consensus       157 i~isS~~~~~~~~~~----------~~Y~~sK~a~~~l~~~la~e  191 (278)
T PRK08277        157 INISSMNAFTPLTKV----------PAYSAAKAAISNFTQWLAVH  191 (278)
T ss_pred             EEEccchhcCCCCCC----------chhHHHHHHHHHHHHHHHHH
Confidence            999999888765443          37999999999999988653

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-28  Score=198.77  Aligned_cols=173  Identities=23%  Similarity=0.262  Sum_probs=147.8

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .++..++++|++|||||++|||.++++.|+++|++|++++|+ +..++..+.+...  +.++.++++|+++.++++++++
T Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~   83 (258)
T PRK06935          7 SMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVK   83 (258)
T ss_pred             ccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHH
Confidence            344556889999999999999999999999999999999998 5555555555433  4568899999999999999999


Q ss_pred             HHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++.+.++++|++|||||...  +..+.+.++|++.+++|+.+++.+++.++|+|.++     +.|+||++||..+..+.+
T Consensus        84 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  158 (258)
T PRK06935         84 EALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-----GSGKIINIASMLSFQGGK  158 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-----CCeEEEEECCHHhccCCC
Confidence            99999999999999999863  45567889999999999999999999999999875     568999999998877654


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      ..          ..|+.+|++++++++.++...
T Consensus       159 ~~----------~~Y~asK~a~~~~~~~la~e~  181 (258)
T PRK06935        159 FV----------PAYTASKHGVAGLTKAFANEL  181 (258)
T ss_pred             Cc----------hhhHHHHHHHHHHHHHHHHHh
Confidence            43          389999999999999987643

>PRK05717 oxidoreductase; Validated

Probab=99.97  E-value=2e-28  Score=198.25  Aligned_cols=167  Identities=28%  Similarity=0.281  Sum_probs=142.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +...++||+++||||++|||.+++++|+++|++|++++|+.++.++..+++     +.++.++++|+++++++.++++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHH
Confidence            456688999999999999999999999999999999999876554433322     346889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          105 NIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      .++++++|++|||||...    +..+.+.++|++.+++|+.+++.+++++.|+|.+.      .|+||++||..+..+.+
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~ii~~sS~~~~~~~~  152 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH------NGAIVNLASTRARQSEP  152 (255)
T ss_pred             HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CcEEEEEcchhhcCCCC
Confidence            999999999999999863    33467889999999999999999999999999763      68999999998887655


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..          ..|+.+|++++++++.++..
T Consensus       153 ~~----------~~Y~~sKaa~~~~~~~la~~  174 (255)
T PRK05717        153 DT----------EAYAASKGGLLALTHALAIS  174 (255)
T ss_pred             CC----------cchHHHHHHHHHHHHHHHHH
Confidence            43          37999999999999988653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.97  E-value=2.1e-29  Score=189.78  Aligned_cols=181  Identities=24%  Similarity=0.226  Sum_probs=149.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++..|+++||||++|||+++++.|+..|++|++.+++.+.++++...+..   ..+...+.||+++.++++.++++..+.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999998877766655532   247888999999999999999999999


Q ss_pred             cCCccEEEECCccCCC--CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|.+++||||||+..+  ...+..++|++.+.+|++|.|.++|++.+.|....   ..+++|||+||..|.+|..+...|
T Consensus        88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~---~~~~sIiNvsSIVGkiGN~GQtnY  164 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ---QQGLSIINVSSIVGKIGNFGQTNY  164 (256)
T ss_pred             cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc---CCCceEEeehhhhcccccccchhh
Confidence            9999999999999853  45789999999999999999999999999966531   256699999999999999998877


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                      .+.+..+..|..+.+=..+-..+..|..|
T Consensus       165 AAsK~GvIgftktaArEla~knIrvN~Vl  193 (256)
T KOG1200|consen  165 AASKGGVIGFTKTAARELARKNIRVNVVL  193 (256)
T ss_pred             hhhcCceeeeeHHHHHHHhhcCceEeEec
Confidence            77777777666555544443333333333

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-28  Score=198.40  Aligned_cols=171  Identities=20%  Similarity=0.270  Sum_probs=150.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ...++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+.+...  +.++.++++|++|+++++++++++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   81 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQI   81 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            455788999999999999999999999999999999999988777777666543  457889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|++|||||...  +..+.+.+++.+++++|+.+++.+++.++|+|.++     +.|+||++||..+..+.++ 
T Consensus        82 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~-  155 (265)
T PRK07097         82 EKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-----GHGKIINICSMMSELGRET-  155 (265)
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCccccCCCCC-
Confidence            999999999999999863  45577899999999999999999999999999875     5789999999887776443 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ...|+.+|++++++++.++..
T Consensus       156 ---------~~~Y~~sKaal~~l~~~la~e  176 (265)
T PRK07097        156 ---------VSAYAAAKGGLKMLTKNIASE  176 (265)
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHH
Confidence                     348999999999999998754

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-28  Score=196.96  Aligned_cols=171  Identities=23%  Similarity=0.242  Sum_probs=148.6

Q ss_pred             CCCCCCEEEEeCCCC-chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATS-GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~-giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++|+++||||+| |||.++++.|+++|++|++++|+.+++++..+++...++..++.++++|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            446789999999985 9999999999999999999999988888877777665544578899999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|++|||||..  .+..+.+.++|.+.+++|+.+++.+++.++|.|.++     . .|+||+++|..+..+.++.
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~iv~~ss~~~~~~~~~~  167 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRAR-----GHGGVIVNNASVLGWRAQHGQ  167 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCcEEEEeCchhhcCCCCCC
Confidence            9999999999999975  345677889999999999999999999999999865     3 6899999998887664433


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.+|++++++++.++..
T Consensus       168 ----------~~Y~~sKaal~~~~~~la~e  187 (262)
T PRK07831        168 ----------AHYAAAKAGVMALTRCSALE  187 (262)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHH
Confidence                      37999999999999998753

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.2e-28  Score=196.49  Aligned_cols=170  Identities=25%  Similarity=0.354  Sum_probs=148.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.+.++...+++...  +.+..++++|+++.++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999988777777777544  45678899999999999999999999


Q ss_pred             hcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|++|||||..   .+..+.+.+++++.+++|+.+++.+++.++|+|.++     ..|+||++||..+..+.++. 
T Consensus        82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~-  155 (252)
T PRK07035         82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-----GGGSIVNVASVNGVSPGDFQ-  155 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCcEEEEECchhhcCCCCCC-
Confidence            999999999999964   345577889999999999999999999999999865     56899999998887765443 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               ..|+.||++++++++.++...
T Consensus       156 ---------~~Y~~sK~al~~~~~~l~~e~  176 (252)
T PRK07035        156 ---------GIYSITKAAVISMTKAFAKEC  176 (252)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHH
Confidence                     379999999999999987543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=3.2e-28  Score=196.91  Aligned_cols=169  Identities=25%  Similarity=0.306  Sum_probs=147.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||+++||.+++++|+++|++|++++|+.++.++..+.+...  +.++.++++|++|+++++++++++.
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   82 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFE   82 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988777766666543  4568899999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.+.+.|.++     +.|+||++||..+..+.++  
T Consensus        83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~~~~~--  155 (255)
T PRK07523         83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-----GAGKIINIASVQSALARPG--  155 (255)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----CCeEEEEEccchhccCCCC--
Confidence            9999999999999986  345567899999999999999999999999999875     5789999999877665443  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              ...|+.+|++++.+++.++.
T Consensus       156 --------~~~y~~sK~a~~~~~~~~a~  175 (255)
T PRK07523        156 --------IAPYTATKGAVGNLTKGMAT  175 (255)
T ss_pred             --------CccHHHHHHHHHHHHHHHHH
Confidence                    33799999999999998864

>PRK06128 oxidoreductase; Provisional

Probab=99.96  E-value=5.3e-28  Score=200.43  Aligned_cols=166  Identities=23%  Similarity=0.234  Sum_probs=141.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc--chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|++|||||++|||.++++.|+++|++|++++++.+  ..++..+.+...  +.++.++.+|+++.++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            478899999999999999999999999999999887643  234445555443  5578899999999999999999999


Q ss_pred             hhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|+||||||..   .+..+.+.++|++++++|+.+++.+++.++|.|.+       +++||++||..+..+.++.
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~  202 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-------GASIINTGSIQSYQPSPTL  202 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-------CCEEEEECCccccCCCCCc
Confidence            9999999999999975   34557789999999999999999999999999863       5799999999887765443


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       203 ----------~~Y~asK~a~~~~~~~la~e  222 (300)
T PRK06128        203 ----------LDYASTKAAIVAFTKALAKQ  222 (300)
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHH
Confidence                      37999999999999998754

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.2e-28  Score=198.84  Aligned_cols=164  Identities=26%  Similarity=0.309  Sum_probs=143.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++++++||||++|||.+++++|+++|++|++++|+.+++++..+++.      ++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998777665544432      4678999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||+.  .+..+.+.+++++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.   
T Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~---  147 (273)
T PRK07825         76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-----GRGHVVNVASLAGKIPVPGM---  147 (273)
T ss_pred             cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEEcCccccCCCCCC---
Confidence            99999999999986  345567889999999999999999999999999876     67899999999988875544   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++.++++.+...
T Consensus       148 -------~~Y~asKaa~~~~~~~l~~e  167 (273)
T PRK07825        148 -------ATYCASKHAVVGFTDAARLE  167 (273)
T ss_pred             -------cchHHHHHHHHHHHHHHHHH
Confidence                   37999999999999888654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.96  E-value=4.8e-28  Score=195.89  Aligned_cols=168  Identities=20%  Similarity=0.223  Sum_probs=142.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++++..  ++..+.+...  +.++.++++|++|+++++++++++.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999998877542  3444455432  45788999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +++++|++|||||+.  .+..+.+.++|++.+++|+.+++.++++++|.|.++    +.+|+||++||..+..+.+..  
T Consensus        82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~~~--  155 (253)
T PRK08993         82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ----GNGGKIINIASMLSFQGGIRV--  155 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC----CCCeEEEEECchhhccCCCCC--
Confidence            999999999999986  345577889999999999999999999999999864    125899999999887764433  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.+|++++++++.++..
T Consensus       156 --------~~Y~~sKaa~~~~~~~la~e  175 (253)
T PRK08993        156 --------PSYTASKSGVMGVTRLMANE  175 (253)
T ss_pred             --------cchHHHHHHHHHHHHHHHHH
Confidence                    38999999999999988764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=6e-28  Score=200.72  Aligned_cols=175  Identities=29%  Similarity=0.281  Sum_probs=146.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +..++++|+++||||++|||.+++++|+++|++|++.+++. +..++..+++...  +.++.++++|++|++++++++++
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHH
Confidence            34668999999999999999999999999999999998754 4456666666553  56788999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccC--CCCcEEEEEcCCcccccc
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKS--GGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~  179 (216)
                      +.+ ++++|++|||||+..  +..+.+.++|+.++++|+.+++.+++.++++|+++....  ...|+||++||..+..+.
T Consensus        84 ~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (306)
T PRK07792         84 AVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP  162 (306)
T ss_pred             HHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC
Confidence            988 999999999999864  345678999999999999999999999999997642111  124899999999888765


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++..          .|+.+|+++++|++.++..
T Consensus       163 ~~~~----------~Y~asKaal~~l~~~la~e  185 (306)
T PRK07792        163 VGQA----------NYGAAKAGITALTLSAARA  185 (306)
T ss_pred             CCCc----------hHHHHHHHHHHHHHHHHHH
Confidence            4433          7999999999999988754

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2.1e-28  Score=198.54  Aligned_cols=165  Identities=19%  Similarity=0.179  Sum_probs=133.5

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~--s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .++++|+++||||  ++|||.+++++|+++|++|++++|+..  ++..+++..+. +.++.++++|++|+++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~--~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA--LRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc--hhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHH
Confidence            4478999999999  899999999999999999999998641  12222333333 235678999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      .+.++++|++|||||+..      +..+.+.++|++++++|+.+++.+++.++|.|++       +|+||++++.. ..+
T Consensus        80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-------~g~Iv~is~~~-~~~  151 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-------GGSIVGLDFDA-TVA  151 (256)
T ss_pred             HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-------CceEEEEeecc-ccc
Confidence            999999999999999862      3446688999999999999999999999999973       57999998642 222


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+.          ...|+.||+++.+|++.++..
T Consensus       152 ~~~----------~~~Y~asKaal~~l~~~la~e  175 (256)
T PRK07889        152 WPA----------YDWMGVAKAALESTNRYLARD  175 (256)
T ss_pred             CCc----------cchhHHHHHHHHHHHHHHHHH
Confidence            221          236899999999999998764

>PRK07985 oxidoreductase; Provisional

Probab=99.96  E-value=6.2e-28  Score=199.56  Aligned_cols=168  Identities=24%  Similarity=0.184  Sum_probs=141.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC--cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.  +..++..+.+...  +.++.++.+|++|++++.++++++
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHH
Confidence            458899999999999999999999999999999988754  2334444333322  456888999999999999999999


Q ss_pred             HhhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          105 NIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      .+.++++|++|||||..   .+..+.+.++|++++++|+.+++.++++++|.|.+       .|+||++||..+..+.++
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~iSS~~~~~~~~~  195 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-------GASIITTSSIQAYQPSPH  195 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-------CCEEEEECCchhccCCCC
Confidence            99999999999999974   34557789999999999999999999999999963       479999999988776544


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .          ..|+.||++++++++.++...
T Consensus       196 ~----------~~Y~asKaal~~l~~~la~el  217 (294)
T PRK07985        196 L----------LDYAATKAAILNYSRGLAKQV  217 (294)
T ss_pred             c----------chhHHHHHHHHHHHHHHHHHH
Confidence            3          379999999999999987643

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-28  Score=195.69  Aligned_cols=169  Identities=25%  Similarity=0.249  Sum_probs=148.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++.+++.++++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777777766544  45788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|++|||||...   +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.++. 
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~sS~~~~~~~~~~-  154 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-----GGGAIVNTASVAGLGAAPKM-  154 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhccCCCCC-
Confidence            9999999999999853   34567899999999999999999999999999865     56899999999888765543 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.+|++++++++.++..
T Consensus       155 ---------~~Y~~sKaa~~~~~~~la~e  174 (253)
T PRK06172        155 ---------SIYAASKHAVIGLTKSAAIE  174 (253)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHH
Confidence                     37999999999999998754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-28  Score=198.53  Aligned_cols=165  Identities=21%  Similarity=0.229  Sum_probs=140.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.++++...+++     +.++.++++|++|+++++++++++.+.
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999977665544433     346788999999999999999999999


Q ss_pred             cCCccEEEECCccCC---CCCCCChHH----HHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          108 HHQLNILINNAGIMG---TPFMLSKDN----IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       108 ~~~id~li~~Ag~~~---~~~~~~~~~----~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++++|++|||||+..   +..+.+.++    |++++++|+.+++.+++.++|.|.++      +|+||++||..+..+.+
T Consensus        78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~~  151 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS------GGSMIFTLSNSSFYPGG  151 (263)
T ss_pred             cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc------CCEEEEECChhhcCCCC
Confidence            999999999999752   334555554    88999999999999999999998763      68999999998877644


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      +.          ..|+.||+++++|++.++...
T Consensus       152 ~~----------~~Y~~sK~a~~~~~~~la~el  174 (263)
T PRK06200        152 GG----------PLYTASKHAVVGLVRQLAYEL  174 (263)
T ss_pred             CC----------chhHHHHHHHHHHHHHHHHHH
Confidence            43          379999999999999987643

>PRK05599 hypothetical protein; Provisional

Probab=99.96  E-value=3.1e-28  Score=196.42  Aligned_cols=165  Identities=17%  Similarity=0.196  Sum_probs=141.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++++||||++|||.+++++|+ +|++|++++|+.+++++..+++.... ...+.++++|++|+++++++++++.+.++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            469999999999999999999 69999999999988888888876542 3457889999999999999999999999999


Q ss_pred             cEEEECCccCCC--CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |++|||||+..+  ..+.+.+++.+++++|+.+++.+++.++|.|.++    ..+|+||++||.++..+.++.       
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~~~~~~~-------  147 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ----TAPAAIVAFSSIAGWRARRAN-------  147 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc----CCCCEEEEEeccccccCCcCC-------
Confidence            999999998643  3355677788899999999999999999999864    125899999999988765543       


Q ss_pred             CCCccchHHHHHHHHHHHHHHhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ..|+.||+++.+|++.++..
T Consensus       148 ---~~Y~asKaa~~~~~~~la~e  167 (246)
T PRK05599        148 ---YVYGSTKAGLDAFCQGLADS  167 (246)
T ss_pred             ---cchhhHHHHHHHHHHHHHHH
Confidence               38999999999999998764

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.1e-28  Score=195.50  Aligned_cols=166  Identities=20%  Similarity=0.173  Sum_probs=143.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|+++||||++|||.++++.|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999987777766666543  357889999999999999999999999999


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||||..  .+..+.+.++|++++++|+.++++++++++|.|.++    ..+|+||++||.++..+.++.      
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~~~------  148 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEK----GIKGNIINMVATYAWDAGPGV------  148 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc----CCCEEEEEEcChhhccCCCCC------
Confidence            99999999964  345578899999999999999999999999998753    135899999999887654433      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ..|+.||+++++|++.++..
T Consensus       149 ----~~Y~~sKaa~~~~~~~la~e  168 (252)
T PRK07677        149 ----IHSAAAKAGVLAMTRTLAVE  168 (252)
T ss_pred             ----cchHHHHHHHHHHHHHHHHH
Confidence                37999999999999987654

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.5e-28  Score=196.99  Aligned_cols=171  Identities=20%  Similarity=0.176  Sum_probs=142.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-------hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      ..+++|+++||||++|||.++++.|+++|++|++++|+.+.       +++..+++...  +.++.++++|+++++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHH
Confidence            34678999999999999999999999999999999998653       33444444433  4578899999999999999


Q ss_pred             HHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          100 FASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      +++++.+.++++|++|||||..  .+..+.+.+++++++++|+.+++.++++++|.|.++     .+|+||++||..+..
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~  154 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-----ENPHILTLSPPLNLD  154 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-----CCCEEEEECCchhcc
Confidence            9999999999999999999985  345577889999999999999999999999999875     568999999976654


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.        .......|+.||++++++++.++..
T Consensus       155 ~~--------~~~~~~~Y~~sK~a~~~~~~~la~e  181 (273)
T PRK08278        155 PK--------WFAPHTAYTMAKYGMSLCTLGLAEE  181 (273)
T ss_pred             cc--------ccCCcchhHHHHHHHHHHHHHHHHH
Confidence            42        0123448999999999999988754

>PRK06196 oxidoreductase; Provisional

Probab=99.96  E-value=4.7e-28  Score=202.07  Aligned_cols=182  Identities=41%  Similarity=0.504  Sum_probs=147.0

Q ss_pred             ccccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           20 AEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        20 ~~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      ...+.+..++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.      .+.++++|++|.+++++
T Consensus        15 ~~~~~~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~   88 (315)
T PRK06196         15 AEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRA   88 (315)
T ss_pred             HHHHhcCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHH
Confidence            333444567889999999999999999999999999999999999877666555442      26789999999999999


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +++++.+.++++|+||||||+..+..+.+.++|+..+++|+.+++.+++.++|.|.++     +.++||++||..+..+.
T Consensus        89 ~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~~~~  163 (315)
T PRK06196         89 FAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-----AGARVVALSSAGHRRSP  163 (315)
T ss_pred             HHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCeEEEECCHHhccCC
Confidence            9999999899999999999987555556778899999999999999999999999875     45899999997654332


Q ss_pred             cCC--ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEG--IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~--~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ...  ..+.....+...|+.||++.+++++.+...
T Consensus       164 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~  198 (315)
T PRK06196        164 IRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKL  198 (315)
T ss_pred             CCccccCccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence            111  111122334558999999999999888653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.96  E-value=3.1e-28  Score=203.55  Aligned_cols=167  Identities=23%  Similarity=0.281  Sum_probs=137.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ..|++++||||++|||.++|++|+++|++|++++|+.+++++..+++...+++.++.++.+|+++  ++.+.++++.+..
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            45899999999999999999999999999999999999999888888877666688899999995  2223333333333


Q ss_pred             C--CccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-c-cc
Q 027991          109 H--QLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-A-YH  180 (216)
Q Consensus       109 ~--~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~-~~  180 (216)
                      +  .+|++|||||+..    +..+.+.+++++++++|+.+++.+++.++|.|.++     +.|+||++||.++.. + .|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~g~IV~iSS~a~~~~~~~p  203 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIINIGSGAAIVIPSDP  203 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccCCCCc
Confidence            3  4669999999863    34577899999999999999999999999999876     679999999988864 2 22


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ...|+.||+++.++++.++..
T Consensus       204 ~----------~~~Y~aSKaal~~~~~~L~~E  225 (320)
T PLN02780        204 L----------YAVYAATKAYIDQFSRCLYVE  225 (320)
T ss_pred             c----------chHHHHHHHHHHHHHHHHHHH
Confidence            2          348999999999999998754

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-27  Score=197.61  Aligned_cols=172  Identities=26%  Similarity=0.273  Sum_probs=144.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +...+.+|+++||||+||||.++++.|+++|++|++++|+.+.+++..+++...  +.++.++++|++|++++.++++++
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            456688999999999999999999999999999999999988877777776543  456789999999999999999999


Q ss_pred             HhhcCCccEEEECCccCCC--CCCC--ChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          105 NIQHHQLNILINNAGIMGT--PFML--SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~--~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      .+.++++|++|||||....  ..+.  +.++++..+++|+.+++.+++.++|.|.++     +.|+||++||.++..+. 
T Consensus       112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~-  185 (293)
T PRK05866        112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-----GDGHIINVATWGVLSEA-  185 (293)
T ss_pred             HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcEEEEECChhhcCCC-
Confidence            9999999999999998632  2222  457888999999999999999999999875     57899999996554321 


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ......|+.||+++.+|++.++..
T Consensus       186 --------~p~~~~Y~asKaal~~l~~~la~e  209 (293)
T PRK05866        186 --------SPLFSVYNASKAALSAVSRVIETE  209 (293)
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHH
Confidence                    112348999999999999988653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.2e-27  Score=193.96  Aligned_cols=168  Identities=23%  Similarity=0.272  Sum_probs=141.1

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCC-----------cchHHHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDI-----------AAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        28 ~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      .+++|+++||||+  +|||.++|++|+++|++|++++++.           +...+..+++...  +.++.++++|++++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            5889999999999  4999999999999999999986431           1122333334332  56788999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      ++++++++++.+.++++|++|||||..  .+..+.+.++|++.+++|+.+++.+++.++|.|.++     ..|+||++||
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS  155 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-----SGGRIINMTS  155 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-----CCeEEEEEcc
Confidence            999999999999999999999999975  345678999999999999999999999999999875     5789999999


Q ss_pred             CcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          173 EGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+..+.+++          ..|+.||+++.+|++.++..
T Consensus       156 ~~~~~~~~~~----------~~Y~~sK~a~~~l~~~la~~  185 (256)
T PRK12859        156 GQFQGPMVGE----------LAYAATKGAIDALTSSLAAE  185 (256)
T ss_pred             cccCCCCCCc----------hHHHHHHHHHHHHHHHHHHH
Confidence            9887665543          38999999999999988754

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-27  Score=194.28  Aligned_cols=168  Identities=16%  Similarity=0.186  Sum_probs=144.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +.++++|+++||||++|||.+++++|+++|++|++++|+.+..+...+++...  +.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIA   81 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999987766666666543  3467889999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|++|||||..  .+..+.+.+++.+.+++|+.+++.++++++|.|.++      +|+||++||..+..+.++. 
T Consensus        82 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~------~g~iv~iss~~~~~~~~~~-  154 (264)
T PRK07576         82 DEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP------GASIIQISAPQAFVPMPMQ-  154 (264)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCEEEEECChhhccCCCCc-
Confidence            9999999999999864  345577889999999999999999999999999763      5899999998877654433 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                               ..|+.+|++++.|++.++.
T Consensus       155 ---------~~Y~asK~a~~~l~~~la~  173 (264)
T PRK07576        155 ---------AHVCAAKAGVDMLTRTLAL  173 (264)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHH
Confidence                     3899999999999998864

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-27  Score=193.07  Aligned_cols=166  Identities=23%  Similarity=0.223  Sum_probs=140.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.. .++..+++...  +.++.++++|+++++++.++++++.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            3477899999999999999999999999999999999853 34445555433  45688899999999999999999999


Q ss_pred             hcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|++|||||..   .+..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..  +   
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~--~---  150 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-----GGGAIVNVSSIATRG--I---  150 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEEcCccccC--C---
Confidence            999999999999963   456678899999999999999999999999999875     568999999976531  1   


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ....|+.||+++++|++.++..
T Consensus       151 -------~~~~Y~~sK~a~~~~~~~la~e  172 (260)
T PRK12823        151 -------NRVPYSAAKGGVNALTASLAFE  172 (260)
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHH
Confidence                   1237999999999999988753

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-27  Score=193.06  Aligned_cols=165  Identities=24%  Similarity=0.277  Sum_probs=138.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE-cCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++|+++||||++|||.+++++|+++|++|++.+ ++.+..++...++...  +.+...+++|+++.+++.++++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999875 5556666666666543  456778999999999999999887653


Q ss_pred             ----cC--CccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          108 ----HH--QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       108 ----~~--~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                          ++  ++|+||||||..  .+..+.+.++|++++++|+.+++.++++++|.|.+       .|+||++||..+..+.
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~  152 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRISL  152 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------CCeEEEECCcccccCC
Confidence                34  899999999975  24557788999999999999999999999999974       4899999999888765


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++.          ..|+.||++++++++.++..
T Consensus       153 ~~~----------~~Y~~sKaa~~~~~~~la~e  175 (252)
T PRK12747        153 PDF----------IAYSMTKGAINTMTFTLAKQ  175 (252)
T ss_pred             CCc----------hhHHHHHHHHHHHHHHHHHH
Confidence            543          38999999999999988653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-27  Score=192.64  Aligned_cols=170  Identities=26%  Similarity=0.365  Sum_probs=149.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++..+++|+++||||+++||.+++++|+++|++|++++|+.+.++...+++...  +.++.++.+|+++++++.++++++
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   82 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARI   82 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence            355688999999999999999999999999999999999987777777766543  456889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|++|||+|...  +..+.+.++|++.+++|+.+++.+++.+++.|.++     +.|+||++||..+..+.++.
T Consensus        83 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~~~  157 (256)
T PRK06124         83 DAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-----GYGRIIAITSIAGQVARAGD  157 (256)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEeechhccCCCCc
Confidence            999999999999999863  45577889999999999999999999999999875     57899999999888776554


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                                ..|+.+|+++.++++.++.
T Consensus       158 ----------~~Y~~sK~a~~~~~~~la~  176 (256)
T PRK06124        158 ----------AVYPAAKQGLTGLMRALAA  176 (256)
T ss_pred             ----------cHhHHHHHHHHHHHHHHHH
Confidence                      3899999999999988764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.96  E-value=5.2e-28  Score=196.57  Aligned_cols=164  Identities=20%  Similarity=0.248  Sum_probs=137.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..    ... +.++.++++|+++++++.++++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE----AAH-GDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hhc-CCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999876554433    222 346888999999999999999999999


Q ss_pred             cCCccEEEECCccCC---CCCCCCh----HHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          108 HHQLNILINNAGIMG---TPFMLSK----DNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       108 ~~~id~li~~Ag~~~---~~~~~~~----~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++++|++|||||+..   +..+.+.    ++|++++++|+.+++.++++++|.|.++      +|+||+++|..+..+.+
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~~sS~~~~~~~~  150 (262)
T TIGR03325        77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS------RGSVIFTISNAGFYPNG  150 (262)
T ss_pred             hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc------CCCEEEEeccceecCCC
Confidence            999999999999742   2333332    5789999999999999999999999863      57899999988876544


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       151 ~~----------~~Y~~sKaa~~~l~~~la~e  172 (262)
T TIGR03325       151 GG----------PLYTAAKHAVVGLVKELAFE  172 (262)
T ss_pred             CC----------chhHHHHHHHHHHHHHHHHh
Confidence            33          37999999999999988764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.96  E-value=2.8e-27  Score=191.75  Aligned_cols=166  Identities=20%  Similarity=0.249  Sum_probs=144.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||+++||.++++.|+++|++|++++|+.+..+...+++....+..++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998877777777665543357899999999999999999999999999


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCccCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      +|++|||||...  +..+.+.++|++.+++|+.+++++++.+++.|.++     + .|+||++||..+..+.+.      
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~~iv~~ss~~~~~~~~~------  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRD-----GIQGRIIQINSKSGKVGSKH------  150 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhC-----CCCcEEEEecCcccccCCCC------
Confidence            999999999763  34577889999999999999999999999999864     3 579999999887765433      


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          ...|+.||++++++++.++.
T Consensus       151 ----~~~Y~~sKaa~~~l~~~la~  170 (259)
T PRK12384        151 ----NSGYSAAKFGGVGLTQSLAL  170 (259)
T ss_pred             ----CchhHHHHHHHHHHHHHHHH
Confidence                34799999999999998864

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.8e-27  Score=191.40  Aligned_cols=166  Identities=20%  Similarity=0.175  Sum_probs=144.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987777766666543  457889999999999999999999999


Q ss_pred             cCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|++|||||...   +..+.+.+++++++++|+.+++.+++.+.+.|.++      +|+||++||..+..+.++.  
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~~~~~~--  151 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES------GGSIVMINSMVLRHSQPKY--  151 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCEEEEEechhhccCCCCc--
Confidence            999999999999753   34467889999999999999999999999999864      5799999998887665443  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              ..|+.+|++..++++.++.
T Consensus       152 --------~~Y~~sK~a~~~l~~~~a~  170 (258)
T PRK07890        152 --------GAYKMAKGALLAASQSLAT  170 (258)
T ss_pred             --------chhHHHHHHHHHHHHHHHH
Confidence                    3799999999999998874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.96  E-value=3.8e-27  Score=190.74  Aligned_cols=168  Identities=27%  Similarity=0.329  Sum_probs=145.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++++++.++++.+.+.
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999988777777766543  456888999999999999999999999


Q ss_pred             cCCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          108 HHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      ++++|++|||||...+ ..+.+.+++++.+++|+.+++.+++.++|.|.+.     +.|+||++||.++..+.++.    
T Consensus        86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~----  156 (255)
T PRK06113         86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAENKNINM----  156 (255)
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----CCcEEEEEecccccCCCCCc----
Confidence            9999999999997532 2367889999999999999999999999999764     46799999999887764433    


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ..|+.+|++++++++.++..
T Consensus       157 ------~~Y~~sK~a~~~~~~~la~~  176 (255)
T PRK06113        157 ------TSYASSKAAASHLVRNMAFD  176 (255)
T ss_pred             ------chhHHHHHHHHHHHHHHHHH
Confidence                  37999999999999998653

>PRK08643 acetoin reductase; Validated

Probab=99.96  E-value=3.4e-27  Score=190.92  Aligned_cols=165  Identities=22%  Similarity=0.258  Sum_probs=143.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|+++||||++|||.++++.|+++|++|++++|+.+..+....++...  +.++.++++|++++++++++++++.+.+++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999987777776666543  457888999999999999999999999999


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||||+.  .+..+.+.+++++.+++|+.+++.+++.+++.|++.    +..|+||++||..+..+.++.      
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~~~------  149 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKL----GHGGKIINATSQAGVVGNPEL------  149 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCCEEEEECccccccCCCCC------
Confidence            99999999975  345567889999999999999999999999999764    135799999999888765543      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          ..|+.+|++++++++.++.
T Consensus       150 ----~~Y~~sK~a~~~~~~~la~  168 (256)
T PRK08643        150 ----AVYSSTKFAVRGLTQTAAR  168 (256)
T ss_pred             ----chhHHHHHHHHHHHHHHHH
Confidence                3799999999999998875

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=1.7e-27  Score=210.96  Aligned_cols=163  Identities=23%  Similarity=0.286  Sum_probs=143.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ...+|++|||||++|||.++|++|+++|++|++++|+.+++++..+++     +.+..++.+|++|+++++++++++.+.
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999977766655443     345678999999999999999999999


Q ss_pred             cCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|+||||||..   .+..+.+.++|++++++|+.+++.+++.++|+|.       +.|+||++||.++..+.++.. 
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~g~iv~isS~~~~~~~~~~~-  412 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS-------QGGVIVNLGSIASLLALPPRN-  412 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc-------cCCEEEEECchhhcCCCCCCc-
Confidence            99999999999985   3455778999999999999999999999999993       468999999999988765543 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+.||+++++|++.++..
T Consensus       413 ---------~Y~asKaal~~l~~~la~e  431 (520)
T PRK06484        413 ---------AYCASKAAVTMLSRSLACE  431 (520)
T ss_pred             ---------hhHHHHHHHHHHHHHHHHH
Confidence                     8999999999999998754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-27  Score=193.19  Aligned_cols=161  Identities=25%  Similarity=0.287  Sum_probs=139.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|+++||||++|||.+++++|+++|++|++++++.+..+           ..++.++++|++|+++++++++++.
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999876532           2357789999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC-----------CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          106 IQHHQLNILINNAGIMGT-----------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~-----------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      +.++++|++|||||...+           ..+.+.++|++++++|+.+++.+++++.++|.++     +.|+||++||..
T Consensus        73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~  147 (266)
T PRK06171         73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-----HDGVIVNMSSEA  147 (266)
T ss_pred             HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-----CCcEEEEEcccc
Confidence            999999999999997522           1356889999999999999999999999999875     568999999998


Q ss_pred             ccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          175 HRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +..+.++.          ..|+.+|+++++|++.++..
T Consensus       148 ~~~~~~~~----------~~Y~~sK~a~~~l~~~la~e  175 (266)
T PRK06171        148 GLEGSEGQ----------SCYAATKAALNSFTRSWAKE  175 (266)
T ss_pred             ccCCCCCC----------chhHHHHHHHHHHHHHHHHH
Confidence            88765443          38999999999999988653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.96  E-value=3.2e-27  Score=197.57  Aligned_cols=180  Identities=31%  Similarity=0.459  Sum_probs=144.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++.+|+++||||++|||.++++.|+++|++|++++|+.++.++..+++..  ++.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI--PPDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998887777776642  245788999999999999999999887


Q ss_pred             hcCCccEEEECCccCCC---CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc----
Q 027991          107 QHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY----  179 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  179 (216)
                      .++++|+||||||+..+   ..+.+.++++.++++|+.+++.+++.++|.|+++.   ...++||++||.....+.    
T Consensus        80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~~~~riV~vsS~~~~~~~~~~~  156 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSP---APDPRLVILGTVTANPKELGGK  156 (322)
T ss_pred             hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC---CCCceEEEEcccccCccccCCc
Confidence            77899999999998643   23568899999999999999999999999998751   113699999997654321    


Q ss_pred             ---cCCccC------------------CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          180 ---HEGIRF------------------DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       180 ---~~~~~~------------------~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                         +....+                  .....+...|+.||++..++++.+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  209 (322)
T PRK07453        157 IPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHR  209 (322)
T ss_pred             cCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHH
Confidence               111011                  12234566899999999988887765

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.2e-27  Score=192.14  Aligned_cols=164  Identities=20%  Similarity=0.264  Sum_probs=137.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||++|||.++++.|+++|++|++++++.+..   .+++...    .+.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999987765322   2233221    467899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||..  .+..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.+    
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~~~~----  146 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-----KNGAIVNIASNAGIGTAA----  146 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHHhCCCCC----
Confidence            999999999999985  345567899999999999999999999999999865     578999999987764211    


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                           .....|+.||+++++|++.++.
T Consensus       147 -----~~~~~Y~asKaa~~~~~~~la~  168 (255)
T PRK06463        147 -----EGTTFYAITKAGIIILTRRLAF  168 (255)
T ss_pred             -----CCccHhHHHHHHHHHHHHHHHH
Confidence                 1223799999999999999875

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.9e-27  Score=191.64  Aligned_cols=169  Identities=24%  Similarity=0.254  Sum_probs=146.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|++|||||++|||.+++++|+++|++|++++|+.++.++..+.+...  +.++.++.+|+++++++.++++++.+.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            477999999999999999999999999999999999987777776666543  456889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+.+.|.+.    .+.|+||++||..+..+.++.   
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~---  157 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH----SGGGSVINISSTMGRLAGRGF---  157 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh----cCCeEEEEEccccccCCCCCC---
Confidence            999999999999753  34567889999999999999999999999999763    146899999999887764443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||++++++++.+...
T Consensus       158 -------~~Y~~sK~a~~~~~~~~~~e  177 (263)
T PRK07814        158 -------AAYGTAKAALAHYTRLAALD  177 (263)
T ss_pred             -------chhHHHHHHHHHHHHHHHHH
Confidence                   37999999999999988764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=4.9e-27  Score=190.70  Aligned_cols=170  Identities=24%  Similarity=0.290  Sum_probs=143.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++|+. +..+...+++...  +.++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            347899999999999999999999999999999988854 3455555556443  5678899999999999999999999


Q ss_pred             hhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|++|||||...  +..+.+.++|++.+++|+.+++.+++.++++|.++    ...|+||++||..+..+.++..
T Consensus        81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~----~~~g~iv~~sS~~~~~~~~~~~  156 (261)
T PRK08936         81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH----DIKGNIINMSSVHEQIPWPLFV  156 (261)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEccccccCCCCCCc
Confidence            99999999999999853  34567889999999999999999999999999874    1358999999987776644433


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                .|+.+|+++.++++.++..
T Consensus       157 ----------~Y~~sKaa~~~~~~~la~e  175 (261)
T PRK08936        157 ----------HYAASKGGVKLMTETLAME  175 (261)
T ss_pred             ----------ccHHHHHHHHHHHHHHHHH
Confidence                      7999999999999988653

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.96  E-value=3.6e-27  Score=189.86  Aligned_cols=167  Identities=24%  Similarity=0.261  Sum_probs=140.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+..  ++..+.+...  +.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998752  3344444332  456889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.++|++.+++|+.+++.+++.++|.|.++.    ..|+||++||..+..+.+..   
T Consensus        78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~~~~~~---  150 (248)
T TIGR01832        78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG----RGGKIINIASMLSFQGGIRV---  150 (248)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCeEEEEEecHHhccCCCCC---
Confidence            999999999999863  345678899999999999999999999999998641    25899999998877654332   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++.++++.++..
T Consensus       151 -------~~Y~~sKaa~~~~~~~la~e  170 (248)
T TIGR01832       151 -------PSYTASKHGVAGLTKLLANE  170 (248)
T ss_pred             -------chhHHHHHHHHHHHHHHHHH
Confidence                   37999999999999998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.96  E-value=3.1e-27  Score=197.10  Aligned_cols=176  Identities=33%  Similarity=0.440  Sum_probs=141.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|+++||||++|||.++++.|+++| ++|++++|+.++.++..+++..  ++.++.++.+|+++.++++++++++.+.++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999 9999999998877776666542  245788899999999999999999988889


Q ss_pred             CccEEEECCccCCC---CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-----C
Q 027991          110 QLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-----E  181 (216)
Q Consensus       110 ~id~li~~Ag~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----~  181 (216)
                      ++|++|||||+..+   ..+.+.++|+.++++|+.+++.+++.++|.|.+++   .+.|+||++||..+..+..     .
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~~~g~IV~vsS~~~~~~~~~~~~~~  157 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSP---NKDKRLIIVGSITGNTNTLAGNVPP  157 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC---CCCCeEEEEecCccccccCCCcCCC
Confidence            99999999998543   23568899999999999999999999999998641   1248999999988754310     0


Q ss_pred             C---cc---------------CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          182 G---IR---------------FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       182 ~---~~---------------~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .   ..               ......+..+|+.||++...+++.+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  205 (314)
T TIGR01289       158 KANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHR  205 (314)
T ss_pred             cccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHH
Confidence            0   00               011223456899999998888887754

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05855 short chain dehydrogenase; Validated

Probab=99.96  E-value=2.9e-27  Score=211.32  Aligned_cols=171  Identities=30%  Similarity=0.296  Sum_probs=150.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+.++++|||||+||||.+++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4467889999999999999999999999999999999988887777777554  45789999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||+.  .+..+.+.+++++++++|+.+++.+++.++|.|.++    +.+|+||++||.++..+.++.  
T Consensus       389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~--  462 (582)
T PRK05855        389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER----GTGGHIVNVASAAAYAPSRSL--  462 (582)
T ss_pred             hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEECChhhccCCCCC--
Confidence            999999999999986  345678899999999999999999999999999875    125899999999998765543  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              ..|+.||++++++++.++...
T Consensus       463 --------~~Y~~sKaa~~~~~~~l~~e~  483 (582)
T PRK05855        463 --------PAYATSKAAVLMLSECLRAEL  483 (582)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHh
Confidence                    389999999999999987653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=2.8e-27  Score=192.00  Aligned_cols=163  Identities=20%  Similarity=0.144  Sum_probs=140.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++||||++|||.+++++|+++|++|++++|+.+++++..+++...   .++.++++|++|+++++++++++.+.++++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999988887777777542   2578899999999999999999999999999


Q ss_pred             EEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          113 ILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       113 ~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +||||||...    +..+.+.++|.+.+++|+.+++.+++.++|.|.++    ..+|+||++||..+..+.++.      
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~----~~~g~iv~isS~~~~~~~~~~------  148 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK----KMKGVLVYLSSVSVKEPMPPL------  148 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc----CCCCEEEEEeCcccCCCCCCc------
Confidence            9999999752    34567889999999999999999999999998642    147899999999887654433      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ..|+.||+++.+|++.++..
T Consensus       149 ----~~y~~sKaa~~~~~~~la~e  168 (259)
T PRK08340        149 ----VLADVTRAGLVQLAKGVSRT  168 (259)
T ss_pred             ----hHHHHHHHHHHHHHHHHHHH
Confidence                37999999999999998764

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-27  Score=191.88  Aligned_cols=164  Identities=20%  Similarity=0.231  Sum_probs=140.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +++++||||++|||.+++++|+++|++|++++|+.+.+++..+++...  + ++.++++|++|++++.++++++.+.++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999977766555544321  2 7889999999999999999999999999


Q ss_pred             ccEEEECCccCCC--CC-CCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          111 LNILINNAGIMGT--PF-MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       111 id~li~~Ag~~~~--~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      +|++|||||....  .. +.+.+++++++++|+.+++.+++.++|.|.++     +.|+||++||.++..+.++..    
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-----~~~~iv~isS~~~~~~~~~~~----  149 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-----RRGTLVGIASVAGVRGLPGAG----  149 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-----CCCEEEEEechhhcCCCCCCc----
Confidence            9999999998632  22 25778999999999999999999999999875     568999999999988755433    


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            .|+.||++++++++.++..
T Consensus       150 ------~Y~asK~a~~~~~~~l~~e  168 (257)
T PRK07024        150 ------AYSASKAAAIKYLESLRVE  168 (257)
T ss_pred             ------chHHHHHHHHHHHHHHHHH
Confidence                  7999999999999888643

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.7e-27  Score=190.31  Aligned_cols=167  Identities=20%  Similarity=0.263  Sum_probs=142.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.+.. +..+++...  +.++.++.+|++++++++++++++.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTV   78 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999987765 555555544  4568899999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          106 IQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +.++++|++|||||.... ..+...++|++.+++|+.+++.+++.++|.|++.      .|+||++||..+..+.++.  
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~~~~~~--  150 (258)
T PRK08628         79 AKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS------RGAIVNISSKTALTGQGGT--  150 (258)
T ss_pred             HhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc------CcEEEEECCHHhccCCCCC--
Confidence            999999999999997532 2233448999999999999999999999998753      5899999999888764433  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              ..|+.||++++++++.++.
T Consensus       151 --------~~Y~~sK~a~~~~~~~l~~  169 (258)
T PRK08628        151 --------SGYAAAKGAQLALTREWAV  169 (258)
T ss_pred             --------chhHHHHHHHHHHHHHHHH
Confidence                    3899999999999999865

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=4.8e-27  Score=189.24  Aligned_cols=166  Identities=23%  Similarity=0.282  Sum_probs=143.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEE-EEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      |.+++++||||++|||.+++++|+++|++|++ ..|+.++.++..+++...  +.++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999876 477777777777666554  567889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||..  .+..+.+.+++...+++|+.+++.+++++++.|.++     +.|+||++||..+..+.++    
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~~~~~----  150 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-----GGGKIISLSSLGSIRYLEN----  150 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEEcchhhccCCCC----
Confidence            99999999999975  455677899999999999999999999999999875     5789999999877665433    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            ...|+.||++.+++++.+..
T Consensus       151 ------~~~y~~sK~a~~~~~~~~~~  170 (250)
T PRK08063        151 ------YTTVGVSKAALEALTRYLAV  170 (250)
T ss_pred             ------ccHHHHHHHHHHHHHHHHHH
Confidence                  33899999999999988764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.1e-27  Score=190.88  Aligned_cols=162  Identities=25%  Similarity=0.269  Sum_probs=138.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +..++++|++|||||++|||.++++.|+++|++|++++|+.+..          . ..++.++++|++|+++++++++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~-~~~~~~~~~D~~~~~~~~~~~~~~   71 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------L-PEGVEFVAADLTTAEGCAAVARAV   71 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------c-CCceeEEecCCCCHHHHHHHHHHH
Confidence            44568899999999999999999999999999999999985421          1 345788999999999999999999


Q ss_pred             HhhcCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          105 NIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      .+.++++|++|||||..    .+..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.+
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~ii~isS~~~~~~~~  146 (260)
T PRK06523         72 LERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-----GSGVIIHVTSIQRRLPLP  146 (260)
T ss_pred             HHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEecccccCCCC
Confidence            99999999999999964    234467889999999999999999999999999875     568999999988776532


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                               .....|+.+|+++++|++.++.
T Consensus       147 ---------~~~~~Y~~sK~a~~~l~~~~a~  168 (260)
T PRK06523        147 ---------ESTTAYAAAKAALSTYSKSLSK  168 (260)
T ss_pred             ---------CCcchhHHHHHHHHHHHHHHHH
Confidence                     1234899999999999998874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.96  E-value=4.3e-27  Score=190.55  Aligned_cols=165  Identities=24%  Similarity=0.314  Sum_probs=142.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.+|+++||||++|||.++++.|+++|++|++++|+.+..++..+++     +.++.++++|++|+++++++++++.+.
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999987666554443     345888999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.+++.|.++    ..+|+||++||..+..+.++    
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~~----  149 (257)
T PRK07067         78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ----GRGGKIINMASQAGRRGEAL----  149 (257)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc----CCCcEEEEeCCHHhCCCCCC----
Confidence            99999999999986  345577889999999999999999999999999764    13579999999887776543    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            ...|+.||+++.++++.++.
T Consensus       150 ------~~~Y~~sK~a~~~~~~~la~  169 (257)
T PRK07067        150 ------VSHYCATKAAVISYTQSAAL  169 (257)
T ss_pred             ------CchhhhhHHHHHHHHHHHHH
Confidence                  34899999999999988764

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.9e-27  Score=189.76  Aligned_cols=161  Identities=25%  Similarity=0.261  Sum_probs=139.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.++     +    . .+.++.++++|++++++++++++++.+.
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T----V-DGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h----h-cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998643     0    1 1456889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.+++++.+++|+.+++.+++.+.+.|.++    ...|+||++||..+..+.++.   
T Consensus        73 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~~~---  145 (252)
T PRK07856         73 HGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ----PGGGSIVNIGSVSGRRPSPGT---  145 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEcccccCCCCCCC---
Confidence            999999999999753  34567889999999999999999999999999763    135899999999888765544   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       146 -------~~Y~~sK~a~~~l~~~la~e  165 (252)
T PRK07856        146 -------AAYGAAKAGLLNLTRSLAVE  165 (252)
T ss_pred             -------chhHHHHHHHHHHHHHHHHH
Confidence                   38999999999999988653

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.7e-27  Score=191.77  Aligned_cols=165  Identities=19%  Similarity=0.241  Sum_probs=146.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++++||||+||||.+++++|+++|++|++++|+.++.++...++...  +.++.++++|++|++++.++++++.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999988888877777654  5678899999999999999999999999999


Q ss_pred             cEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|.++     +.++||++||..+..+.++.       
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~~~-------  146 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-----KSGRIVNIASMAGLMQGPAM-------  146 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhcCCCCCc-------
Confidence            99999999863  45677889999999999999999999999999875     56899999999888765443       


Q ss_pred             CCCccchHHHHHHHHHHHHHHhhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                         ..|+.+|+++.++++.++...
T Consensus       147 ---~~Y~~sKaa~~~~~~~l~~e~  167 (270)
T PRK05650        147 ---SSYNVAKAGVVALSETLLVEL  167 (270)
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHh
Confidence               489999999999999988754

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.7e-27  Score=189.67  Aligned_cols=165  Identities=25%  Similarity=0.302  Sum_probs=141.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|+++|||+++|||.++++.|+++|++|++++|+.++.++..+++.... +.++.++.+|+++++++++++++   
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~---   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE---   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH---
Confidence            35789999999999999999999999999999999999888777777776543 45688899999999999888764   


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                       ++++|++|||||..  .+..+.+.++|+.++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.+.   
T Consensus        79 -~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~iss~~~~~~~~~---  149 (259)
T PRK06125         79 -AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-----GSGVIVNVIGAAGENPDAD---  149 (259)
T ss_pred             -hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEecCccccCCCCC---
Confidence             47899999999985  345678999999999999999999999999999875     4689999999877665333   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ...|+.+|+++.+|++.++.
T Consensus       150 -------~~~y~ask~al~~~~~~la~  169 (259)
T PRK06125        150 -------YICGSAGNAALMAFTRALGG  169 (259)
T ss_pred             -------chHhHHHHHHHHHHHHHHHH
Confidence                   23789999999999998864

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.4e-27  Score=192.72  Aligned_cols=162  Identities=25%  Similarity=0.296  Sum_probs=140.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+|+++||||+||||.+++++|+++|++|++++|+.++.+...+    .. +.++.++.+|++|++++.++++++.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LH-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hc-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998765544322    22 34688899999999999999999999999


Q ss_pred             CccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|++|||||..  .+..+.+.+++.+++++|+.+++.+++.++|+|+++     +.|+||++||.++..+.++.     
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~iSS~~~~~~~~~~-----  147 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-----RRGHIVNITSMGGLITMPGI-----  147 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----CCCEEEEEecccccCCCCCc-----
Confidence            999999999985  355677889999999999999999999999999875     56899999999888775544     


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                           ..|+.+|++.+++++.++.
T Consensus       148 -----~~Y~~sK~a~~~~~~~la~  166 (277)
T PRK06180        148 -----GYYCGSKFALEGISESLAK  166 (277)
T ss_pred             -----chhHHHHHHHHHHHHHHHH
Confidence                 3899999999999988864

>PRK06182 short chain dehydrogenase; Validated

Probab=99.96  E-value=3.5e-27  Score=192.81  Aligned_cols=161  Identities=32%  Similarity=0.399  Sum_probs=138.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|+++||||+||||.+++++|+++|++|++++|+.+++++..        ...+.++++|++|+++++++++++.+.+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~--------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA--------SLGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999976544322        1247789999999999999999999999


Q ss_pred             CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|++|||||+.  ++..+.+.++++..+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.+..    
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~~~~~~----  143 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-----RSGRIINISSMGGKIYTPLG----  143 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhcCCCCCc----
Confidence            9999999999986  345677899999999999999999999999999875     56899999998876654432    


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ..|+.||++++++++.++..
T Consensus       144 ------~~Y~~sKaa~~~~~~~l~~e  163 (273)
T PRK06182        144 ------AWYHATKFALEGFSDALRLE  163 (273)
T ss_pred             ------cHhHHHHHHHHHHHHHHHHH
Confidence                  26999999999999888753

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-26  Score=187.01  Aligned_cols=168  Identities=20%  Similarity=0.211  Sum_probs=147.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|+++||||++|||.+++++|+++|++|++++|+.++.++..+.+....++.++.++++|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68899999999999999999999999999999998888887777777666778999999999999999999999999999


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||||+..  +..+.+.+.+.+.+++|+.+++.+++.+++.|.+.     +.++||++||..+..+.++       
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~-------  149 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-----GSGHLVLISSVSAVRGLPG-------  149 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEEeccccccCCCC-------
Confidence            999999999863  33455778899999999999999999999999875     5689999999888776442       


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                        +...|+.||++++++++.++..
T Consensus       150 --~~~~Y~~sK~a~~~~~~~l~~~  171 (248)
T PRK08251        150 --VKAAYAASKAGVASLGEGLRAE  171 (248)
T ss_pred             --CcccHHHHHHHHHHHHHHHHHH
Confidence              2348999999999999888753

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.95  E-value=4.9e-27  Score=187.94  Aligned_cols=162  Identities=18%  Similarity=0.162  Sum_probs=135.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||++|||.+++++|+++|++|++++|+.+...   +.+...    .+.++.+|++|+++++++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            578999999999999999999999999999999875432   233221    2567899999999999999999999999


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||||...  ...+.+.++|++++++|+.+++.+++.++|.|.++.   .+.|+||++||..+..+.++.      
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~---~~~g~iv~~ss~~~~~~~~~~------  145 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG---HAASDIIHITDYVVEKGSDKH------  145 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC---CCCceEEEEcchhhccCCCCC------
Confidence            999999999752  344667899999999999999999999999998741   125899999998777654433      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ..|+.||+++++|++.++..
T Consensus       146 ----~~Y~asKaal~~l~~~~a~e  165 (236)
T PRK06483        146 ----IAYAASKAALDNMTLSFAAK  165 (236)
T ss_pred             ----ccHHHHHHHHHHHHHHHHHH
Confidence                38999999999999998764

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.2e-27  Score=191.34  Aligned_cols=158  Identities=32%  Similarity=0.329  Sum_probs=138.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++++++||||+||||.+++++|+++|++|++++|+.++.+.          ..++.++++|++|+++++++++++.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999998654321          23578899999999999999999999999


Q ss_pred             CccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|++|||||+.  .+..+.+.+++++.+++|+.+++.+++.++|.|+++     +.|+||++||.++..+.+..     
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~-----  142 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-----GSGRIINISSVLGFLPAPYM-----  142 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEECCccccCCCCCc-----
Confidence            999999999986  345577899999999999999999999999999876     67899999999887765443     


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           ..|+.||++++++++.+...
T Consensus       143 -----~~Y~~sK~a~~~~~~~l~~e  162 (270)
T PRK06179        143 -----ALYAASKHAVEGYSESLDHE  162 (270)
T ss_pred             -----cHHHHHHHHHHHHHHHHHHH
Confidence                 37999999999999887653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.95  E-value=4.6e-27  Score=208.24  Aligned_cols=165  Identities=22%  Similarity=0.341  Sum_probs=143.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++|+++||||++|||.++++.|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+.+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999987766555444     3467789999999999999999999999


Q ss_pred             CCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          109 HQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       109 ~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +++|+||||||+.    .+..+.+.++|++++++|+.+++.++++++|+|.++    +.+++||++||..+..+.++.. 
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~g~~iv~isS~~~~~~~~~~~-  152 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQ----GHGAAIVNVASGAGLVALPKRT-  152 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCCeEEEECCcccCCCCCCCc-
Confidence            9999999999984    244577899999999999999999999999999864    1234999999999988765543 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+.+|+++.+|++.++..
T Consensus       153 ---------~Y~asKaal~~l~~~la~e  171 (520)
T PRK06484        153 ---------AYSASKAAVISLTRSLACE  171 (520)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHH
Confidence                     8999999999999988653

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.6e-27  Score=192.69  Aligned_cols=158  Identities=25%  Similarity=0.328  Sum_probs=135.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc-C
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-H  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~  109 (216)
                      +|+++||||+||||.+++++|+++|++|++++|+.+.+++.    ..    ..+.++.+|++|+++++++++++.+.+ +
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EA----EGLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HH----CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999997665433    21    246789999999999999999987665 6


Q ss_pred             CccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|++|||||+.  .+..+.+.+++++++++|+.+++.+++.++|.|.++     +.|+||++||.++..+.+.      
T Consensus        76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~~~~~------  144 (277)
T PRK05993         76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-----GQGRIVQCSSILGLVPMKY------  144 (277)
T ss_pred             CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-----CCCEEEEECChhhcCCCCc------
Confidence            899999999986  345577889999999999999999999999999875     5789999999988776443      


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          ...|+.||++++++++.++.
T Consensus       145 ----~~~Y~asK~a~~~~~~~l~~  164 (277)
T PRK05993        145 ----RGAYNASKFAIEGLSLTLRM  164 (277)
T ss_pred             ----cchHHHHHHHHHHHHHHHHH
Confidence                33899999999999998864

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=9.4e-28  Score=183.24  Aligned_cols=160  Identities=23%  Similarity=0.286  Sum_probs=142.5

Q ss_pred             CCCCEEEEeCCC-CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh-
Q 027991           29 GSGLTAIVTGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI-  106 (216)
Q Consensus        29 ~~~k~~lItG~s-~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-  106 (216)
                      -..|++||||++ ||||.+++++|.+.|+.|+.+.|+.+...++..+       ..+....+|+++++++.+...++.. 
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~   77 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRAN   77 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhC
Confidence            346889999998 5999999999999999999999998877665432       2478899999999999999999887 


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .+|.+|+|+||||..  .|..|.+.++.+++|++|++|.+.++|++...+.+      .+|.|||++|..++.|.|... 
T Consensus        78 ~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik------aKGtIVnvgSl~~~vpfpf~~-  150 (289)
T KOG1209|consen   78 PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK------AKGTIVNVGSLAGVVPFPFGS-  150 (289)
T ss_pred             CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH------ccceEEEecceeEEeccchhh-
Confidence            789999999999985  78889999999999999999999999999977777      599999999999999877766 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                               .|.+||||+.++++.|+-
T Consensus       151 ---------iYsAsKAAihay~~tLrl  168 (289)
T KOG1209|consen  151 ---------IYSASKAAIHAYARTLRL  168 (289)
T ss_pred             ---------hhhHHHHHHHHhhhhcEE
Confidence                     899999999999988763

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1.7e-26  Score=185.02  Aligned_cols=169  Identities=28%  Similarity=0.298  Sum_probs=146.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++++++||||+++||.+++++|+++|++|++++|+.++.++..+++...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999988777776666543  56789999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||+|...  +..+.+.+++++.+++|+.+++.+++.+.+.|.++     ..++||++||..+..+.++.  
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~~~--  153 (239)
T PRK07666         81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-----QSGDIINISSTAGQKGAAVT--  153 (239)
T ss_pred             HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCcEEEEEcchhhccCCCCC--
Confidence            9999999999999853  34467889999999999999999999999999875     56899999998887764433  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.+|+++.++++.++..
T Consensus       154 --------~~Y~~sK~a~~~~~~~~a~e  173 (239)
T PRK07666        154 --------SAYSASKFGVLGLTESLMQE  173 (239)
T ss_pred             --------cchHHHHHHHHHHHHHHHHH
Confidence                    37999999999999887643

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=186.84  Aligned_cols=166  Identities=27%  Similarity=0.337  Sum_probs=145.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++.   .+.++.++++|++|+++++++++++.+.
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999877666666554   2567899999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||+|...  +..+.+.+++++.+++|+.+++.+++.+++.|+++     +.++||++||..+..+.++.   
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~sS~~~~~~~~~~---  150 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-----GGGSIVNTASQLALAGGRGR---  150 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-----CCeEEEEECChhhccCCCCc---
Confidence            999999999999863  34567889999999999999999999999999875     56899999999888765443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ..|+.+|+++..+++.++.
T Consensus       151 -------~~Y~~sK~a~~~~~~~l~~  169 (252)
T PRK06138        151 -------AAYVASKGAIASLTRAMAL  169 (252)
T ss_pred             -------cHHHHHHHHHHHHHHHHHH
Confidence                   3799999999999998864

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=187.58  Aligned_cols=166  Identities=24%  Similarity=0.352  Sum_probs=141.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|++|||||++|||.+++++|+++|++|++++|+.+. ....+++    .+.++.++++|++++++++++++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL----LGGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998653 2222222    245677899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.+.+.|.++     +.|+||++||..+..+.+... 
T Consensus        86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~-  159 (255)
T PRK06841         86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-----GGGKIVNLASQAGVVALERHV-  159 (255)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-----CCceEEEEcchhhccCCCCCc-
Confidence            999999999999986  344467889999999999999999999999999875     578999999998887755443 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+.+|++++++++.++..
T Consensus       160 ---------~Y~~sK~a~~~~~~~la~e  178 (255)
T PRK06841        160 ---------AYCASKAGVVGMTKVLALE  178 (255)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHH
Confidence                     7999999999999988654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.95  E-value=1.2e-26  Score=186.63  Aligned_cols=167  Identities=23%  Similarity=0.223  Sum_probs=140.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE-cCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      |++|+++||||++|||.+++++|+++|++|++.. ++....++..+++...  +.++..+.+|++|.+++.++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999988854 4444444555555433  456888899999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+++.|.++     +.|+||++||..+..+.++.   
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~---  150 (246)
T PRK12938         79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQKGQFGQ---  150 (246)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEEechhccCCCCCC---
Confidence            999999999999863  45567899999999999999999999999999875     56899999998877764433   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.+|++++++++.++..
T Consensus       151 -------~~y~~sK~a~~~~~~~l~~~  170 (246)
T PRK12938        151 -------TNYSTAKAGIHGFTMSLAQE  170 (246)
T ss_pred             -------hhHHHHHHHHHHHHHHHHHH
Confidence                   37999999999999887653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.95  E-value=1.7e-26  Score=185.84  Aligned_cols=168  Identities=26%  Similarity=0.313  Sum_probs=141.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC-CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|+++||||++|||.+++++|+++|++|+++.++ .+..++..+++...  +.++.++++|+++++++.++++++.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999877654 44455555555433  45789999999999999999999999


Q ss_pred             hcCCccEEEECCccCCC--CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMGT--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||...+  ..+.+.+++++.+++|+.+++.+++.++|.|.++     ..++||++||.++..+.++   
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~---  152 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-----EEGRIISISSIIGQAGGFG---  152 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchhhcCCCCC---
Confidence            99999999999998643  3456789999999999999999999999999875     5689999999888776433   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.||+++.++++.++..
T Consensus       153 -------~~~Y~~sK~a~~~~~~~l~~~  173 (247)
T PRK12935        153 -------QTNYSAAKAGMLGFTKSLALE  173 (247)
T ss_pred             -------CcchHHHHHHHHHHHHHHHHH
Confidence                   348999999999999888653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.95  E-value=9.8e-27  Score=188.56  Aligned_cols=167  Identities=24%  Similarity=0.289  Sum_probs=140.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~----~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++||||++|||.+++++|++    +|++|++++|+.+.+++..+++....++.++.++++|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999998888888888765456678999999999999999999998876


Q ss_pred             CCc----cEEEECCccCCC----CCC-CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          109 HQL----NILINNAGIMGT----PFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       109 ~~i----d~li~~Ag~~~~----~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +.+    |+||||||....    ..+ .+.+++++++++|+.+++.+++.++|.|.++.   +..|+||++||..+..+.
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~---~~~~~iv~isS~~~~~~~  158 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP---GLNRTVVNISSLCAIQPF  158 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC---CCCCEEEEECCHHhCCCC
Confidence            643    699999998532    122 24688999999999999999999999998641   124799999999887765


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++.          ..|+.||+++++|++.++..
T Consensus       159 ~~~----------~~Y~asKaal~~l~~~la~e  181 (256)
T TIGR01500       159 KGW----------ALYCAGKAARDMLFQVLALE  181 (256)
T ss_pred             CCc----------hHHHHHHHHHHHHHHHHHHH
Confidence            543          38999999999999998754

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-26  Score=185.45  Aligned_cols=170  Identities=26%  Similarity=0.337  Sum_probs=147.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +..+++|+++||||+++||.++++.|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   79 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAA   79 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34577899999999999999999999999999999999988777777766544  4578999999999999999999999


Q ss_pred             hhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|++|||+|...  +..+.+.+++++.+++|+.+++.+++.+.+.|.++     +.|++|++||..+..+.+.. 
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~-  153 (250)
T PRK12939         80 AALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-----GRGRIVNLASDTALWGAPKL-  153 (250)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEECchhhccCCCCc-
Confidence            99999999999999863  34567889999999999999999999999999875     57899999998887765443 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.+|++.+++++.++..
T Consensus       154 ---------~~y~~sK~~~~~~~~~l~~~  173 (250)
T PRK12939        154 ---------GAYVASKGAVIGMTRSLARE  173 (250)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHH
Confidence                     37999999999999887653

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=187.68  Aligned_cols=167  Identities=17%  Similarity=0.104  Sum_probs=138.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      -.+|+++||||++|||.++|++|+++| ++|++++|+.+. +++..+++.... +.++.++++|++|+++++++++++.+
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh
Confidence            356899999999999999999999996 899999999876 777777776542 34789999999999999999999876


Q ss_pred             hcCCccEEEECCccCCCCCC--CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~--~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                       ++++|++|||+|...+..+  .+.++..+.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.  
T Consensus        85 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-----~~~~iv~isS~~g~~~~~~~--  156 (253)
T PRK07904         85 -GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-----GFGQIIAMSSVAGERVRRSN--  156 (253)
T ss_pred             -cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-----CCceEEEEechhhcCCCCCC--
Confidence             5899999999998754221  2345566789999999999999999999976     57899999999876653332  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.||+++.+|++.+...
T Consensus       157 --------~~Y~~sKaa~~~~~~~l~~e  176 (253)
T PRK07904        157 --------FVYGSTKAGLDGFYLGLGEA  176 (253)
T ss_pred             --------cchHHHHHHHHHHHHHHHHH
Confidence                    36999999999999887643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.95  E-value=7.8e-27  Score=188.16  Aligned_cols=166  Identities=25%  Similarity=0.285  Sum_probs=144.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ....+|.|+|||.-+|+|..+|++|.++|++|++...+++.++....+.+    +.++..++.|+|++++++++.+.+++
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            34668999999999999999999999999999999988777776665554    56888899999999999999998887


Q ss_pred             hc--CCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          107 QH--HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       107 ~~--~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.  .++..||||||++   ++.+-.+.+++.+++++|+.|++.++++++|+++++      .|||||+||..|..+.|.
T Consensus       101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a------rGRvVnvsS~~GR~~~p~  174 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA------RGRVVNVSSVLGRVALPA  174 (322)
T ss_pred             hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc------cCeEEEecccccCccCcc
Confidence            54  3699999999976   344556889999999999999999999999999985      899999999999887665


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..          +|+.||++.++++-.++..
T Consensus       175 ~g----------~Y~~SK~aVeaf~D~lR~E  195 (322)
T KOG1610|consen  175 LG----------PYCVSKFAVEAFSDSLRRE  195 (322)
T ss_pred             cc----------cchhhHHHHHHHHHHHHHH
Confidence            54          8899999999999888753

>PLN00015 protochlorophyllide reductase

Probab=99.95  E-value=7.4e-27  Score=194.34  Aligned_cols=173  Identities=33%  Similarity=0.447  Sum_probs=137.6

Q ss_pred             EEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           35 IVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        35 lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      +||||++|||.+++++|+++| ++|++++|+.++.++..+++...  +.++.++++|++|.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999987777666665322  456888999999999999999999988899999


Q ss_pred             EEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-----CCccC
Q 027991          114 LINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-----EGIRF  185 (216)
Q Consensus       114 li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----~~~~~  185 (216)
                      ||||||+..   +..+.+.++|+++|++|+.+++.+++.++|.|.++.   ..+|+||++||..+..+..     +....
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~---~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD---YPSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCCCEEEEEeccccccccccccCCCccch
Confidence            999999853   344678999999999999999999999999998751   0158999999988754311     00000


Q ss_pred             --------------------CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 --------------------DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 --------------------~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                          +....+..+|+.||++...+++.+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~  202 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRR  202 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHh
Confidence                                011234568999999977777776653

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=189.69  Aligned_cols=163  Identities=25%  Similarity=0.280  Sum_probs=141.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+|+++||||+||||.+++++|+++|++|++++|+.+++++..+.+     +.++.++++|++|+++++++++.+.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999977655443322     34578889999999999999999999999


Q ss_pred             CccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|++|||||..  ++..+.+.+++++++++|+.+++.+++.++|.|+++     +.++||++||.++..+.++..    
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~~~~----  147 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-----RSGHIIQISSIGGISAFPMSG----  147 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEcChhhcCCCCCcc----
Confidence            999999999986  345577899999999999999999999999999875     568999999998888755443    


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            .|+.+|++.+++++.++..
T Consensus       148 ------~Y~~sKaa~~~~~~~la~e  166 (275)
T PRK08263        148 ------IYHASKWALEGMSEALAQE  166 (275)
T ss_pred             ------HHHHHHHHHHHHHHHHHHH
Confidence                  7999999999999888653

>PRK12743 oxidoreductase; Provisional

Probab=99.95  E-value=1.9e-26  Score=186.79  Aligned_cols=165  Identities=25%  Similarity=0.330  Sum_probs=140.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC-CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|+++||||++|||.+++++|+++|++|++++++ .+..+...+++...  +.++.++.+|++++++++++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999988754 44455555555543  56788999999999999999999999999


Q ss_pred             CccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|++|||+|...  +..+.+.+++++.+++|+.+++.+++.+.++|.++    +.+|+||++||..+..+.++.     
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~----~~~g~ii~isS~~~~~~~~~~-----  150 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ----GQGGRIINITSVHEHTPLPGA-----  150 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCeEEEEEeeccccCCCCCc-----
Confidence            9999999999863  34567889999999999999999999999999764    135899999998877664433     


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                           ..|+.+|+++.++++.++.
T Consensus       151 -----~~Y~~sK~a~~~l~~~la~  169 (256)
T PRK12743        151 -----SAYTAAKHALGGLTKAMAL  169 (256)
T ss_pred             -----chhHHHHHHHHHHHHHHHH
Confidence                 3899999999999998865

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-26  Score=186.55  Aligned_cols=168  Identities=27%  Similarity=0.251  Sum_probs=144.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|++|||||+++||.++++.|+++|++|++++|+++..++..+++...  +.++.++++|++|+++++++++++...
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877777777554  557888999999999999999999988


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHH-HHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTM-KKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|++|||||...  +..+.+.++++..+++|+.+++.+++.+++.| .+.     +.++||++||..+..+.+.   
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~~~~iv~~ss~~~~~~~~~---  153 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-----RGGVVIYMGSVHSHEASPL---  153 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-----CCcEEEEEcchhhcCCCCC---
Confidence            999999999999863  33456788999999999999999999999999 543     5689999999877654332   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.+|++.+++++.+...
T Consensus       154 -------~~~y~~sk~a~~~~~~~la~~  174 (262)
T PRK13394        154 -------KSAYVTAKHGLLGLARVLAKE  174 (262)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHH
Confidence                   348999999999999887653

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-26  Score=186.73  Aligned_cols=167  Identities=24%  Similarity=0.318  Sum_probs=140.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+ ..+..+++...  +.++.++++|++++++++++++++.+.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999864 34444444432  456889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccCCcc
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~  184 (216)
                      ++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.+++.|.++     ..++||++||..+.. +.++   
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~---  151 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-----KDGRIVMMSSVTGDMVADPG---  151 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEECcHHhcccCCCC---
Confidence            99999999999985  345567889999999999999999999999998764     467999999977643 3222   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.+|++++++++.++..
T Consensus       152 -------~~~Y~~sK~a~~~~~~~la~~  172 (263)
T PRK08226        152 -------ETAYALTKAAIVGLTKSLAVE  172 (263)
T ss_pred             -------cchHHHHHHHHHHHHHHHHHH
Confidence                   337999999999999988754

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.4e-26  Score=186.17  Aligned_cols=168  Identities=23%  Similarity=0.234  Sum_probs=139.0

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCC-----------cchHHHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           28 DGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDI-----------AAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        28 ~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      .+++|++|||||++  |||.+++++|+++|++|++++|+.           .......+++...  +.++.++++|++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   79 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            46789999999995  999999999999999999999872           1112223333222  45789999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      ++++++++++.+.++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.+++.|.++     ..|+||++||
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~ss  154 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK-----AGGRIINLTS  154 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-----CCeEEEEECC
Confidence            999999999999999999999999985  345567889999999999999999999999999764     5689999999


Q ss_pred             CcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          173 EGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+..+.++.          ..|+.+|++++++++.++..
T Consensus       155 ~~~~~~~~~~----------~~Y~~sK~a~~~~~~~la~e  184 (256)
T PRK12748        155 GQSLGPMPDE----------LAYAATKGAIEAFTKSLAPE  184 (256)
T ss_pred             ccccCCCCCc----------hHHHHHHHHHHHHHHHHHHH
Confidence            8776654433          37999999999999987653

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-26  Score=185.25  Aligned_cols=166  Identities=28%  Similarity=0.281  Sum_probs=142.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.+..+...+++...  +.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999977666666665543  34677899999999999999999999


Q ss_pred             hcCCccEEEECCccCC-----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          107 QHHQLNILINNAGIMG-----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~-----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      .++++|++|||||...     +..+.+.+++++.+++|+.+++.+++.+++.|.+.     +.|+||++||..+..+   
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~---  151 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-----GGGAIVNQSSTAAWLY---  151 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-----CCcEEEEEecccccCC---
Confidence            9999999999999853     33466889999999999999999999999999875     5789999999876432   


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ...|+.||++.+++++.+...
T Consensus       152 ----------~~~Y~~sK~a~~~~~~~l~~~  172 (250)
T PRK07774        152 ----------SNFYGLAKVGLNGLTQQLARE  172 (250)
T ss_pred             ----------ccccHHHHHHHHHHHHHHHHH
Confidence                      247999999999999988653

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2e-26  Score=185.45  Aligned_cols=163  Identities=25%  Similarity=0.287  Sum_probs=139.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++     +.++.++++|++|.+++.++++++.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999876555444333     456788999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.+++++++++|+.+++.++++++|+|.+       .+++|+++|..+..+.+..   
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~i~~~S~~~~~~~~~~---  147 (249)
T PRK06500         78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-------PASIVLNGSINAHIGMPNS---  147 (249)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEechHhccCCCCc---
Confidence            999999999999753  3456788999999999999999999999999863       4789999998887765433   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.+|++++++++.++..
T Consensus       148 -------~~Y~~sK~a~~~~~~~la~e  167 (249)
T PRK06500        148 -------SVYAASKAALLSLAKTLSGE  167 (249)
T ss_pred             -------cHHHHHHHHHHHHHHHHHHH
Confidence                   48999999999999988754

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-26  Score=184.50  Aligned_cols=169  Identities=22%  Similarity=0.227  Sum_probs=143.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC--HHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS--LASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~  105 (216)
                      .|++|+++||||++|||.+++++|+++|++|++++|+.+..+...+++.... +....++++|+++  .+++.++++++.
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999888777777765432 3456788999985  568899999988


Q ss_pred             hhc-CCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          106 IQH-HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       106 ~~~-~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+ +.+|++|||||..   .+..+.+.+++.+.+++|+.+++.+++.++|.|.+.     +.|+||++||..+..+.+.
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~~  156 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-----PDASVIFVGESHGETPKAY  156 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-----CCCEEEEEeccccccCCCC
Confidence            887 7899999999975   345677899999999999999999999999999875     5789999999887765443


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||++++++++.++..
T Consensus       157 ~----------~~Y~~sKaa~~~~~~~la~e  177 (239)
T PRK08703        157 W----------GGFGASKAALNYLCKVAADE  177 (239)
T ss_pred             c----------cchHHhHHHHHHHHHHHHHH
Confidence            3          37999999999999888653

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-26  Score=187.08  Aligned_cols=162  Identities=22%  Similarity=0.187  Sum_probs=140.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh-cCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ-HHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~~~  110 (216)
                      |++|||||++|||.+++++|+++|++|++++|+.+..++..+.+    ++.++.++++|++|.+++.++++++.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL----GAGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            78999999999999999999999999999999977655554433    2467899999999999999999988776 789


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||||...  +..+.+.+++++++++|+.+++.+++++.+.|.++     ++++||++||..+..+.++.      
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~------  146 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-----PGARVINTSSASAIYGQPGL------  146 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEeCchhhCcCCCCc------
Confidence            999999999863  34567889999999999999999999999999875     57899999999888875543      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ..|+.||++++++++.+...
T Consensus       147 ----~~Y~~sKaa~~~~~~~l~~~  166 (260)
T PRK08267        147 ----AVYSATKFAVRGLTEALDLE  166 (260)
T ss_pred             ----hhhHHHHHHHHHHHHHHHHH
Confidence                38999999999999988653

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=4.2e-27  Score=194.58  Aligned_cols=172  Identities=17%  Similarity=0.154  Sum_probs=129.2

Q ss_pred             CCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHH--------hhcCCC-----eEEEEEc
Q 027991           25 DGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV--------KEIPSA-----KVDAMEL   89 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--------~~~~~~-----~~~~~~~   89 (216)
                      +..+++||+++|||++  +|||+++|+.|+++|++|++.++.+ .+....+...        ....+.     ++..+.+
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            4677899999999996  9999999999999999999987541 0111000000        000000     0111223


Q ss_pred             cCCC------------------HHHHHHHHHHHHhhcCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHH
Q 027991           90 DLSS------------------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLT  147 (216)
Q Consensus        90 Dv~~------------------~~~~~~~~~~~~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~  147 (216)
                      |+++                  +++++++++++.+++|++|+||||||..    .+..+.+.++|++.+++|+.++++++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            3332                  2468999999999999999999999863    35668899999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       148 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      |+++|+|++       .|+||+++|..+..+.|+..         ..|+.||+++++|++.++...
T Consensus       161 ~a~~p~m~~-------~G~ii~iss~~~~~~~p~~~---------~~Y~asKaAl~~lt~~la~el  210 (299)
T PRK06300        161 SHFGPIMNP-------GGSTISLTYLASMRAVPGYG---------GGMSSAKAALESDTKVLAWEA  210 (299)
T ss_pred             HHHHHHhhc-------CCeEEEEeehhhcCcCCCcc---------HHHHHHHHHHHHHHHHHHHHh
Confidence            999999964       57999999988877654321         259999999999999998654

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.2e-26  Score=184.91  Aligned_cols=167  Identities=20%  Similarity=0.230  Sum_probs=139.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC-CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ..+|++|||||++|||.+++++|+++|++|+++.++ .+..+...+++...  +.++.++.+|++|.+++.++++++.+.
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999888765 34455555555443  457889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.+++++++++|+.+++.+++.+.+.|.++     ..|+||+++|..+..+.|.+   
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~~s~~~~~~~p~~---  156 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-----ARGLVVNMIDQRVWNLNPDF---  156 (258)
T ss_pred             cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCceEEEECchhhcCCCCCc---
Confidence            999999999999863  45577889999999999999999999999999865     46899999987665443332   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||++++++++.+...
T Consensus       157 -------~~Y~~sK~a~~~~~~~la~~  176 (258)
T PRK09134        157 -------LSYTLSKAALWTATRTLAQA  176 (258)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHH
Confidence                   37999999999999998753

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=3.1e-26  Score=185.07  Aligned_cols=167  Identities=28%  Similarity=0.291  Sum_probs=146.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|++|||||+++||.+++++|+++|++|++++|+.++.+...+++...  +.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988777776666543  5678899999999999999999999999


Q ss_pred             CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +.+|++|||||...  +..+.+.+++++.+++|+.+++.+++.+++.|.++     +.++||++||..+..+.++.    
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~iss~~~~~~~~~~----  150 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-----GGGRIINMASVHGLVGSAGK----  150 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----CCeEEEEEcchhhccCCCCc----
Confidence            99999999999753  34567888999999999999999999999999875     57899999999888775543    


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ..|+.+|++++++++.+...
T Consensus       151 ------~~y~~~k~a~~~~~~~l~~~  170 (258)
T PRK12429        151 ------AAYVSAKHGLIGLTKVVALE  170 (258)
T ss_pred             ------chhHHHHHHHHHHHHHHHHH
Confidence                  48999999999999887553

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.3e-26  Score=186.03  Aligned_cols=166  Identities=23%  Similarity=0.223  Sum_probs=143.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++++++||||++|||.+++++|+++|++|++++|+.+..++...++  .. +.++.++.+|++|+++++++++.+.+ 
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~~~D~~d~~~~~~~~~~~~~-   77 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--PY-PGRHRWVVADLTSEAGREAVLARARE-   77 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--hc-CCceEEEEccCCCHHHHHHHHHHHHh-
Confidence            467899999999999999999999999999999999987777666655  22 45788999999999999999998876 


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|+|.++     +.|+||++||..+..+.++.   
T Consensus        78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~---  149 (263)
T PRK09072         78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-----PSAMVVNVGSTFGSIGYPGY---  149 (263)
T ss_pred             cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEecChhhCcCCCCc---
Confidence            789999999999853  45567889999999999999999999999999875     46899999999888765443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.+|+++.++++.++..
T Consensus       150 -------~~Y~~sK~a~~~~~~~l~~~  169 (263)
T PRK09072        150 -------ASYCASKFALRGFSEALRRE  169 (263)
T ss_pred             -------cHHHHHHHHHHHHHHHHHHH
Confidence                   37999999999999888754

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.5e-26  Score=183.46  Aligned_cols=166  Identities=28%  Similarity=0.280  Sum_probs=143.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++|+++||||+++||..++++|+++|++|++++|+.++.++..+.+...  +.++.++.+|+++++++.++++++.+.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4589999999999999999999999999999999987776666666543  45788999999999999999999999999


Q ss_pred             CccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|++|||||...  +..+.+.++++.++++|+.+++.+++.+++.|.++     +.++||++||..+..+.++.     
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~-----  152 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-----GGGLIINVSSIAARNAFPQW-----  152 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCcCCCCc-----
Confidence            9999999999863  34566889999999999999999999999999875     56899999998877654433     


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           ..|+.+|++.+.+++.++..
T Consensus       153 -----~~Y~~sK~~~~~~~~~~a~e  172 (241)
T PRK07454        153 -----GAYCVSKAALAAFTKCLAEE  172 (241)
T ss_pred             -----cHHHHHHHHHHHHHHHHHHH
Confidence                 37999999999999887653

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.3e-26  Score=186.87  Aligned_cols=167  Identities=26%  Similarity=0.308  Sum_probs=143.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |.+|++|||||+|+||.++++.|+++|++|++++|+.+..++..+++.....+.++.++.+|++|++++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            35789999999999999999999999999999999987777666655543224578999999999999999 99998889


Q ss_pred             CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.|++.     +.++||++||..+..+.++.    
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~~~----  150 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-----KSGKIINISSISGRVGFPGL----  150 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEECcccccCCCCCC----
Confidence            99999999999863  34567889999999999999999999999999875     56899999998887765443    


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            ..|+.+|+++.++++.++.
T Consensus       151 ------~~Y~~sK~~~~~~~~~l~~  169 (280)
T PRK06914        151 ------SPYVSSKYALEGFSESLRL  169 (280)
T ss_pred             ------chhHHhHHHHHHHHHHHHH
Confidence                  3799999999999998864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.95  E-value=4.2e-26  Score=183.62  Aligned_cols=167  Identities=25%  Similarity=0.269  Sum_probs=145.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|++|||||+++||.+++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|++++++++++++++.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999987776666666543  4568899999999999999999999999


Q ss_pred             CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|++|||+|..  .+..+.+.+++++.+++|+.+++.+++.+.+.|.++     +.++||++||..+..+.++.    
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~iss~~~~~~~~~~----  149 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-----GAGRIVNIASDAARVGSSGE----  149 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCeEEEEECchhhccCCCCC----
Confidence            9999999999975  344566888999999999999999999999999875     56899999999887765443    


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ..|+.+|++++++++.++..
T Consensus       150 ------~~Y~~sK~a~~~~~~~la~~  169 (250)
T TIGR03206       150 ------AVYAACKGGLVAFSKTMARE  169 (250)
T ss_pred             ------chHHHHHHHHHHHHHHHHHH
Confidence                  37999999999999988764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.95  E-value=4.6e-26  Score=182.73  Aligned_cols=166  Identities=26%  Similarity=0.304  Sum_probs=141.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||+++||.++++.|+++|+.|++.+|+.+++++..+.+     +.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999988876665544332     34678899999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++.+.+.+.++     ..++||++||..+..+.++.. 
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~-  150 (245)
T PRK12936         77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-----RYGRIINITSVVGVTGNPGQA-  150 (245)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-----CCCEEEEECCHHhCcCCCCCc-
Confidence            9999999999999863  34566788999999999999999999999988765     568999999998888765433 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+.+|++..++++.++..
T Consensus       151 ---------~Y~~sk~a~~~~~~~la~~  169 (245)
T PRK12936        151 ---------NYCASKAGMIGFSKSLAQE  169 (245)
T ss_pred             ---------chHHHHHHHHHHHHHHHHH
Confidence                     7999999999999887653

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.1e-26  Score=185.60  Aligned_cols=169  Identities=20%  Similarity=0.147  Sum_probs=144.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|++||||++++||.++++.|+++|++|++++|+.++.+...+++.......++.++.+|++|++++.++++++.++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999998776666666544322357889999999999999999999999


Q ss_pred             cCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|++|||||..   .+..+.+.+++..++++|+.+++.+++.+++.|.++     +.|+|+++||..+..+.++   
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~~sS~~~~~~~~~---  155 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-----GGGSFVGISSIAASNTHRW---  155 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhcCCCCC---
Confidence            99999999999975   345567889999999999999999999999999864     4689999999887655332   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ...|+.+|++++.+++.+..
T Consensus       156 -------~~~Y~~sK~a~~~~~~~~~~  175 (276)
T PRK05875        156 -------FGAYGVTKSAVDHLMKLAAD  175 (276)
T ss_pred             -------CcchHHHHHHHHHHHHHHHH
Confidence                   34899999999999998864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=5.8e-26  Score=183.12  Aligned_cols=165  Identities=22%  Similarity=0.274  Sum_probs=135.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|+++||||++|||.++++.|+++|++|+++.++. +..+.    +..+. +.++.++++|++++++++++++++.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEA----LADEL-GDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHH----HHHHh-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999876643 33332    22222 35688899999999999999999988


Q ss_pred             hcCC-ccEEEECCccC--------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          107 QHHQ-LNILINNAGIM--------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       107 ~~~~-id~li~~Ag~~--------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      .+++ +|++|||||..        .+..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..
T Consensus        77 ~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~  151 (253)
T PRK08642         77 HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-----GFGRIINIGTNLFQN  151 (253)
T ss_pred             HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-----CCeEEEEECCccccC
Confidence            8887 99999999863        234467889999999999999999999999999765     568999999975543


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          .+...|+.||+++++|++.++..
T Consensus       152 ~~----------~~~~~Y~~sK~a~~~l~~~la~~  176 (253)
T PRK08642        152 PV----------VPYHDYTTAKAALLGLTRNLAAE  176 (253)
T ss_pred             CC----------CCccchHHHHHHHHHHHHHHHHH
Confidence            32          23348999999999999998653

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.3e-26  Score=185.37  Aligned_cols=166  Identities=27%  Similarity=0.316  Sum_probs=141.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+++||||++|||.+++++|+++|++|++++|+.+..++..+++.... .....++.+|++|+++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999999877777777765542 3345668999999999999999999999999


Q ss_pred             cEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |++|||+|..  .+..+.+.+++++.+++|+.+++.+++.++|.|.++    ...|+||++||..+..+.++..      
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~----~~~g~ii~isS~~~~~~~~~~~------  149 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA----GRGGHLVNVSSAAGLVALPWHA------  149 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCCcEEEEEccccccCCCCCCc------
Confidence            9999999975  345678999999999999999999999999999763    1358999999988776654433      


Q ss_pred             CCCccchHHHHHHHHHHHHHHhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          .|+.||+++.++++.+...
T Consensus       150 ----~Y~~sK~a~~~~~~~l~~e  168 (272)
T PRK07832        150 ----AYSASKFGLRGLSEVLRFD  168 (272)
T ss_pred             ----chHHHHHHHHHHHHHHHHH
Confidence                7999999999999888754

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7.1e-26  Score=183.20  Aligned_cols=176  Identities=25%  Similarity=0.390  Sum_probs=147.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ....+++|+++||||++|||.++++.|+++|++|++++|+.+++++..+++...  ..++.++.+|+++.++++++++++
T Consensus         3 ~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (258)
T PRK06949          3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHA   80 (258)
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            345588999999999999999999999999999999999988877777666544  346889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc---CCCCcEEEEEcCCcccccc
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK---SGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~---~~~~g~iv~isS~~~~~~~  179 (216)
                      .+.++++|++|||+|...  +..+.+.++++.++++|+.+++.+++.+++.|.++...   ....|+||++||..+..+.
T Consensus        81 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  160 (258)
T PRK06949         81 ETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL  160 (258)
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC
Confidence            999999999999999753  34466789999999999999999999999999865211   1125799999998877653


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ...|+.+|++.+.+++.++..
T Consensus       161 ~~----------~~~Y~~sK~a~~~~~~~la~~  183 (258)
T PRK06949        161 PQ----------IGLYCMSKAAVVHMTRAMALE  183 (258)
T ss_pred             CC----------ccHHHHHHHHHHHHHHHHHHH
Confidence            33          337999999999999988664

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=6.9e-26  Score=182.35  Aligned_cols=167  Identities=29%  Similarity=0.332  Sum_probs=144.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++++++|||||+|+||.+++++|+++|++|++++|+.++.+.....+..   +.++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALER   78 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998776666555543   356889999999999999999999888


Q ss_pred             cCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|++|||+|...   +..+.+.+++++.+++|+.+++.+++.+++.|.++     ..++||++||..+..+.++   
T Consensus        79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~---  150 (251)
T PRK07231         79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-----GGGAIVNVASTAGLRPRPG---  150 (251)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhcCCCCC---
Confidence            999999999999852   34567889999999999999999999999999875     5689999999888776443   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.+|++++.+++.++..
T Consensus       151 -------~~~y~~sk~~~~~~~~~~a~~  171 (251)
T PRK07231        151 -------LGWYNASKGAVITLTKALAAE  171 (251)
T ss_pred             -------chHHHHHHHHHHHHHHHHHHH
Confidence                   337999999999999887653

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.1e-26  Score=186.31  Aligned_cols=168  Identities=23%  Similarity=0.226  Sum_probs=142.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+. .+...+.+...  +.++.++.+|+++.++++++++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            45778999999999999999999999999999999998643 44444444322  4578899999999999999999999


Q ss_pred             hhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|++|||||..   .+..+.+.++|.+++++|+.+++.+++++++.|.+       .|+||++||..+..+.+..
T Consensus       120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-------~g~iV~isS~~~~~~~~~~  192 (290)
T PRK06701        120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-------GSAIINTGSITGYEGNETL  192 (290)
T ss_pred             HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------CCeEEEEecccccCCCCCc
Confidence            9999999999999975   24557789999999999999999999999999853       4799999999888765543


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                                ..|+.||++++++++.++...
T Consensus       193 ----------~~Y~~sK~a~~~l~~~la~~~  213 (290)
T PRK06701        193 ----------IDYSATKGAIHAFTRSLAQSL  213 (290)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHh
Confidence                      379999999999999988654

>PRK07069 short chain dehydrogenase; Validated

Probab=99.95  E-value=6e-26  Score=182.81  Aligned_cols=164  Identities=21%  Similarity=0.188  Sum_probs=140.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcC-CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++||||++|||.++++.|+++|++|++++|+ .+.++...+++...........+++|++|+++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 666666666665443233456688999999999999999999999999


Q ss_pred             EEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCC
Q 027991          113 ILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  190 (216)
                      ++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++..       
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~ss~~~~~~~~~~~-------  149 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-----QPASIVNISSVAAFKAEPDYT-------  149 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEecChhhccCCCCCc-------
Confidence            9999999863  45567889999999999999999999999999875     568999999998887655443       


Q ss_pred             CCccchHHHHHHHHHHHHHHhh
Q 027991          191 PSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         .|+.+|++++++++.++..
T Consensus       150 ---~Y~~sK~a~~~~~~~la~e  168 (251)
T PRK07069        150 ---AYNASKAAVASLTKSIALD  168 (251)
T ss_pred             ---hhHHHHHHHHHHHHHHHHH
Confidence               7999999999999987653

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.9e-26  Score=185.77  Aligned_cols=162  Identities=27%  Similarity=0.367  Sum_probs=137.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .|++|||||+||||.+++++|+++|++|++++|+.+..++..+    .. +.++.++++|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA----RY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hc-cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3789999999999999999999999999999998765444332    22 346889999999999999999999888999


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||||..  .+..+.+.+++++.+++|+.+++.+++.++|+|+++     ..++||++||..+..+.|+       
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~-------  144 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-----GGGRIVQVSSEGGQIAYPG-------  144 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcCcccccCCCC-------
Confidence            99999999986  344566788999999999999999999999999865     5689999999877665443       


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ...|+.||++.+++++.++..
T Consensus       145 ---~~~Y~~sK~a~~~~~~~l~~~  165 (276)
T PRK06482        145 ---FSLYHATKWGIEGFVEAVAQE  165 (276)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHH
Confidence               348999999999999888653

>TIGR02415 23BDH acetoin reductases

Probab=99.95  E-value=7.7e-26  Score=182.61  Aligned_cols=164  Identities=22%  Similarity=0.270  Sum_probs=142.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+++||||+++||.+++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++.++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999977766666666543  5678899999999999999999999999999


Q ss_pred             cEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |++|||||..  .+..+.+.+++++.+++|+.+++.+++.+++.|.++    +.+++||++||..+..+.++.       
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~~~-------  147 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQ----GHGGKIINAASIAGHEGNPIL-------  147 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC----CCCeEEEEecchhhcCCCCCC-------
Confidence            9999999985  345577899999999999999999999999999874    124799999999888876543       


Q ss_pred             CCCccchHHHHHHHHHHHHHHh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                         ..|+.+|++++++++.+..
T Consensus       148 ---~~Y~~sK~a~~~~~~~l~~  166 (254)
T TIGR02415       148 ---SAYSSTKFAVRGLTQTAAQ  166 (254)
T ss_pred             ---cchHHHHHHHHHHHHHHHH
Confidence               3799999999999988754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-25  Score=182.50  Aligned_cols=172  Identities=24%  Similarity=0.278  Sum_probs=145.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|++|||||+++||.+++++|+++|++|++++|+.++.+...+++...  +.++.++++|++|+++++++++++.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3477999999999999999999999999999999999987766666655443  45678899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHH-HHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDT-MKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|++|||||..  .+..+.+.+.|++.+++|+.+++.+++++.++ |.++     +.++||++||..+..+.++..
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-----~~~~~v~~sS~~~~~~~~~~~  160 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-----GYGRIINVASVAGLGGNPPEV  160 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-----CCeEEEEECChhhccCCCccc
Confidence            899999999999975  34456788999999999999999999999998 6654     467999999988777654321


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            .+...|+.+|++.+++++.++.
T Consensus       161 ------~~~~~Y~~sKa~~~~~~~~~a~  182 (259)
T PRK08213        161 ------MDTIAYNTSKGAVINFTRALAA  182 (259)
T ss_pred             ------cCcchHHHHHHHHHHHHHHHHH
Confidence                  2335899999999999998765

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.95  E-value=8e-26  Score=205.32  Aligned_cols=173  Identities=24%  Similarity=0.303  Sum_probs=149.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+.+|++|||||++|||.+++++|+++|++|++++|+.+.++...+++...++..++..+++|++|+++++++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988777777776655444567889999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|++|||||+.  .+..+.+.++|+..+++|+.+++.+++.+++.|+++    +.+|+||++||..+..+.++. 
T Consensus       489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~----~~~g~IV~iSS~~a~~~~~~~-  563 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQ----GLGGNIVFIASKNAVYAGKNA-  563 (676)
T ss_pred             HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEEEeChhhcCCCCCC-
Confidence            9999999999999986  345567899999999999999999999999999864    125799999998887765443 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||++.+++++.++..
T Consensus       564 ---------~aY~aSKaA~~~l~r~lA~e  583 (676)
T TIGR02632       564 ---------SAYSAAKAAEAHLARCLAAE  583 (676)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHH
Confidence                     48999999999999988653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.94  E-value=1.5e-25  Score=180.76  Aligned_cols=160  Identities=23%  Similarity=0.355  Sum_probs=137.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++++||||+||||.++++.|+++|++|++++|+.++++...+.+     +.++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999977655544332     3468889999999999999999999999999


Q ss_pred             cEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          112 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       112 d~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      |++|||||..   .+..+.+.+++++++++|+.+++.+++.++|.|.++     +.++||++||..+..+.++.      
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~------  144 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSWPYAGG------  144 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECCcccCCCCCCC------
Confidence            9999999975   245567899999999999999999999999999875     56899999998877654332      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          ..|+.+|+++.++++.++.
T Consensus       145 ----~~Y~~sK~~~~~~~~~l~~  163 (248)
T PRK10538        145 ----NVYGATKAFVRQFSLNLRT  163 (248)
T ss_pred             ----chhHHHHHHHHHHHHHHHH
Confidence                3799999999999988864

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.94  E-value=1.6e-25  Score=180.59  Aligned_cols=160  Identities=26%  Similarity=0.341  Sum_probs=138.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|++|||||+++||.+++++|+++|++|++++|+.         +...  +.++.++++|++++++++++++++.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            558899999999999999999999999999999999985         1111  45688999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||+|..  .+..+.+.+++.+.+++|+.+++.+++.+++.|+++     +.|+||++||..+..+.++   
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~~ss~~~~~~~~~---  144 (252)
T PRK08220         73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-----RSGAIVTVGSNAAHVPRIG---  144 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECCchhccCCCC---
Confidence            999999999999985  345567889999999999999999999999999875     5689999999877665433   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.||++++++++.++..
T Consensus       145 -------~~~Y~~sK~a~~~~~~~la~e  165 (252)
T PRK08220        145 -------MAAYGASKAALTSLAKCVGLE  165 (252)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHH
Confidence                   348999999999999888754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.7e-25  Score=179.57  Aligned_cols=166  Identities=28%  Similarity=0.352  Sum_probs=140.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|+++||||++|||.+++++|+++|++|+++.++.+ ..++..+++...  +.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999988877643 345555555443  56789999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|.+       .|+||++||..+..+.++.  
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~~~--  150 (245)
T PRK12937         80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-------GGRIINLSTSVIALPLPGY--  150 (245)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-------CcEEEEEeeccccCCCCCC--
Confidence            9999999999999853  4456788999999999999999999999999863       5799999998777664443  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.+|++++.+++.++..
T Consensus       151 --------~~Y~~sK~a~~~~~~~~a~~  170 (245)
T PRK12937        151 --------GPYAASKAAVEGLVHVLANE  170 (245)
T ss_pred             --------chhHHHHHHHHHHHHHHHHH
Confidence                    37999999999999887653

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2e-25  Score=182.67  Aligned_cols=167  Identities=24%  Similarity=0.315  Sum_probs=142.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++.+|+++||||+++||.+++++|+++|++|++++|+.+..++..+++...  +.++.++++|+++++++.++++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999877666655555433  456888999999999999999999988


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.+++.+.+++|+.+++.+++.+++.|.++     ..|+||++||..+..+.++    
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~g~iv~isS~~~~~~~~~----  155 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-----RRGDLIFVGSDVALRQRPH----  155 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCceEEEECChHhcCCCCC----
Confidence            899999999999863  34466889999999999999999999999999865     5689999999877765433    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            ...|+.+|++++++++.++.
T Consensus       156 ------~~~Y~~sK~a~~~l~~~~~~  175 (274)
T PRK07775        156 ------MGAYGAAKAGLEAMVTNLQM  175 (274)
T ss_pred             ------cchHHHHHHHHHHHHHHHHH
Confidence                  33799999999999998864

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-25  Score=183.74  Aligned_cols=157  Identities=25%  Similarity=0.334  Sum_probs=135.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |++|||||++|||.+++++|+++|++|++++|+.+..+..    ..    ..+.++.+|++++++++++++++.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999987654332    21    236688999999999999999999999999


Q ss_pred             cEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |++|||||..  ++..+.+.+++++.+++|+.+++.+++.++|.|.+      ..|+||++||..+..+.+..       
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------~~g~iv~isS~~~~~~~~~~-------  140 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR------SRGLVVNIGSVSGVLVTPFA-------  140 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh------cCCEEEEECCccccCCCCCc-------
Confidence            9999999975  34557789999999999999999999999999976      35899999999887765443       


Q ss_pred             CCCccchHHHHHHHHHHHHHHhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ..|+.||++++++++.++..
T Consensus       141 ---~~Y~~sK~al~~~~~~l~~e  160 (274)
T PRK05693        141 ---GAYCASKAAVHALSDALRLE  160 (274)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHH
Confidence               37999999999999887653

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.94  E-value=9.6e-26  Score=173.79  Aligned_cols=172  Identities=30%  Similarity=0.381  Sum_probs=134.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEE-EcCCcchHHHHHHHHhh-cCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMG-VRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..|.++||||++|||+.++|+|+.. |-++++. .|+.+++   .+++... ....+++++++|++++++++++++++.+
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~   78 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEK   78 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHh
Confidence            4566999999999999999999865 4565555 4556664   2222221 1257899999999999999999999988


Q ss_pred             h--cCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc------CCCCcEEEEEcCCcc
Q 027991          107 Q--HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGH  175 (216)
Q Consensus       107 ~--~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~isS~~~  175 (216)
                      -  ..++|+||||||+..   ...+.+.+.|.+.+++|..+++.++|.++|++++...+      ....+.|||+||.++
T Consensus        79 iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~  158 (249)
T KOG1611|consen   79 IVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG  158 (249)
T ss_pred             hcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence            7  568999999999974   34456788899999999999999999999999986422      112347999999888


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .++.-       ...+..+|++||+|++++++.+..
T Consensus       159 s~~~~-------~~~~~~AYrmSKaAlN~f~ksls~  187 (249)
T KOG1611|consen  159 SIGGF-------RPGGLSAYRMSKAALNMFAKSLSV  187 (249)
T ss_pred             ccCCC-------CCcchhhhHhhHHHHHHHHHHhhh
Confidence            75421       233455999999999999998865

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-25  Score=181.91  Aligned_cols=162  Identities=27%  Similarity=0.265  Sum_probs=136.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++     .  ..++++|++++++++++++++.+.+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999876554443332     1  1578999999999999999999889


Q ss_pred             CCccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          109 HQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       109 ~~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +++|++|||||...    +..+.+.+.+++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.+.   
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~~sS~~~~~g~~~---  149 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-----GKGSIINTASFVAVMGSAT---  149 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-----CCcEEEEEcchhhccCCCC---
Confidence            99999999999753    23456788999999999999999999999999875     5789999999877765421   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            ....|+.+|+++.++++.+..
T Consensus       150 ------~~~~Y~~sKaal~~~~~~l~~  170 (255)
T PRK06057        150 ------SQISYTASKGGVLAMSRELGV  170 (255)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHH
Confidence                  223799999999999887764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.3e-25  Score=180.44  Aligned_cols=165  Identities=18%  Similarity=0.197  Sum_probs=132.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC----cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI----AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .+++|+++||||++|||.++++.|+++|++|+++.++.    +..++..+++...  +.++.++++|+++++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence            46789999999999999999999999999977766543    2333444444333  45788999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEE-cCCccccccc
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINV-SSEGHRLAYH  180 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~i-sS~~~~~~~~  180 (216)
                      +.+.++++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|.+       .|+|+++ ||..+.. .+
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~~~iv~~~ss~~~~~-~~  154 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-------NGKIVTLVTSLLGAF-TP  154 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-------CCCEEEEecchhccc-CC
Confidence            9999999999999999853  4456788999999999999999999999999864       4677776 5544432 12


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ....|+.||+++++|++.++..
T Consensus       155 ----------~~~~Y~~sK~a~~~~~~~la~e  176 (257)
T PRK12744        155 ----------FYSAYAGSKAPVEHFTRAASKE  176 (257)
T ss_pred             ----------CcccchhhHHHHHHHHHHHHHH
Confidence                      2347999999999999998754

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=1.9e-25  Score=179.86  Aligned_cols=169  Identities=22%  Similarity=0.210  Sum_probs=144.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC--CHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~~~~~~~~~  104 (216)
                      ..+++|+++||||+++||.+++++|+++|++|++++|+.++.+...+++.... ..++.++.+|++  ++++++++++.+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999877777666665442 346677788886  789999999999


Q ss_pred             HhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          105 NIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      .+.++++|++|||||...   +..+.+.+++++.+++|+.+++.+++.+++.|.++     +.++||++||..+..+.++
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-----~~~~iv~~ss~~~~~~~~~  161 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-----PAASLVFTSSSVGRQGRAN  161 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----CCCEEEEEccHhhcCCCCC
Confidence            999999999999999753   34567889999999999999999999999999876     5789999999888776544


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .          ..|+.||++.+.+++.++.
T Consensus       162 ~----------~~Y~~sK~a~~~~~~~~~~  181 (247)
T PRK08945        162 W----------GAYAVSKFATEGMMQVLAD  181 (247)
T ss_pred             C----------cccHHHHHHHHHHHHHHHH
Confidence            3          3799999999999988765

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.8e-25  Score=178.71  Aligned_cols=168  Identities=27%  Similarity=0.304  Sum_probs=137.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC-CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|++|||||+++||.+++++|+++|++|++++++ .+..++..+++...  +.++.++++|++|.+++.++++++.+.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999888754 34444444545433  45678899999999999999999999999


Q ss_pred             CccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          110 QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       110 ~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      ++|++|||||...   +..+.+.+++++.+++|+.+++.+++.+++.|.++.  .+.+|+||++||..+..+.++.    
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~~----  153 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRH--GGRGGAIVNVSSMAARLGSPGE----  153 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCCCeEEEEECchhhcCCCCCC----
Confidence            9999999999863   344678899999999999999999999999997641  1125799999999888765432    


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                           ...|+.+|++++++++.++.
T Consensus       154 -----~~~Y~~sKaa~~~~~~~la~  173 (248)
T PRK06123        154 -----YIDYAASKGAIDTMTIGLAK  173 (248)
T ss_pred             -----ccchHHHHHHHHHHHHHHHH
Confidence                 12599999999999988765

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.3e-25  Score=179.55  Aligned_cols=168  Identities=26%  Similarity=0.324  Sum_probs=143.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|+++||||+++||..++++|+++|++ |++++|+.+..+...+++...  +.++.++.+|+++++++.++++.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            478899999999999999999999999998 999999877766666666433  56788899999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||+|...  +..+.+.++++.++++|+.+++.+++.+++.|.++    ...|+||++||..+..+.++   
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~~ss~~~~~~~~~---  153 (260)
T PRK06198         81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR----KAEGTIVNIGSMSAHGGQPF---  153 (260)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCCEEEEECCcccccCCCC---
Confidence            9999999999999863  34467889999999999999999999999999764    12589999999887665443   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ...|+.+|++++++++.++.
T Consensus       154 -------~~~Y~~sK~a~~~~~~~~a~  173 (260)
T PRK06198        154 -------LAAYCASKGALATLTRNAAY  173 (260)
T ss_pred             -------cchhHHHHHHHHHHHHHHHH
Confidence                   34799999999999998765

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.94  E-value=4.4e-25  Score=177.02  Aligned_cols=164  Identities=27%  Similarity=0.252  Sum_probs=137.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      |+++||||+++||.++++.|+++|++|++++|+.+ ..++..+....  .+.++.++++|+++.++++++++++.+.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999854 12222222211  2456889999999999999999999999999


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||+|...  +..+.+.+++++++++|+.+++.+++.+++.|+++     +.++||++||..+..+.++.      
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~iss~~~~~~~~~~------  149 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-----GYGRIINISSVNGLKGQFGQ------  149 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----CCeEEEEECChhhccCCCCC------
Confidence            999999999863  34567899999999999999999999999999875     57899999998887665443      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ..|+.+|++++++++.+...
T Consensus       150 ----~~Y~~sK~a~~~~~~~l~~~  169 (245)
T PRK12824        150 ----TNYSAAKAGMIGFTKALASE  169 (245)
T ss_pred             ----hHHHHHHHHHHHHHHHHHHH
Confidence                37999999999999888653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.94  E-value=5.1e-25  Score=177.14  Aligned_cols=167  Identities=27%  Similarity=0.311  Sum_probs=143.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++.+|+++||||+++||.+++++|+++|++|++++|+.++..+..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999987777766666544  456889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc-ccccCCcc
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~  184 (216)
                      ++.+|++||++|...  +..+.+.+++++.+++|+.+++.+++.+++.|.++     +.++||++||..+. .+.++   
T Consensus        81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~ss~~~~~~~~~~---  152 (251)
T PRK12826         81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-----GGGRIVLTSSVAGPRVGYPG---  152 (251)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEechHhhccCCCC---
Confidence            999999999999864  34467889999999999999999999999999875     56899999998776 43322   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ...|+.+|++.+++++.+..
T Consensus       153 -------~~~y~~sK~a~~~~~~~~~~  172 (251)
T PRK12826        153 -------LAHYAASKAGLVGFTRALAL  172 (251)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHH
Confidence                   34799999999999988764

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.5e-25  Score=182.30  Aligned_cols=164  Identities=20%  Similarity=0.198  Sum_probs=131.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|+++|||+ +|||.+++++|+ +|++|++++|+.+++++..+++...  +.++.++++|++|++++.++++++ +++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            578999998 699999999996 8999999999987777776666543  457889999999999999999988 56899


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-C--------
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-E--------  181 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~--------  181 (216)
                      +|++|||||+..     ..+++++++++|+.+++.+++.++|.|.+       +|++|++||.++..+.. .        
T Consensus        77 id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~~~~~~~~~~~~~  144 (275)
T PRK06940         77 VTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP-------GGAGVVIASQSGHRLPALTAEQERALA  144 (275)
T ss_pred             CCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh-------CCCEEEEEecccccCcccchhhhcccc
Confidence            999999999852     34678999999999999999999999964       47889999988876420 0        


Q ss_pred             C--------ccCCCC---CCCCccchHHHHHHHHHHHHHHh
Q 027991          182 G--------IRFDKI---NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       182 ~--------~~~~~~---~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .        .++...   ......|+.||+++.++++.++.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~  185 (275)
T PRK06940        145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAV  185 (275)
T ss_pred             ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHH
Confidence            0        000000   02345899999999999998865

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.7e-25  Score=179.06  Aligned_cols=164  Identities=24%  Similarity=0.269  Sum_probs=141.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++++|||||+||||.++++.|+++|++|++++|+.++.++..+.+...  +.++.++.+|++|++++.++++++.+.+++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999987777766666554  457888999999999999999999999999


Q ss_pred             ccEEEECCccCC--CCCCC-ChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          111 LNILINNAGIMG--TPFML-SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      +|++|||||...  +..+. +.+++.+.+++|+.+++.+++.+++.|.++      .++||++||..+..+.++      
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~------  146 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS------RGQIVVVSSLAGLTGVPT------  146 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCEEEEEecccccCCCCC------
Confidence            999999999863  34455 788899999999999999999999998763      689999999888776443      


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ...|+.+|++++++++.++..
T Consensus       147 ----~~~Y~~sK~~~~~~~~~l~~~  167 (263)
T PRK06181        147 ----RSGYAASKHALHGFFDSLRIE  167 (263)
T ss_pred             ----ccHHHHHHHHHHHHHHHHHHH
Confidence                348999999999999887653

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.6e-25  Score=178.16  Aligned_cols=165  Identities=29%  Similarity=0.336  Sum_probs=138.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++++++||||+||||.+++++|+++|++|++. .|+.++.++..+++...  +.++.++++|++|++++.++++++.++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            668999999999999999999999999998775 67766666655555432  456889999999999999999999887


Q ss_pred             c------CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          108 H------HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       108 ~------~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +      +++|++|||||...  +..+.+.+.+++.+++|+.+++++++.+++.|.+       .|++|++||..+..+.
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~v~~sS~~~~~~~  154 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-------EGRVINISSAEVRLGF  154 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECCHHhcCCC
Confidence            6      57999999999863  3456788899999999999999999999999864       4799999998887664


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++.          ..|+.||++.+++++.+...
T Consensus       155 ~~~----------~~Y~~sK~a~~~~~~~~~~~  177 (254)
T PRK12746        155 TGS----------IAYGLSKGALNTMTLPLAKH  177 (254)
T ss_pred             CCC----------cchHhhHHHHHHHHHHHHHH
Confidence            443          37999999999999888754

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.94  E-value=6.9e-25  Score=176.85  Aligned_cols=164  Identities=34%  Similarity=0.445  Sum_probs=139.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc--hHHHHHHHHhhcCC-CeEEEEEccCCC-HHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPS-AKVDAMELDLSS-LASVRNFASE  103 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~-~~~~~~~~Dv~~-~~~~~~~~~~  103 (216)
                      ++.+|+++||||++|||+++|+.|+++|++|+++.++.+.  .+...+...  ..+ ..+.+..+|+++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999888887664  333333333  112 368888899998 9999999999


Q ss_pred             HHhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          104 YNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +.+.+|++|++|||||+..   +..+.+.++|++++++|+.+++.+++.+.|.+.+      .  +||++||..+. +.+
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~------~--~Iv~isS~~~~-~~~  150 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK------Q--RIVNISSVAGL-GGP  150 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh------C--eEEEECCchhc-CCC
Confidence            9999999999999999973   5678889999999999999999999988888883      2  99999999988 655


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +.         ...|+.||+++.+|++.++.
T Consensus       151 ~~---------~~~Y~~sK~al~~~~~~l~~  172 (251)
T COG1028         151 PG---------QAAYAASKAALIGLTKALAL  172 (251)
T ss_pred             CC---------cchHHHHHHHHHHHHHHHHH
Confidence            54         34899999999999998873

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.94  E-value=7.6e-25  Score=175.36  Aligned_cols=165  Identities=24%  Similarity=0.257  Sum_probs=139.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      |++|||||++|||.+++++|+++|++|+++.| +.+..++..+++...  +.++.++.+|++|++++.++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999988 444444444444332  457889999999999999999999999999


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||||...  +..+.+.+++.+.+++|+.+++.+++.+++.|.+.     +.++||++||..+..+.++.      
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~iss~~~~~~~~~~------  147 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-----GWGRIINISSVNGQKGQFGQ------  147 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcCCCCCc------
Confidence            999999999863  34567889999999999999999999999999875     56899999998887765443      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                          ..|+.+|++++.+++.++...
T Consensus       148 ----~~y~~sk~a~~~~~~~la~~~  168 (242)
T TIGR01829       148 ----TNYSAAKAGMIGFTKALAQEG  168 (242)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHh
Confidence                379999999999999887643

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=5.9e-25  Score=177.63  Aligned_cols=169  Identities=22%  Similarity=0.237  Sum_probs=139.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||||+++||.+++++|+++|++|++++|+.. ..+...+.+...  +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999998753 334444444332  45788999999999999999999999999


Q ss_pred             CccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccC-CCCcEEEEEcCCcccccccCCcc
Q 027991          110 QLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKS-GGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       110 ~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++|++|||||...    +..+.+.+++++.+++|+.+++.+++.+.+.|.++.... ...++||++||..+..+.++.  
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  157 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNR--  157 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCC--
Confidence            9999999999753    344678899999999999999999999999998752111 114689999999888765433  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              ..|+.+|++++++++.+..
T Consensus       158 --------~~Y~~sK~a~~~~~~~l~~  176 (256)
T PRK12745        158 --------GEYCISKAGLSMAAQLFAA  176 (256)
T ss_pred             --------cccHHHHHHHHHHHHHHHH
Confidence                    3799999999999998864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.94  E-value=3.7e-25  Score=180.34  Aligned_cols=170  Identities=18%  Similarity=0.160  Sum_probs=131.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC-CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHH----HHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASV----RNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~----~~~~~~~~~  106 (216)
                      ++++||||++|||++++++|+++|++|++++|+ .++++...+++.... +.++.++.+|++|++++    +++++++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            579999999999999999999999999998754 455666666664433 34567799999999855    566777777


Q ss_pred             hcCCccEEEECCccCC--CCCCCCh-----------HHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCcEEEEEcC
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSK-----------DNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSS  172 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~isS  172 (216)
                      .++++|+||||||...  +..+.+.           +++.+++++|+.+++.+++.++|.|.++... ....++||+++|
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            8899999999999753  2222222           3588999999999999999999998653111 123578999999


Q ss_pred             CcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          173 EGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+..+.++..          .|+.||+++++|++.++..
T Consensus       161 ~~~~~~~~~~~----------~Y~asK~a~~~~~~~la~e  190 (267)
T TIGR02685       161 AMTDQPLLGFT----------MYTMAKHALEGLTRSAALE  190 (267)
T ss_pred             hhccCCCcccc----------hhHHHHHHHHHHHHHHHHH
Confidence            88876544433          8999999999999998653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.3e-25  Score=201.35  Aligned_cols=170  Identities=25%  Similarity=0.223  Sum_probs=146.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++++|++|+++++++++++.
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  443 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDIL  443 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999988887777777554  4578899999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC--CCCC--ChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          106 IQHHQLNILINNAGIMGT--PFML--SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~--~~~~--~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.++++|++|||||....  ..+.  ..+++++++++|+.+++.+++.++|.|.++     +.|+||++||.++..+.++
T Consensus       444 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~  518 (657)
T PRK07201        444 AEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-----RFGHVVNVSSIGVQTNAPR  518 (657)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCEEEEECChhhcCCCCC
Confidence            999999999999997522  2222  257899999999999999999999999876     5789999999988776444


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||++++++++.++..
T Consensus       519 ~----------~~Y~~sK~a~~~~~~~la~e  539 (657)
T PRK07201        519 F----------SAYVASKAALDAFSDVAASE  539 (657)
T ss_pred             c----------chHHHHHHHHHHHHHHHHHH
Confidence            3          37999999999999988753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=1.1e-24  Score=175.33  Aligned_cols=168  Identities=21%  Similarity=0.203  Sum_probs=141.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++++++||||++|||..+++.|+++|++|++++|+.++.++..+++...  +.++.++++|++++++++++++++.+.
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999988777777766544  557888999999999999999999888


Q ss_pred             cCCccEEEECCccCCCC-----------CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          108 HHQLNILINNAGIMGTP-----------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~-----------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      ++++|++|||||...+.           .+.+.+++..++++|+.+++.+++.+++.|.++.    ..|.||++||.. .
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~----~~~~iv~~ss~~-~  154 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESG----SKGVIINISSIA-R  154 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCeEEEEEcccc-c
Confidence            89999999999975321           4567889999999999999999999999997641    357899998864 3


Q ss_pred             ccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          177 LAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+.+          +...|+.||++++++++.++..
T Consensus       155 ~~~~----------~~~~Y~~sK~a~~~l~~~la~~  180 (253)
T PRK08217        155 AGNM----------GQTNYSASKAGVAAMTVTWAKE  180 (253)
T ss_pred             cCCC----------CCchhHHHHHHHHHHHHHHHHH
Confidence            3332          2347999999999999988754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.94  E-value=7e-25  Score=176.50  Aligned_cols=168  Identities=26%  Similarity=0.300  Sum_probs=138.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEE-cCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      |+++||||++|||..+++.|+++|++|+++. |+.+..+...+++...  +.++.+++||+++.++++++++++.+.+++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999998875 5555556665555432  457899999999999999999999988999


Q ss_pred             ccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          111 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       111 id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      +|++|||||...   +..+.+.++++..+++|+.+++.+++.+++.|.++.  .++.|+||++||..+..+.+..     
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~~~ii~~sS~~~~~~~~~~-----  153 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDR--GGRGGAIVNVSSIASRLGSPNE-----  153 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--CCCCcEEEEECchhhcCCCCCC-----
Confidence            999999999863   345678899999999999999999999999987641  1235789999999888764431     


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ...|+.||+++.++++.++..
T Consensus       154 ----~~~Y~~sK~~~~~~~~~la~~  174 (248)
T PRK06947        154 ----YVDYAGSKGAVDTLTLGLAKE  174 (248)
T ss_pred             ----CcccHhhHHHHHHHHHHHHHH
Confidence                136999999999999888653

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.3e-25  Score=175.45  Aligned_cols=162  Identities=23%  Similarity=0.267  Sum_probs=138.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+++||||++|||.+++++|+++|++|++++|+.++.++..+++... ++.++.++++|++++++++++++++.+   .+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            68999999999999999999999999999999988777766666544 356899999999999999999998764   46


Q ss_pred             cEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |++|||+|...  +..+.+.+++.+.+++|+.+++.+++.+.|.|.++     +.++||++||..+..+.++.       
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~-------  145 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-----GSGTIVGISSVAGDRGRASN-------  145 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecccccCCCCCC-------
Confidence            99999999753  34467889999999999999999999999999875     57899999998887764433       


Q ss_pred             CCCccchHHHHHHHHHHHHHHhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ..|+.+|+++.++++.++..
T Consensus       146 ---~~Y~~sK~a~~~~~~~l~~e  165 (243)
T PRK07102        146 ---YVYGSAKAALTAFLSGLRNR  165 (243)
T ss_pred             ---cccHHHHHHHHHHHHHHHHH
Confidence               37999999999999988653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.94  E-value=6.9e-25  Score=175.60  Aligned_cols=162  Identities=20%  Similarity=0.262  Sum_probs=135.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++||||++|||.+++++|+++|++|++++|+. +..+...+++...  +.++.++++|+++.+++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999988754 4455555655544  45789999999999999999999989999999


Q ss_pred             EEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHH-HHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          113 ILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLL-DTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       113 ~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      ++|||+|...  +..+.+.++|+.++++|+.+++.+++.++ |.+.++     +.|+||++||..+..+.++..      
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~~~~------  147 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-----QGGRIITLASVSGVMGNRGQV------  147 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-----CCeEEEEEcchhhccCCCCCc------
Confidence            9999999863  34467889999999999999999999875 555543     468999999999888765443      


Q ss_pred             CCCccchHHHHHHHHHHHHHHhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          .|+.+|+++.++++.++..
T Consensus       148 ----~Y~~sK~a~~~~~~~la~e  166 (239)
T TIGR01831       148 ----NYSAAKAGLIGATKALAVE  166 (239)
T ss_pred             ----chHHHHHHHHHHHHHHHHH
Confidence                7999999999999988654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=9.5e-25  Score=175.19  Aligned_cols=168  Identities=29%  Similarity=0.301  Sum_probs=144.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++.+|++|||||+++||.++++.|+++|++|+++ +|+.+..+...+.+...  +.++.++.+|++|++++.++++++.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3668899999999999999999999999999999 88877776666666543  45788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++||++|...  +..+.+.+++++.+++|+.+++.+++.+++.+.++     +.+++|++||..+..+.+..  
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~~~~~~--  152 (247)
T PRK05565         80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-----KSGVIVNISSIWGLIGASCE--  152 (247)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHhhccCCCCc--
Confidence            9999999999999862  34467889999999999999999999999999875     56899999998887765443  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.+|++++.+++.+...
T Consensus       153 --------~~y~~sK~a~~~~~~~~~~~  172 (247)
T PRK05565        153 --------VLYSASKGAVNAFTKALAKE  172 (247)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHH
Confidence                    37999999999998887654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=9.2e-27  Score=172.70  Aligned_cols=164  Identities=24%  Similarity=0.284  Sum_probs=140.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++.|+++++||+.-|||+++++.|+..|++|+.+.|+++.++....    +.| .-+.-++.|+++++.+.+++..+ 
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~----e~p-~~I~Pi~~Dls~wea~~~~l~~v-   75 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVK----ETP-SLIIPIVGDLSAWEALFKLLVPV-   75 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHh----hCC-cceeeeEecccHHHHHHHhhccc-
Confidence            466889999999999999999999999999999999999877665544    332 34888999999988888776654 


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                         +.+|.+|||||+.  +|+.+.+.++++..|++|+.+++++.|...+-+..+    ..+|.||++||.++..+..++.
T Consensus        76 ---~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R----~~~GaIVNvSSqas~R~~~nHt  148 (245)
T KOG1207|consen   76 ---FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDR----QIKGAIVNVSSQASIRPLDNHT  148 (245)
T ss_pred             ---CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhc----cCCceEEEecchhcccccCCce
Confidence               5899999999985  788899999999999999999999999988877654    2578899999999998755544


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                .|+++|+++.|+++.++..
T Consensus       149 ----------vYcatKaALDmlTk~lAlE  167 (245)
T KOG1207|consen  149 ----------VYCATKAALDMLTKCLALE  167 (245)
T ss_pred             ----------EEeecHHHHHHHHHHHHHh
Confidence                      8999999999999998764

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.94  E-value=1.1e-25  Score=181.35  Aligned_cols=165  Identities=27%  Similarity=0.273  Sum_probs=142.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++||||+.|||++.|++|+++|.+|++++|++++++.+..|+.+.++ ..+.++.+|+++++.+.+.+.+..++ .
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~~-~  125 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLAG-L  125 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhcC-C
Confidence            358999999999999999999999999999999999999999999999985 88999999999887744444433222 2


Q ss_pred             CccEEEECCccCCC----CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          110 QLNILINNAGIMGT----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       110 ~id~li~~Ag~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      .|-+||||+|...+    +.+.+...+++.+++|..++..+++.++|.|.++     ++|-|||++|.+|..|.|.+.  
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-----~~G~IvnigS~ag~~p~p~~s--  198 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-----KKGIIVNIGSFAGLIPTPLLS--  198 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-----CCceEEEeccccccccChhHH--
Confidence            67799999999752    2355666889999999999999999999999986     799999999999999988877  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              .|++||+.+..+++.+..
T Consensus       199 --------~ysasK~~v~~~S~~L~~  216 (312)
T KOG1014|consen  199 --------VYSASKAFVDFFSRCLQK  216 (312)
T ss_pred             --------HHHHHHHHHHHHHHHHHH
Confidence                    889999999999888765

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=173.16  Aligned_cols=164  Identities=24%  Similarity=0.316  Sum_probs=140.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +.+++++||||+|+||.+++++|+++|++|++++|+.++.++..+++...   .++.++++|+++.+++.++++++.+.+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999987776666666432   568899999999999999999999999


Q ss_pred             CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|++||++|...  +..+.+.+++.+.+++|+.+++.+++++++.|.+      ..|+||++||..+..+.++     
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~iv~~ss~~~~~~~~~-----  149 (237)
T PRK07326         81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR------GGGYIINISSLAGTNFFAG-----  149 (237)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH------CCeEEEEECChhhccCCCC-----
Confidence            99999999999753  4456789999999999999999999999999943      4689999999877654332     


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                           ...|+.+|++..++++.+..
T Consensus       150 -----~~~y~~sk~a~~~~~~~~~~  169 (237)
T PRK07326        150 -----GAAYNASKFGLVGFSEAAML  169 (237)
T ss_pred             -----CchHHHHHHHHHHHHHHHHH
Confidence                 34799999999999998753

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.93  E-value=2.4e-25  Score=178.87  Aligned_cols=156  Identities=33%  Similarity=0.369  Sum_probs=137.9

Q ss_pred             CCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc-CCccEE
Q 027991           38 GAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQLNIL  114 (216)
Q Consensus        38 G~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~id~l  114 (216)
                      |++  +|||.++|+.|+++|++|++++|+.++.++..+++..+++ .+  ++++|++++++++++++++.+.+ |++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  9999999999999999999999999988888888888875 33  59999999999999999999999 999999


Q ss_pred             EECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          115 INNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       115 i~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      |||+|...      +..+.+.++|.+.+++|+.+++.++|.++|+|.+       .|+||++||..+..+.+++.     
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~gsii~iss~~~~~~~~~~~-----  145 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-------GGSIINISSIAAQRPMPGYS-----  145 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------EEEEEEEEEGGGTSBSTTTH-----
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCCcccccchhhcccCccch-----
Confidence            99999864      3346688999999999999999999999998876       58999999998887755544     


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                           .|+.+|+++++|++.++...
T Consensus       146 -----~y~~sKaal~~l~r~lA~el  165 (241)
T PF13561_consen  146 -----AYSASKAALEGLTRSLAKEL  165 (241)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhHHHHHHHHHHHHHHHHHh
Confidence                 89999999999999987643

...

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.4e-24  Score=173.07  Aligned_cols=168  Identities=23%  Similarity=0.236  Sum_probs=138.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc----chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .+++++++||||++|||.+++++|+++|++|++++|...    ..++..+++...  +.++.++.+|++|.+++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            356789999999999999999999999999999776433    333333344332  45788999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHH-HHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLL-DTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +.+.++++|++|||||...  +..+.+.+++.+.+++|+.+++.+++.+. +.+.++     ..++||++||..+..+.+
T Consensus        81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~  155 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-----RGGRIVNIASVAGVRGNR  155 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-----CCeEEEEECCchhcCCCC
Confidence            9998899999999999864  44567889999999999999999999999 666554     457999999988887644


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.+|++++++++.+...
T Consensus       156 ~~----------~~y~~sK~a~~~~~~~l~~~  177 (249)
T PRK12827        156 GQ----------VNYAASKAGLIGLTKTLANE  177 (249)
T ss_pred             CC----------chhHHHHHHHHHHHHHHHHH
Confidence            33          37999999999998887653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=2.7e-24  Score=173.30  Aligned_cols=166  Identities=19%  Similarity=0.196  Sum_probs=137.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++++|||||+++||.+++++|+++|++|++..++. +...+....+...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999998877543 3334444444332  44677899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.+.|.|.+       .|+||++||..+..+.++   
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~---  150 (252)
T PRK06077         81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-------GGAIVNIASVAGIRPAYG---  150 (252)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-------CcEEEEEcchhccCCCCC---
Confidence            999999999999985  34456678889999999999999999999999864       479999999888765444   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.||++.+++++.++..
T Consensus       151 -------~~~Y~~sK~~~~~~~~~l~~~  171 (252)
T PRK06077        151 -------LSIYGAMKAAVINLTKYLALE  171 (252)
T ss_pred             -------chHHHHHHHHHHHHHHHHHHH
Confidence                   348999999999999887653

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=6.5e-25  Score=176.78  Aligned_cols=166  Identities=24%  Similarity=0.193  Sum_probs=150.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++++|||||+|||+++|.++..+|++|.++.|+.+++.+++.++.....-..+.+..+|+.|.+++...++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999998877544457799999999999999999999999999


Q ss_pred             cEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |.+|||||..  +.+.+.+.++++..+++|++++++++++.++.|++.    .+.|+|+++||..+..|.+++.      
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~----~~~g~I~~vsS~~a~~~i~Gys------  183 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKR----EHLGRIILVSSQLAMLGIYGYS------  183 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcc----ccCcEEEEehhhhhhcCccccc------
Confidence            9999999986  556788999999999999999999999999999975    1356999999999999988877      


Q ss_pred             CCCccchHHHHHHHHHHHHHHh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          +|..+|.++.+|...++.
T Consensus       184 ----aYs~sK~alrgLa~~l~q  201 (331)
T KOG1210|consen  184 ----AYSPSKFALRGLAEALRQ  201 (331)
T ss_pred             ----ccccHHHHHHHHHHHHHH
Confidence                778889988888887764

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.3e-24  Score=172.01  Aligned_cols=167  Identities=23%  Similarity=0.217  Sum_probs=141.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||+++||..++++|+++|++|++++|+.++..+..+++..    ....++.+|++|.++++++++++.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHHH
Confidence            457799999999999999999999999999999999998766655555432    3456788999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++||++|...  +..+.+.+++.+.+++|+.+++.+++.+++.+.++     +.++||++||..+..+.+    
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~----  149 (239)
T PRK12828         79 QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-----GGGRIVNIGAGAALKAGP----  149 (239)
T ss_pred             HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-----CCCEEEEECchHhccCCC----
Confidence            9999999999999753  33456888999999999999999999999999875     578999999988776543    


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ....|+.+|++..++++.+...
T Consensus       150 ------~~~~y~~sk~a~~~~~~~~a~~  171 (239)
T PRK12828        150 ------GMGAYAAAKAGVARLTEALAAE  171 (239)
T ss_pred             ------CcchhHHHHHHHHHHHHHHHHH
Confidence                  2347999999999998877653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=5.8e-24  Score=170.47  Aligned_cols=168  Identities=29%  Similarity=0.315  Sum_probs=141.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|+++||||+|+||.+++++|+++|++|+++.|+... .+...+++...  +.++.++.+|+++++++.++++++.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888877543 44444545433  56788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++||+||...  +..+.+.+.+++.+++|+.+++.+.+.+.+.+.+.     +.+++|++||..+..+.++   
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~iss~~~~~~~~~---  151 (248)
T PRK05557         80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-----RSGRIINISSVVGLMGNPG---  151 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEEcccccCcCCCC---
Confidence            9999999999999863  33466888999999999999999999999999864     4578999999988776544   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.+|++++.+++.++..
T Consensus       152 -------~~~y~~sk~a~~~~~~~~a~~  172 (248)
T PRK05557        152 -------QANYAASKAGVIGFTKSLARE  172 (248)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHH
Confidence                   337999999999999887653

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=4.8e-24  Score=170.72  Aligned_cols=168  Identities=26%  Similarity=0.297  Sum_probs=143.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +|.+|++|||||+++||..+++.|+++|++|++++|+.++.+...+++...  +.++.++.+|++|++++.++++++...
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999987776666665543  567889999999999999999999888


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++||++|...  +..+.+.+++.+.++.|+.+++.+++.+.++|.+.     +.++||++||..+..+.+     
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~~ss~~~~~~~~-----  149 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-----RYGRIVNISSVSGVTGNP-----  149 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECcHHhccCCC-----
Confidence            899999999999863  34466888999999999999999999999999765     457999999987766432     


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           +...|+.+|++++.+++.+...
T Consensus       150 -----~~~~y~~sk~~~~~~~~~l~~~  171 (246)
T PRK05653        150 -----GQTNYSAAKAGVIGFTKALALE  171 (246)
T ss_pred             -----CCcHhHhHHHHHHHHHHHHHHH
Confidence                 3347999999999999887653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.93  E-value=4.3e-24  Score=171.51  Aligned_cols=167  Identities=29%  Similarity=0.341  Sum_probs=138.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      |+++||||+|+||.+++++|+++|++|++. .|+.+..++...++...  +.++.++++|++|+++++++++++.+.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999875 56666556555555433  456888999999999999999999999999


Q ss_pred             ccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          111 LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       111 id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      +|++|||||...   +..+.+.++++..+++|+.+++.+++.+++.|.++.  ...+|+||++||..+..+.++.     
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~g~~v~~sS~~~~~~~~~~-----  152 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKH--GGSGGAIVNVSSAASRLGAPGE-----  152 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CCCCcEEEEECchhhccCCCCc-----
Confidence            999999999752   345678899999999999999999999999998641  1235789999999888765431     


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          ...|+.+|++.+++++.++.
T Consensus       153 ----~~~Y~~sK~~~~~~~~~l~~  172 (247)
T PRK09730        153 ----YVDYAASKGAIDTLTTGLSL  172 (247)
T ss_pred             ----ccchHhHHHHHHHHHHHHHH
Confidence                12599999999999988764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=2e-24  Score=172.51  Aligned_cols=153  Identities=28%  Similarity=0.265  Sum_probs=127.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||++|||.++++.|+++|++|++++|+.....           ..++.++.+|++++      ++++.+.
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----------~~~~~~~~~D~~~~------~~~~~~~   64 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-----------SGNFHFLQLDLSDD------LEPLFDW   64 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-----------CCcEEEEECChHHH------HHHHHHh
Confidence            367899999999999999999999999999999998854310           24578899999987      4444455


Q ss_pred             cCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|++|||||..   .+..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.. 
T Consensus        65 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~-  138 (235)
T PRK06550         65 VPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-----KSGIIINMCSIASFVAGGGGA-  138 (235)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhccCCCCCc-
Confidence            67999999999975   345677899999999999999999999999999875     568999999998887654433 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+.+|++++++++.++..
T Consensus       139 ---------~Y~~sK~a~~~~~~~la~~  157 (235)
T PRK06550        139 ---------AYTASKHALAGFTKQLALD  157 (235)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHH
Confidence                     7999999999999887753

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=6.6e-24  Score=170.51  Aligned_cols=167  Identities=19%  Similarity=0.230  Sum_probs=136.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +.++++|||||+++||..++++|+++|++|++++|+.+ ..+.....+.... ...+.++.+|++|.+++.++++++.+.
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999998743 3444444443322 345888999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||...  +..+.+.+++++++++|+.+++.+++++.|.+.++      .|.+++++|..+..+       
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~-------  149 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ------RGAIVNITDIHAERP-------  149 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC------CeEEEEEeChhhcCC-------
Confidence            999999999999753  34456788899999999999999999999998763      578888887555433       


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ..+...|+.||++.+.+++.++..
T Consensus       150 ---~~~~~~Y~~sK~~~~~~~~~l~~~  173 (249)
T PRK09135        150 ---LKGYPVYCAAKAALEMLTRSLALE  173 (249)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHH
Confidence               234458999999999999987653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=6.5e-24  Score=171.22  Aligned_cols=164  Identities=27%  Similarity=0.300  Sum_probs=140.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||+++||.+++++|+++|++|++++|+.+..+...+++...  +.++.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999987776666665433  457889999999999999999999988899


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++||+||...  +..+.+.+++++.+.+|+.+++.+++.+++.|++.     ..+++|++||..+..+.+..      
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~~v~~ss~~~~~~~~~~------  147 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-----GWGRIINIASAHGLVASPFK------  147 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCeEEEEEcchhhcCCCCCC------
Confidence            999999999864  23456788899999999999999999999999875     46799999998777664433      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          ..|+.+|++.+++++.+..
T Consensus       148 ----~~y~~sk~a~~~~~~~~~~  166 (255)
T TIGR01963       148 ----SAYVAAKHGLIGLTKVLAL  166 (255)
T ss_pred             ----chhHHHHHHHHHHHHHHHH
Confidence                4899999999999987764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.2e-24  Score=170.62  Aligned_cols=148  Identities=16%  Similarity=0.110  Sum_probs=121.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++||||++|||.++++.|+++|++|++++|+.+++++..+++       .+.++++|++|+++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            4899999999999999999999999999999977665544332       246789999999999999887753   699


Q ss_pred             EEEECCccCC----C----CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          113 ILINNAGIMG----T----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       113 ~li~~Ag~~~----~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++|||||...    +    ..+ +.++|++++++|+.+++.++|+++|.|.+       +|+||++||..    .+    
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~----~~----  135 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS-------GGSIISVVPEN----PP----  135 (223)
T ss_pred             EEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCeEEEEecCC----CC----
Confidence            9999998521    1    122 47899999999999999999999999963       58999999864    11    


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ....|+.||+++.+|++.++..
T Consensus       136 ------~~~~Y~asKaal~~~~~~la~e  157 (223)
T PRK05884        136 ------AGSAEAAIKAALSNWTAGQAAV  157 (223)
T ss_pred             ------CccccHHHHHHHHHHHHHHHHH
Confidence                  1247999999999999998764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.2e-24  Score=172.24  Aligned_cols=154  Identities=21%  Similarity=0.218  Sum_probs=128.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++++||||++|||.+++++|+++|++|++++|+.+++++..    ..  ..++.++++|++|+++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH----TQ--SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----Hh--cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            68999999999999999999999999999999876544432    22  24578899999999999999987642   57


Q ss_pred             cEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|.+       +++||++||..+..+.++..      
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~------  139 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-------GHRVVIVGSIASELALPRAE------  139 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCeEEEEechhhccCCCCCc------
Confidence            99999999753  2334688999999999999999999999999963       56899999998887654433      


Q ss_pred             CCCccchHHHHHHHHHHHHHHh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          .|+.+|++++++++.++.
T Consensus       140 ----~Y~asK~a~~~~~~~l~~  157 (240)
T PRK06101        140 ----AYGASKAAVAYFARTLQL  157 (240)
T ss_pred             ----hhhHHHHHHHHHHHHHHH
Confidence                899999999999998864

>PRK12742 oxidoreductase; Provisional

Probab=99.92  E-value=9.6e-24  Score=168.67  Aligned_cols=157  Identities=23%  Similarity=0.270  Sum_probs=125.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+++|++|||||++|||.+++++|+++|++|++++++. +..++    +..+.   ...++.+|++|.+++.+++++   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~----l~~~~---~~~~~~~D~~~~~~~~~~~~~---   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAER----LAQET---GATAVQTDSADRDAVIDVVRK---   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHH----HHHHh---CCeEEecCCCCHHHHHHHHHH---
Confidence            46789999999999999999999999999999887643 33332    22222   245788999999988877753   


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccCCc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~  183 (216)
                       ++++|++|||||..  .+..+.+.++|++.+++|+.+++.+++.+++.|.+       .|+||++||..+.. +.+   
T Consensus        73 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~~---  141 (237)
T PRK12742         73 -SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-------GGRIIIIGSVNGDRMPVA---  141 (237)
T ss_pred             -hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-------CCeEEEEeccccccCCCC---
Confidence             47899999999985  34556788999999999999999999999999863       57999999987642 322   


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ....|+.+|++++++++.++..
T Consensus       142 -------~~~~Y~~sKaa~~~~~~~la~~  163 (237)
T PRK12742        142 -------GMAAYAASKSALQGMARGLARD  163 (237)
T ss_pred             -------CCcchHHhHHHHHHHHHHHHHH
Confidence                   3348999999999999887653

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.92  E-value=8.1e-24  Score=171.05  Aligned_cols=158  Identities=25%  Similarity=0.342  Sum_probs=132.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||+||||.+++++|+++|++|++++|+.+..++..+.....  +.++.++.+|++|++++.++++      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence            578999999999999999999999999999999876665555544433  4468899999999998877654      37


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++|||||..  ++..+.+.++++..+++|+.+++.+++.+++.+.++     +.|+||++||..+..+.++       
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~SS~~~~~~~~~-------  141 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-----GKGKVVFTSSMAGLITGPF-------  141 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEcChhhccCCCC-------
Confidence            99999999986  345677899999999999999999999999999875     4589999999887765443       


Q ss_pred             CCCCccchHHHHHHHHHHHHHHh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                         ...|+.||++++++++.+..
T Consensus       142 ---~~~Y~~sK~a~~~~~~~l~~  161 (257)
T PRK09291        142 ---TGAYCASKHALEAIAEAMHA  161 (257)
T ss_pred             ---cchhHHHHHHHHHHHHHHHH
Confidence               24799999999999987764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=2.5e-23  Score=166.73  Aligned_cols=167  Identities=26%  Similarity=0.317  Sum_probs=138.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +..|++|||||+|+||.+++++|+++|++|++..|+..+ .+...+.+...  +.++.++.+|++|.+++.++++++.+.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            556899999999999999999999999998887766543 33333333332  456889999999999999999999888


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++.+|++||+||...  +..+.+.+++.+.+++|+.+++.+++.+++.+.+.     +.+++|++||..+..+.++    
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~i~~SS~~~~~~~~~----  152 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-----RGGRIVNISSVAGLPGWPG----  152 (249)
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEECccccCCCCCC----
Confidence            899999999999753  33466889999999999999999999999999875     4679999999888765433    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.+|++.+++++.+...
T Consensus       153 ------~~~y~~sK~~~~~~~~~~~~~  173 (249)
T PRK12825        153 ------RSNYAAAKAGLVGLTKALARE  173 (249)
T ss_pred             ------chHHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999888664

>PRK08324 short chain dehydrogenase; Validated

Probab=99.92  E-value=8.4e-24  Score=192.72  Aligned_cols=166  Identities=27%  Similarity=0.346  Sum_probs=145.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.||++|||||+||||.++++.|+++|++|++++|+.+.++...+++...   .++.++.+|++|+++++++++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987776666655432   46889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +|++|++|||||..  .+..+.+.++|+..+++|+.+++.+++.+.+.|+++     + +|+||++||..+..+.++.  
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-----~~~g~iV~vsS~~~~~~~~~~--  568 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ-----GLGGSIVFIASKNAVNPGPNF--  568 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCcEEEEECCccccCCCCCc--
Confidence            99999999999986  345677899999999999999999999999999875     3 4899999998887764443  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              ..|+.||++.+++++.+..
T Consensus       569 --------~~Y~asKaa~~~l~~~la~  587 (681)
T PRK08324        569 --------GAYGAAKAAELHLVRQLAL  587 (681)
T ss_pred             --------HHHHHHHHHHHHHHHHHHH
Confidence                    3899999999999998864

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=169.53  Aligned_cols=162  Identities=23%  Similarity=0.251  Sum_probs=137.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|+++||||+++||.++++.|+++|++|++++|+.++.+...+++    .+.++.++++|++|.+++.++++++.+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL----GDARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999887766555544    2456889999999999999999999999999


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++||++|...  +..+.+.+++...+++|+.+++.+++.+++.+.++     +.++||++||..+..+ .+       
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~-~~-------  144 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-----SRGAVVNIGSVNGMAA-LG-------  144 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhcCC-CC-------
Confidence            999999999863  34467889999999999999999999999999865     5689999999765432 11       


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ...|+.+|++++.+++.++..
T Consensus       145 ---~~~y~~sK~a~~~~~~~~a~~  165 (257)
T PRK07074        145 ---HPAYSAAKAGLIHYTKLLAVE  165 (257)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHH
Confidence               237999999999999998753

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.7e-23  Score=169.75  Aligned_cols=167  Identities=29%  Similarity=0.329  Sum_probs=139.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|++|||||+|+||..++++|+++|++|++++|+.+..+...+...    ..++.++.+|++|++++.++++++.
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   81 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAV   81 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHH
Confidence            344788999999999999999999999999999999998765554433332    3367889999999999999999999


Q ss_pred             hhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCC-cEEEEEcCCcccccccC
Q 027991          106 IQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHE  181 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~  181 (216)
                      +.++++|++||++|...   +..+.+.+++.+++++|+.+++.+++.+++.+.+.     +. ++|+++||.++..+.++
T Consensus        82 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~~vv~~ss~~~~~~~~~  156 (264)
T PRK12829         82 ERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS-----GHGGVIIALSSVAGRLGYPG  156 (264)
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCeEEEEecccccccCCCC
Confidence            99999999999999862   23466889999999999999999999999998764     33 68999999887766544


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .          ..|+.+|++.+++++.+..
T Consensus       157 ~----------~~y~~~K~a~~~~~~~l~~  176 (264)
T PRK12829        157 R----------TPYAASKWAVVGLVKSLAI  176 (264)
T ss_pred             C----------chhHHHHHHHHHHHHHHHH
Confidence            3          2799999999999888764

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=168.76  Aligned_cols=163  Identities=28%  Similarity=0.357  Sum_probs=133.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +..++++++++||||+++||..+++.|+++|++|++++|+.++.++..+..       ...++.+|+++.+++.+++++ 
T Consensus         3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~-   74 (245)
T PRK07060          3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA-   74 (245)
T ss_pred             cccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH-
Confidence            345688999999999999999999999999999999999876554433221       245788999999988887775 


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                         .+++|++|||||...  +..+.+.+++++.+++|+.+++.+++.+++.+.++    +..|+||++||..+..+.++.
T Consensus        75 ---~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~~~  147 (245)
T PRK07060         75 ---AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAA----GRGGSIVNVSSQAALVGLPDH  147 (245)
T ss_pred             ---hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCCcEEEEEccHHHcCCCCCC
Confidence               468999999999853  34467889999999999999999999999998753    124799999998887764433


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.+|++.+.+++.++..
T Consensus       148 ----------~~y~~sK~a~~~~~~~~a~~  167 (245)
T PRK07060        148 ----------LAYCASKAALDAITRVLCVE  167 (245)
T ss_pred             ----------cHhHHHHHHHHHHHHHHHHH
Confidence                      37999999999999888653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.8e-24  Score=170.69  Aligned_cols=161  Identities=22%  Similarity=0.251  Sum_probs=131.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      |+++||||++|||.+++++|+++|++|++++|+.. .++    .+.... +.++.++++|++++++++++++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~----~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELT----KLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHH----HHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            68999999999999999999999999999999863 222    222222 456889999999999999999998776653


Q ss_pred             c----cEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          111 L----NILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       111 i----d~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .    +++|+|||...   +..+.+.+++.+.+++|+.+++.+++.++|.|.+.    ...++||++||..+..+.++  
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~~--  150 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDW----KVDKRVINISSGAAKNPYFG--  150 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhcc----CCCceEEEecchhhcCCCCC--
Confidence            2    28999999853   45578899999999999999999999999999763    13579999999877655433  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              ...|+.+|++++++++.++.
T Consensus       151 --------~~~Y~~sKaa~~~~~~~la~  170 (251)
T PRK06924        151 --------WSAYCSSKAGLDMFTQTVAT  170 (251)
T ss_pred             --------cHHHhHHHHHHHHHHHHHHH
Confidence                    34899999999999998864

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-23  Score=169.19  Aligned_cols=159  Identities=25%  Similarity=0.282  Sum_probs=131.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH-HHhhc--
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE-YNIQH--  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-~~~~~--  108 (216)
                      ++++||||+||||.+++++|+++|++|++++|+.+..  .    ... .+.++.++++|+++++++++++++ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            3699999999999999999999999999999986531  1    111 245788999999999999998876 55444  


Q ss_pred             -CCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          109 -HQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       109 -~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                       +++|++|||||...   +..+.+.+++++.+++|+.+++.+++.+++.|.++     ..|+||++||..+..+.+++  
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~--  147 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-----AERRILHISSGAARNAYAGW--  147 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-----CCCEEEEEeChhhcCCCCCc--
Confidence             47999999999863   34467889999999999999999999999999865     57899999998877654433  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.+|++.+++++.++..
T Consensus       148 --------~~Y~~sK~a~~~~~~~~~~~  167 (243)
T PRK07023        148 --------SVYCATKAALDHHARAVALD  167 (243)
T ss_pred             --------hHHHHHHHHHHHHHHHHHhc
Confidence                    38999999999999988753

>PRK08264 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.3e-23  Score=165.76  Aligned_cols=159  Identities=28%  Similarity=0.367  Sum_probs=134.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++.+++++||||+|+||.++++.|+++|+ +|++++|+.++.++         .+.++.++.+|++|+++++++++.  
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~--   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA--   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh--
Confidence            346789999999999999999999999999 99999998765432         145788999999999999887765  


Q ss_pred             hhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                        ++++|++||++|..   .+..+.+.+++.+.+++|+.+++.+++.+.+.+.++     +.+++|++||..+..+.++ 
T Consensus        71 --~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~~~~~-  142 (238)
T PRK08264         71 --ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-----GGGAIVNVLSVLSWVNFPN-  142 (238)
T ss_pred             --cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcChhhccCCCC-
Confidence              35799999999983   345567899999999999999999999999999875     5789999999887765433 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               ...|+.+|++.+++++.++...
T Consensus       143 ---------~~~y~~sK~a~~~~~~~l~~~~  164 (238)
T PRK08264        143 ---------LGTYSASKAAAWSLTQALRAEL  164 (238)
T ss_pred             ---------chHhHHHHHHHHHHHHHHHHHh
Confidence                     3389999999999999887643

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.9e-23  Score=165.58  Aligned_cols=154  Identities=23%  Similarity=0.249  Sum_probs=129.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |.+|+++||||+++||.+++++|+++|++|++++|+.+..          . .  ..++++|++++++++++++++.+.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~-~--~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------F-P--GELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------c-C--ceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999999999986530          1 1  2468899999999999999988776


Q ss_pred             CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                       ++|++|||+|...  +..+.+.+++.+.+++|+.+++.+++.++|.|+++     +.|+||++||... .+.++     
T Consensus        68 -~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~-~~~~~-----  135 (234)
T PRK07577         68 -PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-----EQGRIVNICSRAI-FGALD-----  135 (234)
T ss_pred             -CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEccccc-cCCCC-----
Confidence             6899999999863  34456889999999999999999999999999875     5689999999753 33222     


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           ...|+.+|++++++++.++..
T Consensus       136 -----~~~Y~~sK~a~~~~~~~~a~e  156 (234)
T PRK07577        136 -----RTSYSAAKSALVGCTRTWALE  156 (234)
T ss_pred             -----chHHHHHHHHHHHHHHHHHHH
Confidence                 348999999999999887653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.6e-23  Score=167.71  Aligned_cols=155  Identities=21%  Similarity=0.198  Sum_probs=114.3

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +....+++|+++||||++|||.++++.|+++|++|++++|+.....+   .. ..  .. ..++.+|++|.+++.+    
T Consensus         7 ~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~~-~~~~~~D~~~~~~~~~----   75 (245)
T PRK12367          7 MAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--SP-NEWIKWECGKEESLDK----   75 (245)
T ss_pred             hhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--CC-CeEEEeeCCCHHHHHH----
Confidence            34556789999999999999999999999999999999998622111   11 11  12 2568899999988764    


Q ss_pred             HHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                         .++++|++|||||.. +..+.+.+++++.+++|+.+++.+++.++|.|.++.  ...++.|++.+|.++..+ +   
T Consensus        76 ---~~~~iDilVnnAG~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--~~~g~~iiv~ss~a~~~~-~---  145 (245)
T PRK12367         76 ---QLASLDVLILNHGIN-PGGRQDPENINKALEINALSSWRLLELFEDIALNNN--SQIPKEIWVNTSEAEIQP-A---  145 (245)
T ss_pred             ---hcCCCCEEEECCccC-CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc--cCCCeEEEEEecccccCC-C---
Confidence               346899999999975 334567899999999999999999999999997631  011334545555544332 1   


Q ss_pred             cCCCCCCCCccchHHHHHHHHHH
Q 027991          184 RFDKINDPSGSFQSSALLLLLLL  206 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~  206 (216)
                             ....|++||+++..+.
T Consensus       146 -------~~~~Y~aSKaal~~~~  161 (245)
T PRK12367        146 -------LSPSYEISKRLIGQLV  161 (245)
T ss_pred             -------CCchhHHHHHHHHHHH
Confidence                   1236999999987665

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.5e-23  Score=165.45  Aligned_cols=159  Identities=23%  Similarity=0.301  Sum_probs=131.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+++||||++|||.+++++|+++|++|++++|+.+..++.. +      ..++.+..+|++|+++++++++++.+  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~------~~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-A------LPGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-h------ccccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            68999999999999999999999999999999987654331 1      12467788999999999999998754  479


Q ss_pred             cEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          112 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       112 d~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      |++|||||+..    +..+.+.+++.+.+++|+.+++.+++.+++.+.+      ..++|+++||..+..+.+..     
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~iv~~ss~~g~~~~~~~-----  141 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP------GQGVLAFMSSQLGSVELPDG-----  141 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh------cCCEEEEEccCccccccCCC-----
Confidence            99999999863    3456788999999999999999999999999875      35799999998776643221     


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                        .....|+.+|++++++++.++..
T Consensus       142 --~~~~~Y~~sK~a~~~~~~~l~~e  164 (225)
T PRK08177        142 --GEMPLYKASKAALNSMTRSFVAE  164 (225)
T ss_pred             --CCccchHHHHHHHHHHHHHHHHH
Confidence              23347999999999999998764

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=169.29  Aligned_cols=165  Identities=25%  Similarity=0.202  Sum_probs=129.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++.+|+++||||+||||.+++++|+++|++|++++|+.+ ..+...+++...  +.++.++++|+++++++.++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999998753 344444555433  45688899999999999999999998


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccCCccC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEGIRF  185 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~~  185 (216)
                      .++++|++|||||.... .   ..++...+++|+.+++.+++.+.|.|.+       .|+||++||..+.. +..  .  
T Consensus        81 ~~~~~d~vi~~ag~~~~-~---~~~~~~~~~vn~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~~~--~--  145 (248)
T PRK07806         81 EFGGLDALVLNASGGME-S---GMDEDYAMRLNRDAQRNLARAALPLMPA-------GSRVVFVTSHQAHFIPTV--K--  145 (248)
T ss_pred             hCCCCcEEEECCCCCCC-C---CCCcceeeEeeeHHHHHHHHHHHhhccC-------CceEEEEeCchhhcCccc--c--
Confidence            89999999999987421 1   1234568999999999999999999853       57999999965432 110  0  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                        .......|+.||++.+.+++.++.
T Consensus       146 --~~~~~~~Y~~sK~a~e~~~~~l~~  169 (248)
T PRK07806        146 --TMPEYEPVARSKRAGEDALRALRP  169 (248)
T ss_pred             --CCccccHHHHHHHHHHHHHHHHHH
Confidence              011244899999999999988854

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=2.9e-23  Score=181.12  Aligned_cols=165  Identities=28%  Similarity=0.317  Sum_probs=136.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++++++||||++|||.+++++|+++|++|+++++....  +..+++..+.   ...++++|++++++++++++.+.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRV---GGTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999885321  2222333332   2357889999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||+..  +..+.+.++|+.++++|+.+++.+++.+.+.+..+     .+++||++||..+..+.++.   
T Consensus       282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~g~iv~~SS~~~~~g~~~~---  353 (450)
T PRK08261        282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-----DGGRIVGVSSISGIAGNRGQ---  353 (450)
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-----CCCEEEEECChhhcCCCCCC---
Confidence            999999999999863  34567899999999999999999999999975543     46899999999888775543   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.+|+++++|++.++..
T Consensus       354 -------~~Y~asKaal~~~~~~la~e  373 (450)
T PRK08261        354 -------TNYAASKAGVIGLVQALAPL  373 (450)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHH
Confidence                   38999999999999888653

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.91  E-value=8.3e-23  Score=163.13  Aligned_cols=162  Identities=28%  Similarity=0.339  Sum_probs=136.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +||||++++||..++++|+++|++|++++|+. +..+...+.+...  +.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 3344444444332  44688999999999999999999999899999


Q ss_pred             EEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCC
Q 027991          113 ILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  190 (216)
                      ++||++|...  +..+.+.+++++.+++|+.+++.+.+.+.+.+.++     +.++++++||.++..+.++.        
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~g~~~~--------  145 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-----RSGRIINISSVVGLMGNAGQ--------  145 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEECCccccCCCCCC--------
Confidence            9999999863  33466788999999999999999999999998764     46799999999888875543        


Q ss_pred             CCccchHHHHHHHHHHHHHHhh
Q 027991          191 PSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                        ..|+.+|++.+++++.+...
T Consensus       146 --~~y~~~k~a~~~~~~~l~~~  165 (239)
T TIGR01830       146 --ANYAASKAGVIGFTKSLAKE  165 (239)
T ss_pred             --chhHHHHHHHHHHHHHHHHH
Confidence              37999999999999887653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.6e-23  Score=160.95  Aligned_cols=139  Identities=16%  Similarity=0.198  Sum_probs=120.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++||||++|||.+++++|+++ ++|++++|+..                   .+++|++|++++++++++    .+++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence            6999999999999999999999 99999998742                   367999999999998875    36899


Q ss_pred             EEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCC
Q 027991          113 ILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (216)
Q Consensus       113 ~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  190 (216)
                      ++|||||..  .+..+.+.++|.+.+++|+.+++.+++.+.|.|.+       .|+|+++||..+..+.++..       
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~iss~~~~~~~~~~~-------  123 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------GGSFTLTSGILSDEPIPGGA-------  123 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCeEEEEcccccCCCCCCch-------
Confidence            999999975  34456788999999999999999999999999974       58999999988877655443       


Q ss_pred             CCccchHHHHHHHHHHHHHHhh
Q 027991          191 PSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         .|+.||+++++|++.++..
T Consensus       124 ---~Y~~sK~a~~~~~~~la~e  142 (199)
T PRK07578        124 ---SAATVNGALEGFVKAAALE  142 (199)
T ss_pred             ---HHHHHHHHHHHHHHHHHHH
Confidence               8999999999999988653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.5e-22  Score=161.80  Aligned_cols=166  Identities=19%  Similarity=0.132  Sum_probs=135.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.++.+...+.+...   .++.++++|++++++++++++++...
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999987766554544432   35788999999999999999999888


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++++|.+|+++|..........++++..+++|+.+++.+++.++|.+.+       +|++|++||..+..+.        
T Consensus        79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~--------  143 (238)
T PRK05786         79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-------GSSIVLVSSMSGIYKA--------  143 (238)
T ss_pred             hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-------CCEEEEEecchhcccC--------
Confidence            8999999999987532222244888999999999999999999999863       5799999997664321        


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                       ......|+.||++...+++.++..
T Consensus       144 -~~~~~~Y~~sK~~~~~~~~~~~~~  167 (238)
T PRK05786        144 -SPDQLSYAVAKAGLAKAVEILASE  167 (238)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHH
Confidence             112347999999999998887754

>PRK08017 oxidoreductase; Provisional

Probab=99.91  E-value=1.8e-22  Score=163.11  Aligned_cols=157  Identities=32%  Similarity=0.353  Sum_probs=132.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc-CC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-HQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~  110 (216)
                      |+++||||+|+||.++++.|+++|++|++++|+.++.+..    ..    ..+.++.+|++|.+++.++++.+.... ++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS----LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999987665432    11    236788999999999999999887643 68


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|.+|||+|...  +..+.+.+++++.+++|+.+++.+++.+++.|.+.     +.++||++||.++..+.++       
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~~-------  142 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-----GEGRIVMTSSVMGLISTPG-------  142 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCEEEEEcCcccccCCCC-------
Confidence            999999999753  45567889999999999999999999999999875     5689999999888766443       


Q ss_pred             CCCCccchHHHHHHHHHHHHHHh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                         ...|+.+|++++.+++.++.
T Consensus       143 ---~~~Y~~sK~~~~~~~~~l~~  162 (256)
T PRK08017        143 ---RGAYAASKYALEAWSDALRM  162 (256)
T ss_pred             ---ccHHHHHHHHHHHHHHHHHH
Confidence               33799999999999987754

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1e-22  Score=162.17  Aligned_cols=152  Identities=20%  Similarity=0.184  Sum_probs=126.5

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccEE
Q 027991           35 IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNIL  114 (216)
Q Consensus        35 lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~l  114 (216)
                      +||||++|||.+++++|+++|++|++++|+.++.+...+++..   +.++.++.+|++|++++.++++++    +++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAEA----GPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence            6999999999999999999999999999997766665555531   456888999999999999988764    689999


Q ss_pred             EECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCC
Q 027991          115 INNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (216)
Q Consensus       115 i~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  192 (216)
                      |||+|...  +..+.+.+++++++++|+.+++.+++  ++.+.       +.|+||++||.++..+.++.          
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~-------~~g~iv~~ss~~~~~~~~~~----------  134 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA-------PGGSLTFVSGFAAVRPSASG----------  134 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc-------CCeEEEEECchhhcCCCCcc----------
Confidence            99999853  34567889999999999999999999  44443       36899999999887764443          


Q ss_pred             ccchHHHHHHHHHHHHHHhh
Q 027991          193 GSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       193 ~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..|+.+|++++++++.++..
T Consensus       135 ~~Y~~sK~a~~~~~~~la~e  154 (230)
T PRK07041        135 VLQGAINAALEALARGLALE  154 (230)
T ss_pred             hHHHHHHHHHHHHHHHHHHH
Confidence            37999999999999988653

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.90  E-value=1.8e-22  Score=161.23  Aligned_cols=155  Identities=22%  Similarity=0.277  Sum_probs=121.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++++||||++|||.+++++|+++|  ..|++.+|+...  .        ....++.++++|++++++++++.    +.++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~--------~~~~~~~~~~~Dls~~~~~~~~~----~~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D--------FQHDNVQWHALDVTDEAEIKQLS----EQFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c--------cccCceEEEEecCCCHHHHHHHH----HhcC
Confidence            479999999999999999999986  566666665432  1        11457889999999999988754    4457


Q ss_pred             CccEEEECCccCCC--------CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          110 QLNILINNAGIMGT--------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       110 ~id~li~~Ag~~~~--------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      ++|++|||||....        ..+.+.+.+.+.+++|+.+++.+++.++|.|.++     +.++|+++||..+......
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----~~~~i~~iss~~~~~~~~~  141 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-----ESAKFAVISAKVGSISDNR  141 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-----CCceEEEEeecccccccCC
Confidence            89999999998631        3356778899999999999999999999999865     4679999998766442111


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..+...|+.+|+++.+|++.++..
T Consensus       142 -------~~~~~~Y~asK~a~~~~~~~la~e  165 (235)
T PRK09009        142 -------LGGWYSYRASKAALNMFLKTLSIE  165 (235)
T ss_pred             -------CCCcchhhhhHHHHHHHHHHHHHH
Confidence                   123348999999999999988753

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.9e-22  Score=157.23  Aligned_cols=157  Identities=25%  Similarity=0.303  Sum_probs=127.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+++||||+++||.+++++|+++|++|++++|+.+..++    +..    ..+.++.+|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQA----LGAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHh----ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            689999999999999999999999999999998665443    222    1356789999999999998877642  479


Q ss_pred             cEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          112 NILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       112 d~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      |++|||+|...    +..+.+.++++..+++|+.+++.+++.++|+|.+      ..|+++++||..+..+.....    
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~g~iv~isS~~~~~~~~~~~----  141 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA------AGGVLAVLSSRMGSIGDATGT----  141 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc------cCCeEEEEcCcccccccccCC----
Confidence            99999999862    2345689999999999999999999999999865      368999999988876532211    


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                         +...|+.+|++.+++++.+..
T Consensus       142 ---~~~~Y~~sK~a~~~~~~~~~~  162 (222)
T PRK06953        142 ---TGWLYRASKAALNDALRAASL  162 (222)
T ss_pred             ---CccccHHhHHHHHHHHHHHhh
Confidence               122699999999999988754

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.89  E-value=2.2e-23  Score=154.72  Aligned_cols=160  Identities=26%  Similarity=0.294  Sum_probs=138.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+|-+++||||.+|+|++.+++|+.+|+.|++.+-...+-.+...++     +.++.+..+|++.+++++..+...+..|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            56789999999999999999999999999999998887777777666     6789999999999999999999999999


Q ss_pred             CCccEEEECCccCC--------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHh-hccCCCCcEEEEEcCCcccccc
Q 027991          109 HQLNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKT-ARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       109 ~~id~li~~Ag~~~--------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      |++|.+|||||+..        .....+.|++++++++|+.|+|+++|...-.|-.. +...+..|.||+..|++++.|.
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence            99999999999852        12235789999999999999999999999998765 3445567899999999999998


Q ss_pred             cCCccCCCCCCCCc
Q 027991          180 HEGIRFDKINDPSG  193 (216)
Q Consensus       180 ~~~~~~~~~~~~~~  193 (216)
                      .+...|++.+.+..
T Consensus       162 ~gqaaysaskgaiv  175 (260)
T KOG1199|consen  162 TGQAAYSASKGAIV  175 (260)
T ss_pred             cchhhhhcccCceE
Confidence            88886666655544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.89  E-value=1.6e-21  Score=166.75  Aligned_cols=157  Identities=22%  Similarity=0.211  Sum_probs=118.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++||||+||||.+++++|+++|++|++++|+.++.++.   ....  ...+..+.+|++|++++.+.+     
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~--~~~v~~v~~Dvsd~~~v~~~l-----  243 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE--DLPVKTLHWQVGQEAALAELL-----  243 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc--CCCeEEEEeeCCCHHHHHHHh-----
Confidence            456899999999999999999999999999999999986654322   2111  234678899999998876544     


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                        +++|++|||||... ..+.+.+++++.+++|+.+++.+++.++|.|+++.. ...++.+|++|+ ++..+ +      
T Consensus       244 --~~IDiLInnAGi~~-~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~-~~~~~iiVn~Ss-a~~~~-~------  311 (406)
T PRK07424        244 --EKVDILIINHGINV-HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRD-KATKEVWVNTSE-AEVNP-A------  311 (406)
T ss_pred             --CCCCEEEECCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCeEEEEEcc-ccccC-C------
Confidence              47999999999853 346788999999999999999999999999987511 112345666654 32211 1      


Q ss_pred             CCCCCCccchHHHHHHHHHHHHH
Q 027991          187 KINDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                          ....|++||+++.+++...
T Consensus       312 ----~~~~Y~ASKaAl~~l~~l~  330 (406)
T PRK07424        312 ----FSPLYELSKRALGDLVTLR  330 (406)
T ss_pred             ----CchHHHHHHHHHHHHHHHH
Confidence                1237999999999997543

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=2.7e-21  Score=146.73  Aligned_cols=159  Identities=21%  Similarity=0.192  Sum_probs=129.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHH---HHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDV---KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      |+++||||++|||.+++++|+++|. .|++++|+.+..+..   .+++...  +.++.++.+|++++++++++++++...
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999997 688888876554332   2334332  567889999999999999999999888


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|.+||++|...  +..+.+.+++++.+++|+.+++.+.+.+.+.         ..++||++||..+..+.++.   
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~ii~~ss~~~~~~~~~~---  146 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL---------PLDFFVLFSSVAGVLGNPGQ---  146 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC---------CcceEEEEccHHHhcCCCCc---
Confidence            999999999999763  3456788999999999999999999988331         35799999999887765433   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ..|+.+|+++..+.+.+..
T Consensus       147 -------~~y~~sk~~~~~~~~~~~~  165 (180)
T smart00822      147 -------ANYAAANAFLDALAAHRRA  165 (180)
T ss_pred             -------hhhHHHHHHHHHHHHHHHh
Confidence                   3799999999999977654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-20  Score=149.85  Aligned_cols=155  Identities=25%  Similarity=0.324  Sum_probs=127.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .|+++||||+|+||.++++.|+++ ++|++++|+.++.++..+    ..  ..+.++++|++|+++++++++++    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAA----EL--PGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHH----Hh--ccceEEecCCCCHHHHHHHHHhc----CC
Confidence            478999999999999999999999 999999998665443322    21  24778999999999998888754    47


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|++||++|...  +..+.+.+++.+.+++|+.+++.+++.+++.+.++      .+++|++||..+..+.++       
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~v~~ss~~~~~~~~~-------  138 (227)
T PRK08219         72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA------HGHVVFINSGAGLRANPG-------  138 (227)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCeEEEEcchHhcCcCCC-------
Confidence            999999999853  34466889999999999999999999999999874      579999999887765443       


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ...|+.+|++.+++++.++..
T Consensus       139 ---~~~y~~~K~a~~~~~~~~~~~  159 (227)
T PRK08219        139 ---WGSYAASKFALRALADALREE  159 (227)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHH
Confidence               347999999999998887653

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=2.7e-22  Score=154.82  Aligned_cols=166  Identities=17%  Similarity=0.151  Sum_probs=133.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .++++|+||+|.|||..+++.+.+++-+....+++...++  .+.+.-.++ ........|+++..-+.++++..+..++
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            4678999999999999999999988865444443332222  222222332 4455566788888888999999999999


Q ss_pred             CccEEEECCccCCCCC-----CCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          110 QLNILINNAGIMGTPF-----MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~-----~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ..|++|||||..++..     +.+..+|.++|+.|+++++.+.+.++|.++++|    ..+-|||+||.++..|.++|. 
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p----~~~~vVnvSS~aav~p~~~wa-  156 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP----VNGNVVNVSSLAAVRPFSSWA-  156 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC----ccCeEEEecchhhhccccHHH-
Confidence            9999999999986543     457889999999999999999999999999862    368999999999999988877 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+++|+|.+||.+.++..
T Consensus       157 ---------~yc~~KaAr~m~f~~lA~E  175 (253)
T KOG1204|consen  157 ---------AYCSSKAARNMYFMVLASE  175 (253)
T ss_pred             ---------HhhhhHHHHHHHHHHHhhc
Confidence                     8999999999999988753

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.87  E-value=8.4e-21  Score=189.14  Aligned_cols=160  Identities=18%  Similarity=0.100  Sum_probs=131.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCc------------------------------------------
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIA------------------------------------------   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~------------------------------------------   66 (216)
                      +++++|||||++|||.+++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 589999999820                                          


Q ss_pred             -----chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHH
Q 027991           67 -----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATN  139 (216)
Q Consensus        67 -----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N  139 (216)
                           ......+.+...  +.++.++.||++|.++++++++++.+. ++||+||||||+.  .+..+.+.++|+++|++|
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                 001112222222  567889999999999999999999876 6899999999986  345678999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       140 ~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +.|.+++++.+.+.+         .++||++||..+.+|.++..          .|+++|++++.+++.+..
T Consensus      2153 v~G~~~Ll~al~~~~---------~~~IV~~SSvag~~G~~gqs----------~YaaAkaaL~~la~~la~ 2205 (2582)
T TIGR02813      2153 VDGLLSLLAALNAEN---------IKLLALFSSAAGFYGNTGQS----------DYAMSNDILNKAALQLKA 2205 (2582)
T ss_pred             HHHHHHHHHHHHHhC---------CCeEEEEechhhcCCCCCcH----------HHHHHHHHHHHHHHHHHH
Confidence            999999998887653         34799999999999866654          799999999999887764

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06720 hypothetical protein; Provisional

Probab=99.86  E-value=1.8e-20  Score=142.76  Aligned_cols=146  Identities=19%  Similarity=0.213  Sum_probs=117.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++||||++|||.++++.|+++|++|++++|+.+..++..+++...  +.+..++.+|+++.++++++++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4478999999999999999999999999999999999987777666666533  44577889999999999999999999


Q ss_pred             hcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc--CCCCcEEEEEcCCcccc
Q 027991          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK--SGGEGRIINVSSEGHRL  177 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~g~iv~isS~~~~~  177 (216)
                      .+|++|++|||||+..   +..+.++++ ++  .+|+.+.++.++.+.+.|.++.+.  ..+.||+..||+.+...
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            9999999999999863   222334334 44  667778899999999998876432  33568888888866544

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.86  E-value=7.9e-20  Score=141.40  Aligned_cols=165  Identities=14%  Similarity=0.122  Sum_probs=143.5

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..++||++||+|-.  ++|+..|||.|.++|+++.+++.++ +++...+++.++.+.  ..+++||++++++++++|+++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s--~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS--DLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC--CeEEecCCCCHHHHHHHHHHH
Confidence            56899999999987  5999999999999999999999986 677777777776532  567999999999999999999


Q ss_pred             HhhcCCccEEEECCccC------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          105 NIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++++|.+|.|||+.+..      +...+.+.|.|...+++...+...+.|++.|+|.       .+|+||.++-..+...
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~-------~ggSiltLtYlgs~r~  151 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN-------NGGSILTLTYLGSERV  151 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC-------CCCcEEEEEeccceee
Confidence            99999999999999975      3456789999999999999999999999999998       4899999998777666


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .|.+-          .-+..||+++.-++-++.
T Consensus       152 vPnYN----------vMGvAKAaLEasvRyLA~  174 (259)
T COG0623         152 VPNYN----------VMGVAKAALEASVRYLAA  174 (259)
T ss_pred             cCCCc----------hhHHHHHHHHHHHHHHHH
Confidence            55542          448999999998887764

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.85  E-value=2.5e-20  Score=146.03  Aligned_cols=170  Identities=24%  Similarity=0.286  Sum_probs=137.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-----eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-----HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-----~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +|+++|||+++|||+++|++|++...     +|+++.|+-+++++++..+.+.+|  ..++.++..|+++..++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            68999999999999999999998753     578889999999999999999998  55799999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC----------------CC-------------CCCChHHHHHHHHHHHhHHHHHHHHHHHHH
Q 027991          104 YNIQHHQLNILINNAGIMG----------------TP-------------FMLSKDNIELQFATNHLGHFLLTNLLLDTM  154 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~----------------~~-------------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  154 (216)
                      +..+|.++|.++.|||+..                |.             ...+.+++..+|++|++|+|++.+.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            9999999999999999541                10             023567788999999999999999999999


Q ss_pred             HHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHH
Q 027991          155 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLL  206 (216)
Q Consensus       155 ~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~  206 (216)
                      ..+     ....+|.+||..+.-..-...++. .......|.+||.+..-|.
T Consensus       163 ~~~-----~~~~lvwtSS~~a~kk~lsleD~q-~~kg~~pY~sSKrl~DlLh  208 (341)
T KOG1478|consen  163 CHS-----DNPQLVWTSSRMARKKNLSLEDFQ-HSKGKEPYSSSKRLTDLLH  208 (341)
T ss_pred             hcC-----CCCeEEEEeecccccccCCHHHHh-hhcCCCCcchhHHHHHHHH
Confidence            875     455899999976544322211111 1223347899998876554

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.85  E-value=6.7e-20  Score=141.37  Aligned_cols=159  Identities=19%  Similarity=0.200  Sum_probs=125.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC---cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++|||||.+|||..+++.|+++|+ +|++++|+.   ...++..+++...  +.++.++++|++|++++.++++++.+.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            689999999999999999999996 899999993   2345667777765  7799999999999999999999999999


Q ss_pred             CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      ++||.+||.||..  .+..+.+.+++..++...+.+..++.+.+.+.         +-..+|++||..+..|.++..   
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~---------~l~~~i~~SSis~~~G~~gq~---  147 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR---------PLDFFILFSSISSLLGGPGQS---  147 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT---------TTSEEEEEEEHHHHTT-TTBH---
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC---------CCCeEEEECChhHhccCcchH---
Confidence            9999999999997  35667899999999999999999999987662         355899999999999988776   


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             .|++.-+.+..+.+..+..
T Consensus       148 -------~YaaAN~~lda~a~~~~~~  166 (181)
T PF08659_consen  148 -------AYAAANAFLDALARQRRSR  166 (181)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHT
T ss_pred             -------hHHHHHHHHHHHHHHHHhC
Confidence                   7888888888888776653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=1.5e-19  Score=151.23  Aligned_cols=164  Identities=17%  Similarity=0.109  Sum_probs=121.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+|++|||||+|+||.+++++|+++|++|++++|+.+..+.....+.......++.++.+|++|.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            3789999999999999999999999999999988876554432222111112468899999999999888775       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC------Cc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE------GI  183 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------~~  183 (216)
                      ++|++||+||....  ..+.+.+.+.+++|+.+++++++++.+.+.        .++||++||.++..+...      ..
T Consensus        77 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~--------~~~iv~~SS~~~~~~~~~~~~~~~~~  146 (325)
T PLN02989         77 GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVSS--------VKRVILTSSMAAVLAPETKLGPNDVV  146 (325)
T ss_pred             CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcCC--------ceEEEEecchhheecCCccCCCCCcc
Confidence            58999999997532  234556788999999999999999987632        458999999877654321      11


Q ss_pred             cCCCCCCC------CccchHHHHHHHHHHHHHH
Q 027991          184 RFDKINDP------SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ~~~~~~~~------~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..+....+      ...|+.||.+.+.++..+.
T Consensus       147 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~  179 (325)
T PLN02989        147 DETFFTNPSFAEERKQWYVLSKTLAEDAAWRFA  179 (325)
T ss_pred             CcCCCCchhHhcccccchHHHHHHHHHHHHHHH
Confidence            22222222      3579999999998887654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.84  E-value=3.3e-19  Score=150.76  Aligned_cols=165  Identities=19%  Similarity=0.098  Sum_probs=123.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|++|||||+|+||.++++.|+++|++|++++|+..........+..   ..++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence            4679999999999999999999999999999999887654433322221   235778899999999999988864    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~  186 (216)
                       ++|++||+|+...  ...+.+++...+++|+.+++.+++++.+. .       ..+++|++||...+.....  .....
T Consensus        75 -~~d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~-------~~~~iv~~SS~~vyg~~~~~~~~~e~  143 (349)
T TIGR02622        75 -KPEIVFHLAAQPL--VRKSYADPLETFETNVMGTVNLLEAIRAI-G-------SVKAVVNVTSDKCYRNDEWVWGYRET  143 (349)
T ss_pred             -CCCEEEECCcccc--cccchhCHHHHHHHhHHHHHHHHHHHHhc-C-------CCCEEEEEechhhhCCCCCCCCCccC
Confidence             5899999999642  23455677889999999999999987432 1       2468999999654321111  11223


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ....+...|+.||++.+.+++.+..
T Consensus       144 ~~~~p~~~Y~~sK~~~e~~~~~~~~  168 (349)
T TIGR02622       144 DPLGGHDPYSSSKACAELVIASYRS  168 (349)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHH
Confidence            3455677999999999999987754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.84  E-value=2.2e-19  Score=151.24  Aligned_cols=172  Identities=15%  Similarity=0.063  Sum_probs=124.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch-HHHHHHHHhh--cCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKE--IPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.++|++|||||+|+||.+++++|+++|++|++++|+.+.. ....+.+...  ..+.++.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            56789999999999999999999999999999998875431 1112222110  01345889999999999999988875


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-Cc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GI  183 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~  183 (216)
                           ++|++||+|+.....  ...++....+++|+.++.++++++.+.+.++    +..-++|++||.. .++... ..
T Consensus        83 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~----~~~~~~v~~Ss~~-vyg~~~~~~  150 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQET----GRQIKYYQAGSSE-MYGSTPPPQ  150 (340)
T ss_pred             -----CCCEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhcccc----ccceeEEEeccHH-HhCCCCCCC
Confidence                 589999999985322  2334557788999999999999998886531    0012688888753 233221 22


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ..+.+..+...|+.||.+.+.+++.++.
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~  178 (340)
T PLN02653        151 SETTPFHPRSPYAVAKVAAHWYTVNYRE  178 (340)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            3345566777999999999999887653

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.82  E-value=1.2e-18  Score=146.08  Aligned_cols=147  Identities=15%  Similarity=0.162  Sum_probs=112.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++|++|||||+|+||.+++++|+++|  ++|++.+|+.......    ....+..++.++.+|++|.+.+.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~----~~~~~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEM----QQKFPAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHH----HHHhCCCcEEEEEccCCCHHHHHHHHh----
Confidence            468999999999999999999999987  6899998875543322    222223468899999999999888765    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                         ++|++||+||.....  ....+..+.+++|+.++.++++++.+.         +.++||++||...           
T Consensus        74 ---~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~---------~~~~iV~~SS~~~-----------  128 (324)
T TIGR03589        74 ---GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN---------GVKRVVALSTDKA-----------  128 (324)
T ss_pred             ---cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeCCCC-----------
Confidence               589999999975321  122334578999999999999998763         3468999998532           


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHH
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                        ..|...|+.||++.+.+++.+.
T Consensus       129 --~~p~~~Y~~sK~~~E~l~~~~~  150 (324)
T TIGR03589       129 --ANPINLYGATKLASDKLFVAAN  150 (324)
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHH
Confidence              2234579999999999987654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.80  E-value=2.1e-18  Score=138.79  Aligned_cols=156  Identities=21%  Similarity=0.128  Sum_probs=128.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +++|||||+|-||...+++|++.|++|++.|+-+....+.....       ...+++.|+.|.+.++++|++-     +|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence            36999999999999999999999999999999877655554322       1578999999999999999875     79


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc--CCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR--FDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~--~~~~~  189 (216)
                      |.+||-||...  ...+.++..++++.|+.+++.|++++...-.+         + +++||.++.+|.|...+  .+.+.
T Consensus        69 daViHFAa~~~--VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~---------~-~vFSStAavYG~p~~~PI~E~~~~  136 (329)
T COG1087          69 DAVVHFAASIS--VGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK---------K-FIFSSTAAVYGEPTTSPISETSPL  136 (329)
T ss_pred             CEEEECccccc--cchhhhCHHHHHhhchHhHHHHHHHHHHhCCC---------E-EEEecchhhcCCCCCcccCCCCCC
Confidence            99999999753  22367778899999999999999999887543         3 55678888888887544  56888


Q ss_pred             CCCccchHHHHHHHHHHHHHHh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .|...||.||.+.+.+.+-+..
T Consensus       137 ~p~NPYG~sKlm~E~iL~d~~~  158 (329)
T COG1087         137 APINPYGRSKLMSEEILRDAAK  158 (329)
T ss_pred             CCCCcchhHHHHHHHHHHHHHH
Confidence            8999999999999988876653

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=3.3e-18  Score=144.26  Aligned_cols=166  Identities=16%  Similarity=0.065  Sum_probs=119.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch-HHHHHHHHhhc---CCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKEI---PSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.. ....+.+....   .+.++.++.+|++|.+.+.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999886421 11111111110   1245889999999999999988864   


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~  185 (216)
                        ++|++||+|+.....  .+.+.....+++|+.++.++++++.+.-.+      +..++|++||...+ |.+.  ....
T Consensus        78 --~~d~ViH~Aa~~~~~--~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~------~~~~~v~~SS~~vy-g~~~~~~~~E  146 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK--VSFEIPEYTADVDGIGTLRLLEAVRTLGLI------KSVKFYQASTSELY-GKVQEIPQNE  146 (343)
T ss_pred             --CCCEEEECCcccccc--hhhhChHHHHHHHHHHHHHHHHHHHHhCCC------cCeeEEEeccHHhh-CCCCCCCCCC
Confidence              589999999985432  123334567889999999999999875221      12378999986432 3221  1233


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +.+..+...|+.||.+.+.+++.+..
T Consensus       147 ~~~~~p~~~Y~~sK~~~e~~~~~~~~  172 (343)
T TIGR01472       147 TTPFYPRSPYAAAKLYAHWITVNYRE  172 (343)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            44556778999999999999977643

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.80  E-value=1.2e-17  Score=145.39  Aligned_cols=170  Identities=11%  Similarity=0.069  Sum_probs=119.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch----------------HHHHHHHHhhcCCCeEEEEEcc
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG----------------KDVKETIVKEIPSAKVDAMELD   90 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~D   90 (216)
                      ..++++++|||||+|+||..++++|+++|++|+++++.....                .+..+.+... .+.++.++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEECC
Confidence            446788999999999999999999999999999987532110                0011111111 13468899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEE
Q 027991           91 LSSLASVRNFASEYNIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (216)
Q Consensus        91 v~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~  169 (216)
                      ++|.+.+.+++++.     ++|+|||+|+.... ....+++++...+++|+.+++++++++...-.        +.++|+
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv--------~~~~V~  188 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP--------DCHLVK  188 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC--------CccEEE
Confidence            99999999988864     68999999976432 22334566778899999999999998866521        247999


Q ss_pred             EcCCcccccccCC------ccC------C---CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          170 VSSEGHRLAYHEG------IRF------D---KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       170 isS~~~~~~~~~~------~~~------~---~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +||...+ |.+..      ...      +   ....+...|+.||.+.+.+++.+..
T Consensus       189 ~SS~~vY-G~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~  244 (442)
T PLN02572        189 LGTMGEY-GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCK  244 (442)
T ss_pred             Eecceec-CCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHH
Confidence            9986433 22110      000      1   2345667899999999988877643

>PLN02240 UDP-glucose 4-epimerase

Probab=99.79  E-value=1.5e-17  Score=140.53  Aligned_cols=166  Identities=17%  Similarity=0.165  Sum_probs=120.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc--CCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .|.+|+++||||+|+||.+++++|+++|++|++++|.........+.+....  ...++.++.+|++|++++.+++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            4678999999999999999999999999999999876433322222222211  1245788999999999999888753 


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--c
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--I  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~  183 (216)
                          ++|++||+|+.....  .+.+++.+.+++|+.++.++++++...         +.+++|++||.. .++.+..  .
T Consensus        81 ----~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~-vyg~~~~~~~  144 (352)
T PLN02240         81 ----RFDAVIHFAGLKAVG--ESVAKPLLYYDNNLVGTINLLEVMAKH---------GCKKLVFSSSAT-VYGQPEEVPC  144 (352)
T ss_pred             ----CCCEEEEccccCCcc--ccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHH-HhCCCCCCCC
Confidence                789999999975321  234567789999999999998865332         245899999953 3332221  2


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..+.+..+...|+.||.+.+.+++.+.
T Consensus       145 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~  171 (352)
T PLN02240        145 TEEFPLSATNPYGRTKLFIEEICRDIH  171 (352)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            233455567799999999999887664

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.78  E-value=2.4e-17  Score=139.56  Aligned_cols=169  Identities=15%  Similarity=0.097  Sum_probs=117.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEE-EEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      |++|||||+|+||.++++.|+++|++++ +.++.... ... ..+....+..++.++.+|++|.+++++++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5799999999999999999999998754 45554321 111 11111112346788899999999999888752     6


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc----cCCccCC
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY----HEGIRFD  186 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~~~  186 (216)
                      +|++||+||....  +.+.+++...+++|+.+++.+++++.+.|........+..++|++||.+.+ +.    ......+
T Consensus        75 ~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vy-g~~~~~~~~~~E~  151 (355)
T PRK10217         75 PDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVY-GDLHSTDDFFTET  151 (355)
T ss_pred             CCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhc-CCCCCCCCCcCCC
Confidence            9999999997532  234566788999999999999999988653210000023489999985432 21    1112234


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHH
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ....+...|+.||.+.+.++..+.
T Consensus       152 ~~~~p~s~Y~~sK~~~e~~~~~~~  175 (355)
T PRK10217        152 TPYAPSSPYSASKASSDHLVRAWL  175 (355)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHH
Confidence            455567789999999999987764

>PLN02214 cinnamoyl-CoA reductase

Probab=99.77  E-value=3.1e-17  Score=138.43  Aligned_cols=157  Identities=16%  Similarity=0.105  Sum_probs=117.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH-HHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV-KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++++|||||+|+||.+++++|+++|++|++++|+.+..... ...+..  ...++.++.+|++|.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence            4678999999999999999999999999999999986543221 122211  12458889999999999888775     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-----
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-----  182 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  182 (216)
                        ++|++||+|+...       +++.+.+++|+.++.++++++.+.         +.++||++||..+.++.+..     
T Consensus        81 --~~d~Vih~A~~~~-------~~~~~~~~~nv~gt~~ll~aa~~~---------~v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 --GCDGVFHTASPVT-------DDPEQMVEPAVNGAKFVINAAAEA---------KVKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             --cCCEEEEecCCCC-------CCHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEEeccceeeeccCCCCCCcc
Confidence              5899999999641       245678999999999999988653         23589999998766653221     


Q ss_pred             ccCCC------CCCCCccchHHHHHHHHHHHHHH
Q 027991          183 IRFDK------INDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       183 ~~~~~------~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...+.      ...+...|+.||.+.+.++..+.
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~  176 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETA  176 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHH
Confidence            11111      22355689999999999887764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=3.8e-17  Score=136.60  Aligned_cols=164  Identities=20%  Similarity=0.152  Sum_probs=115.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+||++|||||+|+||.+++++|+++|++|+++.|+.+..+...+.........++.++.+|++|++.+.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            46899999999999999999999999999999998876544332222111112468889999999999888876      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccC---Ccc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHE---GIR  184 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~---~~~  184 (216)
                       ++|++||+|+.....   ..+...+.+++|+.++.++++++.+..        ..++||++||.++.. +.+.   ...
T Consensus        77 -~~d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~rvV~~SS~~~~~~~~~~~~~~~~  144 (322)
T PLN02986         77 -GCDAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKETP--------SVKRVILTSSTAAVLFRQPPIEANDV  144 (322)
T ss_pred             -CCCEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhcC--------CccEEEEecchhheecCCccCCCCCC
Confidence             589999999974321   112235679999999999999875431        135899999987642 2211   111


Q ss_pred             C--CCCC------CCCccchHHHHHHHHHHHHHH
Q 027991          185 F--DKIN------DPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       185 ~--~~~~------~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +  +...      .+...|+.||.+.+.++..+.
T Consensus       145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~  178 (322)
T PLN02986        145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFA  178 (322)
T ss_pred             cCcccCCChHHhhccccchHHHHHHHHHHHHHHH
Confidence            1  1111      234579999999988877654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.76  E-value=3.7e-17  Score=138.30  Aligned_cols=164  Identities=21%  Similarity=0.073  Sum_probs=116.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ..|++|||||+|+||.+++++|+++|++|++++|+.+................++.++.+|++|.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            3578999999999999999999999999999998866554432221111002358889999999998888775       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-ccCCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKI  188 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~~~~~  188 (216)
                      .+|++||+|+.... .  ..+.....+++|+.++.++++++.+...        .++||++||.....+.+.. +.|+..
T Consensus        77 ~~d~ViH~A~~~~~-~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--------~~r~v~~SS~~~~~~~~~~~~~~~E~  145 (351)
T PLN02650         77 GCTGVFHVATPMDF-E--SKDPENEVIKPTVNGMLSIMKACAKAKT--------VRRIVFTSSAGTVNVEEHQKPVYDED  145 (351)
T ss_pred             CCCEEEEeCCCCCC-C--CCCchhhhhhHHHHHHHHHHHHHHhcCC--------ceEEEEecchhhcccCCCCCCccCcc
Confidence            47999999986431 1  1122357899999999999999877531        2489999997554432211 112111


Q ss_pred             -----------CCCCccchHHHHHHHHHHHHHHh
Q 027991          189 -----------NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       189 -----------~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                                 ..+...|+.||.+.+.+++.+..
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  179 (351)
T PLN02650        146 CWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAA  179 (351)
T ss_pred             cCCchhhhhccccccchHHHHHHHHHHHHHHHHH
Confidence                       11234799999999998877653

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.76  E-value=8.3e-17  Score=136.30  Aligned_cols=166  Identities=17%  Similarity=0.069  Sum_probs=118.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ...++++|||||+|+||..++++|+++|++|++++|+.+..+.....+.   .+.++.++.+|+++.+.+.++++     
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK---EGDRLRLFRADLQEEGSFDEAVK-----   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc---cCCeEEEEECCCCCHHHHHHHHc-----
Confidence            3457789999999999999999999999999999988655444333322   13568899999999999887764     


Q ss_pred             cCCccEEEECCccCCCCC---CCChHHH--HHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-
Q 027991          108 HHQLNILINNAGIMGTPF---MLSKDNI--ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-  181 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~---~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  181 (216)
                        ++|++||+|+......   ..+.+.+  .+++++|+.++..+++++.+..        ..++||++||.+.+...+. 
T Consensus        79 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~--------~~~~~v~~SS~~vyg~~~~~  148 (353)
T PLN02896         79 --GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK--------TVKRVVFTSSISTLTAKDSN  148 (353)
T ss_pred             --CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC--------CccEEEEEechhhccccccC
Confidence              4799999999864322   1233333  4577888899999999887653        1358999999765542221 


Q ss_pred             -----CccCC--CC-------CCCCccchHHHHHHHHHHHHHHh
Q 027991          182 -----GIRFD--KI-------NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       182 -----~~~~~--~~-------~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                           ....+  .+       ..+...|+.||.+.+.++..+..
T Consensus       149 ~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  192 (353)
T PLN02896        149 GRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAK  192 (353)
T ss_pred             CCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHH
Confidence                 01111  00       12334799999999998877653

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.76  E-value=7.7e-17  Score=135.64  Aligned_cols=165  Identities=16%  Similarity=0.058  Sum_probs=116.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.++++|||||+|+||..++++|+++|++|+++.|+.+....... +.......++.++.+|++|++++.++++     
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh-----
Confidence            4567899999999999999999999999999988887654322211 1111001257889999999998887765     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc----CC-
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH----EG-  182 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~-  182 (216)
                        ++|++||+|+... ..  ..+.....+++|+.++.++++++.+..        +.++||++||.+.+.+.+    +. 
T Consensus        80 --~~d~vih~A~~~~-~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~--------~~~~~v~~SS~~~~g~~~~~~~~~~  146 (338)
T PLN00198         80 --GCDLVFHVATPVN-FA--SEDPENDMIKPAIQGVHNVLKACAKAK--------SVKRVILTSSAAAVSINKLSGTGLV  146 (338)
T ss_pred             --cCCEEEEeCCCCc-cC--CCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeecceeeeccCCCCCCce
Confidence              5799999999632 11  123345678999999999999987642        235899999976554221    10 


Q ss_pred             ccC---------CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRF---------DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~---------~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ...         +....+...|+.||.+.+.+++.+..
T Consensus       147 ~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~  184 (338)
T PLN00198        147 MNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAE  184 (338)
T ss_pred             eccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHH
Confidence            001         11234566899999999988877654

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.75  E-value=1.2e-16  Score=135.16  Aligned_cols=170  Identities=10%  Similarity=0.047  Sum_probs=121.3

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc---CCCeEEEEEccCCCHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI---PSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      .....+++|++|||||+|.||..++++|+++|++|++++|.........+.+....   ...++.++.+|++|.+.+.++
T Consensus         8 ~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (348)
T PRK15181          8 RTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA   87 (348)
T ss_pred             hhcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence            34566788999999999999999999999999999999986544333222222111   123578899999998888777


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++       .+|++||.|+......  +.++....+++|+.++.++++.+...         +..++|++||...+-..+
T Consensus        88 ~~-------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~~---------~~~~~v~~SS~~vyg~~~  149 (348)
T PRK15181         88 CK-------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARDA---------HVSSFTYAASSSTYGDHP  149 (348)
T ss_pred             hh-------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeechHhhCCCC
Confidence            75       4899999999754322  33445668999999999999887543         234899999864332112


Q ss_pred             C-CccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          181 E-GIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       181 ~-~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      . .........+...|+.||.+.+.+++.+..
T Consensus       150 ~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~  181 (348)
T PRK15181        150 DLPKIEERIGRPLSPYAVTKYVNELYADVFAR  181 (348)
T ss_pred             CCCCCCCCCCCCCChhhHHHHHHHHHHHHHHH
Confidence            1 122234455677899999999988876543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.1e-16  Score=138.59  Aligned_cols=156  Identities=19%  Similarity=0.163  Sum_probs=134.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      -.+.||++|||||+|.||.++++++++.+. ++++.+|++.+......++...+|..++..+-+|+.|.+.++++++.. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            347899999999999999999999999996 799999999999888999998888889999999999999999998864 


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                          ++|+++|.|+.-+  ...-+.++.+.+.+|+.|+.++++++...-.+         ++|.+|+--+..        
T Consensus       325 ----kvd~VfHAAA~KH--VPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~---------~~V~iSTDKAV~--------  381 (588)
T COG1086         325 ----KVDIVFHAAALKH--VPLVEYNPEEAIKTNVLGTENVAEAAIKNGVK---------KFVLISTDKAVN--------  381 (588)
T ss_pred             ----CCceEEEhhhhcc--CcchhcCHHHHHHHhhHhHHHHHHHHHHhCCC---------EEEEEecCcccC--------
Confidence                6999999999853  33356667789999999999999999988554         799999854443        


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                           |...||.||.+-+.+.+.+..
T Consensus       382 -----PtNvmGaTKr~aE~~~~a~~~  402 (588)
T COG1086         382 -----PTNVMGATKRLAEKLFQAANR  402 (588)
T ss_pred             -----CchHhhHHHHHHHHHHHHHhh
Confidence                 556899999999999988754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.73  E-value=1.9e-17  Score=133.09  Aligned_cols=135  Identities=26%  Similarity=0.214  Sum_probs=105.2

Q ss_pred             HHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEECCccCCCCCC
Q 027991           47 TARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM  126 (216)
Q Consensus        47 ~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~  126 (216)
                      ++++|+++|++|++++|+.++.+     .        ..++++|++|.++++++++++.   +++|+||||||...    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999999999999876531     0        2357899999999999998874   68999999999752    


Q ss_pred             CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC-----------------CCCC
Q 027991          127 LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF-----------------DKIN  189 (216)
Q Consensus       127 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~-----------------~~~~  189 (216)
                        .+.++..+++|+.+++.+++.++|.|.+       .|+||++||.++....+.....                 ..+.
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTEALLPRMAP-------GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV  131 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHHHHHHhccC-------CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCC
Confidence              2357899999999999999999999863       4899999998876421110000                 0233


Q ss_pred             CCCccchHHHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .....|+.||++++++++.+.
T Consensus       132 ~~~~~Y~~sK~a~~~~~~~la  152 (241)
T PRK12428        132 ALATGYQLSKEALILWTMRQA  152 (241)
T ss_pred             CcccHHHHHHHHHHHHHHHHH
Confidence            445689999999999998887

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.73  E-value=1.5e-16  Score=132.79  Aligned_cols=162  Identities=17%  Similarity=0.090  Sum_probs=113.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc-CCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+|++|||||+|+||..++++|+++|++|++++|+....... ..+.... ...++.++.+|++|++.+.++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            468999999999999999999999999999999886543322 1121110 12468899999999988887775      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc-cc-cc---C-C
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LA-YH---E-G  182 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~-~~---~-~  182 (216)
                       ++|++||+|+......   .....+.+++|+.++.++++++....        +..+||++||.++. ++ .+   . .
T Consensus        76 -~~d~Vih~A~~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~~~v~~SS~~~~~y~~~~~~~~~~  143 (322)
T PLN02662         76 -GCEGVFHTASPFYHDV---TDPQAELIDPAVKGTLNVLRSCAKVP--------SVKRVVVTSSMAAVAYNGKPLTPDVV  143 (322)
T ss_pred             -CCCEEEEeCCcccCCC---CChHHHHHHHHHHHHHHHHHHHHhCC--------CCCEEEEccCHHHhcCCCcCCCCCCc
Confidence             5799999999753211   11224789999999999999987542        13489999997642 22 11   1 1


Q ss_pred             ccCCCCCCC------CccchHHHHHHHHHHHHHH
Q 027991          183 IRFDKINDP------SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       183 ~~~~~~~~~------~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...+....+      ...|+.||.+.+.+++.+.
T Consensus       144 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~  177 (322)
T PLN02662        144 VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFA  177 (322)
T ss_pred             CCcccCCChhHhhcccchHHHHHHHHHHHHHHHH
Confidence            111222222      2379999999998887654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.73  E-value=4.6e-16  Score=130.70  Aligned_cols=160  Identities=20%  Similarity=0.187  Sum_probs=113.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||..+++.|+++|++|++++|..+........+.. .++.++.++.+|++|.+.+.++++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHH-hcCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            589999999999999999999999999988754433322222222 2234577889999999998888764     3699


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc--CCCCC-
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR--FDKIN-  189 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~--~~~~~-  189 (216)
                      ++||+||......  ..+...+.+++|+.++..+++++...         +.+++|++||... ++......  .+.+. 
T Consensus        76 ~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~-yg~~~~~~~~E~~~~~  143 (338)
T PRK10675         76 TVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMRAA---------NVKNLIFSSSATV-YGDQPKIPYVESFPTG  143 (338)
T ss_pred             EEEECCccccccc--hhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHh-hCCCCCCccccccCCC
Confidence            9999999753211  22345678899999999998765432         3458999999643 33222212  22222 


Q ss_pred             CCCccchHHHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+...|+.+|.+.+.+++.+.
T Consensus       144 ~p~~~Y~~sK~~~E~~~~~~~  164 (338)
T PRK10675        144 TPQSPYGKSKLMVEQILTDLQ  164 (338)
T ss_pred             CCCChhHHHHHHHHHHHHHHH
Confidence            456799999999999888764

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.73  E-value=3.4e-16  Score=132.36  Aligned_cols=169  Identities=16%  Similarity=0.100  Sum_probs=115.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++|||||+|+||..+++.|+++|++ |+.+++......  .+.+....++.++.++.+|++|.+++.+++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSDSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999976 555555431110  111111112345788999999999999988752     79


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc--cC--------
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY--HE--------  181 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~--------  181 (216)
                      |++||+||.....  ...+..++.+++|+.++.++++++.++|.+.....+...++|++||...+-..  +.        
T Consensus        75 d~vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (352)
T PRK10084         75 DAVMHLAAESHVD--RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEEL  152 (352)
T ss_pred             CEEEECCcccCCc--chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccC
Confidence            9999999975321  12234567899999999999999998764321000123489999985433211  10        


Q ss_pred             -CccCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          182 -GIRFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       182 -~~~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                       ....+....+...|+.||.+.+.+++.+.
T Consensus       153 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  182 (352)
T PRK10084        153 PLFTETTAYAPSSPYSASKASSDHLVRAWL  182 (352)
T ss_pred             CCccccCCCCCCChhHHHHHHHHHHHHHHH
Confidence             11223445667799999999999887764

>PLN02583 cinnamoyl-CoA reductase

Probab=99.73  E-value=3.7e-16  Score=129.46  Aligned_cols=160  Identities=13%  Similarity=-0.011  Sum_probs=111.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc--hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++|++|||||+|+||.+++++|+++|++|+++.|+.+.  .......+...  +.++.++.+|++|.+++.+++.     
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc-----
Confidence            46899999999999999999999999999999986432  11222222111  3468889999999998876654     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc-cC---Cc
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-HE---GI  183 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~---~~  183 (216)
                        +.|.++|.++....   .. .++++++++|+.+++++++++.+.+.        .++||++||..+.... +.   ..
T Consensus        78 --~~d~v~~~~~~~~~---~~-~~~~~~~~~nv~gt~~ll~aa~~~~~--------v~riV~~SS~~a~~~~~~~~~~~~  143 (297)
T PLN02583         78 --GCSGLFCCFDPPSD---YP-SYDEKMVDVEVRAAHNVLEACAQTDT--------IEKVVFTSSLTAVIWRDDNISTQK  143 (297)
T ss_pred             --CCCEEEEeCccCCc---cc-ccHHHHHHHHHHHHHHHHHHHHhcCC--------ccEEEEecchHheecccccCCCCC
Confidence              57888987764321   11 24678999999999999999987642        3589999998775422 11   11


Q ss_pred             cCC--CCCCC------CccchHHHHHHHHHHHHHH
Q 027991          184 RFD--KINDP------SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ~~~--~~~~~------~~~Y~~ska~~~~l~~~~~  210 (216)
                      .++  .+..+      ...|+.||...+.+...+.
T Consensus       144 ~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~  178 (297)
T PLN02583        144 DVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALA  178 (297)
T ss_pred             CCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHH
Confidence            111  11111      1259999999998876553

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.72  E-value=4.2e-16  Score=137.19  Aligned_cols=129  Identities=21%  Similarity=0.232  Sum_probs=102.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc-------CCCeEEEEEccCCCHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-------PSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      ..+||++|||||+|+||.+++++|+++|++|++++|+.++++...+++....       ...++.++.+|++|.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            3578999999999999999999999999999999999887766655443210       123588999999999887664


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      +       +++|+||||+|....    ...++...+++|+.+..++++++.+.         +.++||++||.++.
T Consensus       157 L-------ggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a---------gVgRIV~VSSiga~  212 (576)
T PLN03209        157 L-------GNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA---------KVNHFILVTSLGTN  212 (576)
T ss_pred             h-------cCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh---------CCCEEEEEccchhc
Confidence            4       579999999997531    12246778999999999999888654         35799999998764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.72  E-value=3.8e-16  Score=129.50  Aligned_cols=160  Identities=16%  Similarity=0.113  Sum_probs=114.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcch-HHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAG-KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +++||||+|+||.+++++|+++|  ++|++.+|..... .+..+.+.   ...++.++.+|++|++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999988  6898887643211 11111121   1236788999999999999888753     


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~  187 (216)
                      ++|++||+|+....  +.+.+.+...+++|+.++..+++++.+.+.        +.++|++||...+.+...  ......
T Consensus        73 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------~~~~i~~Ss~~v~g~~~~~~~~~e~~  142 (317)
T TIGR01181        73 QPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH--------EFRFHHISTDEVYGDLEKGDAFTETT  142 (317)
T ss_pred             CCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEeeccceeCCCCCCCCcCCCC
Confidence            58999999997532  224456678899999999999998876643        237999998543322211  122334


Q ss_pred             CCCCCccchHHHHHHHHHHHHHH
Q 027991          188 INDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...+...|+.+|.+.+.+++.+.
T Consensus       143 ~~~~~~~Y~~sK~~~e~~~~~~~  165 (317)
T TIGR01181       143 PLAPSSPYSASKAASDHLVRAYH  165 (317)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHH
Confidence            45566789999999999987764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.72  E-value=2.5e-17  Score=134.00  Aligned_cols=149  Identities=22%  Similarity=0.279  Sum_probs=110.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEE----EEEccCCCHHHHHHHHHHHHhhc
Q 027991           34 AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVD----AMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +|||||+|.||.++++++++.+. +|+++++++.++-+...+++..+++.++.    .+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999995 79999999999888888887766554443    4578999999999988764    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                       ++|+++|.|+.-+-+  ..+....+.+++|+.|+.++++++..+-.         .++|++|+-=+             
T Consensus        77 -~pdiVfHaAA~KhVp--l~E~~p~eav~tNv~GT~nv~~aa~~~~v---------~~~v~ISTDKA-------------  131 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP--LMEDNPFEAVKTNVLGTQNVAEAAIEHGV---------ERFVFISTDKA-------------  131 (293)
T ss_dssp             -T-SEEEE------HH--HHCCCHHHHHHHHCHHHHHHHHHHHHTT----------SEEEEEEECGC-------------
T ss_pred             -CCCEEEEChhcCCCC--hHHhCHHHHHHHHHHHHHHHHHHHHHcCC---------CEEEEcccccc-------------
Confidence             799999999985421  23345678899999999999999988743         38999998533             


Q ss_pred             CCCCccchHHHHHHHHHHHHHHh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      -.|...||+||..-+.+.+.+..
T Consensus       132 v~PtnvmGatKrlaE~l~~~~~~  154 (293)
T PF02719_consen  132 VNPTNVMGATKRLAEKLVQAANQ  154 (293)
T ss_dssp             SS--SHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHhh
Confidence            33556899999999999887654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.71  E-value=2e-15  Score=127.04  Aligned_cols=166  Identities=11%  Similarity=-0.015  Sum_probs=114.8

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCeEEEEEcCCcchH------------HHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           29 GSGLTAIVTGATSGIGTE--TARVLALRGVHVVMGVRDIAAGK------------DVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~--~a~~l~~~g~~Vi~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      ..+|++||||+++|||.+  +|+.| .+|++|+++++..+..+            ...+.+. +. +.....+.||++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~-G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AA-GLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hc-CCceEEEEcCCCCH
Confidence            457999999999999999  89999 99999888875432211            2222232 22 45677899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCCCCC------------------------------------CCChHHHHHHHHH
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIMGTPF------------------------------------MLSKDNIELQFAT  138 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~------------------------------------~~~~~~~~~~~~~  138 (216)
                      ++++++++++.+.+|+||+||||+|......                                    ..+.++++.++++
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~v  195 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKV  195 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHh
Confidence            9999999999999999999999999752100                                    1234455555444


Q ss_pred             HHh-HHHHHHHH--HHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          139 NHL-GHFLLTNL--LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       139 N~~-~~~~l~~~--~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .-. .....+++  ..++|.       .++++|.+|+..+....|.+   ..     ..-|..|++++..++.+...
T Consensus       196 Mggedw~~Wi~al~~a~lla-------~g~~~va~TY~G~~~t~p~Y---~~-----g~mG~AKa~LE~~~r~La~~  257 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVLA-------EGAKTVAYSYIGPELTHPIY---WD-----GTIGKAKKDLDRTALALNEK  257 (398)
T ss_pred             hccchHHHHHHHHHhccccc-------CCcEEEEEecCCcceeeccc---CC-----chHHHHHHHHHHHHHHHHHH
Confidence            333 22334433  334443       47899999987776654332   10     13389999999988887653

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.70  E-value=1.1e-15  Score=125.65  Aligned_cols=130  Identities=18%  Similarity=0.109  Sum_probs=105.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH--HHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV--KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+||||+|.||..+++.|+++|++|..+.|++++.+..  ...+..  ...++..+..|++|++++++.++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~--a~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG--AKERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc--CcccceEEeccccccchHHHHHh-----
Confidence            678999999999999999999999999999999998874432  233322  24569999999999999999998     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                        +.|.++|.|.+..+....   .-.+.++.++.|+.++++++.+.=.        --|||++||.++..+.
T Consensus        78 --gcdgVfH~Asp~~~~~~~---~e~~li~pav~Gt~nVL~ac~~~~s--------VkrvV~TSS~aAv~~~  136 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDFDLED---PEKELIDPAVKGTKNVLEACKKTKS--------VKRVVYTSSTAAVRYN  136 (327)
T ss_pred             --CCCEEEEeCccCCCCCCC---cHHhhhhHHHHHHHHHHHHHhccCC--------cceEEEeccHHHhccC
Confidence              689999999986432211   2236899999999999999987741        2489999999988765

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.69  E-value=1.7e-15  Score=126.17  Aligned_cols=158  Identities=22%  Similarity=0.208  Sum_probs=113.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||..++++|+++|++|++.++..............   ..++.++.+|+++++++.++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            479999999999999999999999999887654332222222211   11577889999999999988874     3799


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--ccCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--IRFDKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~~~~~~~  190 (216)
                      ++||+||......  ..++..+.+++|+.++..+++++.+.         +.+++|++||...+ +.+..  ...+....
T Consensus        73 ~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~ss~~~~-g~~~~~~~~e~~~~~  140 (328)
T TIGR01179        73 AVIHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQQT---------GVKKFIFSSSAAVY-GEPSSIPISEDSPLG  140 (328)
T ss_pred             EEEECccccCcch--hhcCchhhhhhhHHHHHHHHHHHHhc---------CCCEEEEecchhhc-CCCCCCCccccCCCC
Confidence            9999999753221  33445678899999999998876432         24589998886433 33322  22234445


Q ss_pred             CCccchHHHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +...|+.+|++.+.+++.+.
T Consensus       141 ~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179       141 PINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             CCCchHHHHHHHHHHHHHHH
Confidence            66789999999998887764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.69  E-value=1.1e-15  Score=122.72  Aligned_cols=162  Identities=20%  Similarity=0.157  Sum_probs=128.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|||||+|+||..+++.+..+..  +|+.++.-. ..-.+....+.   ..++..+++.|+.|.+.+.+++++-    
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~~~~----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELVDRLFKEY----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHHHHHHHhc----
Confidence            4689999999999999999998874  467776432 11112222222   2568999999999999999998864    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC--Cccccccc-CCccC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS--EGHRLAYH-EGIRF  185 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS--~~~~~~~~-~~~~~  185 (216)
                       .+|+++|-|+=++  .+.+..+....+++|+.|++.+++++..+..+        -+++.||.  ++|.++.. .....
T Consensus        74 -~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~--------frf~HISTDEVYG~l~~~~~~FtE  142 (340)
T COG1088          74 -QPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK--------FRFHHISTDEVYGDLGLDDDAFTE  142 (340)
T ss_pred             -CCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhccc--------ceEEEeccccccccccCCCCCccc
Confidence             6899999998653  66677788889999999999999999998642        27899998  66766653 34556


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .++.+|.+.|.+|||+..+|++.+..
T Consensus       143 ~tp~~PsSPYSASKAasD~lVray~~  168 (340)
T COG1088         143 TTPYNPSSPYSASKAASDLLVRAYVR  168 (340)
T ss_pred             CCCCCCCCCcchhhhhHHHHHHHHHH
Confidence            78999999999999999999998764

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.66  E-value=5.3e-15  Score=123.39  Aligned_cols=152  Identities=23%  Similarity=0.214  Sum_probs=111.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++++||||+|+||..+++.|+++|++|++++|+.+.....        ....+.++.+|++|.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL--------EGLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc--------ccCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            3689999999999999999999999999999986643211        12357889999999998888775       57


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--ccCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--IRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~~~~~~  189 (216)
                      |++||+|+....    ..+++.+.+++|+.++..+++++.+.         +.+++|++||...+.+.+..  ...+.+.
T Consensus        66 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~~~~e~~~~  132 (328)
T TIGR03466        66 RALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA---------GVERVVYTSSVATLGVRGDGTPADETTPS  132 (328)
T ss_pred             CEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEechhhcCcCCCCCCcCccCCC
Confidence            999999986421    22345678999999999999887643         34589999997655422211  1222222


Q ss_pred             CC---CccchHHHHHHHHHHHHHHh
Q 027991          190 DP---SGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       190 ~~---~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .+   ...|+.+|.+.+.+.+.+..
T Consensus       133 ~~~~~~~~Y~~sK~~~e~~~~~~~~  157 (328)
T TIGR03466       133 SLDDMIGHYKRSKFLAEQAALEMAA  157 (328)
T ss_pred             CcccccChHHHHHHHHHHHHHHHHH
Confidence            22   34799999999988877643

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.64  E-value=8.1e-15  Score=121.56  Aligned_cols=139  Identities=14%  Similarity=0.115  Sum_probs=105.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|.||.+++++|.++| +|+.++|...                   .+..|++|.+.+.++++..     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999 7888877521                   2357999999998888753     589


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC--CCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~--~~~~~  190 (216)
                      ++||+|+.....  ...++....+++|+.++.++++++...          +.++|++||..-+-+ ....+|  +++..
T Consensus        57 ~Vih~Aa~~~~~--~~~~~~~~~~~~N~~~~~~l~~aa~~~----------g~~~v~~Ss~~Vy~~-~~~~p~~E~~~~~  123 (299)
T PRK09987         57 VIVNAAAHTAVD--KAESEPEFAQLLNATSVEAIAKAANEV----------GAWVVHYSTDYVFPG-TGDIPWQETDATA  123 (299)
T ss_pred             EEEECCccCCcc--hhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEccceEECC-CCCCCcCCCCCCC
Confidence            999999986432  233344667889999999999887654          237899988654433 222233  55667


Q ss_pred             CCccchHHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~  209 (216)
                      |...|+.||.+.+.+++.+
T Consensus       124 P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987        124 PLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             CCCHHHHHHHHHHHHHHHh
Confidence            7889999999999887654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.64  E-value=5e-15  Score=121.69  Aligned_cols=151  Identities=17%  Similarity=0.110  Sum_probs=110.4

Q ss_pred             EEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           35 IVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        35 lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      |||||+|.||..++++|+++|  .+|.+.++.......  ..+..   .....++.+|++|++++.++++       +.|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  789888887654221  11111   1233489999999999999887       679


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccC----C-
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRF----D-  186 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~----~-  186 (216)
                      ++||.|++.....   ....++++++|+.|+-++++++...         +-.++|++||.....+... ..-+    . 
T Consensus        69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~---------~VkrlVytSS~~vv~~~~~~~~~~~~dE~~  136 (280)
T PF01073_consen   69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA---------GVKRLVYTSSISVVFDNYKGDPIINGDEDT  136 (280)
T ss_pred             eEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcCcceeEeccCCCCcccCCcCC
Confidence            9999999864332   3445779999999999999999765         2448999999887765221 1111    1 


Q ss_pred             -CCCCCCccchHHHHHHHHHHHHH
Q 027991          187 -KINDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       187 -~~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                       ........|+.||+.-+.+....
T Consensus       137 ~~~~~~~~~Y~~SK~~AE~~V~~a  160 (280)
T PF01073_consen  137 PYPSSPLDPYAESKALAEKAVLEA  160 (280)
T ss_pred             cccccccCchHHHHHHHHHHHHhh
Confidence             11224558999999988876543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=99.64  E-value=1.2e-14  Score=124.65  Aligned_cols=161  Identities=14%  Similarity=0.037  Sum_probs=107.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.+++|||||+|.||..++++|+++ |++|++++|+.++.....+..... ...++.++.+|++|.+.+.++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP-WSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccccc-CCCCeEEEEcCCCChHHHHHHhh-----
Confidence            45568999999999999999999998 589999998765433221110000 12368899999999998887775     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-C-CccC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-E-GIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~-~~~~  185 (216)
                        ++|++||+|+...+..  ...+..+.+..|+.++.++++++...          +.++|++||... +|.. + ....
T Consensus        86 --~~d~ViHlAa~~~~~~--~~~~~~~~~~~n~~gt~~ll~aa~~~----------~~r~v~~SS~~v-Yg~~~~~~~~e  150 (386)
T PLN02427         86 --MADLTINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCSEN----------NKRLIHFSTCEV-YGKTIGSFLPK  150 (386)
T ss_pred             --cCCEEEEcccccChhh--hhhChHHHHHHHHHHHHHHHHHHHhc----------CCEEEEEeeeee-eCCCcCCCCCc
Confidence              4799999999754321  11222345678999999888876432          248999999643 3321 1 0000


Q ss_pred             CCC----------------------CCCCccchHHHHHHHHHHHHHH
Q 027991          186 DKI----------------------NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 ~~~----------------------~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +.+                      ..+...|+.||.+.+.++..+.
T Consensus       151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  197 (386)
T PLN02427        151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEG  197 (386)
T ss_pred             ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHH
Confidence            100                      1223479999999998887653

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.64  E-value=7.8e-15  Score=119.32  Aligned_cols=163  Identities=18%  Similarity=0.181  Sum_probs=128.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++.||||||+|.||.+.+.+|+++|+.|+++|+-.+.........++..+ +..+.+...|+.|.+.++++|++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            57899999999999999999999999999999877666555555555542 468999999999999999999986     


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC--CC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~--~~  187 (216)
                      .+|.++|-|+...-  ..+.++..++.+.|..|+++++..+..+-.         ..+|+.|| ++.+|.|.-.+.  +.
T Consensus        77 ~fd~V~Hfa~~~~v--geS~~~p~~Y~~nNi~gtlnlLe~~~~~~~---------~~~V~sss-atvYG~p~~ip~te~~  144 (343)
T KOG1371|consen   77 KFDAVMHFAALAAV--GESMENPLSYYHNNIAGTLNLLEVMKAHNV---------KALVFSSS-ATVYGLPTKVPITEED  144 (343)
T ss_pred             CCceEEeehhhhcc--chhhhCchhheehhhhhHHHHHHHHHHcCC---------ceEEEecc-eeeecCcceeeccCcC
Confidence            69999999997532  235666688999999999999998877742         25565554 566666554433  33


Q ss_pred             CCC-CCccchHHHHHHHHHHHHHH
Q 027991          188 IND-PSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       188 ~~~-~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ... |...|+.+|.+++.+++.+.
T Consensus       145 ~t~~p~~pyg~tK~~iE~i~~d~~  168 (343)
T KOG1371|consen  145 PTDQPTNPYGKTKKAIEEIIHDYN  168 (343)
T ss_pred             CCCCCCCcchhhhHHHHHHHHhhh
Confidence            343 78899999999998887654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.63  E-value=2.2e-14  Score=114.22  Aligned_cols=154  Identities=21%  Similarity=0.166  Sum_probs=117.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      ||||||+|.||.+++++|+++|+.|+...|+..........       .++.++.+|+.|.+.++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence            69999999999999999999999998888876653322211       26889999999999999999876     7999


Q ss_pred             EEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCCCCCCC
Q 027991          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDKINDP  191 (216)
Q Consensus       114 li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~~~~~  191 (216)
                      +||.|+...  ...+.+.....++.|+.++..+++.+...         +..++|++||. +.++.+.  ....+....+
T Consensus        69 vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~i~~sS~-~~y~~~~~~~~~e~~~~~~  136 (236)
T PF01370_consen   69 VIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREA---------GVKRFIFLSSA-SVYGDPDGEPIDEDSPINP  136 (236)
T ss_dssp             EEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHH---------TTSEEEEEEEG-GGGTSSSSSSBETTSGCCH
T ss_pred             EEEeecccc--ccccccccccccccccccccccccccccc---------ccccccccccc-ccccccccccccccccccc
Confidence            999999853  11233566788889998888888888765         34589999994 4444332  2233444566


Q ss_pred             CccchHHHHHHHHHHHHHHh
Q 027991          192 SGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ...|+.+|...+.+...+..
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~  156 (236)
T PF01370_consen  137 LSPYGASKRAAEELLRDYAK  156 (236)
T ss_dssp             SSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccc
Confidence            77899999999988877653

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02686 cinnamoyl-CoA reductase

Probab=99.62  E-value=2.3e-14  Score=122.08  Aligned_cols=167  Identities=11%  Similarity=-0.025  Sum_probs=112.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc----CCCeEEEEEccCCCHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ....++|++|||||+|+||.+++++|+++|++|+++.|+.+..+.. +++....    ....+.++.+|++|.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            4557789999999999999999999999999999888876544333 2221100    0125788999999999998888


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc-ccccc-
Q 027991          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG-HRLAY-  179 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~~-  179 (216)
                      +       .+|.+||.|+...+.....  ......++|+.++.++++++...-        .-.++|++||.+ ..++. 
T Consensus       127 ~-------~~d~V~hlA~~~~~~~~~~--~~~~~~~~nv~gt~~llea~~~~~--------~v~r~V~~SS~~~~vyg~~  189 (367)
T PLN02686        127 D-------GCAGVFHTSAFVDPAGLSG--YTKSMAELEAKASENVIEACVRTE--------SVRKCVFTSSLLACVWRQN  189 (367)
T ss_pred             H-------hccEEEecCeeeccccccc--ccchhhhhhHHHHHHHHHHHHhcC--------CccEEEEeccHHHhccccc
Confidence            6       3689999998753322111  112456788999999888876431        133899999964 22221 


Q ss_pred             -cCC----ccC------CCCCCCCccchHHHHHHHHHHHHHH
Q 027991          180 -HEG----IRF------DKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       180 -~~~----~~~------~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                       +..    ...      +....+...|+.||.+.+.++..+.
T Consensus       190 ~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~  231 (367)
T PLN02686        190 YPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAA  231 (367)
T ss_pred             CCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHH
Confidence             111    111      1122344579999999999987654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.60  E-value=4.1e-14  Score=114.67  Aligned_cols=135  Identities=21%  Similarity=0.236  Sum_probs=116.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      +||||++|-+|.+|++.|. .+++|+.+++..                       +|++|++.+.+++++.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999999 668999887763                       7999999999999987     7999


Q ss_pred             EEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCCCCCC
Q 027991          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKINDPS  192 (216)
Q Consensus       114 li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~~~~~  192 (216)
                      +||+|++.  ..+..+.+.+..+.+|..++.++.+++...          +..+|++|+-+-+.|..+ ....++..+|.
T Consensus        54 VIn~AAyt--~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~----------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~  121 (281)
T COG1091          54 VINAAAYT--AVDKAESEPELAFAVNATGAENLARAAAEV----------GARLVHISTDYVFDGEKGGPYKETDTPNPL  121 (281)
T ss_pred             EEECcccc--ccccccCCHHHHHHhHHHHHHHHHHHHHHh----------CCeEEEeecceEecCCCCCCCCCCCCCCCh
Confidence            99999985  344456667889999999999999999776          558999999998888774 35567889999


Q ss_pred             ccchHHHHHHHHHHHHH
Q 027991          193 GSFQSSALLLLLLLHLL  209 (216)
Q Consensus       193 ~~Y~~ska~~~~l~~~~  209 (216)
                      ..||.||.+.+...+..
T Consensus       122 nvYG~sKl~GE~~v~~~  138 (281)
T COG1091         122 NVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             hhhhHHHHHHHHHHHHh
Confidence            99999999999877654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.59  E-value=5.5e-14  Score=118.75  Aligned_cols=152  Identities=10%  Similarity=0.082  Sum_probs=105.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC-CHHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~~~  109 (216)
                      +++|||||+|.||..++++|++. |++|+.++|+.+...    .+   .+...+.++.+|++ +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~---~~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DL---VNHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hh---ccCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            46999999999999999999986 689999998654322    11   12345889999998 6666555443       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC--CC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~--~~  187 (216)
                      ++|++||.|+...+..  ..++....+++|+.++.++++++...         + .++|++||... ++......+  +.
T Consensus        68 ~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~~---------~-~~~v~~SS~~v-yg~~~~~~~~ee~  134 (347)
T PRK11908         68 KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVKY---------G-KHLVFPSTSEV-YGMCPDEEFDPEA  134 (347)
T ss_pred             CCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHhc---------C-CeEEEEeccee-eccCCCcCcCccc
Confidence            5899999999754322  22344567899999999888877532         2 48999999754 332211111  11


Q ss_pred             C-------CCCCccchHHHHHHHHHHHHHH
Q 027991          188 I-------NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       188 ~-------~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .       ..+...|+.||.+.+.+...+.
T Consensus       135 ~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~  164 (347)
T PRK11908        135 SPLVYGPINKPRWIYACSKQLMDRVIWAYG  164 (347)
T ss_pred             cccccCcCCCccchHHHHHHHHHHHHHHHH
Confidence            1       1345579999999988877654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.59  E-value=1.1e-13  Score=126.55  Aligned_cols=164  Identities=15%  Similarity=0.045  Sum_probs=113.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++|++|||||+|.||..+++.|+++  |++|+..++.... .+. ..+.......++.++.+|++|.+.+.+++..   
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT---   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence            45689999999999999999999998  5789988875311 111 1111111134688999999998887766543   


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC----
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG----  182 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  182 (216)
                        .++|++||+|+.....  .+..+..+.+++|+.++..+++++...-        ...++|++||...+ +.+..    
T Consensus        79 --~~~D~ViHlAa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--------~vkr~I~~SS~~vy-g~~~~~~~~  145 (668)
T PLN02260         79 --EGIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYGTHVLLEACKVTG--------QIRRFIHVSTDEVY-GETDEDADV  145 (668)
T ss_pred             --cCCCEEEECCCccCch--hhhhCHHHHHHHHHHHHHHHHHHHHhcC--------CCcEEEEEcchHHh-CCCcccccc
Confidence              3799999999985422  1233445678999999999988875431        13589999996433 22211    


Q ss_pred             -ccCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          183 -IRFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       183 -~~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                       ...+....+...|+.||.+.+.+++.+.
T Consensus       146 ~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~  174 (668)
T PLN02260        146 GNHEASQLLPTNPYSATKAGAEMLVMAYG  174 (668)
T ss_pred             CccccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence             1223344466789999999998887654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.59  E-value=4.9e-14  Score=128.50  Aligned_cols=155  Identities=14%  Similarity=0.060  Sum_probs=108.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHH-HHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~~~~~  106 (216)
                      .+++++|||||+|.||..++++|+++ |++|+.++|.......    +   .+..++.++.+|++|.+. ++++++    
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~---~~~~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----F---LGHPRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----h---cCCCceEEEeccccCcHHHHHHHhc----
Confidence            35678999999999999999999986 7999999987643221    1   113468889999998665 344443    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC-
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF-  185 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~-  185 (216)
                         ++|++||.|+...+..  ..++..+.+++|+.++..+++++...         + .++|++||... ++......+ 
T Consensus       382 ---~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~a~~~~---------~-~~~V~~SS~~v-yg~~~~~~~~  445 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIRYCVKY---------N-KRIIFPSTSEV-YGMCTDKYFD  445 (660)
T ss_pred             ---CCCEEEECccccCchh--hccCHHHHHHhhHHHHHHHHHHHHhc---------C-CeEEEEcchhh-cCCCCCCCcC
Confidence               6899999999865422  22334567899999999999888653         2 37999999643 332221112 


Q ss_pred             -CCC-------CCCCccchHHHHHHHHHHHHHH
Q 027991          186 -DKI-------NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 -~~~-------~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                       +.+       ..+...|+.||.+.+.++..+.
T Consensus       446 E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~  478 (660)
T PRK08125        446 EDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG  478 (660)
T ss_pred             ccccccccCCCCCCccchHHHHHHHHHHHHHHH
Confidence             111       1234579999999998887764

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.58  E-value=9.1e-14  Score=115.18  Aligned_cols=153  Identities=21%  Similarity=0.105  Sum_probs=112.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      +|||||+|.||..++++|.++|++|+.++|...+.....         ..+.++.+|+++.+...+..+..     . |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-DA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-CE
Confidence            999999999999999999999999999999876543221         34778999999986655555432     1 99


Q ss_pred             EEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc-cC-CccCC-CCCC
Q 027991          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-HE-GIRFD-KIND  190 (216)
Q Consensus       114 li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~-~~~~~-~~~~  190 (216)
                      +||+|+.......... +....+++|+.++.++++++...         +..++|+.||.+...+. +. ....+ .+..
T Consensus        68 vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~~---------~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~  137 (314)
T COG0451          68 VIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARAA---------GVKRFVFASSVSVVYGDPPPLPIDEDLGPPR  137 (314)
T ss_pred             EEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeCCCceECCCCCCCCcccccCCCC
Confidence            9999998643332222 55678999999999999999772         34588886665545443 11 22223 3444


Q ss_pred             CCccchHHHHHHHHHHHHHHh
Q 027991          191 PSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +...|+.||.+.+.+++...+
T Consensus       138 p~~~Yg~sK~~~E~~~~~~~~  158 (314)
T COG0451         138 PLNPYGVSKLAAEQLLRAYAR  158 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHHHH
Confidence            544799999999999887764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.58  E-value=7.4e-14  Score=114.67  Aligned_cols=137  Identities=20%  Similarity=0.221  Sum_probs=102.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||.+++++|.++|++|++++|+                       .+|+.+.+.+.++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            37999999999999999999999999998874                       36999999999888753     589


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKINDP  191 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~~~~  191 (216)
                      ++||+||.....  .........+++|+.++..+++++...          +.++|++||.+.+.+... ....+....+
T Consensus        53 ~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~  120 (287)
T TIGR01214        53 AVVNTAAYTDVD--GAESDPEKAFAVNALAPQNLARAAARH----------GARLVHISTDYVFDGEGKRPYREDDATNP  120 (287)
T ss_pred             EEEECCcccccc--ccccCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEeeeeeecCCCCCCCCCCCCCCC
Confidence            999999975321  122345667899999999999887432          238999998654332111 1223344556


Q ss_pred             CccchHHHHHHHHHHHHH
Q 027991          192 SGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~~~  209 (216)
                      ...|+.+|...+.+++.+
T Consensus       121 ~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214       121 LNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             cchhhHHHHHHHHHHHHh
Confidence            778999999988877654

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.58  E-value=9e-14  Score=119.35  Aligned_cols=147  Identities=19%  Similarity=0.156  Sum_probs=104.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH--HHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .+.++++++||||+|+||..++++|+++|++|++++|+..+.+.  ..++....  ...+.++.+|++|++++.++++..
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~  133 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE  133 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh
Confidence            44567899999999999999999999999999999998754321  11112222  235789999999999999988754


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .   .++|++||+++.....   .    .+.+++|+.++.++++++...         +.+++|++||.....       
T Consensus       134 ~---~~~D~Vi~~aa~~~~~---~----~~~~~vn~~~~~~ll~aa~~~---------gv~r~V~iSS~~v~~-------  187 (390)
T PLN02657        134 G---DPVDVVVSCLASRTGG---V----KDSWKIDYQATKNSLDAGREV---------GAKHFVLLSAICVQK-------  187 (390)
T ss_pred             C---CCCcEEEECCccCCCC---C----ccchhhHHHHHHHHHHHHHHc---------CCCEEEEEeeccccC-------
Confidence            1   2689999999853211   1    134567888888777776432         346899999975432       


Q ss_pred             CCCCCCCCccchHHHHHHHHHHH
Q 027991          185 FDKINDPSGSFQSSALLLLLLLH  207 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~  207 (216)
                            +...|..+|...+...+
T Consensus       188 ------p~~~~~~sK~~~E~~l~  204 (390)
T PLN02657        188 ------PLLEFQRAKLKFEAELQ  204 (390)
T ss_pred             ------cchHHHHHHHHHHHHHH
Confidence                  23357778877765543

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.58  E-value=2e-13  Score=118.90  Aligned_cols=159  Identities=15%  Similarity=0.108  Sum_probs=108.7

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +....-+++++|||||+|.||..+++.|+++|++|++++|......+.   +.......++.++..|+.++.     +  
T Consensus       112 ~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l--  181 (442)
T PLN02206        112 PLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L--  181 (442)
T ss_pred             ccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h--
Confidence            334445778999999999999999999999999999998754322211   111122346788889987652     1  


Q ss_pred             HHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                           .++|+|||.|+...+..  ...+..+.+++|+.++.++++++...         + .++|++||...+. .+...
T Consensus       182 -----~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~---------g-~r~V~~SS~~VYg-~~~~~  243 (442)
T PLN02206        182 -----LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV---------G-ARFLLTSTSEVYG-DPLQH  243 (442)
T ss_pred             -----cCCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh---------C-CEEEEECChHHhC-CCCCC
Confidence                 15899999999754322  12235678999999999999888543         2 3799999965432 22111


Q ss_pred             cC--C-----CCCCCCccchHHHHHHHHHHHHHH
Q 027991          184 RF--D-----KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ~~--~-----~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +.  +     .+..+...|+.||.+.+.++..+.
T Consensus       244 p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~  277 (442)
T PLN02206        244 PQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYH  277 (442)
T ss_pred             CCCccccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence            11  1     123345689999999998887653

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.57  E-value=2.3e-14  Score=118.12  Aligned_cols=136  Identities=23%  Similarity=0.263  Sum_probs=100.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++||||++|.||.++.+.|.++|++|+.++|.                       .+|++|.+.+.+++++.     ++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence            69999999999999999999999999988665                       57999999999999876     689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-ccCCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKINDP  191 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~~~~~~~~  191 (216)
                      ++||+|++..  .+..+++.+..+.+|+.++..+.+.+...          +.++|++||..-+.|..+. ...++...|
T Consensus        54 ~Vin~aa~~~--~~~ce~~p~~a~~iN~~~~~~la~~~~~~----------~~~li~~STd~VFdG~~~~~y~E~d~~~P  121 (286)
T PF04321_consen   54 VVINCAAYTN--VDACEKNPEEAYAINVDATKNLAEACKER----------GARLIHISTDYVFDGDKGGPYTEDDPPNP  121 (286)
T ss_dssp             EEEE--------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC----------T-EEEEEEEGGGS-SSTSSSB-TTS----
T ss_pred             eEeccceeec--HHhhhhChhhhHHHhhHHHHHHHHHHHHc----------CCcEEEeeccEEEcCCcccccccCCCCCC
Confidence            9999999852  22345667788999999999999988654          4589999998777666333 345677888


Q ss_pred             CccchHHHHHHHHHHHH
Q 027991          192 SGSFQSSALLLLLLLHL  208 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~~  208 (216)
                      ...||.+|+..+...+.
T Consensus       122 ~~~YG~~K~~~E~~v~~  138 (286)
T PF04321_consen  122 LNVYGRSKLEGEQAVRA  138 (286)
T ss_dssp             SSHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            99999999999877665

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.57  E-value=1.1e-13  Score=114.91  Aligned_cols=149  Identities=13%  Similarity=0.097  Sum_probs=103.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           34 AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +|||||+|.||..+++.|.++|+ .|++++|..... . ..++.       ...+..|+++++.++.+.+.   .++++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~~-------~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNLA-------DLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhhh-------heeeeccCcchhHHHHHHhh---ccCCCC
Confidence            58999999999999999999998 788887764321 1 11111       13466788887776665543   345899


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-ccCCCC-CC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFDKI-ND  190 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~~~~~-~~  190 (216)
                      ++||+|+...    ...++....+++|+.++..+++++...          +.++|++||.+. ++.+.. ...+.. ..
T Consensus        69 ~vvh~A~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~v~~SS~~v-y~~~~~~~~e~~~~~~  133 (314)
T TIGR02197        69 AIFHQGACSD----TTETDGEYMMENNYQYSKRLLDWCAEK----------GIPFIYASSAAT-YGDGEAGFREGRELER  133 (314)
T ss_pred             EEEECccccC----ccccchHHHHHHHHHHHHHHHHHHHHh----------CCcEEEEccHHh-cCCCCCCcccccCcCC
Confidence            9999999743    123456778999999999999887643          237999999653 332221 111221 23


Q ss_pred             CCccchHHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~  209 (216)
                      +...|+.||.+.+.+++.+
T Consensus       134 p~~~Y~~sK~~~e~~~~~~  152 (314)
T TIGR02197       134 PLNVYGYSKFLFDQYVRRR  152 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHH
Confidence            6678999999999888753

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.57  E-value=1.1e-13  Score=114.84  Aligned_cols=151  Identities=17%  Similarity=0.219  Sum_probs=100.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh--hcCCc
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--QHHQL  111 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--~~~~i  111 (216)
                      +|||||+|.||.+++++|+++|++++++.++.......            .....+|+.|..+.+++++++.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999766665553321110            01234577776666666655432  34579


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKIND  190 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~~~  190 (216)
                      |++||+|+..... +..   ....++.|+.++.++++++...          +.++|++||.+.+-.... .........
T Consensus        70 d~Vih~A~~~~~~-~~~---~~~~~~~n~~~t~~ll~~~~~~----------~~~~i~~SS~~vyg~~~~~~~~E~~~~~  135 (308)
T PRK11150         70 EAIFHEGACSSTT-EWD---GKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRTDDFIEEREYEK  135 (308)
T ss_pred             cEEEECceecCCc-CCC---hHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEcchHHhCcCCCCCCccCCCCC
Confidence            9999999965322 112   2357899999999998887542          236999998754322111 122233455


Q ss_pred             CCccchHHHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +...|+.||.+.+.+++.+.
T Consensus       136 p~~~Y~~sK~~~E~~~~~~~  155 (308)
T PRK11150        136 PLNVYGYSKFLFDEYVRQIL  155 (308)
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence            66789999999888877664

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.56  E-value=3e-13  Score=115.38  Aligned_cols=156  Identities=16%  Similarity=0.105  Sum_probs=107.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      -+++++|||||+|.||.++++.|.++|++|+.++|......      ...  .....+..+|++|.+.+.++++      
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~--~~~~~~~~~Dl~d~~~~~~~~~------   84 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED--MFCHEFHLVDLRVMENCLKVTK------   84 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc--cccceEEECCCCCHHHHHHHHh------
Confidence            36779999999999999999999999999999998643211      000  1124678899999888766653      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC----cc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG----IR  184 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----~~  184 (216)
                       ++|++||.|+...... ...++....+..|+.++.++++++...         +..++|++||...+ +....    ..
T Consensus        85 -~~D~Vih~Aa~~~~~~-~~~~~~~~~~~~N~~~t~nll~aa~~~---------~vk~~V~~SS~~vY-g~~~~~~~~~~  152 (370)
T PLN02695         85 -GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEAARIN---------GVKRFFYASSACIY-PEFKQLETNVS  152 (370)
T ss_pred             -CCCEEEEcccccCCcc-ccccCchhhHHHHHHHHHHHHHHHHHh---------CCCEEEEeCchhhc-CCccccCcCCC
Confidence             5799999998653211 111123345778999999999887543         23489999986432 22111    01


Q ss_pred             C--C--CCCCCCccchHHHHHHHHHHHHHH
Q 027991          185 F--D--KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       185 ~--~--~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +  +  .+..+...|+.+|.+.+.+++.+.
T Consensus       153 ~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~  182 (370)
T PLN02695        153 LKESDAWPAEPQDAYGLEKLATEELCKHYT  182 (370)
T ss_pred             cCcccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            1  1  145677799999999998887653

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.53  E-value=8.9e-13  Score=114.63  Aligned_cols=157  Identities=15%  Similarity=0.086  Sum_probs=107.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...-+.+++|||||+|.||..+++.|+++|++|++++|......+....+   ....++.++..|+.+..     +    
T Consensus       115 ~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~-----~----  182 (436)
T PLN02166        115 GIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI-----L----  182 (436)
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----c----
Confidence            34445668999999999999999999999999999998643222211111   11346778888987642     1    


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                         .++|+|||.|+...+..  ...+..+.+++|+.++..+++++...          +.++|++||... ++.+...+.
T Consensus       183 ---~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gT~nLleaa~~~----------g~r~V~~SS~~V-Yg~~~~~p~  246 (436)
T PLN02166        183 ---LEVDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRV----------GARFLLTSTSEV-YGDPLEHPQ  246 (436)
T ss_pred             ---cCCCEEEECceeccchh--hccCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECcHHH-hCCCCCCCC
Confidence               25899999999754322  12234678999999999999888654          137999988643 332211111


Q ss_pred             --C-----CCCCCCccchHHHHHHHHHHHHHH
Q 027991          186 --D-----KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 --~-----~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                        +     .+..+...|+.||.+.+.+++.+.
T Consensus       247 ~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~  278 (436)
T PLN02166        247 KETYWGNVNPIGERSCYDEGKRTAETLAMDYH  278 (436)
T ss_pred             CccccccCCCCCCCCchHHHHHHHHHHHHHHH
Confidence              1     233456689999999998887664

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.51  E-value=1.1e-12  Score=110.71  Aligned_cols=157  Identities=19%  Similarity=0.167  Sum_probs=104.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcch---HHHHHHHHhhc------CCCeEEEEEccCCCHH------
Q 027991           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAG---KDVKETIVKEI------PSAKVDAMELDLSSLA------   95 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~---~~~~~~~~~~~------~~~~~~~~~~Dv~~~~------   95 (216)
                      +++||||+|+||.+++++|+++|  ++|+++.|+.+..   +...+.+....      ...++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  6799999986532   12222222110      0147899999998652      


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991           96 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ...++.       .++|++||+|+.....     ..+...+++|+.++..+++.+...         +..+++++||...
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~~---------~~~~~v~iSS~~v  139 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAASG---------RAKPLHYVSTISV  139 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhhC---------CCceEEEEccccc
Confidence            333222       3689999999975322     234667889999999998877543         2336999999766


Q ss_pred             cccccCCc-cCCC-----CCCCCccchHHHHHHHHHHHHHH
Q 027991          176 RLAYHEGI-RFDK-----INDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       176 ~~~~~~~~-~~~~-----~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ........ ..+.     .......|+.||.+.+.+.+...
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  180 (367)
T TIGR01746       140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS  180 (367)
T ss_pred             cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH
Confidence            54321110 1111     11223479999999998876653

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.50  E-value=1.9e-12  Score=107.32  Aligned_cols=138  Identities=18%  Similarity=0.182  Sum_probs=93.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +++|||||+|.||..+++.|.++|++|++..                          .|+++.+.+...++..     ++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----CC
Confidence            5799999999999999999999999886421                          2344555555555432     68


Q ss_pred             cEEEECCccCCCC-CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc--cccc-ccC--CccC
Q 027991          112 NILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG--HRLA-YHE--GIRF  185 (216)
Q Consensus       112 d~li~~Ag~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~--~~~~-~~~--~~~~  185 (216)
                      |++||+||..+.. .+...++..+.+++|+.++.++++++...-         - +.+++||..  +... .|.  ...+
T Consensus        59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g---------v-~~v~~sS~~vy~~~~~~p~~~~~~~  128 (298)
T PLN02778         59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG---------L-VLTNYATGCIFEYDDAHPLGSGIGF  128 (298)
T ss_pred             CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC---------C-CEEEEecceEeCCCCCCCcccCCCC
Confidence            9999999986532 222345667899999999999999986541         2 345555432  2211 110  1112


Q ss_pred             C--C-CCCCCccchHHHHHHHHHHHHHH
Q 027991          186 D--K-INDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 ~--~-~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .  . +..+...|+.||.+.+.+++.+.
T Consensus       129 ~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        129 KEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            2  2 22334689999999999887653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.47  E-value=8.7e-13  Score=109.15  Aligned_cols=138  Identities=14%  Similarity=0.108  Sum_probs=97.3

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccEE
Q 027991           35 IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNIL  114 (216)
Q Consensus        35 lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~l  114 (216)
                      |||||+|.||..+++.|.++|++|+++.+.                      ..+|++|.++++++++..     ++|++
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999987765432                      137999999998887763     68999


Q ss_pred             EECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC--CC----C
Q 027991          115 INNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DK----I  188 (216)
Q Consensus       115 i~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~--~~----~  188 (216)
                      ||+|+....... ..++..+.+++|+.++..+++++...         +..++|++||..- ++.....++  +.    +
T Consensus        54 ih~A~~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~i~~SS~~v-yg~~~~~~~~E~~~~~~~  122 (306)
T PLN02725         54 ILAAAKVGGIHA-NMTYPADFIRENLQIQTNVIDAAYRH---------GVKKLLFLGSSCI-YPKFAPQPIPETALLTGP  122 (306)
T ss_pred             EEeeeeecccch-hhhCcHHHHHHHhHHHHHHHHHHHHc---------CCCeEEEeCceee-cCCCCCCCCCHHHhccCC
Confidence            999997532111 12234567889999999999888654         2458999999653 332211112  11    2


Q ss_pred             CCCCc-cchHHHHHHHHHHHHHH
Q 027991          189 NDPSG-SFQSSALLLLLLLHLLF  210 (216)
Q Consensus       189 ~~~~~-~Y~~ska~~~~l~~~~~  210 (216)
                      ..+.. .|+.||.+.+.+.+.+.
T Consensus       123 ~~p~~~~Y~~sK~~~e~~~~~~~  145 (306)
T PLN02725        123 PEPTNEWYAIAKIAGIKMCQAYR  145 (306)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHH
Confidence            33333 59999999987776543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.46  E-value=2.5e-12  Score=103.96  Aligned_cols=120  Identities=22%  Similarity=0.216  Sum_probs=85.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH-HHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~  107 (216)
                      ..+++++||||+|+||..+++.|+++|++|+++.|+.++.....    ..  +.++.++++|++|. +.+.+.+   .  
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~--~~~~~~~~~Dl~d~~~~l~~~~---~--   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL----PQ--DPSLQIVRADVTEGSDKLVEAI---G--   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc----cc--CCceEEEEeeCCCCHHHHHHHh---h--
Confidence            44689999999999999999999999999999999866533211    11  24688899999984 3332222   1  


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                       .++|++|+++|.......      ...+++|..++..+++++.    +.     +.++||++||.+.
T Consensus        84 -~~~d~vi~~~g~~~~~~~------~~~~~~n~~~~~~ll~a~~----~~-----~~~~iV~iSS~~v  135 (251)
T PLN00141         84 -DDSDAVICATGFRRSFDP------FAPWKVDNFGTVNLVEACR----KA-----GVTRFILVSSILV  135 (251)
T ss_pred             -cCCCEEEECCCCCcCCCC------CCceeeehHHHHHHHHHHH----Hc-----CCCEEEEEccccc
Confidence             268999999987421111      1124678888888888864    22     4579999999764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.41  E-value=1.4e-11  Score=112.42  Aligned_cols=156  Identities=20%  Similarity=0.101  Sum_probs=102.9

Q ss_pred             EEEEeCCCCchHHHHHHHHH--HcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHH--HHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLA--LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV--RNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~--~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~--~~~~~~~~~~~  108 (216)
                      ++|||||+|.||.++++.|+  .+|++|++++|+... .. .+.+.......++.++.+|++|++..  .+.++++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  589999999996432 21 22222222225688999999985310  1112222    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC--
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD--  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~--  186 (216)
                      .++|++||+||......     ...+..++|+.++..+++++...         +..++|++||....-...+.....  
T Consensus        76 ~~~D~Vih~Aa~~~~~~-----~~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~~SS~~v~g~~~~~~~e~~~  141 (657)
T PRK07201         76 GDIDHVVHLAAIYDLTA-----DEEAQRAANVDGTRNVVELAERL---------QAATFHHVSSIAVAGDYEGVFREDDF  141 (657)
T ss_pred             cCCCEEEECceeecCCC-----CHHHHHHHHhHHHHHHHHHHHhc---------CCCeEEEEeccccccCccCccccccc
Confidence            37899999999753221     23456789999998888876543         245899999865542222211111  


Q ss_pred             -CCCCCCccchHHHHHHHHHHHH
Q 027991          187 -KINDPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       187 -~~~~~~~~Y~~ska~~~~l~~~  208 (216)
                       ........|+.||...+.+.+.
T Consensus       142 ~~~~~~~~~Y~~sK~~~E~~~~~  164 (657)
T PRK07201        142 DEGQGLPTPYHRTKFEAEKLVRE  164 (657)
T ss_pred             hhhcCCCCchHHHHHHHHHHHHH
Confidence             1122345799999999987753

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.40  E-value=8.1e-12  Score=104.38  Aligned_cols=132  Identities=16%  Similarity=0.088  Sum_probs=94.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++||||+|.||..++++|+++|++|++..|+.++...    +.    ...+.++.+|++|++++.++++       ++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            69999999999999999999999999999998643221    11    2357889999999998877775       689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  192 (216)
                      ++||.++...       .+.....++|+.++.++++++...         +-.++|++||..+..       |     +.
T Consensus        67 ~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~~---------gvkr~I~~Ss~~~~~-------~-----~~  118 (317)
T CHL00194         67 AIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKAA---------KIKRFIFFSILNAEQ-------Y-----PY  118 (317)
T ss_pred             EEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHHc---------CCCEEEEeccccccc-------c-----CC
Confidence            9999876421       112345678888888888877654         234899999853211       1     11


Q ss_pred             ccchHHHHHHHHHHH
Q 027991          193 GSFQSSALLLLLLLH  207 (216)
Q Consensus       193 ~~Y~~ska~~~~l~~  207 (216)
                      ..|..+|...+.+.+
T Consensus       119 ~~~~~~K~~~e~~l~  133 (317)
T CHL00194        119 IPLMKLKSDIEQKLK  133 (317)
T ss_pred             ChHHHHHHHHHHHHH
Confidence            246778877665543

>PLN02996 fatty acyl-CoA reductase

Probab=99.37  E-value=3.6e-11  Score=106.12  Aligned_cols=129  Identities=17%  Similarity=0.162  Sum_probs=89.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC---CeEEEEEcCCcch---HHHHHH---------HHhhcC-------CCeEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAG---KDVKET---------IVKEIP-------SAKVD   85 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g---~~Vi~~~r~~~~~---~~~~~~---------~~~~~~-------~~~~~   85 (216)
                      .+++|+++||||+|.||..++++|+..+   .+|++..|.....   +....+         +...++       ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            3689999999999999999999999865   3678888865321   111111         111111       15789


Q ss_pred             EEEccCCC-------HHHHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Q 027991           86 AMELDLSS-------LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTA  158 (216)
Q Consensus        86 ~~~~Dv~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  158 (216)
                      ++..|+++       .+.++++++       ++|++||+|+.....     +.....+++|+.++..+++.+...-    
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~----  151 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD-----ERYDVALGINTLGALNVLNFAKKCV----  151 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc-----CCHHHHHHHHHHHHHHHHHHHHhcC----
Confidence            99999984       333444443       589999999986422     2457789999999999998876531    


Q ss_pred             ccCCCCcEEEEEcCCccc
Q 027991          159 RKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       159 ~~~~~~g~iv~isS~~~~  176 (216)
                          ...++|++||.+.+
T Consensus       152 ----~~k~~V~vST~~vy  165 (491)
T PLN02996        152 ----KVKMLLHVSTAYVC  165 (491)
T ss_pred             ----CCCeEEEEeeeEEe
Confidence                12379999986543

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.36  E-value=9.5e-12  Score=104.30  Aligned_cols=159  Identities=15%  Similarity=0.059  Sum_probs=112.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++.+++||||+|.+|..++++|.+.+  .+|.+.|........-.+....  ...++..+++|+.+...+.+.++    
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhhhhhhhhcc----
Confidence            456789999999999999999999999  6899999876432221222211  15689999999999999888776    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--Ccc
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~  184 (216)
                         +. .+||+|....+.  ....+-+..+++|+.|+-++...+...-         ..+.|++||..-..+...  ...
T Consensus        76 ---~~-~Vvh~aa~~~~~--~~~~~~~~~~~vNV~gT~nvi~~c~~~~---------v~~lIYtSs~~Vvf~g~~~~n~~  140 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVPD--FVENDRDLAMRVNVNGTLNVIEACKELG---------VKRLIYTSSAYVVFGGEPIINGD  140 (361)
T ss_pred             ---Cc-eEEEeccccCcc--ccccchhhheeecchhHHHHHHHHHHhC---------CCEEEEecCceEEeCCeecccCC
Confidence               56 666666653222  2333567789999999999999888774         448999999766554322  111


Q ss_pred             C--CCCCCCCccchHHHHHHHHHHHH
Q 027991          185 F--DKINDPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       185 ~--~~~~~~~~~Y~~ska~~~~l~~~  208 (216)
                      .  ..+......|+.||+--+.+...
T Consensus       141 E~~p~p~~~~d~Y~~sKa~aE~~Vl~  166 (361)
T KOG1430|consen  141 ESLPYPLKHIDPYGESKALAEKLVLE  166 (361)
T ss_pred             CCCCCccccccccchHHHHHHHHHHH
Confidence            1  12222334899999998887754

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.36  E-value=3.5e-11  Score=110.12  Aligned_cols=139  Identities=15%  Similarity=0.145  Sum_probs=99.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .+++|||||+|.||.++++.|.++|++|.+                          ...|++|.+.+.+.+++.     +
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~-----~  428 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNV-----K  428 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhh-----C
Confidence            347999999999999999999999988731                          113678888887777654     6


Q ss_pred             ccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc---c-C-Ccc
Q 027991          111 LNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY---H-E-GIR  184 (216)
Q Consensus       111 id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~-~-~~~  184 (216)
                      +|++||+|+..+. ..+..+++..+.+++|+.++.++++++...          +.+.|++||.+.+-+.   + + ..+
T Consensus       429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----------g~~~v~~Ss~~v~~~~~~~~~~~~~p  498 (668)
T PLN02260        429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN----------GLLMMNFATGCIFEYDAKHPEGSGIG  498 (668)
T ss_pred             CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----------CCeEEEEcccceecCCcccccccCCC
Confidence            8999999998653 234455667889999999999999998764          2246667664322111   1 1 112


Q ss_pred             C--CCCCC-CCccchHHHHHHHHHHHHHH
Q 027991          185 F--DKIND-PSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       185 ~--~~~~~-~~~~Y~~ska~~~~l~~~~~  210 (216)
                      |  +.... +...|+.||.+.+.+++.+.
T Consensus       499 ~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~  527 (668)
T PLN02260        499 FKEEDKPNFTGSFYSKTKAMVEELLREYD  527 (668)
T ss_pred             CCcCCCCCCCCChhhHHHHHHHHHHHhhh
Confidence            3  22233 34689999999999887653

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.34  E-value=7.5e-11  Score=90.54  Aligned_cols=131  Identities=24%  Similarity=0.198  Sum_probs=94.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      |+|+||+|.+|..++++|+++|++|++..|+.++.++          ..++.++++|+.|.+.+.+.++       +.|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            6899999999999999999999999999999887654          3578999999999988888776       6899


Q ss_pred             EEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCc
Q 027991          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSG  193 (216)
Q Consensus       114 li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  193 (216)
                      +|+++|....       +            ...++.+++.+++.     +..++|++|+.......+... .........
T Consensus        64 vi~~~~~~~~-------~------------~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~~~~-~~~~~~~~~  118 (183)
T PF13460_consen   64 VIHAAGPPPK-------D------------VDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPPGLF-SDEDKPIFP  118 (183)
T ss_dssp             EEECCHSTTT-------H------------HHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCTSEE-EGGTCGGGH
T ss_pred             hhhhhhhhcc-------c------------cccccccccccccc-----ccccceeeeccccCCCCCccc-ccccccchh
Confidence            9999986432       1            34556666666664     456899999876555333321 111111124


Q ss_pred             cchHHHHHHHHHH
Q 027991          194 SFQSSALLLLLLL  206 (216)
Q Consensus       194 ~Y~~ska~~~~l~  206 (216)
                      .|...|...+.+.
T Consensus       119 ~~~~~~~~~e~~~  131 (183)
T PF13460_consen  119 EYARDKREAEEAL  131 (183)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHH
Confidence            5666666555444

...

>PRK05865 hypothetical protein; Provisional

Probab=99.31  E-value=4.9e-11  Score=110.28  Aligned_cols=103  Identities=23%  Similarity=0.249  Sum_probs=82.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++||||+|+||.++++.|+++|++|++++|+....      .     ..++.++.+|++|.+++.++++       ++|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            599999999999999999999999999999874321      0     1247789999999999888775       589


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      ++||+|+...+           .+++|+.++.++++++..    .     +.++||++||.
T Consensus        64 ~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa~~----~-----gvkr~V~iSS~  104 (854)
T PRK05865         64 VVAHCAWVRGR-----------NDHINIDGTANVLKAMAE----T-----GTGRIVFTSSG  104 (854)
T ss_pred             EEEECCCcccc-----------hHHHHHHHHHHHHHHHHH----c-----CCCeEEEECCc
Confidence            99999986422           467899998887766543    2     34689999996

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.29  E-value=1.1e-11  Score=98.71  Aligned_cols=99  Identities=14%  Similarity=0.228  Sum_probs=75.2

Q ss_pred             EEEEeCC-CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGA-TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~-s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +=.||.. +||||.++|+.|+++|++|+++++...        +..   ..   ...+|+++.+++.++++.+.+.++++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~---~~---~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP---EP---HPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc---cc---CCcceeecHHHHHHHHHHHHHHcCCC
Confidence            3456665 569999999999999999999876311        100   00   24589999999999999999999999


Q ss_pred             cEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHH
Q 027991          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTN  148 (216)
Q Consensus       112 d~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~  148 (216)
                      |++|||||+.  .+..+.+.++|++++   ..+.|++.+
T Consensus        82 DiLVnnAgv~d~~~~~~~s~e~~~~~~---~~~~~~~~~  117 (227)
T TIGR02114        82 DILIHSMAVSDYTPVYMTDLEQVQASD---NLNEFLSKQ  117 (227)
T ss_pred             CEEEECCEeccccchhhCCHHHHhhhc---chhhhhccc
Confidence            9999999975  355677888888764   445666654

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.27  E-value=1.1e-10  Score=94.43  Aligned_cols=152  Identities=18%  Similarity=0.170  Sum_probs=90.7

Q ss_pred             EeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhc------------CCCeEEEEEccCCCHH------
Q 027991           36 VTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI------------PSAKVDAMELDLSSLA------   95 (216)
Q Consensus        36 ItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~~------   95 (216)
                      ||||+|.||..+.++|++++.  +|+...|..+. +...+.+.+..            ...++.++.+|++++.      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~-~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS-QSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH-HHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc-ccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999986  89999997643 22223332111            1568999999999853      


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991           96 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +..++.+       .+|++||+|+......     .+.+..++|+.|+..+++.+...         +..+++++|| +.
T Consensus        80 ~~~~L~~-------~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt~~ll~la~~~---------~~~~~~~iST-a~  137 (249)
T PF07993_consen   80 DYQELAE-------EVDVIIHCAASVNFNA-----PYSELRAVNVDGTRNLLRLAAQG---------KRKRFHYIST-AY  137 (249)
T ss_dssp             HHHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTSS---------S---EEEEEE-GG
T ss_pred             Hhhcccc-------ccceeeecchhhhhcc-----cchhhhhhHHHHHHHHHHHHHhc---------cCcceEEecc-cc
Confidence            4444443       5799999999864332     23346789999999999988632         1228999999 32


Q ss_pred             cccccCCc-----------cCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          176 RLAYHEGI-----------RFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       176 ~~~~~~~~-----------~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..+.....           ...........|..||..-+.+.+...
T Consensus       138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~  183 (249)
T PF07993_consen  138 VAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAA  183 (249)
T ss_dssp             GTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHH
Confidence            22222111           111222333499999999998887765

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.20  E-value=2.1e-10  Score=87.99  Aligned_cols=84  Identities=17%  Similarity=0.186  Sum_probs=70.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++||||+ |+|.++++.|+++|++|++.+|+.++.+.....+..   ..++.++++|++|++++.++++++.+.++++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            58999998 777789999999999999999987665554443321   34688899999999999999999999999999


Q ss_pred             EEEECCcc
Q 027991          113 ILINNAGI  120 (216)
Q Consensus       113 ~li~~Ag~  120 (216)
                      ++|+.+-.
T Consensus        78 ~lv~~vh~   85 (177)
T PRK08309         78 LAVAWIHS   85 (177)
T ss_pred             EEEEeccc
Confidence            99987665

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.19  E-value=3.3e-10  Score=92.95  Aligned_cols=100  Identities=17%  Similarity=0.082  Sum_probs=68.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      +|||||+|.||..+++.|+++|++|++++|+.+......        .  ..  ..|+.. ..+       .+...++|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~--~~~~~~-~~~-------~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EG--YKPWAP-LAE-------SEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--ee--eecccc-cch-------hhhcCCCCE
Confidence            589999999999999999999999999999876532210        0  01  112222 111       122347999


Q ss_pred             EEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHH
Q 027991          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (216)
Q Consensus       114 li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  153 (216)
                      +||+||..........+.....+++|+.++..+++++...
T Consensus        61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  100 (292)
T TIGR01777        61 VINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA  100 (292)
T ss_pred             EEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc
Confidence            9999997533333344556678899999988888877543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.14  E-value=2.8e-09  Score=88.99  Aligned_cols=158  Identities=20%  Similarity=0.176  Sum_probs=107.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcc---hHHHHHHHH-----hhcCCCeEEEEEccCCC------HHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAA---GKDVKETIV-----KEIPSAKVDAMELDLSS------LAS   96 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~---~~~~~~~~~-----~~~~~~~~~~~~~Dv~~------~~~   96 (216)
                      +++|+|||+|.||..+..+|+.+- ++|+...|-.+.   .+...+.+.     ++....++..+..|+++      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999998776 589988876542   222222222     22336799999999994      445


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCc-EEEEEcCCcc
Q 027991           97 VRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG-RIINVSSEGH  175 (216)
Q Consensus        97 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g-~iv~isS~~~  175 (216)
                      ++++.+       .+|.+|||++..+....     +.+....|+.|+..++|.+.-.          ++ .+.+|||.+.
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~p-----Ys~L~~~NVlGT~evlrLa~~g----------k~Kp~~yVSsisv  138 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVFP-----YSELRGANVLGTAEVLRLAATG----------KPKPLHYVSSISV  138 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccCc-----HHHhcCcchHhHHHHHHHHhcC----------CCceeEEEeeeee
Confidence            555554       57999999998654332     3456788999999998877433          33 4889998654


Q ss_pred             cccc---cCCccCC-------CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          176 RLAY---HEGIRFD-------KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       176 ~~~~---~~~~~~~-------~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .-..   ......+       .......+|+.||-+-+.+++.-..
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~  184 (382)
T COG3320         139 GETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD  184 (382)
T ss_pred             ccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh
Confidence            3321   1111111       2333345899999999999876543

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.14  E-value=2.9e-10  Score=91.29  Aligned_cols=161  Identities=16%  Similarity=0.122  Sum_probs=116.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHh--hcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK--EIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +|++||||-+|-=|..+++.|+++|+.|.-+.|+........-.+..  ...+.++....+|++|...+.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            68999999999999999999999999999998875432211101110  112456889999999999999999988    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~  186 (216)
                       ++|-++|.|+-+  +...+-++...+.+++..|+..++.++.-+-.       ++-++..-|| +-.+|.-.  .....
T Consensus        78 -~PdEIYNLaAQS--~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~-------~~~rfYQASt-SE~fG~v~~~pq~E~  146 (345)
T COG1089          78 -QPDEIYNLAAQS--HVGVSFEQPEYTADVDAIGTLRLLEAIRILGE-------KKTRFYQAST-SELYGLVQEIPQKET  146 (345)
T ss_pred             -Cchhheeccccc--cccccccCcceeeeechhHHHHHHHHHHHhCC-------cccEEEeccc-HHhhcCcccCccccC
Confidence             799999999864  34456666777889999999999987765532       1335444444 33333222  23357


Q ss_pred             CCCCCCccchHHHHHHHHHH
Q 027991          187 KINDPSGSFQSSALLLLLLL  206 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~  206 (216)
                      ++..|.+.|+.+|.--.-++
T Consensus       147 TPFyPrSPYAvAKlYa~W~t  166 (345)
T COG1089         147 TPFYPRSPYAVAKLYAYWIT  166 (345)
T ss_pred             CCCCCCCHHHHHHHHHHhee
Confidence            88889999999997554333

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.13  E-value=1.2e-09  Score=97.92  Aligned_cols=127  Identities=13%  Similarity=0.126  Sum_probs=89.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEEcCCcc--h-HHHHHH---------HHhhcC-------CCeEEE
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAA--G-KDVKET---------IVKEIP-------SAKVDA   86 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~---~Vi~~~r~~~~--~-~~~~~~---------~~~~~~-------~~~~~~   86 (216)
                      +++|++|||||+|.||..++++|++.+.   +|++..|..+.  . +...++         +++.++       ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5899999999999999999999998763   67888886432  1 111111         222222       247899


Q ss_pred             EEccCCCHH------HHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc
Q 027991           87 MELDLSSLA------SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK  160 (216)
Q Consensus        87 ~~~Dv~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~  160 (216)
                      +..|+++++      ..+.+.+       .+|++||+|+....     .+..+..+++|+.++..+++.+...-      
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~~------  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKCK------  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHcC------
Confidence            999999862      3333332       58999999998642     13467789999999999999876541      


Q ss_pred             CCCCcEEEEEcCCcc
Q 027991          161 SGGEGRIINVSSEGH  175 (216)
Q Consensus       161 ~~~~g~iv~isS~~~  175 (216)
                        ...++|++||.+.
T Consensus       259 --~lk~fV~vSTayV  271 (605)
T PLN02503        259 --KLKLFLQVSTAYV  271 (605)
T ss_pred             --CCCeEEEccCcee
Confidence              1237888888543

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.12  E-value=7.4e-10  Score=88.93  Aligned_cols=155  Identities=15%  Similarity=0.130  Sum_probs=107.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ....+++++||||+|+||..++.+|..+|+.||++|..-..-....+.+-   ...++..+.-|+..+     ++.    
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~---~~~~fel~~hdv~~p-----l~~----   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI---GHPNFELIRHDVVEP-----LLK----   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc---cCcceeEEEeechhH-----HHH----
Confidence            34567899999999999999999999999999999876544333322221   135677777777765     444    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC----
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG----  182 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  182 (216)
                         .+|.++|.|++.+|..  -.....+++.+|+.++.+++..+.+..          .|++..|+ +-.+|.|-.    
T Consensus        91 ---evD~IyhLAapasp~~--y~~npvktIktN~igtln~lglakrv~----------aR~l~aST-seVYgdp~~hpq~  154 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPH--YKYNPVKTIKTNVIGTLNMLGLAKRVG----------ARFLLAST-SEVYGDPLVHPQV  154 (350)
T ss_pred             ---HhhhhhhhccCCCCcc--cccCccceeeecchhhHHHHHHHHHhC----------ceEEEeec-ccccCCcccCCCc
Confidence               4699999999876543  112234678899999999999887774          26666555 344444332    


Q ss_pred             ccC---CCCCCCCccchHHHHHHHHHHHHH
Q 027991          183 IRF---DKINDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       183 ~~~---~~~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                      ..|   -.+..+...|...|.+.+.|+..+
T Consensus       155 e~ywg~vnpigpr~cydegKr~aE~L~~~y  184 (350)
T KOG1429|consen  155 ETYWGNVNPIGPRSCYDEGKRVAETLCYAY  184 (350)
T ss_pred             cccccccCcCCchhhhhHHHHHHHHHHHHh
Confidence            222   233444558999999999888654

>PRK12320 hypothetical protein; Provisional

Probab=99.06  E-value=2.5e-09  Score=97.24  Aligned_cols=104  Identities=19%  Similarity=0.187  Sum_probs=78.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|.||..++++|.++|++|++++|.....         .  ...+.++++|+++.. +.++++       ++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~~-l~~al~-------~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNPV-LQELAG-------EAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCHH-HHHHhc-------CCC
Confidence            599999999999999999999999999999864321         0  235788999999973 443332       689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++||.|+....    .      ...+|+.++.++++++...          +.++|++||.++
T Consensus        63 ~VIHLAa~~~~----~------~~~vNv~Gt~nLleAA~~~----------GvRiV~~SS~~G  105 (699)
T PRK12320         63 AVIHLAPVDTS----A------PGGVGITGLAHVANAAARA----------GARLLFVSQAAG  105 (699)
T ss_pred             EEEEcCccCcc----c------hhhHHHHHHHHHHHHHHHc----------CCeEEEEECCCC
Confidence            99999986311    1      1247889998888877432          237999998753

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.99  E-value=3.3e-09  Score=85.22  Aligned_cols=162  Identities=15%  Similarity=0.050  Sum_probs=113.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcC--CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRG--VHVVMGVRD--IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+.++||||.|.||...+..++..-  .+.+..+.-  ...++ ..++.   -..++..++..|+.+...+..++.+   
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~-~l~~~---~n~p~ykfv~~di~~~~~~~~~~~~---   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLK-NLEPV---RNSPNYKFVEGDIADADLVLYLFET---   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccc-hhhhh---ccCCCceEeeccccchHHHHhhhcc---
Confidence            4889999999999999999998864  344444321  11122 22222   2257899999999999888877754   


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC--cccccccCCcc
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE--GHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~--~~~~~~~~~~~  184 (216)
                        ..+|.++|-|+..+  .+.+.-+-......|+.++..+++.+.....        -.++|.+|+.  +|-........
T Consensus        79 --~~id~vihfaa~t~--vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~--------i~~fvhvSTdeVYGds~~~~~~~  146 (331)
T KOG0747|consen   79 --EEIDTVIHFAAQTH--VDRSFGDSFEFTKNNILSTHVLLEAVRVSGN--------IRRFVHVSTDEVYGDSDEDAVVG  146 (331)
T ss_pred             --CchhhhhhhHhhhh--hhhhcCchHHHhcCCchhhhhHHHHHHhccC--------eeEEEEecccceecCcccccccc
Confidence              37999999998753  2223333455677899999999998877753        2389999984  44333222222


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ....+.|...|++||+|-+++.+++..
T Consensus       147 E~s~~nPtnpyAasKaAaE~~v~Sy~~  173 (331)
T KOG0747|consen  147 EASLLNPTNPYAASKAAAEMLVRSYGR  173 (331)
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHhh
Confidence            445677788999999999999999864

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.97  E-value=3.6e-08  Score=96.99  Aligned_cols=157  Identities=18%  Similarity=0.167  Sum_probs=101.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC----CeEEEEEcCCcchHHHHHHHHhh---c------CCCeEEEEEccCCCH---
Q 027991           31 GLTAIVTGATSGIGTETARVLALRG----VHVVMGVRDIAAGKDVKETIVKE---I------PSAKVDAMELDLSSL---   94 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g----~~Vi~~~r~~~~~~~~~~~~~~~---~------~~~~~~~~~~Dv~~~---   94 (216)
                      .++++|||++|.||..+++.|++++    .+|+...|+..... ..+.+...   +      ...++.++.+|++++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEA-GLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHH-HHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5789999999999999999999987    68888888754322 22222211   0      013688999999854   


Q ss_pred             ---HHHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEc
Q 027991           95 ---ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  171 (216)
Q Consensus        95 ---~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~is  171 (216)
                         +...++.       ..+|++||+|+.....  ..   +......|+.++..+++.+...         +..+++++|
T Consensus      1050 l~~~~~~~l~-------~~~d~iiH~Aa~~~~~--~~---~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~vS 1108 (1389)
T TIGR03443      1050 LSDEKWSDLT-------NEVDVIIHNGALVHWV--YP---YSKLRDANVIGTINVLNLCAEG---------KAKQFSFVS 1108 (1389)
T ss_pred             cCHHHHHHHH-------hcCCEEEECCcEecCc--cC---HHHHHHhHHHHHHHHHHHHHhC---------CCceEEEEe
Confidence               3333322       3689999999976422  12   3344567999999998877432         234799999


Q ss_pred             CCccccccc-------------CCccCC-----CCCCCCccchHHHHHHHHHHHHH
Q 027991          172 SEGHRLAYH-------------EGIRFD-----KINDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       172 S~~~~~~~~-------------~~~~~~-----~~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                      |.+.+.+..             ......     ........|+.||.+.+.++...
T Consensus      1109 S~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~ 1164 (1389)
T TIGR03443      1109 STSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREA 1164 (1389)
T ss_pred             CeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHH
Confidence            975542100             001111     11122347999999999887654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.96  E-value=3.1e-09  Score=91.22  Aligned_cols=78  Identities=22%  Similarity=0.282  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           28 DGSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        28 ~~~~k~~lItG~----------------s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      +++||++|||||                +|++|.++|+.|+.+|++|++++++.+ .+         .+.   .+..+|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~---~~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPA---GVKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCC---CcEEEcc
Confidence            478999999999                455999999999999999999988752 11         111   2356799


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccC
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      ++.+++.+.+.   +.++.+|++|||||+.
T Consensus       252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        252 ESAQEMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             CCHHHHHHHHH---HhcCCCCEEEEccccc
Confidence            99888777665   4577899999999985

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.91  E-value=1.3e-08  Score=83.65  Aligned_cols=76  Identities=17%  Similarity=0.140  Sum_probs=61.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC-c
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ-L  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~-i  111 (216)
                      +++||||+|.+|..++++|+++|++|.+..|+.++..           ...+..+.+|++|++.+.++++.. +.+.+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            3899999999999999999999999999999976532           123556788999999999988653 22345 8


Q ss_pred             cEEEECCcc
Q 027991          112 NILINNAGI  120 (216)
Q Consensus       112 d~li~~Ag~  120 (216)
                      |.++++++.
T Consensus        69 d~v~~~~~~   77 (285)
T TIGR03649        69 SAVYLVAPP   77 (285)
T ss_pred             eEEEEeCCC
Confidence            999998764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=98.82  E-value=3e-07  Score=75.51  Aligned_cols=164  Identities=19%  Similarity=0.114  Sum_probs=116.4

Q ss_pred             CCEEEEeCC-CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGA-TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~-s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ..+|+|.|. +.-|++.+|.-|-++|+-|+++..+.++.+...+    +. ...+.....|..++.++...++++.....
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~----e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVES----ED-RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHh----cc-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            457889885 6899999999999999999999988765433222    21 34577777788777777776666554433


Q ss_pred             --------------CccEEEECCcc---CCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEc-
Q 027991          110 --------------QLNILINNAGI---MGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS-  171 (216)
Q Consensus       110 --------------~id~li~~Ag~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~is-  171 (216)
                                    .+..+|.....   .+|.++++.+.|.+.+++|+..++.+++.++|+++.+.   ..+.+||+++ 
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~---~~~~~iil~~P  154 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRS---NQKSKIILFNP  154 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCceEEEEeC
Confidence                          34455544443   25677889999999999999999999999999999742   1356677665 


Q ss_pred             CCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          172 SEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |..+.+..|...          .-.....++.+|..+|++.
T Consensus       155 si~ssl~~Pfhs----------pE~~~~~al~~~~~~LrrE  185 (299)
T PF08643_consen  155 SISSSLNPPFHS----------PESIVSSALSSFFTSLRRE  185 (299)
T ss_pred             chhhccCCCccC----------HHHHHHHHHHHHHHHHHHH
Confidence            666666544443          2255666777777777654

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.82  E-value=2.7e-08  Score=82.18  Aligned_cols=84  Identities=21%  Similarity=0.220  Sum_probs=65.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCC---cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .+++|+++|+|+ ||+|++++..|+..|++ |++++|+.   +++++..+++....  ....+..+|+++.+++.+.++ 
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~-  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA-  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc-
Confidence            467899999999 79999999999999985 99999997   56677776665442  344556789888777765554 


Q ss_pred             HHhhcCCccEEEECCccC
Q 027991          104 YNIQHHQLNILINNAGIM  121 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~  121 (216)
                            ..|+||||..+.
T Consensus       199 ------~~DilINaTp~G  210 (289)
T PRK12548        199 ------SSDILVNATLVG  210 (289)
T ss_pred             ------cCCEEEEeCCCC
Confidence                  459999987653

>PLN00016 RNA-binding protein; Provisional

Probab=98.81  E-value=1.1e-07  Score=81.32  Aligned_cols=81  Identities=21%  Similarity=0.270  Sum_probs=56.6

Q ss_pred             CCCEEEEe----CCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHH----HHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           30 SGLTAIVT----GATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK----ETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        30 ~~k~~lIt----G~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ..+++|||    ||+|.||..+++.|+++|++|++++|+........    ..+. +.....+.++.+|++|   +.+++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFS-ELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhh-HhhhcCceEEEecHHH---HHhhh
Confidence            34689999    99999999999999999999999999875422111    0000 1112247788899876   33333


Q ss_pred             HHHHhhcCCccEEEECCc
Q 027991          102 SEYNIQHHQLNILINNAG  119 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag  119 (216)
                      .     ..++|++||+++
T Consensus       127 ~-----~~~~d~Vi~~~~  139 (378)
T PLN00016        127 A-----GAGFDVVYDNNG  139 (378)
T ss_pred             c-----cCCccEEEeCCC
Confidence            2     136899999876

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.74  E-value=1e-07  Score=74.10  Aligned_cols=84  Identities=21%  Similarity=0.276  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++++++|+||+|++|..+++.|+++|++|++++|+.+++++..+.+.... +  .....+|..+.+++.+.++    
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~--~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-G--EGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-C--CcEEEeeCCCHHHHHHHHh----
Confidence            46788999999999999999999999999999999999888877777665332 2  3355678888888777665    


Q ss_pred             hcCCccEEEECCcc
Q 027991          107 QHHQLNILINNAGI  120 (216)
Q Consensus       107 ~~~~id~li~~Ag~  120 (216)
                         +.|++|++...
T Consensus        97 ---~~diVi~at~~  107 (194)
T cd01078          97 ---GADVVFAAGAA  107 (194)
T ss_pred             ---cCCEEEECCCC
Confidence               56988886554

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.71  E-value=5.9e-08  Score=83.08  Aligned_cols=78  Identities=19%  Similarity=0.298  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCC---------------CCc-hHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           28 DGSGLTAIVTGA---------------TSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        28 ~~~~k~~lItG~---------------s~g-iG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      +++||++|||||               |+| +|.++|+.|..+|++|++++++....          . ..  .+..+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~--~~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PP--GVKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CC--CcEEEEe
Confidence            478999999999               666 99999999999999999988665321          1 11  2356899


Q ss_pred             CCHHHH-HHHHHHHHhhcCCccEEEECCccC
Q 027991           92 SSLASV-RNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        92 ~~~~~~-~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      ++.+++ ++++++.   ++.+|++|+|||+.
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavs  276 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVA  276 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEccccc
Confidence            998888 5555443   46799999999986

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.70  E-value=2.6e-07  Score=74.30  Aligned_cols=126  Identities=13%  Similarity=0.080  Sum_probs=81.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      ++||||+|.||.+++.+|...|++|+++.|+..+.+...        ...       +...+.+.+..+      .++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~-------v~~~~~~~~~~~------~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPN-------VTLWEGLADALT------LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Ccc-------ccccchhhhccc------CCCCE
Confidence            589999999999999999999999999999977643211        111       111222222221      16999


Q ss_pred             EEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          114 LINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       114 li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +||.||..-.....+.+.-+..++    +-+..++.+.....+.    ..+.++.+-+|..|++|......++-.
T Consensus        60 vINLAG~~I~~rrWt~~~K~~i~~----SRi~~T~~L~e~I~~~----~~~P~~~isaSAvGyYG~~~~~~~tE~  126 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEEIRQ----SRINTTEKLVELIAAS----ETKPKVLISASAVGYYGHSGDRVVTEE  126 (297)
T ss_pred             EEECCCCccccccCCHHHHHHHHH----HHhHHHHHHHHHHHhc----cCCCcEEEecceEEEecCCCceeeecC
Confidence            999999742222235544444444    4445666666666543    145677777788899988776666544

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.68  E-value=3e-06  Score=74.89  Aligned_cols=169  Identities=14%  Similarity=0.080  Sum_probs=104.3

Q ss_pred             CCCCCCCCEEEEeCCC-CchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhc--CCCeEEEEEccCCCHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGAT-SGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s-~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      +.....++++||||++ +.||.+++..|++.|++||++.. -.++..+..+.+-..+  ++..+.++.++.....+++.+
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            4566788999999999 58999999999999999999854 4444455555555544  356788999999999999999


Q ss_pred             HHHHHhhcC--------------CccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCC
Q 027991          101 ASEYNIQHH--------------QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE  164 (216)
Q Consensus       101 ~~~~~~~~~--------------~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~  164 (216)
                      ++.|.++-.              .+|.+|=-|.+.  +...+... .-+..+++-+.+...++-.+.++-..+  .-...
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~ags-raE~~~rilLw~V~Rliggl~~~~s~r--~v~~R  546 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGS-RAEFAMRILLWNVLRLIGGLKKQGSSR--GVDTR  546 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCc-hHHHHHHHHHHHHHHHHHHhhhhcccc--Ccccc
Confidence            999875432              246666555553  22222211 122334444444444444333332111  00112


Q ss_pred             cEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHH
Q 027991          165 GRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLH  207 (216)
Q Consensus       165 g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~  207 (216)
                      -+||.-.|       |+..    ....-..|+.||+++.++..
T Consensus       547 ~hVVLPgS-------PNrG----~FGgDGaYgEsK~aldav~~  578 (866)
T COG4982         547 LHVVLPGS-------PNRG----MFGGDGAYGESKLALDAVVN  578 (866)
T ss_pred             eEEEecCC-------CCCC----ccCCCcchhhHHHHHHHHHH
Confidence            35555444       1111    12233489999999998753

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.65  E-value=3.9e-06  Score=62.55  Aligned_cols=154  Identities=11%  Similarity=0.012  Sum_probs=102.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc-
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-  108 (216)
                      +-.+++|-||-|.+|.++++.|-.+++-|.-++-.++.-            ...-..+..|-+=-|+-+..++++.+.. 
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------ccceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            446799999999999999999999999988887765431            1112334444443344455566655544 


Q ss_pred             -CCccEEEECCccCCCCCCC---ChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          109 -HQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       109 -~~id~li~~Ag~~~~~~~~---~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                       .++|.+++-||-+.--...   -..+.+.++.-.+....+-.+.+..+++       ++|-.-..+..++.-|.|+++ 
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK-------~GGLL~LtGAkaAl~gTPgMI-  141 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK-------PGGLLQLTGAKAALGGTPGMI-  141 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC-------CCceeeecccccccCCCCccc-
Confidence             3799999999875211111   1123344566666666666666666665       466555555566667777776 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|++.|++...|++++.-.
T Consensus       142 ---------GYGMAKaAVHqLt~SLaak  160 (236)
T KOG4022|consen  142 ---------GYGMAKAAVHQLTSSLAAK  160 (236)
T ss_pred             ---------chhHHHHHHHHHHHHhccc
Confidence                     8999999999999998643

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.62  E-value=3e-07  Score=85.85  Aligned_cols=166  Identities=13%  Similarity=0.096  Sum_probs=124.2

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHH---HHHHHhhcCCCeEEEEEccCCCHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDV---KETIVKEIPSAKVDAMELDLSSLASVR   98 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~~~   98 (216)
                      ++....-..|..+|+||-||+|++++++|..+|+ .+++++|+.-+....   +...+..  +.++.+-..|++..+..+
T Consensus      1760 I~rt~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~ 1837 (2376)
T KOG1202|consen 1760 IPRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGAR 1837 (2376)
T ss_pred             cchhhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHH
Confidence            3333444578899999999999999999999999 689999986543222   2233333  667877888999999999


Q ss_pred             HHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991           99 NFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus        99 ~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      +++++. +..+.+-.++|.|.+.  ...++.+++++.+.-+..+.+++++-+.-.+....       --.+|.+||+..-
T Consensus      1838 ~Li~~s-~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~-------LdyFv~FSSvscG 1909 (2376)
T KOG1202|consen 1838 GLIEES-NKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE-------LDYFVVFSSVSCG 1909 (2376)
T ss_pred             HHHHHh-hhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc-------cceEEEEEeeccc
Confidence            999876 4567889999999987  35678899999999999999999977655554331       2378889998877


Q ss_pred             ccccCCccCCCCCCCCccchHHHHHHHHHHHH
Q 027991          177 LAYHEGIRFDKINDPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~  208 (216)
                      .|..+..          .||-+-.+.+-++..
T Consensus      1910 RGN~GQt----------NYG~aNS~MERiceq 1931 (2376)
T KOG1202|consen 1910 RGNAGQT----------NYGLANSAMERICEQ 1931 (2376)
T ss_pred             CCCCccc----------ccchhhHHHHHHHHH
Confidence            7766655          555555565555544

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.61  E-value=2e-07  Score=74.52  Aligned_cols=96  Identities=14%  Similarity=0.233  Sum_probs=62.5

Q ss_pred             EEEEeCCCCc-hHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~g-iG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +-.||+.|+| ||.++|+.|+++|++|++++|......         .+...+.++.++  ..++   +.+.+.+.++.+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~---------~~~~~v~~i~v~--s~~~---m~~~l~~~~~~~   82 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP---------EPHPNLSIIEIE--NVDD---LLETLEPLVKDH   82 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC---------CCCCCeEEEEEe--cHHH---HHHHHHHHhcCC
Confidence            5678877765 999999999999999999987642110         011245555532  2222   233333334578


Q ss_pred             cEEEECCccCC--CCCCCChHHHHHHHHHHHhH
Q 027991          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLG  142 (216)
Q Consensus       112 d~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~  142 (216)
                      |++||+||+..  +....+.+++.+++++|...
T Consensus        83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             CEEEeCCccCCceehhhhhhhhhhhhhhhhhhh
Confidence            99999999863  33345677788887776443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.60  E-value=2.3e-06  Score=64.95  Aligned_cols=138  Identities=18%  Similarity=0.157  Sum_probs=100.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++.|.|+||-.|..|.++...+|++|..+.|+..+...          -+.+.+++.|+-|.+++.+.+.       +.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~----------~~~~~i~q~Difd~~~~a~~l~-------g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA----------RQGVTILQKDIFDLTSLASDLA-------GHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc----------cccceeecccccChhhhHhhhc-------CCc
Confidence            57899999999999999999999999999999877542          1457789999999999866654       789


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  192 (216)
                      ++|..-|...+..   .   ..+.    .    ..+.++..++.+     ...|++.++..++..-.++....+.+..|.
T Consensus        65 aVIsA~~~~~~~~---~---~~~~----k----~~~~li~~l~~a-----gv~RllVVGGAGSL~id~g~rLvD~p~fP~  125 (211)
T COG2910          65 AVISAFGAGASDN---D---ELHS----K----SIEALIEALKGA-----GVPRLLVVGGAGSLEIDEGTRLVDTPDFPA  125 (211)
T ss_pred             eEEEeccCCCCCh---h---HHHH----H----HHHHHHHHHhhc-----CCeeEEEEcCccceEEcCCceeecCCCCch
Confidence            9999888752211   1   1111    1    134455555543     567899999888877777766667777777


Q ss_pred             ccchHHHHHHHHHH
Q 027991          193 GSFQSSALLLLLLL  206 (216)
Q Consensus       193 ~~Y~~ska~~~~l~  206 (216)
                      .-|.-.++.-+.|-
T Consensus       126 ey~~~A~~~ae~L~  139 (211)
T COG2910         126 EYKPEALAQAEFLD  139 (211)
T ss_pred             hHHHHHHHHHHHHH
Confidence            77777766655544

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.60  E-value=7.4e-07  Score=77.20  Aligned_cols=134  Identities=19%  Similarity=0.180  Sum_probs=91.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC---CeEEEEEcCCcc--h---------HHHHHHHHhhcCC--CeEEEEEccCC
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRG---VHVVMGVRDIAA--G---------KDVKETIVKEIPS--AKVDAMELDLS   92 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g---~~Vi~~~r~~~~--~---------~~~~~~~~~~~~~--~~~~~~~~Dv~   92 (216)
                      +++|+++||||+|++|+-++.+|+..-   -++++.-|....  .         +.+-+.+++.+|.  .++..+.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            689999999999999999999998754   267777665422  1         1222333334443  47888889998


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      +++---+.-+.. .....+|++||.|+....     .|-++-.+.+|..|+..+.+.+.....-+        ..+.+|+
T Consensus        90 ~~~LGis~~D~~-~l~~eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~l~--------~~vhVST  155 (467)
T KOG1221|consen   90 EPDLGISESDLR-TLADEVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVKLK--------ALVHVST  155 (467)
T ss_pred             CcccCCChHHHH-HHHhcCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhhhh--------eEEEeeh
Confidence            654211111110 112378999999997542     23456678899999999999998887654        7888998


Q ss_pred             Cccc
Q 027991          173 EGHR  176 (216)
Q Consensus       173 ~~~~  176 (216)
                      .+..
T Consensus       156 Ay~n  159 (467)
T KOG1221|consen  156 AYSN  159 (467)
T ss_pred             hhee
Confidence            7766

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.50  E-value=3.9e-06  Score=66.90  Aligned_cols=76  Identities=22%  Similarity=0.230  Sum_probs=59.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      ++|+||+|.+|..+++.|++.|++|.+..|+..+  +..+++...    .+.++.+|+.|.+++.++++       ++|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc-------CCce
Confidence            6899999999999999999999999999999742  233344432    34677999999999988886       7899


Q ss_pred             EEECCccCC
Q 027991          114 LINNAGIMG  122 (216)
Q Consensus       114 li~~Ag~~~  122 (216)
                      +|++.+...
T Consensus        68 v~~~~~~~~   76 (233)
T PF05368_consen   68 VFSVTPPSH   76 (233)
T ss_dssp             EEEESSCSC
T ss_pred             EEeecCcch
Confidence            998888643

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.45  E-value=2.7e-06  Score=68.85  Aligned_cols=123  Identities=24%  Similarity=0.156  Sum_probs=91.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+|-++-|-||+|.+|..++.+|+.-|.+|++=+|-.+.-..   .++-...-.++.+...|+.|+++|++.++.     
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r---~lkvmGdLGQvl~~~fd~~DedSIr~vvk~-----  130 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPR---HLKVMGDLGQVLFMKFDLRDEDSIRAVVKH-----  130 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchh---heeecccccceeeeccCCCCHHHHHHHHHh-----
Confidence            456678899999999999999999999999999987654221   111111124789999999999999999985     


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                        -+++||..|---+....      +..++|+.++-.+.+.+......         +.|.+|+..+.
T Consensus       131 --sNVVINLIGrd~eTknf------~f~Dvn~~~aerlAricke~GVe---------rfIhvS~Lgan  181 (391)
T KOG2865|consen  131 --SNVVINLIGRDYETKNF------SFEDVNVHIAERLARICKEAGVE---------RFIHVSCLGAN  181 (391)
T ss_pred             --CcEEEEeeccccccCCc------ccccccchHHHHHHHHHHhhChh---------heeehhhcccc
Confidence              38999999963222222      24467888888888888776443         78999886644

>PRK09620 hypothetical protein; Provisional

Probab=98.36  E-value=1.1e-06  Score=70.06  Aligned_cols=82  Identities=17%  Similarity=0.142  Sum_probs=51.7

Q ss_pred             CCCCEEEEeCCC----------------CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC
Q 027991           29 GSGLTAIVTGAT----------------SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS   92 (216)
Q Consensus        29 ~~~k~~lItG~s----------------~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   92 (216)
                      ++||++|||+|.                |.+|.++|+.|+.+|++|+++++........   +   .+......+..|  
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~---~---~~~~~~~~V~s~--   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND---I---NNQLELHPFEGI--   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc---c---CCceeEEEEecH--
Confidence            479999999996                9999999999999999999887643211110   0   001223333332  


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCccC
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                        .++.+.+.++.+. .++|++||.|++.
T Consensus        73 --~d~~~~l~~~~~~-~~~D~VIH~AAvs   98 (229)
T PRK09620         73 --IDLQDKMKSIITH-EKVDAVIMAAAGS   98 (229)
T ss_pred             --HHHHHHHHHHhcc-cCCCEEEECcccc
Confidence              2222233332221 2689999999985

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.35  E-value=2.2e-06  Score=72.98  Aligned_cols=77  Identities=26%  Similarity=0.442  Sum_probs=65.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +.+||.|+ |++|..+|..|+++| .+|.+.+|+.+++.+..+..     ..++...++|+.|.+.+.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            56899998 999999999999999 79999999988877665443     34799999999999999998874       


Q ss_pred             ccEEEECCccC
Q 027991          111 LNILINNAGIM  121 (216)
Q Consensus       111 id~li~~Ag~~  121 (216)
                      .|++||++...
T Consensus        69 ~d~VIn~~p~~   79 (389)
T COG1748          69 FDLVINAAPPF   79 (389)
T ss_pred             CCEEEEeCCch
Confidence            49999998854

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.27  E-value=3.3e-06  Score=72.55  Aligned_cols=76  Identities=28%  Similarity=0.462  Sum_probs=60.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           34 AIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+|.|+ |.+|..+++.|++++-  +|++.+|+.+++++..+.+    ...++.+.++|+.|.+++.++++       +.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            689999 9999999999999984  8999999998877766554    26789999999999999888876       45


Q ss_pred             cEEEECCccC
Q 027991          112 NILINNAGIM  121 (216)
Q Consensus       112 d~li~~Ag~~  121 (216)
                      |++||++|..
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999975

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.25  E-value=8.3e-06  Score=64.80  Aligned_cols=157  Identities=15%  Similarity=0.058  Sum_probs=102.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc----CCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .|++||||-+|-=|..++..|+.+|++|--+-|+........-+..-..    .+..+..--.|++|...+.++++.+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            4589999999999999999999999999888777655433322221111    1345666668999999999999988  


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc--cCCcc
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY--HEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~  184 (216)
                         .++-+.|.|+-++-..  +-+-.+.+-++...|++.++.+.-..-..       .+.-.+-.|..-.+|-  +....
T Consensus       106 ---kPtEiYnLaAQSHVkv--SFdlpeYTAeVdavGtLRlLdAi~~c~l~-------~~VrfYQAstSElyGkv~e~PQs  173 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKV--SFDLPEYTAEVDAVGTLRLLDAIRACRLT-------EKVRFYQASTSELYGKVQEIPQS  173 (376)
T ss_pred             ---CchhhhhhhhhcceEE--EeecccceeeccchhhhhHHHHHHhcCcc-------cceeEEecccHhhcccccCCCcc
Confidence               5788888887653111  11111233456778888888776555332       1222334444444442  22223


Q ss_pred             CCCCCCCCccchHHHHH
Q 027991          185 FDKINDPSGSFQSSALL  201 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~  201 (216)
                      ..++..|.+.|+.+|..
T Consensus       174 E~TPFyPRSPYa~aKmy  190 (376)
T KOG1372|consen  174 ETTPFYPRSPYAAAKMY  190 (376)
T ss_pred             cCCCCCCCChhHHhhhh
Confidence            56778888899999964

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.23  E-value=1.5e-05  Score=66.68  Aligned_cols=119  Identities=15%  Similarity=0.067  Sum_probs=76.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++.+++.|+|++|.+|..++..|+.++  .+++++|+.  .++....++....  .  .+...+++|+.++.+.++    
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~--~--~~~v~~~td~~~~~~~l~----   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHID--T--PAKVTGYADGELWEKALR----   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcC--c--CceEEEecCCCchHHHhC----
Confidence            345689999999999999999999666  589999993  2222222333322  1  223345655444333332    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                         +.|++|+++|.....    .+.+.+.+..|+...-.+.+.+.++         ...+||+++|.
T Consensus        76 ---gaDvVVitaG~~~~~----~~tR~dll~~N~~i~~~i~~~i~~~---------~~~~iviv~SN  126 (321)
T PTZ00325         76 ---GADLVLICAGVPRKP----GMTRDDLFNTNAPIVRDLVAAVASS---------APKAIVGIVSN  126 (321)
T ss_pred             ---CCCEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH---------CCCeEEEEecC
Confidence               689999999985322    2345667888877666666665555         23467777763

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.22  E-value=5.7e-06  Score=72.46  Aligned_cols=77  Identities=16%  Similarity=0.205  Sum_probs=58.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|+++|+|+++ +|.++|+.|+++|++|.+++++. +.+++..+++..    ..+.++..|..+.            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~------------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE----LGIELVLGEYPEE------------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh----cCCEEEeCCcchh------------
Confidence            46889999999876 99999999999999999999975 334444444432    2356777888761            


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                      ..+++|++|+++|+.
T Consensus        65 ~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 FLEGVDLVVVSPGVP   79 (450)
T ss_pred             HhhcCCEEEECCCCC
Confidence            124789999999974

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.18  E-value=1.9e-05  Score=57.83  Aligned_cols=79  Identities=22%  Similarity=0.287  Sum_probs=59.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++++++|.|+ ||.|.+++..|...|++ |.++.|+.+++++..+.+    ++..+.++..  .+   +.+.+.    
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~~--~~---~~~~~~----   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIPL--ED---LEEALQ----   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEEG--GG---HCHHHH----
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----CccccceeeH--HH---HHHHHh----
Confidence            688999999998 99999999999999985 999999998888877776    2334544443  22   222232    


Q ss_pred             hcCCccEEEECCccCCC
Q 027991          107 QHHQLNILINNAGIMGT  123 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~  123 (216)
                         ..|++|++.+...+
T Consensus        75 ---~~DivI~aT~~~~~   88 (135)
T PF01488_consen   75 ---EADIVINATPSGMP   88 (135)
T ss_dssp             ---TESEEEE-SSTTST
T ss_pred             ---hCCeEEEecCCCCc
Confidence               67999999887543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.16  E-value=1.9e-05  Score=64.06  Aligned_cols=73  Identities=27%  Similarity=0.302  Sum_probs=62.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      .+|||||+|.+|.+++++|..+|++|.+..|+.++.....         ..+.+...|+.+++.+...++       ++|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            5899999999999999999999999999999987765432         457899999999999988876       678


Q ss_pred             EEEECCccC
Q 027991          113 ILINNAGIM  121 (216)
Q Consensus       113 ~li~~Ag~~  121 (216)
                      .+++..+..
T Consensus        66 ~~~~i~~~~   74 (275)
T COG0702          66 GVLLISGLL   74 (275)
T ss_pred             EEEEEeccc
Confidence            888877764

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.16  E-value=2.5e-05  Score=66.83  Aligned_cols=135  Identities=21%  Similarity=0.172  Sum_probs=82.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ...+...++|+||+|++|.-+++.|.++|+.|....|+.++.++... +...  ......+..|...+.++...+-+.. 
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~--d~~~~~v~~~~~~~~d~~~~~~~~~-  150 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFV--DLGLQNVEADVVTAIDILKKLVEAV-  150 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccc--ccccceeeeccccccchhhhhhhhc-
Confidence            34566789999999999999999999999999999999877666544 1111  2233444555554444333222211 


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                       .....+++-++|--+..+     +..--..+...|..++++++.....+         +++++||..+.....
T Consensus       151 -~~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~aGvk---------~~vlv~si~~~~~~~  209 (411)
T KOG1203|consen  151 -PKGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKAGVK---------RVVLVGSIGGTKFNQ  209 (411)
T ss_pred             -cccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHhCCc---------eEEEEEeecCcccCC
Confidence             112345555555432221     11112334566777788888555443         899999877766543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.09  E-value=4.2e-05  Score=64.26  Aligned_cols=118  Identities=12%  Similarity=0.034  Sum_probs=67.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-------CeEEEEEcCCcc--hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRG-------VHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g-------~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      -+++|||++|.+|..++..|+..+       .+|++.+++...  ++....++....     .....|+....+..+.  
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~-----~~~~~~~~~~~~~~~~--   75 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA-----FPLLKSVVATTDPEEA--   75 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc-----ccccCCceecCCHHHH--
Confidence            469999999999999999999854       589999996532  221111111100     0011133322222222  


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                           +.+.|++||+||...... .+   -.+.++.|+.    +.+...+.+.+..   .+.+.+|++|.
T Consensus        76 -----l~~aDiVI~tAG~~~~~~-~~---R~~l~~~N~~----i~~~i~~~i~~~~---~~~~iiivvsN  129 (325)
T cd01336          76 -----FKDVDVAILVGAMPRKEG-ME---RKDLLKANVK----IFKEQGEALDKYA---KKNVKVLVVGN  129 (325)
T ss_pred             -----hCCCCEEEEeCCcCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHhC---CCCeEEEEecC
Confidence                 237899999999864321 12   2445666654    4455555555431   13567777776

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=98.09  E-value=3.3e-05  Score=64.75  Aligned_cols=107  Identities=15%  Similarity=0.116  Sum_probs=68.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ..+++.|||++|.+|..++..|+.++.  +++++|.++.  +....++....  ..  ....++++.+++.+.++     
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~--~~--~~i~~~~~~~d~~~~l~-----   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHIN--TP--AQVRGFLGDDQLGDALK-----   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCC--cC--ceEEEEeCCCCHHHHcC-----
Confidence            346899999999999999999997774  7999998872  21122333221  11  12234444434443333     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHH
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  153 (216)
                        ..|++|+.||.....    .+.+.+.+..|+.....+.+.+.++
T Consensus        86 --~aDiVVitAG~~~~~----g~~R~dll~~N~~i~~~i~~~i~~~  125 (323)
T PLN00106         86 --GADLVIIPAGVPRKP----GMTRDDLFNINAGIVKTLCEAVAKH  125 (323)
T ss_pred             --CCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence              789999999985332    2346677888877766666555555

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.06  E-value=9e-06  Score=64.18  Aligned_cols=146  Identities=14%  Similarity=0.158  Sum_probs=94.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR-GV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~-g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +.-++||||+-|-+|..+|+.|..+ |. .||+.+..... +.+.         ..--++-.|+.|...+++++-.    
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~---------~~GPyIy~DILD~K~L~eIVVn----  108 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT---------DVGPYIYLDILDQKSLEEIVVN----  108 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc---------ccCCchhhhhhccccHHHhhcc----
Confidence            3458999999999999999999654 65 68887755432 1111         1122566788888888776532    


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~  185 (216)
                       .+||-+||-.+..+-.   .+.+.-....+|..|..++++.+.++          +-+|..-|..+++-|..+  ..+-
T Consensus       109 -~RIdWL~HfSALLSAv---GE~NVpLA~~VNI~GvHNil~vAa~~----------kL~iFVPSTIGAFGPtSPRNPTPd  174 (366)
T KOG2774|consen  109 -KRIDWLVHFSALLSAV---GETNVPLALQVNIRGVHNILQVAAKH----------KLKVFVPSTIGAFGPTSPRNPTPD  174 (366)
T ss_pred             -cccceeeeHHHHHHHh---cccCCceeeeecchhhhHHHHHHHHc----------CeeEeecccccccCCCCCCCCCCC
Confidence             3899999987765322   22333345778999999999888766          335555555555544321  1222


Q ss_pred             CCCCCCCccchHHHHHHH
Q 027991          186 DKINDPSGSFQSSALLLL  203 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~  203 (216)
                      -....+...||.||.--+
T Consensus       175 ltIQRPRTIYGVSKVHAE  192 (366)
T KOG2774|consen  175 LTIQRPRTIYGVSKVHAE  192 (366)
T ss_pred             eeeecCceeechhHHHHH
Confidence            345566779999997443

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.04  E-value=2.3e-05  Score=65.90  Aligned_cols=76  Identities=22%  Similarity=0.264  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-C-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALR-G-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~-g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .++++|+++||||+|.||..++++|+.+ | .+|++++|+.+++.+..+++.           ..|+.   ++.+.    
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~---~l~~~----  212 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKIL---SLEEA----  212 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHH---hHHHH----
Confidence            3688999999999999999999999865 5 489999998776655444331           12222   22222    


Q ss_pred             HhhcCCccEEEECCccCCC
Q 027991          105 NIQHHQLNILINNAGIMGT  123 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~  123 (216)
                         ....|++|+.++...+
T Consensus       213 ---l~~aDiVv~~ts~~~~  228 (340)
T PRK14982        213 ---LPEADIVVWVASMPKG  228 (340)
T ss_pred             ---HccCCEEEECCcCCcC
Confidence               2368999999998643

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.00  E-value=0.00012  Score=61.14  Aligned_cols=82  Identities=16%  Similarity=0.206  Sum_probs=71.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCeEEEEEcCCcchHHHHHHHHhhcCC--CeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           33 TAIVTGATSGIGTETARVLAL----RGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~----~g~~Vi~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      -++|-||||.-|..+++++..    .|..+.+.+|+++++++..+...+..+.  .+..++.||.+|++++.++.+..  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            589999999999999999998    7888999999999999999998776532  23338899999999999999854  


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                           .++||++|+.
T Consensus        85 -----~vivN~vGPy   94 (423)
T KOG2733|consen   85 -----RVIVNCVGPY   94 (423)
T ss_pred             -----EEEEeccccc
Confidence                 6999999986

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.97  E-value=0.00027  Score=58.76  Aligned_cols=80  Identities=20%  Similarity=0.314  Sum_probs=56.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .++.++|+|+++++|.++++.+...|++|++++++.++.+.+    .. . +..   ...|..+.+....+.+....  +
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~-~-~~~---~~~~~~~~~~~~~~~~~~~~--~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KE-L-GAD---YVIDYRKEDFVREVRELTGK--R  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c-CCC---eEEecCChHHHHHHHHHhCC--C
Confidence            567999999999999999999999999999998887654432    11 1 221   12355665555555443322  3


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++++++|.
T Consensus       235 ~~d~~i~~~g~  245 (342)
T cd08266         235 GVDVVVEHVGA  245 (342)
T ss_pred             CCcEEEECCcH
Confidence            69999999883

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.96  E-value=6.5e-05  Score=59.09  Aligned_cols=140  Identities=15%  Similarity=0.108  Sum_probs=89.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++||||++|-.|.+|.+.+..+|.   +.++.                       .-..+|+++.++.+++|+..    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~-----------------------~skd~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI-----------------------GSKDADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEe-----------------------ccccccccchHHHHHHHhcc----
Confidence            6899999999999999999999885   22221                       11237999999999999876    


Q ss_pred             CCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc-----ccccccCC
Q 027991          109 HQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG-----HRLAYHEG  182 (216)
Q Consensus       109 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~-----~~~~~~~~  182 (216)
                       ++-++||.|+..+- +...+  .-.+.++.|+.-.-++++.+.++-.+         ++++..|..     ..+|.+..
T Consensus        55 -kPthVIhlAAmVGGlf~N~~--ynldF~r~Nl~indNVlhsa~e~gv~---------K~vsclStCIfPdkt~yPIdEt  122 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNT--YNLDFIRKNLQINDNVLHSAHEHGVK---------KVVSCLSTCIFPDKTSYPIDET  122 (315)
T ss_pred             -CCceeeehHhhhcchhhcCC--CchHHHhhcceechhHHHHHHHhchh---------hhhhhcceeecCCCCCCCCCHH
Confidence             67899999887632 22211  11345666776667777888777554         355544422     12222221


Q ss_pred             ccCCCCCCC-CccchHHHHHHHHHHHHHH
Q 027991          183 IRFDKINDP-SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       183 ~~~~~~~~~-~~~Y~~ska~~~~l~~~~~  210 (216)
                      .....+.++ +..|.-.|.++.-.++.++
T Consensus       123 mvh~gpphpsN~gYsyAKr~idv~n~aY~  151 (315)
T KOG1431|consen  123 MVHNGPPHPSNFGYSYAKRMIDVQNQAYR  151 (315)
T ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            112333333 4478888877665555554

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.83  E-value=0.00011  Score=56.72  Aligned_cols=77  Identities=18%  Similarity=0.188  Sum_probs=47.0

Q ss_pred             CCCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC
Q 027991           29 GSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS   92 (216)
Q Consensus        29 ~~~k~~lItG~----------------s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   92 (216)
                      ++||++|||+|                ||-.|.++|+.+..+|++|+++..... ...          ...+..  .++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~--i~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKV--IRVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEE--EE-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceE--EEec
Confidence            46899999987                478999999999999999999987742 110          123433  3455


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCccC
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      ..++..+.+.+   ....-|++|++|++.
T Consensus        68 sa~em~~~~~~---~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   68 SAEEMLEAVKE---LLPSADIIIMAAAVS   93 (185)
T ss_dssp             SHHHHHHHHHH---HGGGGSEEEE-SB--
T ss_pred             chhhhhhhhcc---ccCcceeEEEecchh
Confidence            55555544443   334559999999986

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.77  E-value=0.00028  Score=59.62  Aligned_cols=84  Identities=15%  Similarity=0.303  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC---------------------cchHHHHHHHHhhcCCCeE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---------------------AAGKDVKETIVKEIPSAKV   84 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~---------------------~~~~~~~~~~~~~~~~~~~   84 (216)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.++|+..                     .+++.+.+.+.+..|..++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            4577889999997 8999999999999997 899998763                     3456667778877777788


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           85 DAMELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        85 ~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ..+..|++. +.++++++       ..|++|.+..
T Consensus        99 ~~~~~~~~~-~~~~~~~~-------~~DlVid~~D  125 (338)
T PRK12475         99 VPVVTDVTV-EELEELVK-------EVDLIIDATD  125 (338)
T ss_pred             EEEeccCCH-HHHHHHhc-------CCCEEEEcCC
Confidence            888888763 34444432       4577766653

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.75  E-value=0.00016  Score=53.77  Aligned_cols=77  Identities=19%  Similarity=0.289  Sum_probs=55.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+++++++|+|+ |++|.++++.|.+.| .+|++++|+.++.++..+++...       .+..+..+.++.         
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-------GIAIAYLDLEEL---------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------ccceeecchhhc---------
Confidence            356789999998 899999999999996 68999999987766665554321       022333443322         


Q ss_pred             hcCCccEEEECCccCC
Q 027991          107 QHHQLNILINNAGIMG  122 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~  122 (216)
                       ....|++|++.....
T Consensus        79 -~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 -LAEADLIINTTPVGM   93 (155)
T ss_pred             -cccCCEEEeCcCCCC
Confidence             236899999988753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.74  E-value=0.00031  Score=55.03  Aligned_cols=84  Identities=15%  Similarity=0.229  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDA   86 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~   86 (216)
                      ..+.+++++|.|. ||+|..+++.|+..|. ++.++|..                   ..+++.+.+.+.+..|..++..
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            4577889999986 9999999999999997 89999876                   3455666777777777777777


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           87 MELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        87 ~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +..++++ +.+.++++       +.|++|.+..
T Consensus        96 ~~~~i~~-~~~~~~~~-------~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVTA-ENLELLIN-------NVDLVLDCTD  120 (202)
T ss_pred             ehhcCCH-HHHHHHHh-------CCCEEEECCC
Confidence            6666654 33433333       6799988764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.73  E-value=0.0012  Score=48.63  Aligned_cols=115  Identities=15%  Similarity=0.199  Sum_probs=73.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCC-eEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++.|+|++|.+|..++..|...+.  ++++.|+++++++....++....+.. .-..+..  .+.+++           .
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~-----------~   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEAL-----------K   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGGG-----------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cccccc-----------c
Confidence            588999999999999999999884  79999999877766666665543222 1112222  333333           3


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      ..|++|.++|...... .+   -.+.+..|+.    +.+...+.+.+.    .+.+.++.+|.
T Consensus        69 ~aDivvitag~~~~~g-~s---R~~ll~~N~~----i~~~~~~~i~~~----~p~~~vivvtN  119 (141)
T PF00056_consen   69 DADIVVITAGVPRKPG-MS---RLDLLEANAK----IVKEIAKKIAKY----APDAIVIVVTN  119 (141)
T ss_dssp             TESEEEETTSTSSSTT-SS---HHHHHHHHHH----HHHHHHHHHHHH----STTSEEEE-SS
T ss_pred             cccEEEEecccccccc-cc---HHHHHHHhHh----HHHHHHHHHHHh----CCccEEEEeCC
Confidence            6899999999853222 22   2344555544    445555555443    14677777765

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.70  E-value=7.4e-05  Score=65.40  Aligned_cols=78  Identities=14%  Similarity=0.243  Sum_probs=52.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++|||+++ +|.++++.|+++|++|++.+++........+++...  +  +.+...+  +...+   ++     
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~~--~~~~~---~~-----   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICGS--HPLEL---LD-----   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeCC--CCHHH---hc-----
Confidence            36789999999975 999999999999999999998765444444444432  2  2222211  11111   11     


Q ss_pred             cCCccEEEECCccC
Q 027991          108 HHQLNILINNAGIM  121 (216)
Q Consensus       108 ~~~id~li~~Ag~~  121 (216)
                       ..+|++|+++|+.
T Consensus        67 -~~~d~vV~s~gi~   79 (447)
T PRK02472         67 -EDFDLMVKNPGIP   79 (447)
T ss_pred             -CcCCEEEECCCCC
Confidence             1489999999985

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.67  E-value=0.00023  Score=62.39  Aligned_cols=109  Identities=14%  Similarity=0.053  Sum_probs=69.2

Q ss_pred             EeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccEEE
Q 027991           36 VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILI  115 (216)
Q Consensus        36 ItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li  115 (216)
                      |+||++|+|.++++.+...|++|+.+.+...+..                                   .....+++.+|
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-----------------------------------~~~~~~~~~~~   87 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-----------------------------------AGWGDRFGALV   87 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc-----------------------------------cCcCCcccEEE
Confidence            7888899999999999999999998765533110                                   00011333333


Q ss_pred             ECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccc
Q 027991          116 NNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSF  195 (216)
Q Consensus       116 ~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y  195 (216)
                      +-+.-.     .+.++        +.+.+..++..++.|.       +.|+||+++|..+..+             ...|
T Consensus        88 ~d~~~~-----~~~~~--------l~~~~~~~~~~l~~l~-------~~griv~i~s~~~~~~-------------~~~~  134 (450)
T PRK08261         88 FDATGI-----TDPAD--------LKALYEFFHPVLRSLA-------PCGRVVVLGRPPEAAA-------------DPAA  134 (450)
T ss_pred             EECCCC-----CCHHH--------HHHHHHHHHHHHHhcc-------CCCEEEEEccccccCC-------------chHH
Confidence            222110     01222        1233456677777775       3689999998755421             1258


Q ss_pred             hHHHHHHHHHHHHHHhh
Q 027991          196 QSSALLLLLLLHLLFFL  212 (216)
Q Consensus       196 ~~ska~~~~l~~~~~~~  212 (216)
                      +.+|+++.++++.+...
T Consensus       135 ~~akaal~gl~rsla~E  151 (450)
T PRK08261        135 AAAQRALEGFTRSLGKE  151 (450)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999988654

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.65  E-value=0.0001  Score=55.88  Aligned_cols=84  Identities=17%  Similarity=0.179  Sum_probs=62.6

Q ss_pred             ccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        22 ~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      .+...+.|.++.++|.||+|--|..+.+++++++  .+|+++.|++.....+         ...+.....|++..++...
T Consensus         9 klrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~~a~   79 (238)
T KOG4039|consen    9 KLREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQLAT   79 (238)
T ss_pred             HHHHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHHHHh
Confidence            4455677888999999999999999999999998  4899999985322211         3456666777776555433


Q ss_pred             HHHHHHhhcCCccEEEECCccC
Q 027991          100 FASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      -       +.++|+++++-|..
T Consensus        80 ~-------~qg~dV~FcaLgTT   94 (238)
T KOG4039|consen   80 N-------EQGPDVLFCALGTT   94 (238)
T ss_pred             h-------hcCCceEEEeeccc
Confidence            2       24899999998865

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.65  E-value=0.00059  Score=57.36  Aligned_cols=80  Identities=19%  Similarity=0.273  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+++|+|++|++|..+++.+...|++|+.+.++.++.+...+.+     +... +  .|..+.++..+.+.+.. . +
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~~-v--i~~~~~~~~~~~i~~~~-~-~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFDD-A--FNYKEEPDLDAALKRYF-P-N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCce-e--EEcCCcccHHHHHHHhC-C-C
Confidence            5789999999999999999999999999999888876644433222     2211 1  23222223333333332 2 4


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            7999999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.64  E-value=0.0011  Score=58.92  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=71.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH-------------H
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-------------A   95 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-------------~   95 (216)
                      ..+.+|+|+|+ |.+|+..+..+...|++|+++|++.++.+...+ +     +.+.  +..|..++             +
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~~--v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAEF--LELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCeE--EEeccccccccccchhhhcchh
Confidence            35789999998 999999999999999999999999876554332 2     3332  22233221             1


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991           96 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      ..++..+.+.+..++.|++|.++|+.+...                 +..+++.++..|+       ++|.|+.++..
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mk-------pGgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMK-------PGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcC-------CCCEEEEEccC
Confidence            111112222333357999999999854211                 1123456666666       47888888863

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.63  E-value=0.00058  Score=57.41  Aligned_cols=115  Identities=13%  Similarity=0.098  Sum_probs=68.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHH-HH-HHH--
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VR-NFA--  101 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~-~~~--  101 (216)
                      ++.|+|++|.+|..++..|+.+|.       ++++.|++++..              .......|+.|... .. ..+  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence            478999999999999999998663       599999875420              12233445444331 10 000  


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      ....+.....|++|++||.....    .++..+.+..|+.    +++.+.+.+.+..   .+.+.||++|.
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~----~~tr~~ll~~N~~----i~k~i~~~i~~~~---~~~~iiivvsN  126 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKE----GMERRDLLSKNVK----IFKEQGRALDKLA---KKDCKVLVVGN  126 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCC----CCcHHHHHHHHHH----HHHHHHHHHHhhC---CCCeEEEEeCC
Confidence            01123345789999999985322    2335666666654    4555555555420   13566666665

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.63  E-value=0.0024  Score=53.24  Aligned_cols=115  Identities=15%  Similarity=0.197  Sum_probs=73.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++.|.|+ |++|..++..|+..|  .+|++++++.++++.....+.....  ........   .+.+++          
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~l----------   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSDC----------   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHHh----------
Confidence            36788886 999999999999999  5899999999888877777755431  11222221   232222          


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                       ...|++|+++|...... ++.   .+.+..|..    +++...+.+.+.    .+.+.|+++|.-
T Consensus        67 -~~aDIVIitag~~~~~g-~~R---~dll~~N~~----i~~~~~~~i~~~----~~~~~vivvsNP  119 (306)
T cd05291          67 -KDADIVVITAGAPQKPG-ETR---LDLLEKNAK----IMKSIVPKIKAS----GFDGIFLVASNP  119 (306)
T ss_pred             -CCCCEEEEccCCCCCCC-CCH---HHHHHHHHH----HHHHHHHHHHHh----CCCeEEEEecCh
Confidence             36899999999853321 222   234444543    445555555543    146677777763

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.58  E-value=0.00077  Score=57.12  Aligned_cols=81  Identities=17%  Similarity=0.231  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.++||.|++|++|..+++.....|++|+.++++.++.+.+.+++     +... ++  |-.+.+.+.+.+.+...  +
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~-vi--~~~~~~~~~~~i~~~~~--~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDE-AF--NYKEEPDLDAALKRYFP--E  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCE-EE--ECCCcccHHHHHHHHCC--C
Confidence            5789999999999999999999999999998888766544332222     2221 12  32222233333333322  4


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|+++.+.|.
T Consensus       228 gvD~v~d~vG~  238 (348)
T PLN03154        228 GIDIYFDNVGG  238 (348)
T ss_pred             CcEEEEECCCH
Confidence            79999998873

>cd00704 MDH Malate dehydrogenase

Probab=97.57  E-value=0.00094  Score=56.12  Aligned_cols=113  Identities=13%  Similarity=0.117  Sum_probs=66.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCC--cchHHHHHHHHhhcCCCeEEEEEccCCCHH--HHH--H
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLA--SVR--N   99 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~--~~~--~   99 (216)
                      ++.|||++|.+|..++..|+.+|.       ++++.|+++  +.++                ....|+.+..  ...  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~----------------g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE----------------GVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc----------------eeeeehhhhcccccCCcE
Confidence            589999999999999999998763       499999986  4322                2333443321  000  0


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      ......+.....|++|+.||...... .+   =.+.+..|+    -+++.+.+.+.+..   .+.+.+|++|.
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~~g-~t---R~dll~~N~----~i~~~i~~~i~~~~---~~~~iiivvsN  127 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRKPG-ME---RADLLRKNA----KIFKEQGEALNKVA---KPTVKVLVVGN  127 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCCcC-Cc---HHHHHHHhH----HHHHHHHHHHHHhC---CCCeEEEEeCC
Confidence            00112233347899999999863322 12   233455554    45566666665431   13566777764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.55  E-value=0.00098  Score=53.20  Aligned_cols=84  Identities=18%  Similarity=0.289  Sum_probs=61.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+.+++++|.|. ||+|..+++.|+..|. ++.++|..                   ..+.+.+.+.+++..|..++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            467889999986 9999999999999997 78887432                   23456667777777777777777


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCcc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      ..+++ .+.+.++++       +.|++|.+...
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d~  121 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTDN  121 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCCC
Confidence            77774 334444433       57999987663

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.55  E-value=0.00052  Score=56.16  Aligned_cols=75  Identities=17%  Similarity=0.364  Sum_probs=54.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++|+++|+|+ ||+|.+++..|++.|++|.+++|+.++.++..+++...  + .......|     +.         ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--~-~~~~~~~~-----~~---------~~  176 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--G-EIQAFSMD-----EL---------PL  176 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--C-ceEEechh-----hh---------cc
Confidence            45789999998 79999999999999999999999988877776665432  1 12221111     10         11


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                      ...|++||+.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            3589999998874

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.54  E-value=0.0016  Score=47.50  Aligned_cols=80  Identities=23%  Similarity=0.401  Sum_probs=60.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEEEcc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELD   90 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D   90 (216)
                      .++++|.|+ |++|..+++.|+..|. ++.++|..                   ..+.+...+.+.+..|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            468899987 9999999999999998 78888632                   23456677778888888889998888


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           91 LSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        91 v~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      + +++...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            8 4445555553       5699998755

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.54  E-value=0.0009  Score=55.88  Aligned_cols=80  Identities=18%  Similarity=0.271  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.++||+|++|++|..+++.....|++|+.+.++.++.+.. .+    + +... ++  |-.+.+...+.++...  .+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~----l-Ga~~-vi--~~~~~~~~~~~~~~~~--~~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KK----L-GFDV-AF--NYKTVKSLEETLKKAS--PD  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----c-CCCE-EE--eccccccHHHHHHHhC--CC
Confidence            578999999999999999999999999999998886654433 22    2 2221 12  2233223444444432  13


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|+++.+.|.
T Consensus       207 gvdvv~d~~G~  217 (325)
T TIGR02825       207 GYDCYFDNVGG  217 (325)
T ss_pred             CeEEEEECCCH
Confidence            69999998874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.51  E-value=0.0013  Score=55.32  Aligned_cols=79  Identities=18%  Similarity=0.262  Sum_probs=52.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      |.++||+||+||+|...++.....|++++++..+.++.+ ...++     +...   ..|..+++ +.+-+.++... .+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd~---vi~y~~~~-~~~~v~~~t~g-~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GADH---VINYREED-FVEQVRELTGG-KG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCCE---EEcCCccc-HHHHHHHHcCC-CC
Confidence            889999999999999999999999987777776655544 32222     2211   12333433 33333333221 26


Q ss_pred             ccEEEECCcc
Q 027991          111 LNILINNAGI  120 (216)
Q Consensus       111 id~li~~Ag~  120 (216)
                      +|+++...|-
T Consensus       212 vDvv~D~vG~  221 (326)
T COG0604         212 VDVVLDTVGG  221 (326)
T ss_pred             ceEEEECCCH
Confidence            9999999885

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.51  E-value=0.007  Score=50.71  Aligned_cols=117  Identities=12%  Similarity=0.181  Sum_probs=74.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCC-CeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++.|+|+ |.+|..++..++.+|.  ++++.|++.+.++....++....+- .++... .  .+.+++         
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~~---------   71 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSDC---------   71 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHHh---------
Confidence            4678999998 9999999999999996  7999999988887777777665321 122222 1  232222         


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                        ..-|++|..||....+. ++.   .+.+..|..    +.+...+.+.+.    .+.+.++++|.-
T Consensus        72 --~~adivIitag~~~k~g-~~R---~dll~~N~~----i~~~i~~~i~~~----~~~~~vivvsNP  124 (315)
T PRK00066         72 --KDADLVVITAGAPQKPG-ETR---LDLVEKNLK----IFKSIVGEVMAS----GFDGIFLVASNP  124 (315)
T ss_pred             --CCCCEEEEecCCCCCCC-CCH---HHHHHHHHH----HHHHHHHHHHHh----CCCeEEEEccCc
Confidence              26799999999853221 232   234444543    444445554443    145677777753

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.49  E-value=0.0012  Score=55.76  Aligned_cols=66  Identities=23%  Similarity=0.319  Sum_probs=51.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC---------------------cchHHHHHHHHhhcCCCeE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---------------------AAGKDVKETIVKEIPSAKV   84 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~---------------------~~~~~~~~~~~~~~~~~~~   84 (216)
                      -.+.+++|+|.|+ ||+|..+++.|+..|. ++.++|...                     .+.+.+.+.+++..|..++
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            3577889999998 9999999999999998 899998752                     3445555666666666677


Q ss_pred             EEEEccCCC
Q 027991           85 DAMELDLSS   93 (216)
Q Consensus        85 ~~~~~Dv~~   93 (216)
                      .....|++.
T Consensus        99 ~~~~~~~~~  107 (339)
T PRK07688         99 EAIVQDVTA  107 (339)
T ss_pred             EEEeccCCH
Confidence            777777654

>PRK06849 hypothetical protein; Provisional

Probab=97.47  E-value=0.0014  Score=56.44  Aligned_cols=83  Identities=13%  Similarity=0.088  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +.++|||||++..+|+.+++.|.+.|++|++++.+..........+      .....+...-.+++...+.+.++.++. 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            4689999999999999999999999999999988864432111111      112222222334444434343443333 


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|++|-...
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            5899987665

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.47  E-value=0.0012  Score=56.67  Aligned_cols=83  Identities=19%  Similarity=0.308  Sum_probs=60.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|+.                   ..+.+.+.+.+.+..|..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            467888999966 8999999999999997 79999886                   45667777777777666666666


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ...+++ +.+.++++       ..|++|++..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            555543 23333332       4677777665

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.47  E-value=0.00078  Score=55.60  Aligned_cols=51  Identities=24%  Similarity=0.259  Sum_probs=44.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhc
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI   79 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~   79 (216)
                      ..++|+++|.|+ ||.|.+++..|+..|. +|++++|+.++++...+.+....
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            456789999998 8999999999999997 79999999999888888776554

>PRK05086 malate dehydrogenase; Provisional

Probab=97.43  E-value=0.004  Score=52.11  Aligned_cols=105  Identities=18%  Similarity=0.133  Sum_probs=58.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHH-c--CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLAL-R--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~-~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++++|+||+|++|.+++..+.. .  +..+++.++++.. +...-.+...  .....+..++-.+   +.+.+       
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~--~~~~~i~~~~~~d---~~~~l-------   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHI--PTAVKIKGFSGED---PTPAL-------   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcC--CCCceEEEeCCCC---HHHHc-------
Confidence            4689999999999999998855 3  3578888887432 1111112110  1111111112222   11111       


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHH
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  153 (216)
                      ...|++|.++|......+    .-.+.+..|+...-.+.+.+.++
T Consensus        68 ~~~DiVIitaG~~~~~~~----~R~dll~~N~~i~~~ii~~i~~~  108 (312)
T PRK05086         68 EGADVVLISAGVARKPGM----DRSDLFNVNAGIVKNLVEKVAKT  108 (312)
T ss_pred             CCCCEEEEcCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHh
Confidence            368999999998643321    23445666765555555544444

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.42  E-value=0.0017  Score=51.21  Aligned_cols=83  Identities=18%  Similarity=0.286  Sum_probs=58.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC------------------cchHHHHHHHHhhcCCCeEEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      ..+++++++|.|+ ||+|..+++.|+..|. ++.++|...                  .+.+.+.+.+....|..++..+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~  102 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH  102 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            3467889999996 9999999999999997 699998762                  3445556666666666666666


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNA  118 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~A  118 (216)
                      ...+++ +...+++       .+.|++|.+.
T Consensus       103 ~~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        103 NEKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eeecCH-HHHHHHH-------cCCCEEEECC
Confidence            666654 2333333       2578888774

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.38  E-value=0.0014  Score=56.07  Aligned_cols=77  Identities=16%  Similarity=0.186  Sum_probs=54.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +.+++++|+|+ |.+|...++.+...|++|++++|+.++++....    .+ +..   +..+..+.+.+.+.+.      
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~----~~-g~~---v~~~~~~~~~l~~~l~------  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDA----EF-GGR---IHTRYSNAYEIEDAVK------  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----hc-Cce---eEeccCCHHHHHHHHc------
Confidence            45677999987 899999999999999999999998766544322    22 221   2234556565554443      


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                       ..|++|+++++.
T Consensus       230 -~aDvVI~a~~~~  241 (370)
T TIGR00518       230 -RADLLIGAVLIP  241 (370)
T ss_pred             -cCCEEEEccccC
Confidence             579999998764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.37  E-value=0.00085  Score=53.48  Aligned_cols=74  Identities=19%  Similarity=0.255  Sum_probs=58.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHH-HHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF-ASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~-~~~~~~~~~~  110 (216)
                      +.++|.|+ |-+|..+|+.|.++|++|++++++++..++...+      .....++.+|.++++.++++ ++       .
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~agi~-------~   66 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAGID-------D   66 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcCCC-------c
Confidence            35677776 8999999999999999999999998776553221      23578899999999988776 33       5


Q ss_pred             ccEEEECCc
Q 027991          111 LNILINNAG  119 (216)
Q Consensus       111 id~li~~Ag  119 (216)
                      .|++|...|
T Consensus        67 aD~vva~t~   75 (225)
T COG0569          67 ADAVVAATG   75 (225)
T ss_pred             CCEEEEeeC
Confidence            688887776

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.34  E-value=0.0002  Score=55.98  Aligned_cols=47  Identities=21%  Similarity=0.179  Sum_probs=40.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   73 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~   73 (216)
                      ..+++||+++|+|. |.+|..+++.|.+.|++|++++++.++.+...+
T Consensus        23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            45689999999999 589999999999999999999988766555444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.33  E-value=0.0041  Score=55.19  Aligned_cols=112  Identities=21%  Similarity=0.270  Sum_probs=71.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-------------HH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-------------LA   95 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-------------~~   95 (216)
                      ..+.+++|.|+ |.+|...++.+...|+.|++.+++.++.+... .+     +  ..++..|..+             .+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l-----G--a~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM-----G--AEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----C--CeEEeccccccccccccceeecCHH
Confidence            34578999997 99999999999999999999999877544322 12     2  2334444322             23


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991           96 SVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      ..++..+...++....|++|+++-+.+..                 ++.++++..+..|+       +++.||-++..
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~TalipG~~-----------------aP~Lit~emv~~MK-------pGsvIVDlA~d  286 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALIPGKP-----------------APKLITEEMVDSMK-------AGSVIVDLAAE  286 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECcccCCCC-----------------CCeeehHHHHhhCC-------CCCEEEEeeeC
Confidence            33333333445556899999999554311                 11124455566665       36778878864

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.33  E-value=0.0028  Score=54.02  Aligned_cols=84  Identities=19%  Similarity=0.244  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDA   86 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~   86 (216)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.++|...                   .+.+.+.+.+++..|..++..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            4477889999988 9999999999999997 788887542                   456677788888877777777


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           87 MELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        87 ~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +..+++.+ ...++++       +.|++|.+..
T Consensus       103 ~~~~i~~~-~~~~~~~-------~~DvVvd~~d  127 (355)
T PRK05597        103 SVRRLTWS-NALDELR-------DADVILDGSD  127 (355)
T ss_pred             EEeecCHH-HHHHHHh-------CCCEEEECCC
Confidence            77676642 3333332       4677776654

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.32  E-value=0.00073  Score=56.05  Aligned_cols=109  Identities=18%  Similarity=0.218  Sum_probs=74.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ...+|-||+|.-|.-+|++|+++|.+..+.+|+..++..+.+++     +.....+.+++  +..++++.+       +.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~~-------~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMAS-------RT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHHh-------cc
Confidence            46899999999999999999999999999999999988877776     34344444444  666666665       67


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHH-----HHHhHHHHHHHHHHHHHHHh
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFA-----TNHLGHFLLTNLLLDTMKKT  157 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~-----~N~~~~~~l~~~~~~~~~~~  157 (216)
                      ++++|++|++....   +.-...+.+     ..++|-+.+++.......++
T Consensus        73 ~VVlncvGPyt~~g---~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~  120 (382)
T COG3268          73 QVVLNCVGPYTRYG---EPLVAACAAAGTDYADITGEIMFFENSIDLYHAQ  120 (382)
T ss_pred             eEEEeccccccccc---cHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHH
Confidence            99999999863211   111111111     12455566666666664444

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.27  E-value=0.0031  Score=48.22  Aligned_cols=77  Identities=21%  Similarity=0.370  Sum_probs=51.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC------------------cchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      +++|.|+ ||+|..+++.|+..|. ++.++|...                  .+.+...+.+++..|..++..+...+++
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            3788886 9999999999999998 699998764                  2344445555555566666666555544


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECC
Q 027991           94 LASVRNFASEYNIQHHQLNILINNA  118 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~A  118 (216)
                       +.+.+++       .+.|++|.+.
T Consensus        80 -~~~~~~l-------~~~DlVi~~~   96 (174)
T cd01487          80 -NNLEGLF-------GDCDIVVEAF   96 (174)
T ss_pred             -hhHHHHh-------cCCCEEEECC
Confidence             2333333       2567777763

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.26  E-value=0.0066  Score=51.07  Aligned_cols=73  Identities=19%  Similarity=0.239  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|+|.+ |+|...++.....|++|++.+|++++.+.+.+ +     +....   .|.+|++..+++.+       
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l-----GAd~~---i~~~~~~~~~~~~~-------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L-----GADHV---INSSDSDALEAVKE-------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h-----CCcEE---EEcCCchhhHHhHh-------
Confidence            48899999997 99999999999999999999999988665443 2     33222   23334444443333       


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      .+|++|.+++
T Consensus       229 ~~d~ii~tv~  238 (339)
T COG1064         229 IADAIIDTVG  238 (339)
T ss_pred             hCcEEEECCC
Confidence            2799999998

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.26  E-value=0.00069  Score=55.71  Aligned_cols=49  Identities=16%  Similarity=0.251  Sum_probs=42.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIV   76 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~   76 (216)
                      ..+.+|+++|+|+ ||+|.+++..|...| .+|++++|+.+++++..+++.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            3577899999997 999999999999999 689999999888777766654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.25  E-value=0.001  Score=54.00  Aligned_cols=74  Identities=15%  Similarity=0.223  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++||+||++- |..+++.|.++|++|+++.++....+...        ......+..+..|.+++.+++.+-     ++|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~--------~~g~~~v~~g~l~~~~l~~~l~~~-----~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP--------IHQALTVHTGALDPQELREFLKRH-----SID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc--------ccCCceEEECCCCHHHHHHHHHhc-----CCC
Confidence            6999999997 99999999999999999988875433221        111223456667777777777653     799


Q ss_pred             EEEECCcc
Q 027991          113 ILINNAGI  120 (216)
Q Consensus       113 ~li~~Ag~  120 (216)
                      ++|+.+..
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99998874

This enzyme was found to be a monomer by gel filtration.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.24  E-value=0.0047  Score=49.88  Aligned_cols=84  Identities=13%  Similarity=0.272  Sum_probs=60.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDA   86 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~   86 (216)
                      -.+++++|+|.|+ ||+|..+++.|+..|. ++.++|...                   .+.+.+.+.+.+..|..++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            3467889999988 9999999999999996 788886432                   344555667777777777777


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           87 MELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        87 ~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +...+++ +.+.++++       ..|++|.+..
T Consensus       107 ~~~~i~~-~~~~~~~~-------~~DiVi~~~D  131 (245)
T PRK05690        107 INARLDD-DELAALIA-------GHDLVLDCTD  131 (245)
T ss_pred             EeccCCH-HHHHHHHh-------cCCEEEecCC
Confidence            7766653 33333333       5788888764

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.23  E-value=0.0012  Score=57.20  Aligned_cols=76  Identities=14%  Similarity=0.255  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+.+++++|.|+ ||.|..+++.|...|. +++++.|+.++++...+++.    ..       .+...++..+.+    
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~-------~~~~~~~l~~~l----  240 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NA-------SAHYLSELPQLI----  240 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CC-------eEecHHHHHHHh----
Confidence            3578999999998 9999999999999996 79999999777665554431    11       111222333332    


Q ss_pred             hhcCCccEEEECCccC
Q 027991          106 IQHHQLNILINNAGIM  121 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~  121 (216)
                         ...|++|++.+..
T Consensus       241 ---~~aDiVI~aT~a~  253 (414)
T PRK13940        241 ---KKADIIIAAVNVL  253 (414)
T ss_pred             ---ccCCEEEECcCCC
Confidence               3579999988843

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.23  E-value=0.0038  Score=53.44  Aligned_cols=84  Identities=18%  Similarity=0.287  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDA   86 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~   86 (216)
                      ..+++.+|+|.|+ ||+|..+++.|+..|. ++.++|..                   ..+.+.+.+.+.+..|..++..
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            3467888999988 8999999999999996 89998754                   2345566677777767667777


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           87 MELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        87 ~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +...++. +.+.++++       +.|++|.+..
T Consensus       116 ~~~~i~~-~~~~~~~~-------~~DlVid~~D  140 (370)
T PRK05600        116 LRERLTA-ENAVELLN-------GVDLVLDGSD  140 (370)
T ss_pred             eeeecCH-HHHHHHHh-------CCCEEEECCC
Confidence            7666653 33333332       4566665544

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.22  E-value=0.0051  Score=49.29  Aligned_cols=104  Identities=18%  Similarity=0.195  Sum_probs=66.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ..+.+++|+|+++ +|..+++.+...|.+|++++++.++.+.. +.+     +.. .  ..|..+.+....+.   ....
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--~~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GAD-H--VIDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCc-e--eccCCcCCHHHHHH---HhcC
Confidence            3577999999988 99999999999999999998886554332 111     211 1  12333333333332   2234


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +.+|++|+++|..                       ...+..++.+.       +.|+++.++....
T Consensus       200 ~~~d~vi~~~~~~-----------------------~~~~~~~~~l~-------~~G~~v~~~~~~~  236 (271)
T cd05188         200 GGADVVIDAVGGP-----------------------ETLAQALRLLR-------PGGRIVVVGGTSG  236 (271)
T ss_pred             CCCCEEEECCCCH-----------------------HHHHHHHHhcc-------cCCEEEEEccCCC
Confidence            5799999998742                       12333445554       4789998887544

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.22  E-value=0.0018  Score=54.40  Aligned_cols=79  Identities=19%  Similarity=0.223  Sum_probs=52.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +.++||+|++|++|..+++.....|+ +|+.+.++.++.+...+++     +... ++  |..+ +++.+.+.++..  +
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-vi--~~~~-~~~~~~i~~~~~--~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-AI--NYKT-DNVAERLRELCP--E  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-EE--ECCC-CCHHHHHHHHCC--C
Confidence            37999999999999999999999998 7999988866544433322     2222 12  2222 223333333322  4


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|+++.+.|.
T Consensus       224 gvd~vid~~g~  234 (345)
T cd08293         224 GVDVYFDNVGG  234 (345)
T ss_pred             CceEEEECCCc
Confidence            79999998874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.22  E-value=0.0047  Score=49.72  Aligned_cols=84  Identities=15%  Similarity=0.300  Sum_probs=55.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDA   86 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~   86 (216)
                      -.+++++|+|.|+ ||+|..+++.|+..|. ++.++|...                   .+.+.+.+.+.+..|..++..
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~   98 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINP   98 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3467889999987 8999999999999996 788887542                   233445556666666656665


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           87 MELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        87 ~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +...+++ +.+.++++       ..|++|.+..
T Consensus        99 ~~~~i~~-~~~~~~~~-------~~DlVvd~~D  123 (240)
T TIGR02355        99 INAKLDD-AELAALIA-------EHDIVVDCTD  123 (240)
T ss_pred             EeccCCH-HHHHHHhh-------cCCEEEEcCC
Confidence            5544433 33333332       4677776654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.20  E-value=0.0039  Score=48.78  Aligned_cols=81  Identities=20%  Similarity=0.333  Sum_probs=53.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC---Ccc---------------hHHHHHHHHhhcCCCeEEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD---IAA---------------GKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~---~~~---------------~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      .++.++++|.|+ ||+|..+++.|+..|. +|+++|++   .+.               .+...+.+....|..++..+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            467789999998 8999999999999998 79999876   211               222334444444555555555


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEC
Q 027991           89 LDLSSLASVRNFASEYNIQHHQLNILINN  117 (216)
Q Consensus        89 ~Dv~~~~~~~~~~~~~~~~~~~id~li~~  117 (216)
                      .+++. +.+.+++       ...|++|.+
T Consensus        97 ~~i~~-~~~~~~~-------~~~DlVi~a  117 (200)
T TIGR02354        97 EKITE-ENIDKFF-------KDADIVCEA  117 (200)
T ss_pred             eeCCH-hHHHHHh-------cCCCEEEEC
Confidence            55543 2333222       256777766

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.18  E-value=0.0069  Score=50.61  Aligned_cols=119  Identities=20%  Similarity=0.234  Sum_probs=68.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCC--cchHHHHHHHHhhcCCCeEEEEEccCC-CHHHHHHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~  106 (216)
                      +++.|+|++|.+|..++..|+..|.  +|++++++.  ++++....++.......... .....+ |.++    +     
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d~~~----l-----   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSDLSD----V-----   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCCHHH----h-----
Confidence            3689999999999999999999996  499999964  45444443333221111000 011112 2221    1     


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                        ...|++|.++|..... ..+.   .+.++.|+.-.    +.+.+.+.+.    .+.+.||++++..
T Consensus        71 --~~aDiViitag~p~~~-~~~r---~dl~~~n~~i~----~~~~~~i~~~----~~~~~viv~~npv  124 (309)
T cd05294          71 --AGSDIVIITAGVPRKE-GMSR---LDLAKKNAKIV----KKYAKQIAEF----APDTKILVVTNPV  124 (309)
T ss_pred             --CCCCEEEEecCCCCCC-CCCH---HHHHHHHHHHH----HHHHHHHHHH----CCCeEEEEeCCch
Confidence              3689999999985321 1222   33445555444    4444444432    1467888888744

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.18  E-value=0.0027  Score=52.39  Aligned_cols=80  Identities=16%  Similarity=0.272  Sum_probs=55.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..++|+++|.|+ ||-|++++-.|++.|. +|+++.|+.+++++..+.+...++...+.  ..|.   ..+.+..     
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~---~~~~~~~-----  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDA---RGIEDVI-----  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCH---hHHHHHH-----
Confidence            456889999998 9999999999999997 79999999888888877765443222121  1221   1222122     


Q ss_pred             hcCCccEEEECCcc
Q 027991          107 QHHQLNILINNAGI  120 (216)
Q Consensus       107 ~~~~id~li~~Ag~  120 (216)
                        ...|++||+..+
T Consensus       193 --~~~divINaTp~  204 (283)
T PRK14027        193 --AAADGVVNATPM  204 (283)
T ss_pred             --hhcCEEEEcCCC
Confidence              247999988654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.18  E-value=0.0017  Score=53.42  Aligned_cols=79  Identities=20%  Similarity=0.286  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+.+++.++|.|+ ||-+.+++..|++.|. +|.++.|+.+++++..+.+....+  .+  ...+..+.+...       
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~--~~--~~~~~~~~~~~~-------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA--AV--EAAALADLEGLE-------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc--cc--cccccccccccc-------
Confidence            3456899999998 9999999999999996 799999999998888887765421  11  112222222221       


Q ss_pred             hhcCCccEEEECCccC
Q 027991          106 IQHHQLNILINNAGIM  121 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~  121 (216)
                          ..|++||+....
T Consensus       190 ----~~dliINaTp~G  201 (283)
T COG0169         190 ----EADLLINATPVG  201 (283)
T ss_pred             ----ccCEEEECCCCC
Confidence                369999987654

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.17  E-value=0.00077  Score=60.36  Aligned_cols=48  Identities=25%  Similarity=0.347  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~   75 (216)
                      ..+++|+++|+|+ ||+|.+++..|++.|++|++++|+.+++++..+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3577899999999 69999999999999999999999877766655443

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=97.17  E-value=0.0075  Score=50.87  Aligned_cols=76  Identities=12%  Similarity=0.169  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+++++|+|+ |++|...++.+...|+ +|++++++.++.+.+. ++     +....   .|..++ ++.++    .+..
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l-----Ga~~v---i~~~~~-~~~~~----~~~~  233 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM-----GADKL---VNPQND-DLDHY----KAEK  233 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc-----CCcEE---ecCCcc-cHHHH----hccC
Confidence            5789999986 9999999999999998 6888998876654332 22     22211   233332 22222    2223


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +.+|++|.++|.
T Consensus       234 g~~D~vid~~G~  245 (343)
T PRK09880        234 GYFDVSFEVSGH  245 (343)
T ss_pred             CCCCEEEECCCC
Confidence            569999999984

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.17  E-value=0.0017  Score=53.48  Aligned_cols=48  Identities=23%  Similarity=0.245  Sum_probs=41.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIV   76 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   76 (216)
                      .+++|+++|.|+ ||.|.+++..|.+.|. +|.++.|+.+++++..+++.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            367889999987 9999999999999997 79999999888877776653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK08223 hypothetical protein; Validated

Probab=97.14  E-value=0.004  Score=51.26  Aligned_cols=66  Identities=15%  Similarity=0.203  Sum_probs=46.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDA   86 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~   86 (216)
                      -.+++.+|+|.|+ ||+|..+++.|+..|. ++.++|...                   .+.+.+.+.+.+..|..++..
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~  101 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRA  101 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            4477889999988 8999999999999996 788887542                   223444555555555556665


Q ss_pred             EEccCCC
Q 027991           87 MELDLSS   93 (216)
Q Consensus        87 ~~~Dv~~   93 (216)
                      +...++.
T Consensus       102 ~~~~l~~  108 (287)
T PRK08223        102 FPEGIGK  108 (287)
T ss_pred             EecccCc
Confidence            5555553

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.14  E-value=0.021  Score=47.94  Aligned_cols=120  Identities=13%  Similarity=0.094  Sum_probs=69.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++++.|+|+ |.+|..++..++..| .+|++.|.+++.++.....+....+  +....+ .. -+|.+.+        
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i-~~-~~d~~~l--------   71 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINI-LG-TNNYEDI--------   71 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEE-Ee-CCCHHHh--------
Confidence            35678999997 999999999999999 6899999988765432222221110  111111 11 1232222        


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                         ..-|++|.++|...... ++   -.+.+..|.    -+.+.+.+.+.+.    .+.+.+|++|...
T Consensus        72 ---~~ADiVVitag~~~~~g-~~---r~dll~~n~----~i~~~i~~~i~~~----~p~a~vivvsNP~  125 (319)
T PTZ00117         72 ---KDSDVVVITAGVQRKEE-MT---REDLLTING----KIMKSVAESVKKY----CPNAFVICVTNPL  125 (319)
T ss_pred             ---CCCCEEEECCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecChH
Confidence               26799999999853221 22   234555565    3445555555443    1355677776533

>PRK08328 hypothetical protein; Provisional

Probab=97.13  E-value=0.0068  Score=48.50  Aligned_cols=38  Identities=24%  Similarity=0.298  Sum_probs=32.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI   65 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~   65 (216)
                      -.+++++++|.|+ ||+|.++++.|+..|. ++.++|...
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            3467888999987 8999999999999997 788887553

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.12  E-value=0.0036  Score=51.32  Aligned_cols=80  Identities=14%  Similarity=0.261  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++++|+|+++++|..+++.+...|++|++++++.++.+.. +.+     +..   ...|..+.+...++.+ ... .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~-~~~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKE-ATG-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHH-HhC-CC
Confidence            578999999999999999999999999999998876554433 211     221   1234444333333332 222 24


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            69999999884

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.12  E-value=0.0067  Score=50.96  Aligned_cols=155  Identities=12%  Similarity=-0.022  Sum_probs=87.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCCcc--hHHHHHHHHhhc-CC-CeEEEEEccCCCHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIAA--GKDVKETIVKEI-PS-AKVDAMELDLSSLASVRN   99 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~~~--~~~~~~~~~~~~-~~-~~~~~~~~Dv~~~~~~~~   99 (216)
                      .+++.|+|++|.+|..++..++.+|.       ++++.|.+++.  ++-....+.... +- .++.+ .  -.+.++   
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~~~~---   75 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDPNVA---   75 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCcHHH---
Confidence            46899999999999999999998884       69999986433  443333343321 10 11111 1  112222   


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                              ...-|++|.+||...... .+.   .+.+..|+    -+++.+.+.+.+..   .+.+.||++|.-.-.+..
T Consensus        76 --------~~daDivvitaG~~~k~g-~tR---~dll~~N~----~i~~~i~~~i~~~~---~~~~iiivvsNPvD~~t~  136 (322)
T cd01338          76 --------FKDADWALLVGAKPRGPG-MER---ADLLKANG----KIFTAQGKALNDVA---SRDVKVLVVGNPCNTNAL  136 (322)
T ss_pred             --------hCCCCEEEEeCCCCCCCC-CcH---HHHHHHHH----HHHHHHHHHHHhhC---CCCeEEEEecCcHHHHHH
Confidence                    236899999999853321 232   33455554    45566666665531   025677777753322211


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ..+ .++....+...|+.++.-..-|...++.
T Consensus       137 ~~~-k~sg~~p~~~ViG~t~LDs~Rl~~~la~  167 (322)
T cd01338         137 IAM-KNAPDIPPDNFTAMTRLDHNRAKSQLAK  167 (322)
T ss_pred             HHH-HHcCCCChHheEEehHHHHHHHHHHHHH
Confidence            111 0111234455788888777777766654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.10  E-value=0.025  Score=47.00  Aligned_cols=40  Identities=33%  Similarity=0.409  Sum_probs=35.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~   67 (216)
                      ..+.+++++|.|. |++|..+++.|...|++|++++|+.++
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4567999999997 789999999999999999999999654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.09  E-value=0.0075  Score=49.12  Aligned_cols=118  Identities=19%  Similarity=0.189  Sum_probs=70.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC----CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           34 AIVTGATSGIGTETARVLALRG----VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +.|+|++|.+|..++..|+..|    .+|++.|+++++++....++.......  .....-.++  +..+.+       .
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~--d~~~~~-------~   69 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITD--DPYEAF-------K   69 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECC--chHHHh-------C
Confidence            4689998899999999999999    689999999988877777765543111  001111122  112222       2


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      ..|++|..+|......+ +.   .+.+.-|    .-+.+...+.+.+.    .+.+.++++|.-.
T Consensus        70 ~aDiVv~t~~~~~~~g~-~r---~~~~~~n----~~i~~~i~~~i~~~----~p~a~~i~~tNP~  122 (263)
T cd00650          70 DADVVIITAGVGRKPGM-GR---LDLLKRN----VPIVKEIGDNIEKY----SPDAWIIVVSNPV  122 (263)
T ss_pred             CCCEEEECCCCCCCcCC-CH---HHHHHHH----HHHHHHHHHHHHHH----CCCeEEEEecCcH
Confidence            68999999998643221 11   1222223    33445555555443    1456777776533

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.08  E-value=0.003  Score=51.93  Aligned_cols=80  Identities=13%  Similarity=0.221  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++++|+|+++++|.++++.+...|.+|++++++.++.+..    .. . +.+.   .+|..+.+..+++.+.. . ..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~-~-g~~~---~~~~~~~~~~~~~~~~~-~-~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV----RQ-A-GADA---VFNYRAEDLADRILAAT-A-GQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c-CCCE---EEeCCCcCHHHHHHHHc-C-CC
Confidence            578999999999999999999999999999998886554433    11 1 2211   13444444333333222 1 23


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++++++|.
T Consensus       213 ~~d~vi~~~~~  223 (325)
T cd08253         213 GVDVIIEVLAN  223 (325)
T ss_pred             ceEEEEECCch
Confidence            69999999873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.06  E-value=0.0038  Score=53.01  Aligned_cols=81  Identities=16%  Similarity=0.270  Sum_probs=54.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      -+|+.+||.||+||.|.+.++.....|+..+++..+.++.+- .+    .+ +..   ...|..+++-.+ .+.+..  .
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l-~k----~l-GAd---~vvdy~~~~~~e-~~kk~~--~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL-VK----KL-GAD---EVVDYKDENVVE-LIKKYT--G  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH-HH----Hc-CCc---EeecCCCHHHHH-HHHhhc--C
Confidence            457799999999999999999999999666666666555432 22    22 211   234666744333 333321  5


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                      +++|+++.+.|-.
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence            6899999999863

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.05  E-value=0.0082  Score=44.13  Aligned_cols=79  Identities=20%  Similarity=0.278  Sum_probs=54.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEEEccCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   92 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   92 (216)
                      +++|.|. ||+|.++++.|+..|. ++.++|..                   ..+.+...+.+++..|..++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            3788887 9999999999999997 78888644                   1334555666666666667777766665


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCcc
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      +... .+.       +.+.|++|.+...
T Consensus        80 ~~~~-~~~-------~~~~diVi~~~d~   99 (143)
T cd01483          80 EDNL-DDF-------LDGVDLVIDAIDN   99 (143)
T ss_pred             hhhH-HHH-------hcCCCEEEECCCC
Confidence            4332 122       2367888877663

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.05  E-value=0.0091  Score=46.61  Aligned_cols=83  Identities=18%  Similarity=0.314  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC---------------------cchHHHHHHHHhhcCCCeEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---------------------AAGKDVKETIVKEIPSAKVD   85 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~---------------------~~~~~~~~~~~~~~~~~~~~   85 (216)
                      .+++.+++|.|. ||+|.++++.|+..|. ++.++|...                     .+.+.+.+.+++..|..++.
T Consensus        16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~   94 (198)
T cd01485          16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS   94 (198)
T ss_pred             HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence            356788999977 6799999999999997 688887441                     12334455566666677777


Q ss_pred             EEEccCCC-HHHHHHHHHHHHhhcCCccEEEECC
Q 027991           86 AMELDLSS-LASVRNFASEYNIQHHQLNILINNA  118 (216)
Q Consensus        86 ~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li~~A  118 (216)
                      .+..++.+ .+...++++       ..|++|.+-
T Consensus        95 ~~~~~~~~~~~~~~~~~~-------~~dvVi~~~  121 (198)
T cd01485          95 IVEEDSLSNDSNIEEYLQ-------KFTLVIATE  121 (198)
T ss_pred             EEecccccchhhHHHHHh-------CCCEEEECC
Confidence            76666653 223333332       568777663

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK14968 putative methyltransferase; Provisional

Probab=97.05  E-value=0.012  Score=44.99  Aligned_cols=79  Identities=22%  Similarity=0.135  Sum_probs=52.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCe-EEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK-VDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++++|-.|++.|.   ++..++.++.+|+.++.+++..+.+.+.+.......+ +.++.+|+.+..         .. 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------RG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------cc-
Confidence            356788888877665   4455555588999999998777666665544321112 788888875421         11 


Q ss_pred             cCCccEEEECCccC
Q 027991          108 HHQLNILINNAGIM  121 (216)
Q Consensus       108 ~~~id~li~~Ag~~  121 (216)
                       +.+|+++.|....
T Consensus        89 -~~~d~vi~n~p~~  101 (188)
T PRK14968         89 -DKFDVILFNPPYL  101 (188)
T ss_pred             -cCceEEEECCCcC
Confidence             2689999987764

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.03  E-value=0.0038  Score=54.89  Aligned_cols=77  Identities=16%  Similarity=0.130  Sum_probs=53.0

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           28 DGSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        28 ~~~~k~~lItG~----------------s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      +++||++|||+|                ||-.|++||+.+..+|++|.++.-... +.         . ...+..+  ++
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~---------~-p~~v~~i--~V  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA---------D-PQGVKVI--HV  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC---------C-CCCceEE--Ee
Confidence            489999999998                467999999999999999999864322 10         1 2234443  34


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccC
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      ...++   +.+.+.+.+. .|++|++|++.
T Consensus       320 ~ta~e---M~~av~~~~~-~Di~I~aAAVa  345 (475)
T PRK13982        320 ESARQ---MLAAVEAALP-ADIAIFAAAVA  345 (475)
T ss_pred             cCHHH---HHHHHHhhCC-CCEEEEecccc
Confidence            44444   4444444443 69999999975

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.02  E-value=0.0032  Score=52.02  Aligned_cols=41  Identities=27%  Similarity=0.338  Sum_probs=36.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~   68 (216)
                      .+++|++++|+|. |++|..+++.|...|++|++.+|+.++.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~  187 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL  187 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            4788999999999 7899999999999999999999987643

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.02  E-value=0.0068  Score=47.30  Aligned_cols=82  Identities=20%  Similarity=0.266  Sum_probs=57.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++++|.|. ||+|.++++.|+..|. ++.++|..                   ..+.+.+.+.+++..|..++...
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            366788999975 7799999999999997 68888743                   12345566677777777777777


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ...+++  ...+++       .+.|++|.+..
T Consensus        97 ~~~~~~--~~~~~~-------~~~dvVi~~~~  119 (197)
T cd01492          97 TDDISE--KPEEFF-------SQFDVVVATEL  119 (197)
T ss_pred             ecCccc--cHHHHH-------hCCCEEEECCC
Confidence            766652  122222       36788887643

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.01  E-value=0.0044  Score=51.44  Aligned_cols=75  Identities=23%  Similarity=0.266  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++.++.+..    .. . +.. .++  |..   ++.+.+.+    ..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~-~-~~~-~~~--~~~---~~~~~~~~----~~  225 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KE-L-GAD-YVI--DGS---KFSEDVKK----LG  225 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HH-c-CCc-EEE--ecH---HHHHHHHh----cc
Confidence            467899999999999999999999999999988876543332    11 1 211 111  221   12222222    23


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++++++|.
T Consensus       226 ~~d~v~~~~g~  236 (332)
T cd08259         226 GADVVIELVGS  236 (332)
T ss_pred             CCCEEEECCCh
Confidence            79999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.01  E-value=0.04  Score=46.33  Aligned_cols=124  Identities=14%  Similarity=0.103  Sum_probs=70.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhc--CCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +++.+++.|+|+ |.+|..++..++.+|. +|+++|.+++.++.....+....  .+....+..  .+|.+++       
T Consensus         3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~l-------   72 (321)
T PTZ00082          3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYEDI-------   72 (321)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHHh-------
Confidence            455678999995 8899999999999995 89999999876432222221111  011122221  1232221       


Q ss_pred             HhhcCCccEEEECCccCCCCCC--CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          105 NIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~--~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                          ..-|++|.++|......+  .+. .-.+.+..|+.    +.+.+.+.+.+.    .+.+.++++|...
T Consensus        73 ----~~aDiVI~tag~~~~~~~~~~~~-~r~~~l~~n~~----i~~~i~~~i~~~----~p~a~~iv~sNP~  131 (321)
T PTZ00082         73 ----AGSDVVIVTAGLTKRPGKSDKEW-NRDDLLPLNAK----IMDEVAEGIKKY----CPNAFVIVITNPL  131 (321)
T ss_pred             ----CCCCEEEECCCCCCCCCCCcCCC-CHHHHHHHHHH----HHHHHHHHHHHH----CCCeEEEEecCcH
Confidence                267999999998643221  111 12344555543    455555555543    1345677776544

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.94  E-value=0.046  Score=45.75  Aligned_cols=117  Identities=14%  Similarity=0.038  Sum_probs=73.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCe-EEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAK-VDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++.|+|+ |.+|..++..++..|-  +++++|.+.+.++-...++....+-.. ..+...  .|.+++           
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~~-----------   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSVT-----------   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHHh-----------
Confidence            57899996 9999999999998884  799999998877666666665532111 111211  233322           


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      ...|++|.+||..... .++.   .+.+..|+    -+.+.+.+.+.+.    .+++.++++|.-.
T Consensus        70 ~~adivvitaG~~~k~-g~~R---~dll~~N~----~i~~~~~~~i~~~----~p~~~vivvsNP~  123 (312)
T cd05293          70 ANSKVVIVTAGARQNE-GESR---LDLVQRNV----DIFKGIIPKLVKY----SPNAILLVVSNPV  123 (312)
T ss_pred             CCCCEEEECCCCCCCC-CCCH---HHHHHHHH----HHHHHHHHHHHHh----CCCcEEEEccChH
Confidence            2679999999985332 2232   23444443    3455555555543    2567778777643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.93  E-value=0.0091  Score=48.79  Aligned_cols=84  Identities=21%  Similarity=0.256  Sum_probs=56.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++.+++|.|+ ||+|..+++.|+..| .++.++|...                   .+.+...+.+...+|..++..+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            467888999987 899999999999999 4888887441                   1223455666666666666665


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      . +.-+++...+++.      ...|++|.+..
T Consensus       106 ~-~~i~~e~~~~ll~------~~~D~VIdaiD  130 (268)
T PRK15116        106 D-DFITPDNVAEYMS------AGFSYVIDAID  130 (268)
T ss_pred             e-cccChhhHHHHhc------CCCCEEEEcCC
Confidence            3 3333444444432      25788887765

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.91  E-value=0.0081  Score=49.69  Aligned_cols=49  Identities=20%  Similarity=0.235  Sum_probs=39.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCc---chHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIV   76 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~   76 (216)
                      ..+++|+++|.|+ ||-+.+++-.|+..|. +|.++.|+.+   +++...+.+.
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            4568899999997 7779999999999996 7999999854   5666655554

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.90  E-value=0.029  Score=47.42  Aligned_cols=41  Identities=27%  Similarity=0.213  Sum_probs=35.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      .|.+++|.|+ |++|...++.+...|++|++++++.++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999999999999999998887765543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.89  E-value=0.0043  Score=51.14  Aligned_cols=39  Identities=23%  Similarity=0.279  Sum_probs=35.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      ..+++||.++|.|.++-.|+.++..|.++|++|.++.|.
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            467899999999997779999999999999999998774

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.89  E-value=0.0086  Score=47.90  Aligned_cols=84  Identities=21%  Similarity=0.267  Sum_probs=58.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++++|.|. ||+|..+++.|+..|. ++.++|...                   .+.+...+.+....|..++..+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            356788999987 8999999999999997 888887432                   2445556777777777777777


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ...++. +...+++.      ...|++|.+..
T Consensus        87 ~~~i~~-~~~~~l~~------~~~D~VvdaiD  111 (231)
T cd00755          87 EEFLTP-DNSEDLLG------GDPDFVVDAID  111 (231)
T ss_pred             eeecCH-hHHHHHhc------CCCCEEEEcCC
Confidence            665553 33333332      24788777654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.89  E-value=0.009  Score=51.56  Aligned_cols=49  Identities=20%  Similarity=0.326  Sum_probs=42.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIV   76 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   76 (216)
                      .+++++++||.|+ |-+|.-+++.|.++|. +|++..|+.+++++..+++.
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            3478999999998 8899999999999995 79999999998887777664

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.85  E-value=0.034  Score=48.63  Aligned_cols=115  Identities=13%  Similarity=0.094  Sum_probs=74.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-------CC--eEEEEEcCCcchHHHHHHHHhhc-CCC-eEEEEEccCCCHHHHHHHH
Q 027991           33 TAIVTGATSGIGTETARVLALR-------GV--HVVMGVRDIAAGKDVKETIVKEI-PSA-KVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~-------g~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~-~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ++.|+|++|.+|.+++-.|+..       |.  +++++++++++++-...++.... +-. ++. +..  .+.+++    
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye~~----  174 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYEVF----  174 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHHHh----
Confidence            6999999999999999999988       64  79999999999887777776653 111 111 111  233332    


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                             ..-|++|..||...... ++   =.+.++.|+.    +++...+.+.+.   ..+.+.||++|.
T Consensus       175 -------kdaDiVVitAG~prkpG-~t---R~dLl~~N~~----I~k~i~~~I~~~---a~p~~ivIVVsN  227 (444)
T PLN00112        175 -------QDAEWALLIGAKPRGPG-ME---RADLLDINGQ----IFAEQGKALNEV---ASRNVKVIVVGN  227 (444)
T ss_pred             -------CcCCEEEECCCCCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHh---cCCCeEEEEcCC
Confidence                   36899999999853221 22   2345566644    455555555541   014677777775

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.84  E-value=0.0086  Score=47.02  Aligned_cols=40  Identities=18%  Similarity=0.257  Sum_probs=35.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..++++||+|+|.|| |.+|..-++.|++.|++|.+++...
T Consensus         3 ~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~   42 (205)
T TIGR01470         3 VFANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL   42 (205)
T ss_pred             eEEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            345689999999998 8999999999999999999998654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.84  E-value=0.0052  Score=51.12  Aligned_cols=78  Identities=15%  Similarity=0.293  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.++||+||+|++|..+++.....|++|+.+.++.++.+.+.    + + +... ++  |-.+++ +.+.+.+...  +
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~----~-~-Ga~~-vi--~~~~~~-~~~~v~~~~~--~  210 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK----E-L-GFDA-VF--NYKTVS-LEEALKEAAP--D  210 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-c-CCCE-EE--eCCCcc-HHHHHHHHCC--C
Confidence            5789999999999999999999999999999888866544332    2 2 2221 12  333322 2222333221  4


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|+++.+.|
T Consensus       211 gvd~vld~~g  220 (329)
T cd08294         211 GIDCYFDNVG  220 (329)
T ss_pred             CcEEEEECCC
Confidence            6899998877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.84  E-value=0.0093  Score=49.80  Aligned_cols=79  Identities=24%  Similarity=0.353  Sum_probs=52.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEEEccCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLS   92 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~   92 (216)
                      +++|+|+ ||+|.++++.|+..|. ++.++|...                   .+++.+.+.+++..|..++.....+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            3788886 9999999999999997 788887432                   234455566666666667777777776


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +.....+++       .+.|++|++..
T Consensus        80 ~~~~~~~f~-------~~~DvVv~a~D   99 (312)
T cd01489          80 DPDFNVEFF-------KQFDLVFNALD   99 (312)
T ss_pred             CccchHHHH-------hcCCEEEECCC
Confidence            632222222       25677776543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN02602 lactate dehydrogenase

Probab=96.83  E-value=0.055  Score=46.03  Aligned_cols=118  Identities=13%  Similarity=0.072  Sum_probs=73.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +++.|+|+ |.+|..++..++.+|.  ++++.|.++++++-...++....+-....-+.. -.+.+++           .
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~~dy~~~-----------~  104 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-STDYAVT-----------A  104 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-CCCHHHh-----------C
Confidence            68999996 9999999999998884  799999998877766666665432111111211 1222222           3


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      .-|++|.+||...... ++.   .+.+..|+    -+++.+.+.+.+.    .+.+.+|++|.-.
T Consensus       105 daDiVVitAG~~~k~g-~tR---~dll~~N~----~I~~~i~~~I~~~----~p~~ivivvtNPv  157 (350)
T PLN02602        105 GSDLCIVTAGARQIPG-ESR---LNLLQRNV----ALFRKIIPELAKY----SPDTILLIVSNPV  157 (350)
T ss_pred             CCCEEEECCCCCCCcC-CCH---HHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecCch
Confidence            6799999999853321 222   23344443    3455555555543    2467788887633

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.82  E-value=0.011  Score=51.54  Aligned_cols=45  Identities=22%  Similarity=0.375  Sum_probs=38.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKE   73 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~   73 (216)
                      .+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++++...+
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~  222 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK  222 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            478899999997 999999999999999 689999999776554443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.80  E-value=0.0055  Score=53.66  Aligned_cols=73  Identities=19%  Similarity=0.165  Sum_probs=52.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++|.|+ |.+|..+++.|.++|++|++++++.+..+...+       ...+.++.+|.++.+.++++      ...+.|
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~-------~~~~~~~~gd~~~~~~l~~~------~~~~a~   67 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD-------RLDVRTVVGNGSSPDVLREA------GAEDAD   67 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh-------hcCEEEEEeCCCCHHHHHHc------CCCcCC
Confidence            5788887 999999999999999999999998776544322       12366777888887766554      112466


Q ss_pred             EEEECCc
Q 027991          113 ILINNAG  119 (216)
Q Consensus       113 ~li~~Ag  119 (216)
                      .+|....
T Consensus        68 ~vi~~~~   74 (453)
T PRK09496         68 LLIAVTD   74 (453)
T ss_pred             EEEEecC
Confidence            6666543

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.78  E-value=0.04  Score=46.35  Aligned_cols=116  Identities=14%  Similarity=0.050  Sum_probs=68.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCC--cchHHHHHHHHhhc-CCC-eEEEEEccCCCHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEI-PSA-KVDAMELDLSSLASVRNF  100 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~-~~~-~~~~~~~Dv~~~~~~~~~  100 (216)
                      -++.|+|++|.+|..++..|..+|.       ++++.|.++  ++++-....+.... +.. ... +.  -.+.++    
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~--~~~~~~----   76 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-AT--TDPEEA----   76 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Ee--cChHHH----
Confidence            3689999999999999999998883       799999965  33555555554332 110 111 11  012222    


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                             ...-|++|.+||......    ++=.+.+..|+.    +++.+.+.+.+...   +.+.|+++|.
T Consensus        77 -------~~daDvVVitAG~~~k~g----~tR~dll~~Na~----i~~~i~~~i~~~~~---~~~iiivvsN  130 (323)
T TIGR01759        77 -------FKDVDAALLVGAFPRKPG----MERADLLSKNGK----IFKEQGKALNKVAK---KDVKVLVVGN  130 (323)
T ss_pred             -------hCCCCEEEEeCCCCCCCC----CcHHHHHHHHHH----HHHHHHHHHHhhCC---CCeEEEEeCC
Confidence                   236799999999853221    223445666654    44445555444310   2567777765

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.77  E-value=0.0073  Score=52.71  Aligned_cols=46  Identities=30%  Similarity=0.485  Sum_probs=38.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKET   74 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~   74 (216)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++++...+.
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            478899999987 9999999999999997 799999987766554443

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.77  E-value=0.041  Score=46.82  Aligned_cols=75  Identities=13%  Similarity=0.182  Sum_probs=48.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|.|+ |++|..+++.....|++|++++.+.++.....+++     +... +  .|..+.+.+.+    .   .+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~-----Ga~~-v--i~~~~~~~~~~----~---~~  246 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL-----GADS-F--LVSTDPEKMKA----A---IG  246 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC-----CCcE-E--EcCCCHHHHHh----h---cC
Confidence            5778999765 99999999999999999988877765543333222     2221 1  13333322222    1   23


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.+.|.
T Consensus       247 ~~D~vid~~g~  257 (360)
T PLN02586        247 TMDYIIDTVSA  257 (360)
T ss_pred             CCCEEEECCCC
Confidence            68999998883

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.75  E-value=0.016  Score=46.40  Aligned_cols=79  Identities=23%  Similarity=0.331  Sum_probs=50.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           34 AIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      ++|.|+ ||+|.++++.|+..|. ++.++|...                   .+++.+.+.+++..|..++.....++++
T Consensus         2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            678875 9999999999999997 788887542                   2234445555555666667767666655


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ++....      +.+.++|++|.+..
T Consensus        81 ~~~~~~------~f~~~~DvVi~a~D  100 (234)
T cd01484          81 EQDFND------TFFEQFHIIVNALD  100 (234)
T ss_pred             hhhchH------HHHhCCCEEEECCC
Confidence            332211      11235677777643

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.75  E-value=0.0048  Score=46.91  Aligned_cols=39  Identities=26%  Similarity=0.322  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      .++++|+++|+|++.-.|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999966679999999999999999988873

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.73  E-value=0.0089  Score=44.90  Aligned_cols=39  Identities=15%  Similarity=0.081  Sum_probs=34.7

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV   62 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~   62 (216)
                      .+..++++||.|+|.|| |.+|...++.|++.|++|.+++
T Consensus         5 ~P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          5 YPLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             cceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            34457899999999998 8999999999999999998885

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.73  E-value=0.01  Score=53.82  Aligned_cols=61  Identities=23%  Similarity=0.337  Sum_probs=44.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC----------------------cchHHHHHHHHhhcCCCeEE
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI----------------------AAGKDVKETIVKEIPSAKVD   85 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~   85 (216)
                      +++.+|||.|+ ||+|-.+++.|+..|. +++++|...                      .+++.+.+.+++.+|..++.
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            46778999998 9999999999999997 788886431                      23344556666666666666


Q ss_pred             EEEcc
Q 027991           86 AMELD   90 (216)
Q Consensus        86 ~~~~D   90 (216)
                      .+...
T Consensus       415 ~~~~~  419 (664)
T TIGR01381       415 GHRLT  419 (664)
T ss_pred             Eeeee
Confidence            65555

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PLN00203 glutamyl-tRNA reductase

Probab=96.66  E-value=0.015  Score=51.99  Aligned_cols=80  Identities=15%  Similarity=0.220  Sum_probs=55.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+.+++++|.|+ |.+|..+++.|...|. +|+++.|+.++++...+++    ++..+.+  .++   ++..+.+.    
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~----~g~~i~~--~~~---~dl~~al~----  328 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF----PDVEIIY--KPL---DEMLACAA----  328 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh----CCCceEe--ecH---hhHHHHHh----
Confidence            377899999999 9999999999999997 7999999987766655433    2222221  122   23333332    


Q ss_pred             hcCCccEEEECCccCCCC
Q 027991          107 QHHQLNILINNAGIMGTP  124 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~  124 (216)
                         ..|++|.+.+...|.
T Consensus       329 ---~aDVVIsAT~s~~pv  343 (519)
T PLN00203        329 ---EADVVFTSTSSETPL  343 (519)
T ss_pred             ---cCCEEEEccCCCCCe
Confidence               579999988765544

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.64  E-value=0.0037  Score=40.56  Aligned_cols=33  Identities=21%  Similarity=0.259  Sum_probs=21.9

Q ss_pred             CCEEEEeCCCCchHHH--HHHHHHHcCCeEEEEEcC
Q 027991           31 GLTAIVTGATSGIGTE--TARVLALRGVHVVMGVRD   64 (216)
Q Consensus        31 ~k~~lItG~s~giG~~--~a~~l~~~g~~Vi~~~r~   64 (216)
                      .|++||+|+|+|+|++  ++..| ..|++.+-+...
T Consensus        39 pK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   39 PKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             -SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            3899999999999999  66666 567776666543

>PRK14851 hypothetical protein; Provisional

Probab=96.63  E-value=0.02  Score=52.85  Aligned_cols=84  Identities=11%  Similarity=0.190  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDA   86 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~   86 (216)
                      -.+++++|+|.|. ||+|..+++.|+..|. ++.++|..                   ..|.+...+.+.+..|..++..
T Consensus        39 ~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~  117 (679)
T PRK14851         39 ERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP  117 (679)
T ss_pred             HHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence            3467889999985 8999999999999997 78888632                   1234445666666677778888


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           87 MELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        87 ~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +...+++ +.+.++++       ++|++|.+.-
T Consensus       118 ~~~~i~~-~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        118 FPAGINA-DNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             EecCCCh-HHHHHHHh-------CCCEEEECCC
Confidence            8777764 44455554       5688875543

>PRK07411 hypothetical protein; Validated

Probab=96.63  E-value=0.02  Score=49.45  Aligned_cols=84  Identities=19%  Similarity=0.261  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDA   86 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~   86 (216)
                      ..++..+|+|.|+ ||+|..+++.|+..|. ++.++|..                   ..+.+.+.+.+++..|..++..
T Consensus        34 ~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~  112 (390)
T PRK07411         34 KRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL  112 (390)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            3467789999987 8999999999999997 78888643                   1334566777777777777877


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           87 MELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        87 ~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +...++.+ ...+++.       ..|++|.+..
T Consensus       113 ~~~~~~~~-~~~~~~~-------~~D~Vvd~~d  137 (390)
T PRK07411        113 YETRLSSE-NALDILA-------PYDVVVDGTD  137 (390)
T ss_pred             EecccCHH-hHHHHHh-------CCCEEEECCC
Confidence            77766653 2333332       4577766654

>PRK05442 malate dehydrogenase; Provisional

Probab=96.62  E-value=0.013  Score=49.37  Aligned_cols=117  Identities=15%  Similarity=0.078  Sum_probs=68.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCCc--chHHHHHHHHhhc-CC-CeEEEEEccCCCHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIA--AGKDVKETIVKEI-PS-AKVDAMELDLSSLASVRN   99 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~~--~~~~~~~~~~~~~-~~-~~~~~~~~Dv~~~~~~~~   99 (216)
                      .+++.|+|++|.+|..++..|+..|.       ++++.|.+++  +++-...++.... +. .++.+ ..  .+      
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~------   74 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DP------   74 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--Ch------
Confidence            45899999999999999999988773       6999998543  3433333333321 11 01111 10  11      


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                           .+....-|++|.+||...... .+   =.+.+..|+.    +++.+.+.+.+..   .+.+.+|++|.
T Consensus        75 -----y~~~~daDiVVitaG~~~k~g-~t---R~dll~~Na~----i~~~i~~~i~~~~---~~~~iiivvsN  131 (326)
T PRK05442         75 -----NVAFKDADVALLVGARPRGPG-ME---RKDLLEANGA----IFTAQGKALNEVA---ARDVKVLVVGN  131 (326)
T ss_pred             -----HHHhCCCCEEEEeCCCCCCCC-Cc---HHHHHHHHHH----HHHHHHHHHHHhC---CCCeEEEEeCC
Confidence                 122347899999999853221 12   2345555544    5555555555421   13567777775

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.62  E-value=0.0084  Score=44.13  Aligned_cols=41  Identities=20%  Similarity=0.237  Sum_probs=37.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ..+++||.++|.|.+.-.|..++..|.++|++|.+++++..
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            46799999999999999999999999999999999986654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.62  E-value=0.013  Score=48.59  Aligned_cols=31  Identities=29%  Similarity=0.411  Sum_probs=26.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRD   64 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~   64 (216)
                      +|+|.|+ ||+|..+++.|+..|. ++.++|..
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            3788877 8999999999999997 78888643

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.61  E-value=0.022  Score=49.20  Aligned_cols=81  Identities=23%  Similarity=0.356  Sum_probs=55.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEEE
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      +++.+|+|.|+ ||+|..+++.|+..|. ++.++|...                   .+.+.+.+.+.+..|..++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            57788999988 8999999999999997 788886431                   23455566666666666676666


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 027991           89 LDLSSLASVRNFASEYNIQHHQLNILINNA  118 (216)
Q Consensus        89 ~Dv~~~~~~~~~~~~~~~~~~~id~li~~A  118 (216)
                      .+++.. ...++++       ..|++|.+.
T Consensus       119 ~~i~~~-~~~~~~~-------~~D~Vvd~~  140 (392)
T PRK07878        119 FRLDPS-NAVELFS-------QYDLILDGT  140 (392)
T ss_pred             ccCChh-HHHHHHh-------cCCEEEECC
Confidence            666542 2333332       456666554

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.61  E-value=0.007  Score=42.59  Aligned_cols=71  Identities=20%  Similarity=0.235  Sum_probs=51.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccE
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNI  113 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~  113 (216)
                      ++|.|. +.+|..+++.|.+.+.+|++++++++..+..    ...    .+.++.+|.++++.++++-      ..+.|.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~----~~~----~~~~i~gd~~~~~~l~~a~------i~~a~~   65 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL----REE----GVEVIYGDATDPEVLERAG------IEKADA   65 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HHT----TSEEEES-TTSHHHHHHTT------GGCESE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH----Hhc----ccccccccchhhhHHhhcC------ccccCE
Confidence            467777 6899999999999777999999997664443    322    2678999999999887641      125677


Q ss_pred             EEECCc
Q 027991          114 LINNAG  119 (216)
Q Consensus       114 li~~Ag  119 (216)
                      +|....
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            776655

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.59  E-value=0.097  Score=43.55  Aligned_cols=40  Identities=23%  Similarity=0.234  Sum_probs=33.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVK   72 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~   72 (216)
                      +++.|+|+ |.+|..++..++..|. +|++.|++++.++...
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~   43 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKA   43 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHH
Confidence            57899998 9999999999999875 9999999887654433

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.59  E-value=0.15  Score=42.54  Aligned_cols=116  Identities=16%  Similarity=0.143  Sum_probs=72.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC---CCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++.|.|+ |.+|..+|..|+.+|.  ++++.|.++++++-....+....+   ..++.+..   .+.+++          
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~----------   66 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDC----------   66 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHh----------
Confidence            3678898 9999999999999884  799999998877666666665322   12333332   233332          


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                       ..-|++|.+||....+. ++.+ =.+.+..|    ..+.+...+.+.+.    .+.+.++++|.-
T Consensus        67 -~~aDivvitaG~~~kpg-~tr~-R~dll~~N----~~I~~~i~~~i~~~----~p~~i~ivvsNP  121 (307)
T cd05290          67 -ADADIIVITAGPSIDPG-NTDD-RLDLAQTN----AKIIREIMGNITKV----TKEAVIILITNP  121 (307)
T ss_pred             -CCCCEEEECCCCCCCCC-CCch-HHHHHHHH----HHHHHHHHHHHHHh----CCCeEEEEecCc
Confidence             36799999999853322 2210 12334444    34666667776654    245666666653

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.59  E-value=0.0074  Score=46.22  Aligned_cols=43  Identities=28%  Similarity=0.237  Sum_probs=36.6

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~   67 (216)
                      .....+.|+++.|.|. |.||.++|+.+...|.+|+..+|+...
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~   71 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKP   71 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCCh
Confidence            3445688999999987 999999999999999999999999764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.58  E-value=0.013  Score=49.02  Aligned_cols=74  Identities=20%  Similarity=0.387  Sum_probs=52.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +.+++++|.|+ |.+|..+++.|...|. +|++++|+.++.++..+++     +.  ..     .+.+++.+.+.     
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~--~~-----~~~~~~~~~l~-----  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG--NA-----VPLDELLELLN-----  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC--eE-----EeHHHHHHHHh-----
Confidence            67899999987 9999999999998774 7999999977665554443     22  11     12233333332     


Q ss_pred             cCCccEEEECCccCC
Q 027991          108 HHQLNILINNAGIMG  122 (216)
Q Consensus       108 ~~~id~li~~Ag~~~  122 (216)
                        ..|++|.+.+...
T Consensus       238 --~aDvVi~at~~~~  250 (311)
T cd05213         238 --EADVVISATGAPH  250 (311)
T ss_pred             --cCCEEEECCCCCc
Confidence              4699999988643

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.57  E-value=0.042  Score=45.79  Aligned_cols=118  Identities=14%  Similarity=0.162  Sum_probs=70.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCC-eEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++.|+|+ |++|.+++..|+.++.  ++++.+.+++.++-...++....+.. .-..+..| .+.+++           
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------
Confidence            36889999 9999999999988873  79999999776665555554432111 11112222 222222           


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      .+-|++|..||....+. ++-   .+.++.|..-.-.+.+.+.+.-        +.+.|+.+|.-.
T Consensus        68 ~~aDiVvitAG~prKpG-mtR---~DLl~~Na~I~~~i~~~i~~~~--------~d~ivlVvtNPv  121 (313)
T COG0039          68 KGADIVVITAGVPRKPG-MTR---LDLLEKNAKIVKDIAKAIAKYA--------PDAIVLVVTNPV  121 (313)
T ss_pred             cCCCEEEEeCCCCCCCC-CCH---HHHHHhhHHHHHHHHHHHHhhC--------CCeEEEEecCcH
Confidence            36899999999874333 232   3345666554444444443332        346666666543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.56  E-value=0.015  Score=46.06  Aligned_cols=42  Identities=26%  Similarity=0.403  Sum_probs=36.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~   74 (216)
                      ++.|+||+|.+|.++++.|++.|++|++.+|+.++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            488999999999999999999999999999988776655443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK04148 hypothetical protein; Provisional

Probab=96.54  E-value=0.0046  Score=45.03  Aligned_cols=56  Identities=18%  Similarity=0.098  Sum_probs=44.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA   95 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   95 (216)
                      ++++++++|.+  .|.++|+.|.+.|++|+.+|.+++..+.+.+        ..+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~--------~~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK--------LGLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hCCeEEECcCCCCC
Confidence            45789999986  8889999999999999999999876554432        23578889988754

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.54  E-value=0.11  Score=43.14  Aligned_cols=114  Identities=18%  Similarity=0.180  Sum_probs=69.9

Q ss_pred             EEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCC-CeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           35 IVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        35 lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      .|.|+ |++|..++-.++.+|  .+++++|++.++++....++....+. ........  .+.+++           ..-
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~l-----------~~a   67 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYADA-----------ADA   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHHh-----------CCC
Confidence            57786 789999999999999  57999999988877777777655322 11111111  222221           267


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      |++|.++|...... ++.   .+.+..|+    -+++.+.+.+.+.    .+.+.|+++|.-.
T Consensus        68 DiVIitag~p~~~~-~~R---~~l~~~n~----~i~~~~~~~i~~~----~p~~~viv~sNP~  118 (300)
T cd00300          68 DIVVITAGAPRKPG-ETR---LDLINRNA----PILRSVITNLKKY----GPDAIILVVSNPV  118 (300)
T ss_pred             CEEEEcCCCCCCCC-CCH---HHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEccChH
Confidence            99999999853221 222   23333343    3455555555543    2467788777643

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.54  E-value=0.017  Score=47.40  Aligned_cols=79  Identities=18%  Similarity=0.281  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++++|+|+++++|..+++.+...|++|+++.++.++.+.. .    +. +.+.   ..+..+.+....+.+ ... ..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~----~~-g~~~---~~~~~~~~~~~~~~~-~~~-~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-E----AL-GADI---AINYREEDFVEVVKA-ETG-GK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H----Hc-CCcE---EEecCchhHHHHHHH-HcC-CC
Confidence            478999999999999999999999999999998886654322 2    22 2211   123333333333322 221 13


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|++|+++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            6999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.53  E-value=0.012  Score=49.01  Aligned_cols=80  Identities=18%  Similarity=0.227  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+.+++|.|+++++|.++++.+...|++|+.+.++.++.+...+.    + +.. .++  |..+.+. .+.+.+.. . +
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~----~-g~~-~~~--~~~~~~~-~~~v~~~~-~-~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE----L-GFD-AAI--NYKTPDL-AEALKEAA-P-D  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh----c-CCc-eEE--ecCChhH-HHHHHHhc-c-C
Confidence            467999999999999999999999999999998876554433221    2 221 111  2223222 22222222 1 4


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++++++|.
T Consensus       214 ~~d~vi~~~g~  224 (329)
T cd05288         214 GIDVYFDNVGG  224 (329)
T ss_pred             CceEEEEcchH
Confidence            79999998773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.51  E-value=0.0067  Score=47.53  Aligned_cols=39  Identities=23%  Similarity=0.245  Sum_probs=35.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      -.++++||.|+|.|| |.+|...++.|.+.|++|.++++.
T Consensus         4 l~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          4 LMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            346789999999999 999999999999999999998765

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.51  E-value=0.041  Score=46.07  Aligned_cols=90  Identities=14%  Similarity=0.073  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH---H--HHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD---V--KETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~---~--~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ..+.||++.|.|- |.||..+++.|...|.+|+..+++.+....   .  ..++.+..+..++..+.+..++  +.+.++
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~--~T~~li  208 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTP--ETVGII  208 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCH--HHHHHh
Confidence            3578999999987 999999999999999999999876543211   0  1123333335667777777765  344455


Q ss_pred             HH-HHhhcCCccEEEECCcc
Q 027991          102 SE-YNIQHHQLNILINNAGI  120 (216)
Q Consensus       102 ~~-~~~~~~~id~li~~Ag~  120 (216)
                      ++ ..+.. +.+.++.|.|-
T Consensus       209 ~~~~l~~m-k~ga~lIN~aR  227 (312)
T PRK15469        209 NQQLLEQL-PDGAYLLNLAR  227 (312)
T ss_pred             HHHHHhcC-CCCcEEEECCC
Confidence            43 33333 33555555553

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.51  E-value=0.02  Score=47.26  Aligned_cols=80  Identities=18%  Similarity=0.226  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|.+++|++|+|..|.-..+.--..|++|+-+.-..++..-+.+++.-    .    ...|-..+ ++.+.+.+.  ...
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf----D----~~idyk~~-d~~~~L~~a--~P~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF----D----AGIDYKAE-DFAQALKEA--CPK  218 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC----c----eeeecCcc-cHHHHHHHH--CCC
Confidence            588999999999999988888778899999998888877665554421    1    12344444 333333332  225


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      +||+.+-|.|-
T Consensus       219 GIDvyfeNVGg  229 (340)
T COG2130         219 GIDVYFENVGG  229 (340)
T ss_pred             CeEEEEEcCCc
Confidence            89999999995

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.49  E-value=0.0063  Score=53.91  Aligned_cols=46  Identities=22%  Similarity=0.253  Sum_probs=38.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE   73 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~   73 (216)
                      ..+++++++|+|+ ||+|.+++..|.+.|++|++.+|+.++.+...+
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            3567899999996 799999999999999999999998766655443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.49  E-value=0.025  Score=47.70  Aligned_cols=90  Identities=14%  Similarity=0.126  Sum_probs=57.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHH---HHHHhhcCCCeEEEEEccCCCHHHHHHHHH-
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK---ETIVKEIPSAKVDAMELDLSSLASVRNFAS-  102 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~-  102 (216)
                      ..+.|+++.|.|. |.||.++|+.|...|.+|+..+++.+......   ..+.......++..+.+..+..  ...++. 
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~--t~~li~~  218 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE--SYHLFDK  218 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH--HHHHHhH
Confidence            4588999999987 88999999999999999999998864322111   1222233356777777777653  233333 


Q ss_pred             HHHhhcCCccEEEECCcc
Q 027991          103 EYNIQHHQLNILINNAGI  120 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~  120 (216)
                      +..... +.+.++.|+|-
T Consensus       219 ~~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        219 AMFDHV-KKGAILVNAAR  235 (330)
T ss_pred             HHHhcC-CCCcEEEEcCC
Confidence            333333 34556555553

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.48  E-value=0.029  Score=40.33  Aligned_cols=80  Identities=20%  Similarity=0.240  Sum_probs=54.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-cCCeEEE-EEcCCcc-----h-------------HHHHHHHHhhcCCCeEEEEEccCC
Q 027991           33 TAIVTGATSGIGTETARVLAL-RGVHVVM-GVRDIAA-----G-------------KDVKETIVKEIPSAKVDAMELDLS   92 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~-~g~~Vi~-~~r~~~~-----~-------------~~~~~~~~~~~~~~~~~~~~~Dv~   92 (216)
                      ++.|.|.+|-.|..+++.+.+ .+.+++. ++|+.+.     .             .+-.+++...   .+   +..|+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~---~D---VvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE---AD---VVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH----S---EEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc---CC---EEEEcC
Confidence            589999999999999999999 6677544 4565510     0             0111222221   11   567999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCcc
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      .++.+.+.++.+.+.  ++.+++-+.|+
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999999988776  78999999997

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.45  E-value=0.019  Score=44.43  Aligned_cols=39  Identities=21%  Similarity=0.076  Sum_probs=35.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      .+++||.++|.|-|.-+|..++..|.++|++|.+++.+.
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~   96 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDING   96 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCc
Confidence            479999999999999999999999999999999997543

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.45  E-value=0.076  Score=45.73  Aligned_cols=116  Identities=13%  Similarity=0.117  Sum_probs=71.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-e----EEE----EEcCCcchHHHHHHHHhhc-CCC-eEEEEEccCCCHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-H----VVM----GVRDIAAGKDVKETIVKEI-PSA-KVDAMELDLSSLASVRNF  100 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~----Vi~----~~r~~~~~~~~~~~~~~~~-~~~-~~~~~~~Dv~~~~~~~~~  100 (216)
                      -++.|+|++|.+|..++-.++.+|. .    |.+    ++++.++++-...++.... +-. ++. +..  .+.+++   
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y~~~---  118 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPYEVF---  118 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCHHHh---
Confidence            4799999999999999999998884 3    444    4888888777777776543 211 111 111  222222   


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                              ...|++|.+||....+. .+   =.+.+..|+.    +++...+.+.+.   ..+.+.||++|.
T Consensus       119 --------kdaDIVVitAG~prkpg-~t---R~dll~~N~~----I~k~i~~~I~~~---a~~~~iviVVsN  171 (387)
T TIGR01757       119 --------EDADWALLIGAKPRGPG-ME---RADLLDINGQ----IFADQGKALNAV---ASKNCKVLVVGN  171 (387)
T ss_pred             --------CCCCEEEECCCCCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHh---CCCCeEEEEcCC
Confidence                    36899999999853221 12   2345556654    444455554442   114567777775

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.44  E-value=0.036  Score=46.87  Aligned_cols=40  Identities=28%  Similarity=0.253  Sum_probs=36.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ..++.||++.|.|. |.||..+|+.|...|.+|+..+|+..
T Consensus       145 g~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        145 GYDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             ccCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            35789999999998 99999999999999999999988754

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.43  E-value=0.028  Score=46.54  Aligned_cols=77  Identities=23%  Similarity=0.331  Sum_probs=53.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEEEccCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAMELDLS   92 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   92 (216)
                      ++||.|+ ||+|-++++.|+..|. ++.++|..                   ..+++.+.+.+.+..|..++.....++.
T Consensus         1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            3788875 8999999999999997 78888632                   1234555666666667777777777777


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      +.+  .++       +.+.|++|.+..
T Consensus        80 ~~~--~~f-------~~~fdvVi~alD   97 (291)
T cd01488          80 DKD--EEF-------YRQFNIIICGLD   97 (291)
T ss_pred             chh--HHH-------hcCCCEEEECCC
Confidence            532  122       236788887543

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.41  E-value=0.027  Score=48.00  Aligned_cols=79  Identities=14%  Similarity=0.087  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~  107 (216)
                      .|.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+ +++     +...   ..|..+ .+.+.+.+.++.. 
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~-  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD---CVNPNDYDKPIQEVIVEITD-  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe---EEcccccchhHHHHHHHHhC-
Confidence            4779999975 9999999999999998 799998887765543 222     2221   123332 2334444444433 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.++|.
T Consensus       254 -~g~d~vid~~G~  265 (368)
T TIGR02818       254 -GGVDYSFECIGN  265 (368)
T ss_pred             -CCCCEEEECCCC
Confidence             379999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.40  E-value=0.015  Score=47.93  Aligned_cols=80  Identities=13%  Similarity=0.187  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++++|+|+++++|.++++.+...|++|+.++++.++.+.+.     .. +.. .++  |..... ..+.+.+... ..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----~~-g~~-~~~--~~~~~~-~~~~~~~~~~-~~  212 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-----AL-GAA-HVI--VTDEED-LVAEVLRITG-GK  212 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----Hc-CCC-EEE--ecCCcc-HHHHHHHHhC-CC
Confidence            4678999999999999999999999999999988865544331     11 221 122  222222 2222222211 12


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      .+|++++++|.
T Consensus       213 ~~d~vi~~~~~  223 (328)
T cd08268         213 GVDVVFDPVGG  223 (328)
T ss_pred             CceEEEECCch
Confidence            69999998873

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.39  E-value=0.0092  Score=44.93  Aligned_cols=43  Identities=26%  Similarity=0.328  Sum_probs=33.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~   68 (216)
                      ..+++||+++|.|.|.-+|..++..|.++|++|.++....+.+
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l   73 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL   73 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc
Confidence            4679999999999999999999999999999999987775443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.36  E-value=0.032  Score=42.01  Aligned_cols=41  Identities=24%  Similarity=0.253  Sum_probs=31.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~   67 (216)
                      ...+.||+++|.|- |.+|+.+|+.|...|++|++++.++-+
T Consensus        18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~   58 (162)
T PF00670_consen   18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIR   58 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHH
T ss_pred             ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHH
Confidence            46689999999998 999999999999999999999988644

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.35  E-value=0.055  Score=45.30  Aligned_cols=117  Identities=15%  Similarity=0.164  Sum_probs=67.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++.|+|++|.+|..++..|+.++.  ++++.|.++..  -....+....  ....+..+.-.+  +.       .+.+..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~--g~a~DL~~~~--~~~~i~~~~~~~--~~-------~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA--GVAADLSHIP--TAASVKGFSGEE--GL-------ENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc--EEEchhhcCC--cCceEEEecCCC--ch-------HHHcCC
Confidence            478999999999999999998884  79999987621  1111222211  111111101011  11       122347


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      -|++|.+||...... .+   =.+.+..|+.    +.+...+.+.+.    .+.+.||++|.-.
T Consensus        68 aDivvitaG~~~~~g-~~---R~dll~~N~~----I~~~i~~~i~~~----~p~~iiivvsNPv  119 (312)
T TIGR01772        68 ADVVVIPAGVPRKPG-MT---RDDLFNVNAG----IVKDLVAAVAES----CPKAMILVITNPV  119 (312)
T ss_pred             CCEEEEeCCCCCCCC-cc---HHHHHHHhHH----HHHHHHHHHHHh----CCCeEEEEecCch
Confidence            899999999853221 12   2345666655    555566665543    2567788888644

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.32  E-value=0.081  Score=45.12  Aligned_cols=78  Identities=15%  Similarity=0.122  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+.+++|.|+ +++|...++.+...|+ +|+++++++++.+.+ +++     +...   ..|..++ +..+.+.+...  
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~---~i~~~~~-~~~~~i~~~~~--  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GATA---TVNAGDP-NAVEQVRELTG--  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCce---EeCCCch-hHHHHHHHHhC--
Confidence            4678999985 8999999999999999 698888887665433 222     2211   1233332 22222333322  


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.++|.
T Consensus       258 ~g~d~vid~~G~  269 (371)
T cd08281         258 GGVDYAFEMAGS  269 (371)
T ss_pred             CCCCEEEECCCC
Confidence            369999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.32  E-value=0.014  Score=48.15  Aligned_cols=39  Identities=23%  Similarity=0.332  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      ..+++||.++|+|.+.-+|..++..|..+|++|.++.++
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            457999999999999999999999999999999998765

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.29  E-value=0.081  Score=44.23  Aligned_cols=117  Identities=17%  Similarity=0.107  Sum_probs=67.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++.|+|++|.+|..++-.|+.+|  .+++++|.+  +++-....+....+...+  ..+.-++  ++       .+.+..
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i--~~~~~~~--~~-------y~~~~d   68 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKV--TGYLGPE--EL-------KKALKG   68 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceE--EEecCCC--ch-------HHhcCC
Confidence            68899999999999999999988  379999988  333323333332111111  1110111  11       122237


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      .|++|.+||....+. .+   =.+.+..|..-.-.+.+.+.++        .+.+.||++|.-.
T Consensus        69 aDivvitaG~~~k~g-~t---R~dll~~N~~i~~~i~~~i~~~--------~p~a~vivvtNPv  120 (310)
T cd01337          69 ADVVVIPAGVPRKPG-MT---RDDLFNINAGIVRDLATAVAKA--------CPKALILIISNPV  120 (310)
T ss_pred             CCEEEEeCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHHh--------CCCeEEEEccCch
Confidence            899999999853222 12   2345666655444444444433        1467888888644

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=96.28  E-value=0.022  Score=49.64  Aligned_cols=82  Identities=20%  Similarity=0.170  Sum_probs=55.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++.++|++|+ ||||-++-|-|+..|. +|-+++-..=.+.++         +.++.+-+=|+..+....  ..++..+
T Consensus        10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNL---------NRQFLFrkkhVgqsKA~v--A~~~v~~   77 (603)
T KOG2013|consen   10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNL---------NRQFLFRKKHVGQSKATV--AAKAVKQ   77 (603)
T ss_pred             hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccch---------hhhheeehhhcCchHHHH--HHHHHHH
Confidence            35778999998 9999999999999998 688887665443332         344556666666655432  2233333


Q ss_pred             c-CCccEEEECCccCC
Q 027991          108 H-HQLNILINNAGIMG  122 (216)
Q Consensus       108 ~-~~id~li~~Ag~~~  122 (216)
                      | .+++++-..|.+..
T Consensus        78 Fnpn~~l~~yhanI~e   93 (603)
T KOG2013|consen   78 FNPNIKLVPYHANIKE   93 (603)
T ss_pred             hCCCCceEeccccccC
Confidence            3 36777777776653

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.28  E-value=0.043  Score=45.67  Aligned_cols=65  Identities=11%  Similarity=0.130  Sum_probs=49.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC-CHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASE  103 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~  103 (216)
                      .|+++.|+|+.| ||.--++.--+-|.+|++++++..+-+++.+.|.++     ..   .|.+ |++.++++.+.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd-----~f---v~~~~d~d~~~~~~~~  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD-----VF---VDSTEDPDIMKAIMKT  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc-----ee---EEecCCHHHHHHHHHh
Confidence            799999999966 998888877788999999999987777777666332     22   3666 66666666553

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.27  E-value=0.017  Score=55.45  Aligned_cols=77  Identities=22%  Similarity=0.327  Sum_probs=58.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-Ce-------------EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRG-VH-------------VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA   95 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g-~~-------------Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   95 (216)
                      +.|+++|.|+ |.+|...++.|++.. +.             |.+.+++.+.++.+.+    .++  ++..++.|++|.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~----~~~--~~~~v~lDv~D~e  640 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVE----GIE--NAEAVQLDVSDSE  640 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHH----hcC--CCceEEeecCCHH
Confidence            4668999997 999999999998764 23             7888888766555443    222  4568999999998


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCcc
Q 027991           96 SVRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      ++.++++       ++|++|++...
T Consensus       641 ~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhc-------CCCEEEECCCc
Confidence            8877765       58999988764

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.27  E-value=0.025  Score=47.51  Aligned_cols=90  Identities=16%  Similarity=0.184  Sum_probs=56.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH-H
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY-N  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~-~  105 (216)
                      ..+.||++.|.|- |.||.++|+.+...|.+|+..++...........+....+..++..+.+.++.+  .+.++++- .
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~--T~~li~~~~~  220 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEH--TRHLIGAREL  220 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChH--HhcCcCHHHH
Confidence            4689999999998 999999999999999999988875321100011122222245677777777764  33344431 1


Q ss_pred             hhcCCccEEEECCcc
Q 027991          106 IQHHQLNILINNAGI  120 (216)
Q Consensus       106 ~~~~~id~li~~Ag~  120 (216)
                      +.. +.+.++.|.|-
T Consensus       221 ~~m-k~ga~lIN~aR  234 (317)
T PRK06487        221 ALM-KPGALLINTAR  234 (317)
T ss_pred             hcC-CCCeEEEECCC
Confidence            222 34555555553

>PLN02740 Alcohol dehydrogenase-like

Probab=96.25  E-value=0.031  Score=47.93  Aligned_cols=79  Identities=14%  Similarity=0.100  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH-HHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~  107 (216)
                      .|.+++|.|+ |++|...++.+...|+ +|++++++.++.+.+. +    + +... ++  |..+. +.+.+.+.++.. 
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~----~-Ga~~-~i--~~~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-E----M-GITD-FI--NPKDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-H----c-CCcE-EE--ecccccchHHHHHHHHhC-
Confidence            4778999985 9999999999999999 6999988877655442 1    2 2221 22  33332 233344444332 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.++|.
T Consensus       267 -~g~dvvid~~G~  278 (381)
T PLN02740        267 -GGVDYSFECAGN  278 (381)
T ss_pred             -CCCCEEEECCCC
Confidence             269999999984

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.22  E-value=0.11  Score=54.51  Aligned_cols=171  Identities=13%  Similarity=0.084  Sum_probs=98.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.++.++|++..++++.+++++|.++|++|+++..... .......+     +..+..+...-.|++++..+++.+...
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPL-----ASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccccc-----ccccccccccccchHHHHHHHHhhhcc
Confidence            345788999988899999999999999999887742211 10000000     122333455555668888888888777


Q ss_pred             cCCccEEEECCccCCCCCC-CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          108 HHQLNILINNAGIMGTPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      .+.++.+||.........+ .+...+...-...+...|.+.|.+.+.+...     +.+.++.++...|-.|..+.....
T Consensus      1826 ~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~-----~~~~~~~vsr~~G~~g~~~~~~~~ 1900 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATN-----ARASFVTVSRIDGGFGYSNGDADS 1900 (2582)
T ss_pred             ccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccC-----CCeEEEEEEecCCccccCCccccc
Confidence            8899999997775422111 0111111112234555677777766655432     456888888877766643322111


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ... .... ..-.+++.+|.+++..
T Consensus      1901 ~~~-~~~~-~~~~a~l~Gl~Ktl~~ 1923 (2582)
T TIGR02813      1901 GTQ-QVKA-ELNQAALAGLTKTLNH 1923 (2582)
T ss_pred             ccc-cccc-chhhhhHHHHHHhHHH
Confidence            000 0000 2235667777776653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.21  E-value=0.075  Score=43.63  Aligned_cols=89  Identities=12%  Similarity=0.152  Sum_probs=54.6

Q ss_pred             CCCCEEEEeCCCCchHHHH--HHHHHHcCCeEEEEE--cCC-cc--------hHHHHHHHHhhcCCCeEEEEEccCCCHH
Q 027991           29 GSGLTAIVTGATSGIGTET--ARVLALRGVHVVMGV--RDI-AA--------GKDVKETIVKEIPSAKVDAMELDLSSLA   95 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~--a~~l~~~g~~Vi~~~--r~~-~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   95 (216)
                      ...|+|||+|+|+|.|++.  +-.|- -|++-+-+.  |.. ++        ......++..+. +....-+..|.=..+
T Consensus        39 ngPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k-GlyAksingDaFS~e  116 (398)
T COG3007          39 NGPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK-GLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc-CceeeecccchhhHH
Confidence            3568999999999988763  33333 345433332  111 10        011222222221 444555667877778


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCc
Q 027991           96 SVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      .-++.++.++..+|.+|.+|..-+
T Consensus       117 ~k~kvIe~Ik~~~g~vDlvvYSlA  140 (398)
T COG3007         117 MKQKVIEAIKQDFGKVDLVVYSLA  140 (398)
T ss_pred             HHHHHHHHHHHhhccccEEEEecc
Confidence            888889999999999999987643

>PLN02928 oxidoreductase family protein

Probab=96.21  E-value=0.039  Score=46.93  Aligned_cols=38  Identities=29%  Similarity=0.276  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+.||++.|.|- |.||..+|+.+...|.+|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4688999999998 9999999999999999999998873

>PRK14852 hypothetical protein; Provisional

Probab=96.21  E-value=0.041  Score=52.31  Aligned_cols=83  Identities=13%  Similarity=0.211  Sum_probs=59.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++.+|+|.|. ||+|..+++.|+..|. ++.++|..                   ..|++.+.+.+.+..|..++..+
T Consensus       329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            467889999985 8999999999999996 78888632                   13445566666666677777777


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ...+++ +.+.++++       ++|++|.+.-
T Consensus       408 ~~~I~~-en~~~fl~-------~~DiVVDa~D  431 (989)
T PRK14852        408 PEGVAA-ETIDAFLK-------DVDLLVDGID  431 (989)
T ss_pred             ecCCCH-HHHHHHhh-------CCCEEEECCC
Confidence            776644 44555544       5688886543

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.20  E-value=0.027  Score=48.81  Aligned_cols=87  Identities=7%  Similarity=0.029  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEEcCCcchHHHHHHHHhhc--CCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .|.+++|.||+|++|...++.+...|.   +|++++++.++.+.+.+.+....  .+...  ...|..+.+++.+.+.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~--~~i~~~~~~~~~~~v~~~  252 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIEL--LYVNPATIDDLHATLMEL  252 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceE--EEECCCccccHHHHHHHH
Confidence            357899999999999999888777653   79999988777654433211000  01111  112333322333333333


Q ss_pred             HhhcCCccEEEECCc
Q 027991          105 NIQHHQLNILINNAG  119 (216)
Q Consensus       105 ~~~~~~id~li~~Ag  119 (216)
                      .. ..++|++|.++|
T Consensus       253 t~-g~g~D~vid~~g  266 (410)
T cd08238         253 TG-GQGFDDVFVFVP  266 (410)
T ss_pred             hC-CCCCCEEEEcCC
Confidence            22 235888888776

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.17  E-value=0.061  Score=47.16  Aligned_cols=38  Identities=34%  Similarity=0.524  Sum_probs=33.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~   70 (216)
                      ++.|+||.|++|.++++.|.+.|++|++++|+.+...+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~   39 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE   39 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence            58999999999999999999999999999998765433

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.16  E-value=0.067  Score=40.23  Aligned_cols=88  Identities=18%  Similarity=0.147  Sum_probs=56.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC-----CCeEEEEEccCCCHHHHHHHHHH--H
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-----SAKVDAMELDLSSLASVRNFASE--Y  104 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~--~  104 (216)
                      +++.+.|- |-.|..+++.|+++|++|.+.+|+.++.++..++-.....     -.+..++-.-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            45778877 8999999999999999999999998776665432100000     01234555667888888888887  6


Q ss_pred             HhhcCCccEEEECCcc
Q 027991          105 NIQHHQLNILINNAGI  120 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~  120 (216)
                      .....+=+++|.....
T Consensus        81 ~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   81 LAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             GGGS-TTEEEEE-SS-
T ss_pred             hhccccceEEEecCCc
Confidence            5555444566655544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.14  E-value=0.026  Score=49.42  Aligned_cols=77  Identities=17%  Similarity=0.200  Sum_probs=55.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ..++++|.|+ |.+|..+++.|.++|++|++++++++..+...+    +.  ....++..|.++.+.++++-      ..
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~----~~--~~~~~i~gd~~~~~~L~~~~------~~  296 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE----EL--PNTLVLHGDGTDQELLEEEG------ID  296 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----HC--CCCeEEECCCCCHHHHHhcC------Cc
Confidence            4678999999 999999999999999999999998765544333    21  23567788888877665431      12


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ..|.+|...+
T Consensus       297 ~a~~vi~~~~  306 (453)
T PRK09496        297 EADAFIALTN  306 (453)
T ss_pred             cCCEEEECCC
Confidence            4566665433

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.13  E-value=0.038  Score=45.90  Aligned_cols=78  Identities=17%  Similarity=0.297  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+..++|.|+++++|.++++.....|++|+.+.++.++.+.. .    .+ +.+ .++  |..+ ....+.+.....  +
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~----~~-g~~-~v~--~~~~-~~~~~~~~~~~~--~  206 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-K----SL-GCD-RPI--NYKT-EDLGEVLKKEYP--K  206 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-H----Hc-CCc-eEE--eCCC-ccHHHHHHHhcC--C
Confidence            567899999999999999999999999999988876554332 2    12 221 122  2222 223333333222  4


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|+++++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            6899998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.11  E-value=0.029  Score=47.77  Aligned_cols=79  Identities=11%  Similarity=0.074  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH-HHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~  107 (216)
                      .|.++||.|+ +++|...++.+...|+ +|+.++++.++.+.+ .++     +... +  .|..+. +++.+.+.++.. 
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~-~--i~~~~~~~~~~~~v~~~~~-  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD-C--VNPKDHDKPIQQVLVEMTD-  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE-E--EcccccchHHHHHHHHHhC-
Confidence            4779999975 9999999999999999 699999987765533 222     2221 1  233332 245555554433 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.+.|.
T Consensus       255 -~g~d~vid~~g~  266 (368)
T cd08300         255 -GGVDYTFECIGN  266 (368)
T ss_pred             -CCCcEEEECCCC
Confidence             379999998874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.09  E-value=0.04  Score=46.13  Aligned_cols=90  Identities=13%  Similarity=0.114  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH--HHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .++.||++.|.|- |.||.++|+.+...|.+|+..+|.....+.  ....+....+..++..+.+.++++  .+.++++-
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~--T~~li~~~  217 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK--TKNLIAYK  217 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch--hhcccCHH
Confidence            5789999999988 999999999999999999999875422110  011222223346777888887764  33344431


Q ss_pred             -HhhcCCccEEEECCcc
Q 027991          105 -NIQHHQLNILINNAGI  120 (216)
Q Consensus       105 -~~~~~~id~li~~Ag~  120 (216)
                       .+.+ +.+.++.|.|-
T Consensus       218 ~~~~M-k~~a~lIN~aR  233 (311)
T PRK08410        218 ELKLL-KDGAILINVGR  233 (311)
T ss_pred             HHHhC-CCCeEEEECCC
Confidence             1222 34555555553

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.08  E-value=0.23  Score=41.47  Aligned_cols=113  Identities=18%  Similarity=0.200  Sum_probs=66.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCC-CeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++.|.|+ |.+|..++..|+.+|  .+|++++++.++++.....+....+- .......   .+.++           ..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~-----------l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD-----------CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH-----------hC
Confidence            4789998 899999999999999  58999999987765433334322110 1111111   22221           23


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      ..|++|.++|...... .+   ..+.+..|+.    +.+.+.+.+.+.    .+.|.|++++.
T Consensus        67 ~aDiViita~~~~~~~-~~---r~dl~~~n~~----i~~~~~~~l~~~----~~~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQKPG-ET---RLDLLKRNVA----IFKEIIPQILKY----APDAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHH----CCCeEEEEecC
Confidence            6899999999853221 12   2334444443    444444444432    14577777765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.07  E-value=0.027  Score=46.73  Aligned_cols=42  Identities=31%  Similarity=0.394  Sum_probs=36.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      .+++++|.|+++++|..+++.....|++|+.+.++.++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999999999999999998887664433

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.05  E-value=0.0064  Score=42.25  Aligned_cols=38  Identities=26%  Similarity=0.399  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ++++||++||+|| |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5689999999999 9999999999999999999998885

>PLN03139 formate dehydrogenase; Provisional

Probab=96.02  E-value=0.09  Score=45.30  Aligned_cols=39  Identities=23%  Similarity=0.116  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..++.||++.|.|. |.||..+++.|...|.+|+..+++.
T Consensus       194 ~~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        194 AYDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CcCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            35799999999996 8999999999999999999988764

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.02  E-value=0.02  Score=47.44  Aligned_cols=44  Identities=23%  Similarity=0.187  Sum_probs=39.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~   69 (216)
                      ..+++||.+.|.|.++-+|..++..|.++|++|.++.+.....+
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            56799999999999999999999999999999999987765433

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.00  E-value=0.037  Score=36.98  Aligned_cols=36  Identities=36%  Similarity=0.446  Sum_probs=31.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEc
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVR   63 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r   63 (216)
                      .++++++++|.|. |+.|..++..+.+. +.+|.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578899999999 99999999999999 467888766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.00  E-value=0.03  Score=46.90  Aligned_cols=78  Identities=15%  Similarity=0.126  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|+|+ |++|..+++.+...|++ |++++++.++.+.+ .++     +...   ..|..+++ .+++ .++.. .
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~~-~~~~-~~~~~-~  229 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GADF---VINSGQDD-VQEI-RELTS-G  229 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EEcCCcch-HHHH-HHHhC-C
Confidence            4789999976 89999999999999998 99988887664433 222     2211   12333333 3222 22211 1


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.+.|.
T Consensus       230 ~~~d~vid~~g~  241 (339)
T cd08239         230 AGADVAIECSGN  241 (339)
T ss_pred             CCCCEEEECCCC
Confidence            369999998884

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.00  E-value=0.05  Score=43.35  Aligned_cols=37  Identities=22%  Similarity=0.322  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEEcC
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRD   64 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~---~Vi~~~r~   64 (216)
                      .++++++++|.|+ |+.|..+++.|...|.   +|++++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4578899999999 9999999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.99  E-value=0.054  Score=44.53  Aligned_cols=40  Identities=23%  Similarity=0.331  Sum_probs=35.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~   69 (216)
                      .|.+++|.|+++++|.++++.....|++|+.+.++.++.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  181 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA  181 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4779999999999999999999999999999888865533

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=95.97  E-value=0.059  Score=44.50  Aligned_cols=62  Identities=19%  Similarity=0.250  Sum_probs=45.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+.+.+|||.|. +|+|.++++.|+..|. +|.++|...                   .+++...+.+++..|..++...
T Consensus        16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            466788999987 8999999999999997 688887442                   2344555666666666566555


Q ss_pred             Ecc
Q 027991           88 ELD   90 (216)
Q Consensus        88 ~~D   90 (216)
                      ..+
T Consensus        95 ~~~   97 (286)
T cd01491          95 TGP   97 (286)
T ss_pred             ecc
Confidence            544

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.94  E-value=0.068  Score=46.02  Aligned_cols=37  Identities=24%  Similarity=0.265  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIA   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~   66 (216)
                      ..+++.|.||+|.+|.++.+.|.++ +.+|....++..
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~s   74 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRK   74 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhh
Confidence            3458999999999999999999999 568888877543

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.94  E-value=0.03  Score=46.33  Aligned_cols=80  Identities=18%  Similarity=0.180  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+++|.|+++++|.++++.....|++|+++.++.++.+..    .. . +.. .++  |-.+. +..+.+.+.... .
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~----~~-~-g~~-~~~--~~~~~-~~~~~i~~~~~~-~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL----RA-L-GIG-PVV--STEQP-GWQDKVREAAGG-A  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH----Hh-c-CCC-EEE--cCCCc-hHHHHHHHHhCC-C
Confidence            478999999999999999999999999999988776653333    22 1 221 122  22222 222333333221 2


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|+++.+.|.
T Consensus       208 ~~d~v~d~~g~  218 (324)
T cd08292         208 PISVALDSVGG  218 (324)
T ss_pred             CCcEEEECCCC
Confidence            69999998874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK07877 hypothetical protein; Provisional

Probab=95.91  E-value=0.062  Score=49.89  Aligned_cols=82  Identities=21%  Similarity=0.265  Sum_probs=60.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcC------------------CcchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRD------------------IAAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~------------------~~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++|+|.|. | +|..++..|+..|.  +++++|..                  ..|.+.+.+.+....|..++..+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999999 4 99999999999993  88888643                  13345566666777777788888


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ...++ ++.+.++++       +.|++|.+.-
T Consensus       182 ~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        182 TDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             eccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            87777 455655554       4688887665

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=95.91  E-value=0.19  Score=42.66  Aligned_cols=75  Identities=21%  Similarity=0.278  Sum_probs=47.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+++|.| ++++|...++.+...|++|+++.++.++.+...+.    + +....   .|-.+.+.+.+    .   .+
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~----~-Ga~~~---i~~~~~~~~~~----~---~~  243 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEH----L-GADDY---LVSSDAAEMQE----A---AD  243 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh----c-CCcEE---ecCCChHHHHH----h---cC
Confidence            577899995 59999999999999999988888776544333222    2 22211   12233222222    1   13


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.+.|.
T Consensus       244 ~~D~vid~~g~  254 (357)
T PLN02514        244 SLDYIIDTVPV  254 (357)
T ss_pred             CCcEEEECCCc
Confidence            68999999874

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.90  E-value=0.038  Score=45.67  Aligned_cols=80  Identities=20%  Similarity=0.213  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+..++|+|+++++|..+++.+...|.+|+.+.++.++.+.. ++    . +.. .+  .|..+.+..+++. +.. ...
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~----~-g~~-~~--~~~~~~~~~~~~~-~~~-~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA----L-GAD-VA--VDYTRPDWPDQVR-EAL-GGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH----c-CCC-EE--EecCCccHHHHHH-HHc-CCC
Confidence            467899999999999999999999999999998886654432 22    2 221 11  2333333333322 221 113


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|+++++.|.
T Consensus       211 ~~d~vl~~~g~  221 (324)
T cd08244         211 GVTVVLDGVGG  221 (324)
T ss_pred             CceEEEECCCh
Confidence            59999998773

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN02494 adenosylhomocysteinase

Probab=95.90  E-value=0.068  Score=47.04  Aligned_cols=40  Identities=20%  Similarity=0.310  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~   67 (216)
                      ..+.||+++|.|. |.||..+++.+...|++|+++++++.+
T Consensus       250 i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        250 VMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             CccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            4478999999998 699999999999999999999888654

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.89  E-value=0.27  Score=40.80  Aligned_cols=115  Identities=19%  Similarity=0.230  Sum_probs=63.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           34 AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +.|+|+ |.+|..++..++.+|. +|++.|++++.++....++.....  ..... +.. -+|.++    +       ..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~-t~d~~~----l-------~d   66 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTG-TNDYED----I-------AG   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEE-cCCHHH----h-------CC
Confidence            358898 8899999999998876 999999997654322222222110  11111 111 112222    1       26


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      -|++|.++|...... .+.   .+.+..|    +-+.+.+.+.+.+.    .+.+.+|++|...
T Consensus        67 ADiVIit~g~p~~~~-~~r---~e~~~~n----~~i~~~i~~~i~~~----~p~~~iIv~sNP~  118 (300)
T cd01339          67 SDVVVITAGIPRKPG-MSR---DDLLGTN----AKIVKEVAENIKKY----APNAIVIVVTNPL  118 (300)
T ss_pred             CCEEEEecCCCCCcC-CCH---HHHHHHH----HHHHHHHHHHHHHH----CCCeEEEEecCcH
Confidence            799999999753222 121   1233334    34555555555543    1355667776543

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.89  E-value=0.066  Score=47.42  Aligned_cols=76  Identities=14%  Similarity=0.132  Sum_probs=50.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+++++++|.|+ |++|.++|+.|.++|++|.+++++... .....+.+.+.  +  +.+...+-..      .      
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~------~------   75 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT------L------   75 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc------c------
Confidence            357889999997 889999999999999999999866432 22333334332  2  3333322111      0      


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                       ....|.+|...|+.
T Consensus        76 -~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         76 -PEDTDLVVTSPGWR   89 (480)
T ss_pred             -cCCCCEEEECCCcC
Confidence             12579999999974

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.87  E-value=0.029  Score=46.14  Aligned_cols=40  Identities=20%  Similarity=0.218  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||.++|.|.|.-+|..++..|..+|++|.++....
T Consensus       152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t  191 (285)
T PRK14191        152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT  191 (285)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence            4678999999999999999999999999999999885443

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=95.83  E-value=0.093  Score=44.60  Aligned_cols=104  Identities=22%  Similarity=0.216  Sum_probs=63.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +.+++|+|+ |-||+..+..+...|+ +|+++++++++++.+.+..     +...  + .+..++ .....+.++  ..|
T Consensus       169 ~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~-----g~~~--~-~~~~~~-~~~~~~~~~--t~g  236 (350)
T COG1063         169 GGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG-----GADV--V-VNPSED-DAGAEILEL--TGG  236 (350)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC-----CCeE--e-ecCccc-cHHHHHHHH--hCC
Confidence            337899987 9999999999999996 6888889888776554422     2111  1 122121 111112121  122


Q ss_pred             -CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          110 -QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       110 -~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                       ++|++|-++|...                       ..+.++...+       ++|+|++++-....
T Consensus       237 ~g~D~vie~~G~~~-----------------------~~~~ai~~~r-------~gG~v~~vGv~~~~  274 (350)
T COG1063         237 RGADVVIEAVGSPP-----------------------ALDQALEALR-------PGGTVVVVGVYGGE  274 (350)
T ss_pred             CCCCEEEECCCCHH-----------------------HHHHHHHHhc-------CCCEEEEEeccCCc
Confidence             6999999999311                       3334444444       57899988865444

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.80  E-value=0.085  Score=45.23  Aligned_cols=37  Identities=24%  Similarity=0.293  Sum_probs=31.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~   67 (216)
                      .|.+++|.|+ |++|...++.....|++|++++++.++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            5788999876 899999999999999999998877544

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.78  E-value=0.026  Score=43.35  Aligned_cols=44  Identities=25%  Similarity=0.293  Sum_probs=36.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHh
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK   77 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~   77 (216)
                      ++.|.|+ |-+|..+|..++..|++|.+.+++.+.++...+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678888 9999999999999999999999998887776666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.77  E-value=0.054  Score=45.39  Aligned_cols=90  Identities=19%  Similarity=0.197  Sum_probs=56.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch-HHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH-H
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE-Y  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~-~  104 (216)
                      .++.||++.|.|- |.||.++++.+...|.+|+..++..... ......+....+..++..+.+.++.+  .+.++++ .
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~--T~~li~~~~  219 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTET--TQNLINAET  219 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChH--HhcccCHHH
Confidence            4689999999998 9999999999999999999887653211 00011122222345777778877764  3334433 1


Q ss_pred             HhhcCCccEEEECCcc
Q 027991          105 NIQHHQLNILINNAGI  120 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~  120 (216)
                      .+.. +.+.++.|.|-
T Consensus       220 l~~m-k~ga~lIN~aR  234 (314)
T PRK06932        220 LALM-KPTAFLINTGR  234 (314)
T ss_pred             HHhC-CCCeEEEECCC
Confidence            1222 34555555553

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.77  E-value=0.042  Score=45.37  Aligned_cols=80  Identities=18%  Similarity=0.194  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+.+++|.|+++++|.++++.+...|++|+++.++.++.+.. .+    . +.+ .+  .|..+..... .+.+.. ...
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----~-g~~-~~--~~~~~~~~~~-~~~~~~-~~~  206 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KA----L-GAD-EV--IDSSPEDLAQ-RVKEAT-GGA  206 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hh----c-CCC-EE--ecccchhHHH-HHHHHh-cCC
Confidence            567999999999999999999999999999988887654333 21    1 221 11  1222322222 222221 123


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|+++.+.|.
T Consensus       207 ~~d~vl~~~g~  217 (323)
T cd05282         207 GARLALDAVGG  217 (323)
T ss_pred             CceEEEECCCC
Confidence            68999998773

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.76  E-value=0.082  Score=45.37  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=35.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~   70 (216)
                      .+.+++|+|+++++|.+++......|++++++.++.++.+.
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~  233 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEY  233 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            46799999999999999999999999998888877665443

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.76  E-value=0.043  Score=46.46  Aligned_cols=74  Identities=28%  Similarity=0.367  Sum_probs=47.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC---CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .|++++|+|+ |++|...++.+...|++|++++++   .++.+     +..++ +..  .  .|..++ ++.+ .    .
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-----~~~~~-Ga~--~--v~~~~~-~~~~-~----~  234 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-----IVEEL-GAT--Y--VNSSKT-PVAE-V----K  234 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-----HHHHc-CCE--E--ecCCcc-chhh-h----h
Confidence            5789999985 999999999998999999999984   33322     22222 332  2  233332 2222 1    1


Q ss_pred             hcCCccEEEECCcc
Q 027991          107 QHHQLNILINNAGI  120 (216)
Q Consensus       107 ~~~~id~li~~Ag~  120 (216)
                      ..+++|++|.++|.
T Consensus       235 ~~~~~d~vid~~g~  248 (355)
T cd08230         235 LVGEFDLIIEATGV  248 (355)
T ss_pred             hcCCCCEEEECcCC
Confidence            23579999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.75  E-value=0.064  Score=45.62  Aligned_cols=79  Identities=13%  Similarity=0.151  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH-HHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~  107 (216)
                      .|.+++|.|+ +++|...++.+...|+ +|++++++.++.+.+ +    ++ +... +  .|..+. +.+.+.+.++.. 
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~----~~-Ga~~-~--i~~~~~~~~~~~~v~~~~~-  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-K----KF-GVTE-F--VNPKDHDKPVQEVIAEMTG-  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H----Hc-CCce-E--EcccccchhHHHHHHHHhC-
Confidence            4778999985 9999999999999998 799998887654433 2    22 2211 1  133321 344444544433 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.+.|.
T Consensus       256 -~~~d~vid~~G~  267 (369)
T cd08301         256 -GGVDYSFECTGN  267 (369)
T ss_pred             -CCCCEEEECCCC
Confidence             269999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK07574 formate dehydrogenase; Provisional

Probab=95.75  E-value=0.1  Score=45.03  Aligned_cols=73  Identities=18%  Similarity=0.148  Sum_probs=49.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH-------HHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV-------KETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      .++.||++.|.|. |.||..+++.|...|.+|+..+|+....+..       ...+.+.....++..+.+.++.  +.+.
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~--~T~~  264 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHP--ETEH  264 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCH--HHHH
Confidence            4689999999988 8899999999999999999999875221100       0112222234566666666665  3444


Q ss_pred             HHH
Q 027991          100 FAS  102 (216)
Q Consensus       100 ~~~  102 (216)
                      +++
T Consensus       265 li~  267 (385)
T PRK07574        265 LFD  267 (385)
T ss_pred             HhC
Confidence            554

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.74  E-value=0.027  Score=50.91  Aligned_cols=73  Identities=12%  Similarity=0.085  Sum_probs=53.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ..++|.|. |.+|..+++.|.++|++|+++++++++.++..+        .....+.+|.+|++.++++--      .+.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~--------~g~~~i~GD~~~~~~L~~a~i------~~a  482 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE--------RGIRAVLGNAANEEIMQLAHL------DCA  482 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CCCeEEEcCCCCHHHHHhcCc------ccc
Confidence            45777776 899999999999999999999999776554432        246789999999888765311      145


Q ss_pred             cEEEECCc
Q 027991          112 NILINNAG  119 (216)
Q Consensus       112 d~li~~Ag  119 (216)
                      |.++...+
T Consensus       483 ~~viv~~~  490 (558)
T PRK10669        483 RWLLLTIP  490 (558)
T ss_pred             CEEEEEcC
Confidence            66655433

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.73  E-value=0.098  Score=45.87  Aligned_cols=76  Identities=18%  Similarity=0.152  Sum_probs=50.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +.+|+++|+|+ +++|.++++.|+++|++|.+.+......  ..+++...  ...+.+...+..  +.   .+       
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~--~~gi~~~~g~~~--~~---~~-------   65 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKM--FDGLVFYTGRLK--DA---LD-------   65 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhc--cCCcEEEeCCCC--HH---HH-------
Confidence            56899999998 4999999999999999999998765431  12233321  112333332211  11   11       


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                      ...|.+|.+.|+.
T Consensus        66 ~~~d~vv~spgi~   78 (445)
T PRK04308         66 NGFDILALSPGIS   78 (445)
T ss_pred             hCCCEEEECCCCC
Confidence            2579999999985

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.72  E-value=0.045  Score=44.83  Aligned_cols=40  Identities=23%  Similarity=0.350  Sum_probs=35.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~   69 (216)
                      .+..++|+|+++++|..+++.+...|++|+.++++.++.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA  178 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence            4789999999999999999999999999999988865543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.72  E-value=0.17  Score=44.44  Aligned_cols=103  Identities=11%  Similarity=0.068  Sum_probs=62.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHH---cC----CeEEEEEc--CCcchHHHHHHHHhhc-CCCe-EEEEEccCCCHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLAL---RG----VHVVMGVR--DIAAGKDVKETIVKEI-PSAK-VDAMELDLSSLASVRNF  100 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~---~g----~~Vi~~~r--~~~~~~~~~~~~~~~~-~~~~-~~~~~~Dv~~~~~~~~~  100 (216)
                      -+|+||||+|-||+++.-.+++   .|    ..+++++.  +.+.++-..-++.... |-.+ +.+. .  .+.++    
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~~ea----  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DLDVA----  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CCHHH----
Confidence            4699999999999999999987   23    34677787  5666766666666543 2111 2222 1  12222    


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 027991          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKK  156 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  156 (216)
                             +...|++|..+|...... ++   -.+.++.|+.    +++...+.+.+
T Consensus       197 -------~~daDvvIitag~prk~G-~~---R~DLL~~N~~----Ifk~~g~~I~~  237 (452)
T cd05295         197 -------FKDAHVIVLLDDFLIKEG-ED---LEGCIRSRVA----ICQLYGPLIEK  237 (452)
T ss_pred             -------hCCCCEEEECCCCCCCcC-CC---HHHHHHHHHH----HHHHHHHHHHH
Confidence                   237899999999853221 22   3445666654    44444444444

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.70  E-value=0.039  Score=45.41  Aligned_cols=40  Identities=38%  Similarity=0.482  Sum_probs=36.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||.++|+|-|.-+|..++..|..+|++|.++.+..
T Consensus       154 ~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T  193 (285)
T PRK10792        154 GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT  193 (285)
T ss_pred             CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC
Confidence            4678999999999999999999999999999999987654

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.69  E-value=0.036  Score=45.67  Aligned_cols=40  Identities=28%  Similarity=0.355  Sum_probs=35.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||.++|.|.|.-+|..++..|.++|++|.++....
T Consensus       153 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t  192 (285)
T PRK14189        153 GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT  192 (285)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence            5678999999999999999999999999999999876543

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.68  E-value=0.4  Score=39.88  Aligned_cols=111  Identities=14%  Similarity=0.185  Sum_probs=68.5

Q ss_pred             EeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCC--CeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           36 VTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        36 ItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |.|+ |.+|..++..++..+.  ++++.|.+.+.++-...++....+-  .+..+.   ..+.+++           ..-
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~~~~-----------~da   65 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDYSDC-----------KDA   65 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCHHHH-----------CCC
Confidence            3554 9999999999998884  6999999988777777767654311  122222   1233222           367


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      |++|.+||....+ .++.   .+.+..|+.    +++...+.+.+.    .+.+.|+++|.-
T Consensus        66 DivVitag~~rk~-g~~R---~dll~~N~~----i~~~~~~~i~~~----~p~~~vivvsNP  115 (299)
T TIGR01771        66 DLVVITAGAPQKP-GETR---LELVGRNVR----IMKSIVPEVVKS----GFDGIFLVATNP  115 (299)
T ss_pred             CEEEECCCCCCCC-CCCH---HHHHHHHHH----HHHHHHHHHHHh----CCCeEEEEeCCH
Confidence            9999999985322 2232   234555544    444444444443    256778877763

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.64  E-value=0.097  Score=42.72  Aligned_cols=40  Identities=23%  Similarity=0.263  Sum_probs=35.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~   69 (216)
                      ++..++|.|+++++|.++++.....|++|+.+.++.++.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  175 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE  175 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            5789999999999999999999999999999887765543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.62  E-value=0.11  Score=43.07  Aligned_cols=80  Identities=13%  Similarity=0.233  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+..++|.|+++++|..+++.+...|++++++.++.++.+.+    . .+ +... ++  |..+.+...+.+.+... ..
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~-~~-g~~~-~~--~~~~~~~~~~~~~~~~~-~~  209 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC----K-KL-AAII-LI--RYPDEEGFAPKVKKLTG-EK  209 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----H-Hc-CCcE-EE--ecCChhHHHHHHHHHhC-CC
Confidence            467899999999999999999999999988887776544333    1 12 2221 11  22222212222222221 23


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|+++++.|
T Consensus       210 ~~d~~i~~~~  219 (334)
T PTZ00354        210 GVNLVLDCVG  219 (334)
T ss_pred             CceEEEECCc
Confidence            5899998876

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.62  E-value=0.094  Score=44.12  Aligned_cols=91  Identities=19%  Similarity=0.203  Sum_probs=57.8

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-h-HH----HHHHHHhhcCCCeEEEEEccCCCHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-G-KD----VKETIVKEIPSAKVDAMELDLSSLASV   97 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~-~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~~   97 (216)
                      ....+++||++.|.|- |.||.++|+.+..-|.+|+..+|+... . +.    ..+ +.+.....++..+.|.++.+  .
T Consensus       139 ~~~~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~-l~ell~~sDii~l~~Plt~~--T  214 (324)
T COG1052         139 LLGFDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVD-LDELLAESDIISLHCPLTPE--T  214 (324)
T ss_pred             ccccCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceecc-HHHHHHhCCEEEEeCCCChH--H
Confidence            4456789999999987 999999999999888999999988631 0 00    000 22222245788888888864  3


Q ss_pred             HHHHHH-HHhhcCCccEEEECCc
Q 027991           98 RNFASE-YNIQHHQLNILINNAG  119 (216)
Q Consensus        98 ~~~~~~-~~~~~~~id~li~~Ag  119 (216)
                      ..++++ ..+.. +-.+++-|.|
T Consensus       215 ~hLin~~~l~~m-k~ga~lVNta  236 (324)
T COG1052         215 RHLINAEELAKM-KPGAILVNTA  236 (324)
T ss_pred             hhhcCHHHHHhC-CCCeEEEECC
Confidence            334443 22223 2344444444

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.61  E-value=0.099  Score=44.22  Aligned_cols=82  Identities=17%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++++||+| ++++|..+++.+...|+ +|++++++.++.+.+ .    .. +.. .++..+-.+..++.+.+.+... .
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~----~~-g~~-~vi~~~~~~~~~~~~~i~~~~~-~  247 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-R----EF-GAD-ATIDIDELPDPQRRAIVRDITG-G  247 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H----Hc-CCC-eEEcCcccccHHHHHHHHHHhC-C
Confidence            677899997 59999999999999999 899888876553322 1    22 221 1221111111122222333221 2


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|+++.+.|.
T Consensus       248 ~~~d~vid~~g~  259 (361)
T cd08231         248 RGADVVIEASGH  259 (361)
T ss_pred             CCCcEEEECCCC
Confidence            368999998874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.58  E-value=0.44  Score=39.76  Aligned_cols=121  Identities=19%  Similarity=0.138  Sum_probs=67.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC-CCHHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL-SSLASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~~~  109 (216)
                      +++.|.|+ |.+|..+|..++.+|. +|++++.+++..+.....+....+..... ...-. +|.+++           .
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~-~~i~~t~d~~~~-----------~   68 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFD-TKVTGTNNYADT-----------A   68 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCC-cEEEecCCHHHh-----------C
Confidence            46788887 8999999999999886 89999997654331211121111000000 00111 122211           2


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      .-|++|.++|..... ..+.   .+.+..|+.-...+++.+.++.        +.+.||++|.-...+
T Consensus        69 ~aDiVIitag~p~~~-~~sR---~~l~~~N~~iv~~i~~~I~~~~--------p~~~iIv~tNP~di~  124 (305)
T TIGR01763        69 NSDIVVITAGLPRKP-GMSR---EDLLSMNAGIVREVTGRIMEHS--------PNPIIVVVSNPLDAM  124 (305)
T ss_pred             CCCEEEEcCCCCCCc-CCCH---HHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEecCcHHHH
Confidence            579999999985322 1221   2355556655555555555542        356788888754433

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.56  E-value=0.043  Score=45.09  Aligned_cols=40  Identities=25%  Similarity=0.183  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||.++|.|.|.-+|..++..|.++|++|.++....
T Consensus       152 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T  191 (281)
T PRK14183        152 EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT  191 (281)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence            5679999999999999999999999999999999875443

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.54  E-value=0.13  Score=42.98  Aligned_cols=84  Identities=20%  Similarity=0.246  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH--HHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL--ASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~~~~  107 (216)
                      .+++++|.|+++++|.++++.....|++|+.+.++.+..++..+.+. +. +... ++..  .+.  ....+.+......
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~-g~~~-~~~~--~~~~~~~~~~~i~~~~~~  220 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-AL-GADH-VLTE--EELRSLLATELLKSAPGG  220 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hc-CCCE-EEeC--cccccccHHHHHHHHcCC
Confidence            57899999999999999999999999998888776543223333332 22 2221 1211  111  1233333332222


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                        ++|.++.+.|.
T Consensus       221 --~~d~vld~~g~  231 (341)
T cd08290         221 --RPKLALNCVGG  231 (341)
T ss_pred             --CceEEEECcCc
Confidence              68999988773

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	216
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		5e-15
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-07
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-07
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		6e-07
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-07
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		6e-07
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-06
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-06
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-06
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-06
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-06
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-06
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		3e-06
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-05
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-05
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-05
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		1e-05
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-05
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		3e-05
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		8e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		1e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-04
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		1e-04
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		1e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-04
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		2e-04
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-04
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		2e-04
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-04
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-04
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		3e-04
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		3e-04
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		3e-04
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		3e-04
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-04
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-04
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-04
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		3e-04
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-04
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		5e-04
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		6e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		6e-04
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		6e-04
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		8e-04
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		8e-04
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		8e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T ++TGA SG+G  TAR LA RG  V+M VRD   G+    T+     + +V+  ELDL 
Sbjct: 18  TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQ 72
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ 135
            L+SVR FA   +      ++LINNAGIM  P+ L+ D  E Q
Sbjct: 73  DLSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGFESQ 111

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 33  TAIVTGATSGIGTETA--RVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           T ++TGA++GIG  TA   + A  G + +++  R +   +++K+TI +E P+AKV   +L
Sbjct: 35  TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQL 94
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG 119
           D++    ++ F      +   ++IL+NNAG
Sbjct: 95  DITQAEKIKPFIENLPQEFKDIDILVNNAG 124

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A+VTGA+ GIG   AR L   G  VV+  RD+   + V+  IV      + ++   
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHAC 85
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPF 125
           DLS   ++  FA+     H + ++L+NNAG+   G P 
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL 123

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG +G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
             +K       G GRI+N++S G +
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK 168

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 80
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG +G        + EL                 
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTK 139
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
             +K       G GRI+N++S G +
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGK 164

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA+ GIG E A  LA +G  VV G     A  +  E   KE    K   + L++S 
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVV-GTATSQASAEKFENSXKE-KGFKARGLVLNISD 65
Query: 94  LASVRNFASEYNIQHHQLNILINNAGI 120
           + S++NF +E   ++  ++IL+NNAGI
Sbjct: 66  IESIQNFFAEIKAENLAIDILVNNAGI 92

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
             +K       G GRI+N++S G +
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK 168

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
             +K       G GRI+N++S G +
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK 168

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
             +K       G GRI+N++S G +
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK 168

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 80
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 139
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
             +K       G GRI+N++S G +
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGK 164

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 64
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 123
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
             +K       G GRI+N++S G +
Sbjct: 124 QVLKAGGMLERGTGRIVNIASTGGK 148

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAMELDL 91
           A+VTGATSGIG E AR L   G+ V +  R    G++   T +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
            S+  +    +    ++  +++L+NNAG  G        + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
             +K       G GRI+N++S G +
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK 168

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTG   GIG E  + L+  G+ VV+  RD+  G +  E + K      V   +LD++
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQLDVT 72
Query: 93  -SLASVRNFASEYNIQHHQLNILINNAGIMG 122
             +A++ + A        +L+IL+NNAG+ G
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGVAG 103

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELD 90
           +A+VTGA+ GIG   A  LA  G +V +   + A  K+  E +V+EI +  VD  A++ +
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 68
Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF 136
           ++    V+    E   Q   L++L+NNAGI       ++DN+ ++ 
Sbjct: 69  VADADEVKAMIKEVVSQFGSLDVLVNNAGI-------TRDNLLMRM 107

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G  A+VTG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXX 147
           DLS   +VR        Q  +++IL+NNAGI  T  +     +  +   A          
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 148 XXXXDTMKKTARKSGGEGRIINVSS 172
                 MKK      G GRIIN++S
Sbjct: 123 AAALPHMKKQ-----GFGRIINIAS 142

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G  A+VTG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXX 147
           DLS   +VR        Q  +++IL+NNAGI  T  +     +  +   A          
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 148 XXXXDTMKKTARKSGGEGRIINVSS 172
                 MKK      G GRIIN++S
Sbjct: 123 AAALPHMKKQ-----GFGRIINIAS 142

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G  A+VTG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXXX 147
           DLS   +VR        Q  +++IL+NNAGI  T  +     +  +   A          
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 148 XXXXDTMKKTARKSGGEGRIINVSS 172
                 MKK      G GRIIN++S
Sbjct: 123 AAALPHMKKQ-----GFGRIINIAS 142

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXX 149
           D++    +R+   +      +L+IL+NNAG+       ++ N E                
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYL 119
Query: 150 XXDTMKKTARKSGGEGR-IINVSS 172
             D M K   ++GGEG  IIN+SS
Sbjct: 120 GLDYMSK---QNGGEGGIIINMSS 140

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD--AMELD 90
           +A+VTGA+ GIG   A  LA  G +V +   + A  K+  E +V+EI +  VD  A++ +
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 62
Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI 120
           ++    V+    E   Q   L++L+NNAGI
Sbjct: 63  VADADEVKAXIKEVVSQFGSLDVLVNNAGI 92

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 33  TAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD- 90
            A+VTGA  GIG   AR L  +    VV+  RD+A G+   + +  E  S +   +++D 
Sbjct: 4   VALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDD 63
Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGI 120
           L S+ ++R+F  +   ++  LN+L+NNA +
Sbjct: 64  LQSIRALRDFLRK---EYGGLNVLVNNAAV 90

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A+VTGA+ GIG   AR L  +G+ VV   R +   +++            +     DLS+
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94
Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFAXXXXXXXXXXXXXX 151
              + +  S    QH  ++I INNAG+     +L  S    +  F               
Sbjct: 95  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 154
Query: 152 DTMKKTARKSGGEGRIINVSS-EGHRL 177
            +MK+   ++  +G IIN++S  GHR+
Sbjct: 155 QSMKE---RNVDDGHIININSMSGHRV 178

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 42/92 (45%)
Query: 28  DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           D S   A+VTG +SGIG  T  +L   G  V    RD    +  +  + +  P A++ A 
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAG 119
             D+     VR FA          +IL+NNAG
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAG 96

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           SG + I+TG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+ 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84
Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAG 119
            D++  +   +  +    +  +++IL+NNAG
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAG 115

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 27/170 (15%)
Query: 34  AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTGA  GIG    R L  +    VV+  RD+A G+   + +  E  S +    +LD+ 
Sbjct: 7   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH--QLDII 64
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM-----GTPFMLSKDNIELQFAXXXXXXXXXX 147
            L S+R        ++  L++L+NNA I       TPF +     EL             
Sbjct: 65  DLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQA---ELTMKTNFMGTRNVC 121
Query: 148 XXXXDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQS 197
                 +K        +GR++NVSS        EG+R   +N+ S   Q 
Sbjct: 122 TELLPLIKP-------QGRVVNVSST-------EGVR--ALNECSPELQQ 155

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--DLS 92
           +VTG + GIG    R+ A +G  V  GV + AA ++  + +V  I  +  +A+ +  D+ 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRV--GV-NYAANREAADAVVAAITESGGEAVAIPGDVG 86
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXXD 152
           + A +    S  + Q  +L+ L+NNAGI+  P  + + ++E                  +
Sbjct: 87  NAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAE 146
Query: 153 TMKKTAR-KSGGEGRIINVSS 172
            +++ +R  SG  G I+NVSS
Sbjct: 147 AVRRXSRLYSGQGGAIVNVSS 167

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTG + GIG   A+ L   G  V +  RD  A  D   T  +        A+  
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACAD---TATRLSAYGDCQAIPA 84
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG 119
           DLSS A  R  A        +L+IL+NNAG
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAG 114

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 34  AIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-L 91
           A+VTG   GIG    R L  L    VV+  RD+  G+   + +  E  S +   +++D L
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-----GTPFMLSKD 130
            S+ ++R+F  +   ++  L++L+NNAGI       TPF +  +
Sbjct: 67  QSIRALRDFLRK---EYGGLDVLVNNAGIAFKVADPTPFHIQAE 107

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 29  GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
           G    A+VTGA  GIG E A++LA    HV+     I+  +   +++V EI S   ++  
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVIC----ISRTQKSCDSVVDEIKSFGYESSG 97
Query: 89  L--DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ 135
              D+S    +    ++   +H  ++IL+NNAGI      L   N E +
Sbjct: 98  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWE 146

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 34  AIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-L 91
           A+VTG   GIG    R L  L    VV+  RD+  G+   + +  E  S +   +++D L
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-----GTPFMLSKD 130
            S+ ++R+F  +   ++  L++L+NNAGI       TPF +  +
Sbjct: 67  QSIRALRDFLRK---EYGGLDVLVNNAGIAFKVADPTPFHIQAE 107

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAM 87
           +G TA+VTGA SGIG   A   A  G HV+   R       VKE +  EI       +A+
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT----DGVKE-VADEIADGGGSAEAV 84
Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
             DL+ L    N A E      ++++L+NNAGI+
Sbjct: 85  VADLADLEGAANVAEELAAT-RRVDVLVNNAGII 117

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMELDL 91
           TA VTG +SGIG   AR LA RG+ V    RD    K+V   +         VD    D+
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARD---AKNVSAAVDGLRAAGHDVDGSSCDV 82
Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAXXXXXXXXXXXXXX 151
           +S   V    +    +   + IL+N+AG  G       D+  L                 
Sbjct: 83  TSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDD-ALWADVLDTNLTGVFRVTR 141
Query: 152 DTMKKTARKSGGEGRIINVSSEGHR 176
           + ++    +  G GRI+N++S G +
Sbjct: 142 EVLRAGGMREAGWGRIVNIASTGGK 166

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV--DAME 88
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET      ++KV   A+ 
Sbjct: 213 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAET------ASKVGGTALW 265
Query: 89  LDLSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDN 131
           LD+++  +V    SE+   HH  + +IL+NNAGI     + + D+
Sbjct: 266 LDVTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDD 309

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 205 GKVAIVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLD 259
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDN 131
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+
Sbjct: 260 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDD 301

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 197 GKVAIVTGAARGIGATIAEVFARDGAHVVA-IDVESAAENLAETASK----VGGTALWLD 251
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDN 131
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+
Sbjct: 252 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDD 293

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 221 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 275
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDN 131
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+
Sbjct: 276 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDD 317

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S
Sbjct: 26  VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHLDVS 84
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI 120
              SV  F+ +   +   +++++ NAG+
Sbjct: 85  KAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           G TA+VTG+T+GIG   A  L   G +V++ G R+    + +KE I  + P A +  +  
Sbjct: 10  GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKE-IRAQYPDAILQPVVA 68
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           DL +    ++   +Y     +++ILINN GI 
Sbjct: 69  DLGTEQGCQDVIEKY----PKVDILINNLGIF 96

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHLDVS 62
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI 120
              SV  F+ +   +   +++++ NAG+
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G  AIVTGA  GIG   A V A  G HVV  +   +A +++ ET  K        A+ LD
Sbjct: 234 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 288
Query: 91  LSSLASVRNFASEYNIQHH--QLNILINNAGIMGTPFMLSKDN 131
           +++  +V    SE+   HH  + +IL+NNAGI     + + D+
Sbjct: 289 VTADDAVDKI-SEHLRDHHGGKADILVNNAGITRDKLLANMDD 330

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME- 88
           G TA+VTG+TSGIG   A+VLA  G ++V+ G  D A         + EI    V A+  
Sbjct: 4   GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA-------LAEIARHGVKAVHH 56
Query: 89  -LDLSSLASVRNFASEYNIQHHQLNILINNAGI 120
             DLS +A +    +    +   ++IL+NNAGI
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGI 89

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL- 89
           G  A+VTGA+ GIG   A  LA +G +VV+   + A  +     +V EI     DA+ + 
Sbjct: 4   GKVALVTGASRGIGRAIAIDLAKQGANVVV---NYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 90  -DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF 136
            D+++   V N   +      Q++IL+NNAG+       +KDN+ ++ 
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGV-------TKDNLLMRM 101

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LDLS 92
           ++TGA+ GIG   AR L + G  +++G R  A      E I  EI  A   A+   LD++
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQAR----IEAIATEIRDAGGTALAQVLDVT 63
Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM 121
              SV  FA        ++++L+NNAG+M
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVM 92

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA+VTGA  GIG   A  LA  G  V++   +    K    +I K     K  A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAA 59
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL 134
           D+S   SV+   +E       ++IL+NNA I+  PF+ + D+++L
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIV--PFV-AWDDVDL 101

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV--KETIVKEIPSAKVDAME 88
           G  A+VTG+TSGIG   A  LA  G  VV  +      +D+  + + ++     K   + 
Sbjct: 4   GKKAVVTGSTSGIGLAMATELAKAGADVV--INGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFAXXXXXXXXX 146
            DLS   + R+F ++       L+IL+NNAGI  T  +     D      A         
Sbjct: 62  ADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHG 121
Query: 147 XXXXXDTMKKTARKSGGEGRIINVSS 172
                  M+K      G GRIIN++S
Sbjct: 122 TAAALPIMQKQ-----GWGRIINIAS 142

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
           A++TGA SGIG  TA  LA  GV V    R     ++V + IV      +  A+E D+S 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSD 88
Query: 94  LASVRNFASEYNIQHHQLNILINNAGIMG 122
               RN   +  ++   L+I++ NAGI G
Sbjct: 89  ELQXRNAVRDLVLKFGHLDIVVANAGING 117

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA+VTGA  GIG   A  LA  G  V++   +    K    +I K     K  A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAA 59
Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL 134
           D+S   SV+   +E       ++IL+NNA I+  PF ++ D+++L
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIV--PF-VAWDDVDL 101

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMEL 89
           G TA+VTG + GIG      LA  G  V    R+    K++ + + +      KV+A   
Sbjct: 8   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRSKGFKVEASVC 64
Query: 90  DLSSLASVRNFASEY-NIQHHQLNILINNAGIM 121
           DLSS +  +   +   N  H +LNIL+NNAGI+
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGIV 97

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMEL 89
           G TA+VTG + GIG      LA  G  V    R+    K++ + + +      KV+A   
Sbjct: 9   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRSKGFKVEASVC 65
Query: 90  DLSSLASVRNFASEY-NIQHHQLNILINNAGIM 121
           DLSS +  +   +   N  H +LNIL+NNAGI+
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIV 98

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	216
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-74
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-54
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-40
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	6e-29
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-28
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-27
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-27
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	5e-27
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	5e-27
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	5e-27
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	6e-27
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	8e-27
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-26
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-26
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	3e-26
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-26
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-25
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-25
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-25
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-25
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-25
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-25
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-25
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	6e-25
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	9e-25
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-24
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-24
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-24
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-24
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-24
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-24
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-24
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-24
1xkq_A	280	Short-chain reductase family member (5D234); parra	7e-24
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	8e-24
1xhl_A	297	Short-chain dehydrogenase/reductase family member	9e-24
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-23
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-23
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-23
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-23
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-23
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-23
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-23
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	5e-23
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	7e-23
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	7e-23
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	8e-23
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-22
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-22
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-22
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-22
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-22
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-22
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-22
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	4e-22
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-22
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-22
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	4e-22
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	5e-22
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-22
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	7e-22
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	8e-22
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	8e-22
4dqx_A	277	Probable oxidoreductase protein; structural genomi	8e-22
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	9e-22
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-21
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-21
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-21
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-21
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-21
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-21
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-21
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-21
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-21
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-21
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-21
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-21
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-21
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-21
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-21
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-21
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	4e-21
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-21
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-21
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	5e-21
4e4y_A	244	Short chain dehydrogenase family protein; structur	6e-21
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	7e-21
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	8e-21
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-20
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-20
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-20
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-20
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-20
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-20
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	3e-20
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-20
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-20
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-20
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-20
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-20
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	5e-20
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-20
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	6e-20
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-20
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	7e-20
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-20
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	7e-20
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	8e-20
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	8e-20
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	8e-20
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	8e-20
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	9e-20
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-19
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-19
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-19
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-19
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-19
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-19
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-19
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-19
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-19
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-19
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-19
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-19
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-19
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-19
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-19
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-19
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-19
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-19
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	4e-19
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-19
3imf_A	257	Short chain dehydrogenase; structural genomics, in	4e-19
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-19
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	4e-19
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	4e-19
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-19
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	5e-19
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-19
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-19
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-19
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	7e-19
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	8e-19
3cxt_A	291	Dehydrogenase with different specificities; rossma	8e-19
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	9e-19
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	9e-19
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-18
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-18
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-18
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-18
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-18
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-18
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-18
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	3e-18
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-18
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	7e-18
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-18
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-17
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-17
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-17
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-16
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-16
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-16
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	3e-16
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-16
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	9e-16
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-15
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-15
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-10
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-15
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	6e-15
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-14
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-14
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-14
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	6e-14
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	7e-14
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-13
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-13
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-13
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-13
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-13
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-12
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	5e-11
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  225 bits (577), Expect = 2e-74
 Identities = 69/185 (37%), Positives = 93/185 (50%), Gaps = 24/185 (12%)

Query: 13  GFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK 72
           G     TA ++      +  T ++TGA SG+G  TAR LA RG  V+M VRD   G+   
Sbjct: 1   GSMTGWTAADLPSF---AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAA 57

Query: 73  ETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI 132
            T+     + +V+  ELDL  L+SVR FA   +      ++LINNAGIM  P+ L+ D  
Sbjct: 58  RTM-----AGQVEVRELDLQDLSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGF 108

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS 192
           E Q  TNHLGHF LTNLLL  +           R++ VSS  H       I  + +N  S
Sbjct: 109 ESQIGTNHLGHFALTNLLLPRLT---------DRVVTVSSMAHWPG---RINLEDLNWRS 156

Query: 193 GSFQS 197
             +  
Sbjct: 157 RRYSP 161

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  174 bits (443), Expect = 2e-54
 Identities = 42/154 (27%), Positives = 62/154 (40%), Gaps = 12/154 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME 88
               A+VTG   GIG    R L  L    VV+  RD+  G+   + +  E         +
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQ 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSK--DNIELQFATNHLGHFLL 146
           LD+  L S+R        ++  L++L+NNAGI       +      E+   TN  G   +
Sbjct: 61  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDV 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
              LL  +K         GR++NVSS     A  
Sbjct: 121 CTELLPLIKPQ-------GRVVNVSSIMSVRALK 147

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  138 bits (348), Expect = 5e-40
 Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 39/184 (21%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VTG   GIG E  + L+  G+ VV+  RD+  G +  E + K      V   +L
Sbjct: 11  KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQL 69

Query: 90  DLSS-LASVRNFASEYNIQHHQLNILINNAGIMGTPF----------------------- 125
           D++  +A++ + A        +L+IL+NNAG+ G                          
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129

Query: 126 ---------MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
                      + +  E     N+ G   +T +L+  ++          RI+NVSS    
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL-----SDSPRIVNVSSSTGS 184

Query: 177 LAYH 180
           L Y 
Sbjct: 185 LKYV 188

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  107 bits (270), Expect = 6e-29
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDL 91
            AI+TGA+ GIG   A  LA  G  VV+  R     + V + I++      +   + LD+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           +          + + ++  ++IL+N A +          DN       N +  + +   +
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTV 128

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
            + MK   +K+   G I NV+S
Sbjct: 129 TEIMKV--QKN---GYIFNVAS 145

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  106 bits (266), Expect = 4e-28
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   ++TGA  GIG  TA   A     +V+   +    ++           AKV    +
Sbjct: 30  TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVV 87

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           D S+   + + A +   +   ++IL+NNAG++  +         IE  F  N L HF  T
Sbjct: 88  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 147

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  M K        G I+ V+S
Sbjct: 148 KAFLPAMTKN-----NHGHIVTVAS 167

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  102 bits (258), Expect = 2e-27
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGA+ GIG   AR LA  G  + +G R +   + +   +++E    +V    LD+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVS 62

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLL 150
              SV  F+ +   +   +++++ NAG+        LS++        N LG +      
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHR 176
           LD++K+T     G   ++  S    R
Sbjct: 123 LDSLKRT-----GGLALVTTSDVSAR 143

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  103 bits (260), Expect = 3e-27
 Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 8/147 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A++TG++SGIG   A   A  G H+V+  R +    +   ++ ++    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAV 64

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+++   V              +IL+NNAG       M  + +  +  +    +    L 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEG 174
             L+  M+       G G II+ +S  
Sbjct: 125 RGLVPGMRA-----RGGGAIIHNASIC 146

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  103 bits (258), Expect = 5e-27
 Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 8/145 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VT  +SG+G  +A  LA  G  +++  R+    +     I   +  A+VD +  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+     +     +        +IL+ + G    G    L  ++ +  +         + 
Sbjct: 66  DIREPGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVG 124

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
               + M +      G GR++ + S
Sbjct: 125 RRAAEQMVE-----KGWGRMVYIGS 144

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  102 bits (257), Expect = 5e-27
 Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 15/155 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
                ++TGA+ G G   A  LA     G  +++  R  +  + +KE +  + P  KV  
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 87  MELDLSSLASVRNFASE----YNIQHHQLNILINNAGIMGTPFMLSKDNIELQ-----FA 137
              DL + A V+   S        +  Q  +LINNA  +G       +  +L      +A
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N      LT+  L+  + +    G    ++N+SS
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISS 156

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  103 bits (258), Expect = 5e-27
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
             ++TGA+ GIG   AR L + G  +++G R     +   E I  EI  A     A  LD
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARR----QARIEAIATEIRDAGGTALAQVLD 61

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTN 148
           ++   SV  FA        ++++L+NNAG+M    +  +  D  E     N  G      
Sbjct: 62  VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIG 121

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            +L  M+  A++S   G+IIN+ S
Sbjct: 122 AVLPIME--AQRS---GQIINIGS 140

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  101 bits (255), Expect = 6e-27
 Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 13/152 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S    IVTGA SG+G      L  RG  V M  R     +  +  +        V  +  
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVA 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           DL+    V    +          ++++ AG     P    + + I     +N +   L+ 
Sbjct: 57  DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
              +  + +        G + NV S   ++  
Sbjct: 117 QQTVRLIGERG------GVLANVLSSAAQVGK 142

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  102 bits (256), Expect = 8e-27
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG+T+GIG   A  L   G +V++  R      +  + I  + P A +  +  
Sbjct: 9   KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA 68

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           DL +    ++   +Y     +++ILINN GI     +  +  ++    F  N +    LT
Sbjct: 69  DLGTEQGCQDVIEKYP----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLT 124

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSE 173
              L  M +       EGR+I ++SE
Sbjct: 125 RSYLKKMIER-----KEGRVIFIASE 145

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  101 bits (255), Expect = 2e-26
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 6/147 (4%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+ GIG   AR L  +G+ VV   R +   +++            +     DLS
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTNLL 150
           +   + +  S    QH  ++I INNAG+      +  S    +  F  N L   + T   
Sbjct: 94  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 153

Query: 151 LDTMKKTARKSGGEGRIINVSS-EGHR 176
             +MK+   ++  +G IIN++S  GHR
Sbjct: 154 YQSMKE---RNVDDGHIININSMSGHR 177

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  101 bits (253), Expect = 3e-26
 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 7/145 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S   A+VTG +SGIG  T  +L   G  V    RD    +  +  + +  P A++ A   
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVC 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+     VR FA          +IL+NNAG    + F   + +    +            
Sbjct: 67  DVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPV 126

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  ++        +  I+ V+S
Sbjct: 127 RAFLPQLESR-----ADAAIVCVNS 146

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  101 bits (254), Expect = 3e-26
 Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 3/146 (2%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA VTG  +G+G    R L  +G  V +      +      T+  E    +V  ++L
Sbjct: 7   AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQL 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++S    +  A E   +   ++IL NNAG+         S D+ +     N  G     
Sbjct: 67  DVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGV 126

Query: 148 NLLLDTMKKTARKS-GGEGRIINVSS 172
              +  M +  +      G ++N +S
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTAS 152

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 99.7 bits (249), Expect = 6e-26
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 18/153 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           + +VTGA  GIG    + L       H++   RD+    +     +K I  ++V  + L 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLT 59

Query: 91  LSSLASVRNFASEYNIQH--HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFL 145
           ++   S+  F S+         L++LINNAG++   GT    ++  I  Q   N     L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 146 LTNLLLDTMKKTARKSGGE------GRIINVSS 172
           LT  LL  +K  A K  G+        +I +SS
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISS 152

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 98.9 bits (247), Expect = 1e-25
 Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    I   A  GIG +T+R L  R +   + +  +     + E      P   +     
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK-AINPKVNITFHTY 62

Query: 90  DLS-SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTN 148
           D++  +A  +    +   Q   ++ILIN AGI+          IE   A N  G    T 
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTT 116

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
            +LD   K  RK G  G I N+ S
Sbjct: 117 AILDFWDK--RKGGPGGIIANICS 138

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 99.7 bits (249), Expect = 1e-25
 Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 13/171 (7%)

Query: 18  STAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKET 74
           S   +  + +     T ++TGA++GIG  TA          + +++  R +   +++K+T
Sbjct: 22  SQGRKAAERLAKK--TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT 79

Query: 75  IVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM--LSKDN 131
           I +E P+AKV   +LD++    ++ F      +   ++IL+NNAG  +G+  +  ++ ++
Sbjct: 80  IDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED 139

Query: 132 IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           I+  F TN      +T  +L   +         G I+N+ S   R AY  G
Sbjct: 140 IQDVFDTNVTALINITQAVLPIFQAK-----NSGDIVNLGSIAGRDAYPTG 185

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 98.4 bits (246), Expect = 2e-25
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
            G   +VTGA  GIG   AR  A  G  VV+  R  A+  +V + I     P   + A+ 
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFL 145
           L+ ++    R  A+    +  +L+ L++NA I+G  TP   L  ++       N    F+
Sbjct: 73  LENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFM 132

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           LT  LL  +    ++S     I   SS
Sbjct: 133 LTRALLPLL----KRSED-ASIAFTSS 154

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 98.4 bits (246), Expect = 2e-25
 Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 14/154 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A++TGA+SGIG  TAR LA  G  V +  R      +    +  E+ +A  KV  +
Sbjct: 6   QGKVALITGASSGIGEATARALAAEGAAVAIAARR----VEKLRALGDELTAAGAKVHVL 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFL 145
           ELD++    V    +        L+IL+NNAGIM    +      +      TN LG   
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMY 121

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
           +T   L  + +       +G ++ +SS   R+  
Sbjct: 122 MTRAALPHLLR------SKGTVVQMSSIAGRVNV 149

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 98.0 bits (245), Expect = 2e-25
 Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 13/154 (8%)

Query: 32  LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           +  +VTGAT+G G    R    +G  V+   R     ++  + +  E+    +   +LD+
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRR----QERLQELKDEL-GDNLYIAQLDV 55

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM--LSKDNIELQFATNHLGHFLLTN 148
            + A++    +    +   ++IL+NNAG+ +G       S ++ E    TN+ G   +T 
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
            +L  M +        G IIN+ S      Y  G
Sbjct: 116 AVLPGMVER-----NHGHIINIGSTAGSWPYAGG 144

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 98.1 bits (245), Expect = 3e-25
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 12/154 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAME 88
              T  +TGATSG G   AR  A  G  +V+  R     ++  + +  E+    +V  + 
Sbjct: 20  MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRR----EERLQALAGELSAKTRVLPLT 75

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM--LSKDNIELQFATNHLGHFL 145
           LD+   A++         +   L  LINNAG+  GT        D+ +    TN  G   
Sbjct: 76  LDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLY 135

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
            T LLL  +   A  +G    I+N+ S   +  Y
Sbjct: 136 STRLLLPRLI--AHGAGAS--IVNLGSVAGKWPY 165

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 97.7 bits (244), Expect = 4e-25
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D++    +R+   +      +L+IL+NNAG+          N E     N +     T L
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE------KNWEKTLQINLVSVISGTYL 119

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
            LD M K  +  G  G IIN+SS
Sbjct: 120 GLDYMSK--QNGGEGGIIINMSS 140

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 97.6 bits (244), Expect = 6e-25
 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 9/165 (5%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK 69
           GP   S ++T +     +   G  A++TGAT GIG + AR  A  G  +V+  RD++   
Sbjct: 1   GPG--SMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD 58

Query: 70  DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-L 127
             +  + ++     V  + +DL+   +    A         L++L+NNAGI    P +  
Sbjct: 59  AARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDT 117

Query: 128 SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
                +   A N     LL + +   M      +G  G II V+S
Sbjct: 118 DPQLFDATIAVNLRAPALLASAVGKAM----VAAGEGGAIITVAS 158

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 96.9 bits (242), Expect = 9e-25
 Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 10/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A+VTGA+ GIG   AR L   G  VV+  RD+   + V+  IV      + ++   
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHAC 85

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           DLS   ++  FA+     H + ++L+NNAG+     P   +     +   A N    +LL
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLL 145

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
                  M     K    G IIN+SS
Sbjct: 146 LRAFAPAMIA--AKR---GHIINISS 166

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 96.9 bits (242), Expect = 1e-24
 Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 9/145 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   IVTGA+ GIG E A  LA  G HVV+  R     + V      E+ +A    +  
Sbjct: 27  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAG 85

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
            +  +     F ++       L++LI N         F     ++      N L + +LT
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 145

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  +K+        G I+ VSS
Sbjct: 146 VAALPMLKQ------SNGSIVVVSS 164

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 96.5 bits (241), Expect = 2e-24
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           +   AI+TG+++GIG  TA + A  G  V +  R     ++ ++ I+   +    V+++ 
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI------MGTPFMLSKDNIELQFATNHLG 142
            D+++ A      S    +  +L+IL+NNAG         T    S ++ +     N   
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
              LT   +  +  T       G I+N+SS
Sbjct: 125 VIALTKKAVPHLSSTK------GEIVNISS 148

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 95.7 bits (239), Expect = 2e-24
 Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 17/145 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VTGAT G+G E  + L+   +   +G        +    + +      V+ +E 
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRN-----PEHLAALAEIE---GVEPIES 55

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+           +       ++ L++ A +   T     S          N +    L+
Sbjct: 56  DIVKEVLEEGGVDKLK-NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELS 114

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             LL  ++         G +I ++S
Sbjct: 115 RQLLPALRA------ASGCVIYINS 133

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 95.3 bits (238), Expect = 2e-24
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 13/142 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             ++TGA+ GIG  TAR+L  +G  V +  RD    +   + +  E+  A    +  D+ 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARD----EKRLQALAAELEGAL--PLPGDVR 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLTNLL 150
                    +       +L+ L+NNAG+     +  L+ +   L   TN  G FL     
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           +  + +      G G I+NV S
Sbjct: 121 VPALLRR-----GGGTIVNVGS 137

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 96.3 bits (240), Expect = 3e-24
 Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 8/145 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG  SGIG  TA   A RG  +V+   D  A +     +  +        +  
Sbjct: 30  DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVC 87

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D+  L  +   A E       ++++ +NAGI+  G    ++ D+       +  G     
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAV 147

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  +     + G  G I   +S
Sbjct: 148 EAFLPRL----LEQGTGGHIAFTAS 168

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 95.3 bits (238), Expect = 4e-24
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 9/147 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAME 88
           +    +VTGA+ GIG E A   A  G  V++  R+    + V   I +E     +   ++
Sbjct: 11  NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILD 70

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QFATNHLGHFL 145
           L   +  + +  A    + + +L+ +++NAG++G    +S+ N ++       N    F+
Sbjct: 71  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           LT  LL  +     KS   G ++  SS
Sbjct: 131 LTQALLPLL----LKSDA-GSLVFTSS 152

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 94.6 bits (236), Expect = 4e-24
 Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 16/142 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             ++TGA+SG+G E A++    G    +  R     +    T+   + S  V     DL+
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRS----ESKLSTVTNCL-SNNVGYRARDLA 57

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNLL 150
           S   V     +        + ++++AG            + I+     N      +   L
Sbjct: 58  SHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           +   K   +       ++ + S
Sbjct: 115 VKRYK--DQPVN----VVMIMS 130

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 94.9 bits (237), Expect = 5e-24
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AI+TGA +GIG E A   A  G  VV+   +  A   V + I +     +  A   
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRC 67

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           D++S   +   A     +  +++IL+NNAG     PF +   +    +  N    F L+ 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ 127

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
           L+   M+K      G G I+ ++S
Sbjct: 128 LVAPEMEKN-----GGGVILTITS 146

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 95.0 bits (237), Expect = 7e-24
 Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 13/150 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           S  T I+TG+++GIG  TA + A  G +V +  R     ++ ++ I+K  +   +V+++ 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQ-----FATNHLG 142
            D+++        +    Q  ++++L+NNAG      F  +  +  +         N   
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
              +T  +   +  +       G I+NVSS
Sbjct: 125 VIEMTKKVKPHLVASK------GEIVNVSS 148

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 94.3 bits (235), Expect = 8e-24
 Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 12/145 (8%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   +VTG + GIG     VL       V  V  +A  +   + + ++    +   +  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTV--VYGVARSEAPLKKLKEKYGD-RFFYVVGD 58

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLT 147
           ++  + ++   +     H +++ L+ NAG++        +  +  +  +  N      L 
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            + L  +KKT       G ++ VSS
Sbjct: 119 GIALPELKKTN------GNVVFVSS 137

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 95.0 bits (237), Expect = 9e-24
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           SG + I+TG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+ 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHF 144
            D++  +   +  +    +  +++IL+NNAG              +  +  F  N     
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
            +T    + + KT       G I+NVSS
Sbjct: 145 EMTQKTKEHLIKTK------GEIVNVSS 166

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 94.4 bits (235), Expect = 1e-23
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 17/155 (10%)

Query: 33  TAIVTGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           + ++TG   G+G    + L        H+    R+    K++++        + +  +E+
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN---HSNIHILEI 79

Query: 90  DLSSLASVRNFASEYN--IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHF 144
           DL +  +     ++     +   LN+L NNAGI         +    +     TN +   
Sbjct: 80  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139

Query: 145 LLTNLLLDTMKKTARK------SGGEGRIINVSSE 173
           +L    L  +KK A+         G   IIN+SS 
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI 174

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 93.8 bits (234), Expect = 2e-23
 Identities = 28/148 (18%), Positives = 64/148 (43%), Gaps = 15/148 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +    +++G    +GT  AR  A +G  +V+  R +   +DV     K++     +  ++
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDV----AKQVTDTGRRALSV 65

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
             D++  A V +   E    + +++++INNA  +    PF   + +++         G  
Sbjct: 66  GTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGAL 125

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
            L       +++       +G ++NV+S
Sbjct: 126 RLIQGFTPALEE------SKGAVVNVNS 147

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 93.1 bits (232), Expect = 2e-23
 Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 14/144 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
           T  V GA   IG E A+  A  G  V  G R+          +V EI +A  ++ A  LD
Sbjct: 9   TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL----APLVAEIEAAGGRIVARSLD 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLTN 148
             +   V  F +  +  H  L + I N G     P +  +       +       F+   
Sbjct: 65  ARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR 123

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
                M        G+G+I    +
Sbjct: 124 ESARLMLA-----HGQGKIFFTGA 142

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 93.0 bits (232), Expect = 2e-23
 Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 8/144 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +   AIVTGA +GIG   A   A  G  VV+        + V   I +     K   +E 
Sbjct: 11  NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLEC 68

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIELQFATNHLGHFLLTN 148
           +++              Q  ++ +L+NNAG     PF +   + E  F  N    F L+ 
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQ 128

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
           L    M+K      G G I+N+SS
Sbjct: 129 LAAPHMQKA-----GGGAILNISS 147

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 93.5 bits (233), Expect = 3e-23
 Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 9/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
              TA++TG+TSGIG   AR LA  G ++V+ G       + V + +     S  V    
Sbjct: 24  MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-SSGTVLHHP 82

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
            D++  + + +  +    +    +IL+NNAG+           +  +   A N    F  
Sbjct: 83  ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHT 142

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
               +  MKK      G GRIIN++S
Sbjct: 143 IRGAIPPMKK-----KGWGRIINIAS 163

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 93.0 bits (232), Expect = 3e-23
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 8/146 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    ++TG  SG+G  TA  LA  G  + +        +  K  +++  P A+V     
Sbjct: 12  TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 71

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           D+S  A V  + +    +  +++   NNAGI G   P    +    +   + N  G FL 
Sbjct: 72  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 131

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
              +L  M++      G G ++N +S
Sbjct: 132 LEKVLKIMREQ-----GSGMVVNTAS 152

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 93.0 bits (232), Expect = 3e-23
 Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 6/145 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+VTG + GIG   A+ L   G  V +  RD  A  D    +          A+  
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPA 84

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           DLSS A  R  A        +L+IL+NNAG   G           E     N    F   
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCI 144

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             LL  ++++A       R+IN+ S
Sbjct: 145 QQLLPLLRRSASAENP-ARVINIGS 168

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 92.2 bits (230), Expect = 5e-23
 Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 8/148 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G   ++TG++ GIG  TAR+ A  G  V +  R   A     +  +  + +        
Sbjct: 6   KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN---IDETIASMRADGGDAAFF 62

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
             DL++  + +    E+  +   +++LINNAG +    P   +     +     N     
Sbjct: 63  AADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           + T   L  +   A+ SG    +I+  S
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGS 150

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 91.4 bits (228), Expect = 7e-23
 Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 16/145 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SGL A+VTGA  GIG +T + L   G  VV   R  +    + +          ++ + +
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCV 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           DL    +              +++L+NNA + +  PF+ ++K+  +  F+ N    F ++
Sbjct: 60  DLGDWDATEKALGGI----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVS 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            ++   M       G  G I+NVSS
Sbjct: 116 QMVARDM----INRGVPGSIVNVSS 136

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 91.5 bits (228), Expect = 7e-23
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 12/147 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG---KDVKETIVKEIPSA--KVDAM 87
             ++TGA  GIG   A   A    H       +          E I  E  +     D +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
             D+S +A VR   +    ++  ++ L+NNAG+        L++++ +    TN  G F 
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           LT  L   M++  + S   G I  ++S
Sbjct: 124 LTQALFALMER--QHS---GHIFFITS 145

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 91.9 bits (229), Expect = 8e-23
 Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 11/146 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               AIVTGA SG+G   A  LA  G  V +  R + A ++       EI       +  
Sbjct: 27  GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET----AAEIG-DDALCVPT 81

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLL 146
           D++   SVR   +    +  ++++L NNAG       +   +    +    TN  G FL 
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLC 141

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T      MK   ++  G GRIIN  S
Sbjct: 142 TQEAFRVMKA--QEPRG-GRIINNGS 164

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 91.0 bits (227), Expect = 1e-22
 Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 16/145 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA  GIG  T + L   G  VV   R  A    +            ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCV 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           DL    +              +++L+NNA +    PF+ ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATERALGSV----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            ++   +       G  G I+NVSS
Sbjct: 116 QIVARGL----IARGVPGAIVNVSS 136

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 91.0 bits (227), Expect = 1e-22
 Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 14/148 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
                IVTGA SGIG   A+  AL    VV           +    V+E+     +V  +
Sbjct: 6   KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQI----VQELRGMGKEVLGV 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
           + D+S    V  F       + ++++L NNAGIM   TP   +S +  E   A N    F
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAF 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
             +  ++  M K      G+G I+N +S
Sbjct: 122 YSSRAVIPIMLKQ-----GKGVIVNTAS 144

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 90.8 bits (226), Expect = 2e-22
 Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
            G  A+VTG+TSGIG   A  LA +G  +V+ G  D A  + V+  +  +    KV    
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDG 61

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
            DLS   +VR        Q  +++IL+NNAGI           +  +   A N    F  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T   L  MKK      G GRIIN++S
Sbjct: 122 TAAALPHMKK-----QGFGRIINIAS 142

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 91.1 bits (227), Expect = 2e-22
 Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 7/146 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG  +G+G   A+ L+  G  VV+  R           I        V A+  
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVC 90

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           D+     V    +    +  +L++L+NNAG      P   ++ +      A N  G FL 
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T      MK    +    GRIIN  S
Sbjct: 151 TQHAFRMMKAQTPRG---GRIINNGS 173

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 90.2 bits (225), Expect = 3e-22
 Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VT +T GIG   AR LA  G HVV+  R          T+  E     V     
Sbjct: 13  ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVC 70

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM-----LSKDNIELQFATNHLGHF 144
            +          +     H  ++IL++NA +   PF       +++  +     N     
Sbjct: 71  HVGKAEDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDATEEVWDKILHVNVKATV 128

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L+T  ++  M+K      G G ++ VSS
Sbjct: 129 LMTKAVVPEMEKR-----GGGSVLIVSS 151

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 90.2 bits (225), Expect = 3e-22
 Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 8/145 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA+VTG+  G+G   A  LA  G  V++         +  +T+ ++        +  
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAF 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D++   ++    S+ + +   ++ILINNAGI    P + L  +N +    TN    FL++
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVS 125

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
                 M          G+IIN+ S
Sbjct: 126 RSAAKRMI----ARNSGGKIINIGS 146

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 91.3 bits (227), Expect = 3e-22
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 13/146 (8%)

Query: 33  TAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
             ++TG +SGIG   A  LA    +   V   +RD+     + E       P   ++ ++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLL 146
           LD+    SV        +   ++++L+ NAG+  +G    L +D +      N +G   +
Sbjct: 64  LDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
               L  MK+  R S   GR++   S
Sbjct: 122 LQAFLPDMKR--RGS---GRVLVTGS 142

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 89.9 bits (224), Expect = 3e-22
 Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G TA+VTG+TSGIG   A+VLA  G ++V+       G       + EI     K    
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANIVL------NGFGDPAPALAEIARHGVKAVHH 56

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
             DLS +A +    +    +   ++IL+NNAGI    P      ++ +   A N    F 
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFH 116

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
            T L L  M+         GRIIN++S
Sbjct: 117 GTRLALPGMRA-----RNWGRIINIAS 138

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 89.9 bits (224), Expect = 4e-22
 Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 10/144 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
            A+VTG   GIG   +  LA  G  +   V D+   ++     +K I +A  K   + LD
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIA--VADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTN 148
           ++  A+  +   E   +    ++L+NNAGI    P + +++++++  ++ N    F    
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
                  +   K    G+IIN +S
Sbjct: 122 AASRKFDELGVK----GKIINAAS 141

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 90.0 bits (224), Expect = 4e-22
 Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 17/167 (10%)

Query: 15  SASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET 74
           ++ +  +++  G        ++TGA+SGIG   AR  +  G  +++  R +         
Sbjct: 2   ASMTGGQQMGRGSMKK--LVVITGASSGIGEAIARRFSEEGHPLLLLARRVER------- 52

Query: 75  IVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNI 132
            +K +        ++D++   +     +     +   + ++NNAG+M          +  
Sbjct: 53  -LKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEW 111

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
           +  F  N LG       +L  MK  AR     G IIN+SS   +  +
Sbjct: 112 QRMFDVNVLGLLNGMQAVLAPMK--ARNC---GTIINISSIAGKKTF 153

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 89.9 bits (224), Expect = 4e-22
 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 15/146 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG   GIG    R     G  VV+  +D + G      + +E+P A    +  
Sbjct: 8   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELPGAV--FILC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLL 146
           D++    V+   SE   +  +L+ ++NNAG    P      S          N LG + L
Sbjct: 62  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T L L  ++K       +G +IN+SS
Sbjct: 122 TKLALPYLRK------SQGNVINISS 141

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 89.5 bits (223), Expect = 4e-22
 Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 12/144 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
            A+VTGA  GIG   A  L   G  V +   + A  K V      EI  A     A+++D
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAV----ASEINQAGGHAVAVKVD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTN 148
           +S    V     +        ++++NNAG+   TP   ++ + ++  +  N  G      
Sbjct: 60  VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQ 119

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
             ++  KK        G+IIN  S
Sbjct: 120 AAVEAFKKEGHG----GKIINACS 139

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 89.5 bits (223), Expect = 5e-22
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 11/147 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A++TGA SG G   A+  A  G  VV+  RD A  + V      EI      A+  
Sbjct: 8   EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV----AGEIG-DAALAVAA 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FMLSKDNIELQFATNHLGHFLL 146
           D+S  A V         +  +++IL+NNAGI   P    ++  +  +     N  G +L+
Sbjct: 63  DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 147 TNLLLDTMKKTARKSGGE-GRIINVSS 172
           T+ L+   K+    + G+   I+NV+S
Sbjct: 123 TSKLIPHFKE--NGAKGQECVILNVAS 147

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 90.6 bits (225), Expect = 5e-22
 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 10/152 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMEL 89
             ++TGA+SG G  TA  LA  G  V   +RDI          +          +  +EL
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           D+ S  SV     +   +  ++++LI+NAG M        + +     +  N L    + 
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
              L  M++  +K    G +I +SS       
Sbjct: 127 RAALPHMRR--QKH---GLLIWISSSSSAGGT 153

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 88.0 bits (219), Expect = 7e-22
 Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 24/143 (16%)

Query: 32  LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
           +  ++TGAT G+G   AR  AL+G  +++  R   A  ++   +          A+  DL
Sbjct: 1   MRVLITGATGGLGGAFAR--ALKGHDLLLSGRRAGALAELAREV-------GARALPADL 51

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGT-PFM-LSKDNIELQFATNHLGHFLLTNL 149
           +     +    E       L++L++  G  G        +D +E   A +     L    
Sbjct: 52  ADELEAKALLEE----AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAF 103

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
           +L   +          R +   +
Sbjct: 104 VLKHARF-----QKGARAVFFGA 121

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 89.1 bits (222), Expect = 8e-22
 Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G +A++TG+  GIG   A      G  V +   DI   +        EI      A+++
Sbjct: 7   EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQA----AAEI-GPAAYAVQM 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++   S+    +        L+IL+NNA +    P + +++++ E  FA N  G     
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
                 M    R     G+IIN++S
Sbjct: 122 QAAARQMIAQGRG----GKIINMAS 142

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 89.5 bits (223), Expect = 8e-22
 Identities = 27/147 (18%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA-KVDAME 88
              T +VTG  SGIG   A  L   G  V++  R+        + +     +   +    
Sbjct: 10  QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEP 69

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT--PFM-LSKDNIELQFATNHLGHFL 145
            D+++              H +L+ +++ AG      P   +  +        N  G   
Sbjct: 70  TDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMY 129

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           +       M +     GG G  + +SS
Sbjct: 130 VLKHAAREMVR-----GGGGSFVGISS 151

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 89.1 bits (222), Expect = 8e-22
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 12/145 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    IVTG  SGIG  TA + A  G +VV+   +  A   V      EI  +K   + +
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV----ANEIG-SKAFGVRV 80

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D+SS     +   +   +  ++++L+NNAG    G    + ++  +   + N  G FL +
Sbjct: 81  DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCS 140

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             ++  M++      G G IIN +S
Sbjct: 141 KYVIPVMRRN-----GGGSIINTTS 160

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 89.6 bits (223), Expect = 9e-22
 Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 10/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A++TGA SGIG  TA  LA  GV V    R     ++V + IV      +  A+E 
Sbjct: 27  PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEA 84

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           D+S    +RN   +  ++   L+I++ NAGI G   P   L     +   A N  G FL 
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLT 144

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
            +L +  +K+      G G I+ VSS
Sbjct: 145 LHLTVPYLKQR-----GGGAIVVVSS 165

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 88.7 bits (221), Expect = 1e-21
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A++TG  +GIG   A   A+ G  +   + D+    + +  I       +V  ++ 
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAVEGADIA--IADLVPAPEAEAAIRNL--GRRVLTVKC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S    V  F  +      + +IL+NNAGI    PF  L+ +  +  F  N    FL+ 
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              +  MK+      G GRIIN++S
Sbjct: 122 KAFVPGMKR-----NGWGRIINLTS 141

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 88.7 bits (221), Expect = 1e-21
 Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 11/147 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM-- 87
            G   ++TG+++G+G   A   A     VV+  R          ++++EI     +A+  
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE---ANSVLEEIKKVGGEAIAV 62

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
           + D++  + V N       +  +L+++INNAG+        +S  +      TN  G FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
            +   +        ++  +G +IN+SS
Sbjct: 123 GSREAIKYF----VENDIKGTVINMSS 145

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 88.8 bits (221), Expect = 1e-21
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  AIVTG + GIG   AR L   G  V +   D+ A + V   +          A+E+
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEV 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++  ASV     +        ++L  NAG+    P + ++ +  +  F  N  G FL  
Sbjct: 66  DVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLAN 125

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            +           S  +G I+N +S
Sbjct: 126 QIACRHF----LASNTKGVIVNTAS 146

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 88.3 bits (220), Expect = 1e-21
 Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 11/145 (7%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTGA+SG G   A     RG  V          ++   T        KV  +  D++
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVA 62

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG----TPFM-LSKDNIELQFATNHLGHFLLT 147
               V    +    Q   +++L+NNAGI G            +  +   A N  G FL  
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             +L  M        G G I+N++S
Sbjct: 123 RAVLPHMLLQ-----GAGVIVNIAS 142

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 87.9 bits (219), Expect = 1e-21
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 18/145 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   I+T A  GIG   A   A  G  V+    + +  +++++          +    L
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVL 57

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++    +  FA+E      +L++L N AG +  GT     + + +     N    +L+ 
Sbjct: 58  DVTKKKQIDQFANEVE----RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  M          G IIN+SS
Sbjct: 114 KAFLPKMLAQ-----KSGNIINMSS 133

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 88.4 bits (220), Expect = 2e-21
 Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 14/142 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A++TGATSGIG   A+     G  V +  R            + EI       ++ D +
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA----IAEIG-GGAVGIQADSA 85

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 150
           +LA +     +   +  ++++L  NAG     P   ++++  +  F  N  G        
Sbjct: 86  NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLF----- 140

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
             T++K          ++   S
Sbjct: 141 --TVQKALPLLARGSSVVLTGS 160

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 88.0 bits (219), Expect = 2e-21
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 12/147 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G + +VTG T GIG   A V A  G +V +  R  A        + +     KV  ++ 
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQT 67

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFL 145
           D+S  A     A     +   ++++  NAG+   P       + + +   FA N  G F 
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGV--FPDAPLATMTPEQLNGIFAVNVNGTFY 125

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
                LD +   +      GR++  SS
Sbjct: 126 AVQACLDALIA-SGS----GRVVLTSS 147

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 88.4 bits (220), Expect = 2e-21
 Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 10/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG + GIG      LA  G  V    R+     +  E   ++     V+    
Sbjct: 20  KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 77

Query: 90  DLSSLASVRN-FASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLL 146
           DL S         +  ++   +LNIL+NNAG+ +       ++ +  +   TN    + L
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 137

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           + +    +K         G +I +SS
Sbjct: 138 SQIAYPLLKA-----SQNGNVIFLSS 158

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 88.4 bits (220), Expect = 2e-21
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 14/170 (8%)

Query: 9   KGPSGFSASSTAEEVTDGI--DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA 66
           +GP       +AE     +  D S  + +VTG T GIG   A V A  G +V +  R   
Sbjct: 17  QGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR 76

Query: 67  AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM 126
               V   +  E+ +  V  + LD+S   S  + A         L+++  NAGI   P  
Sbjct: 77  ELSSVTAEL-GELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI--FPEA 133

Query: 127 L----SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
                + + +      N  G        L  +   + +    GR+I  SS
Sbjct: 134 RLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA-SGR----GRVILTSS 178

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 88.5 bits (220), Expect = 2e-21
 Identities = 41/145 (28%), Positives = 57/145 (39%), Gaps = 7/145 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              TA VTG +SGIG   AR LA RG+ V    RD        + +        VD    
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSC 80

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++S   V    +    +   + IL+N+AG  G      L          TN  G F +T
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVT 140

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             +L             GRI+N++S
Sbjct: 141 REVLRAGGMREAGW---GRIVNIAS 162

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 87.9 bits (219), Expect = 2e-21
 Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 12/145 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG T I+TG   G+G E AR     G  VV+       G        +E+         L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT----ARELG-DAARYQHL 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++     +   +    +   ++ L+NNAGI         S +        N  G F+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             ++  MK       G G I+N+SS
Sbjct: 119 KTVIPAMKDA-----GGGSIVNISS 138

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 87.6 bits (218), Expect = 2e-21
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 16/150 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
                IVTG+  GIG   A  LA  G  VV+   +  A + V     K+I +      ++
Sbjct: 8   ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAV----AKQIVADGGTAISV 63

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG----TPFM-LSKDNIELQFATNHLG 142
            +D+S   S +  A     +   ++ L+NNA I G       + +  +  +   + N  G
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDG 123

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
               T  +   M K      G G I+N SS
Sbjct: 124 ALWCTRAVYKKMTKR-----GGGAIVNQSS 148

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 87.6 bits (218), Expect = 3e-21
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 14/145 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AIV G T G+G  T R L   G  V++  R+ +    ++E         +V A+  
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRS 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++ L  +    +        +++L  NAG+    PF  +S+ + + QFA N  G F   
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             L   +++        G I+  SS
Sbjct: 122 QRLTPLIRE-------GGSIVFTSS 139

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 87.6 bits (218), Expect = 3e-21
 Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 12/145 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+V+G   G+G    R +   G  VV G      GK +      E+       + L
Sbjct: 6   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM----AAELA-DAARYVHL 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           D++  A  +            L++L+NNAGI+    +   +    +     N  G FL  
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             ++  MK+      G G IIN+SS
Sbjct: 121 RAVVKPMKEA-----GRGSIINISS 140

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 87.2 bits (217), Expect = 4e-21
 Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
            A+VTG++ G+G   A  LA  G ++V+   R   A  +  E I K     KV  ++ ++
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANV 63

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNL 149
              A ++    + +    +L++ +NNA      P M L + + +     N          
Sbjct: 64  GQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQE 123

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
               M+K      G G I+++SS
Sbjct: 124 AAKLMEK-----NGGGHIVSISS 141

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 87.2 bits (217), Expect = 4e-21
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 13/144 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S    ++TGA+  +G   A  L   G  V++  R   A        V E+  A   A+  
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS-------VTELRQAGAVALYG 78

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTN 148
           D S    +  F      Q   L  +++NA            DN    F+ + L  +L+  
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINL 138

Query: 149 LLLDTMKKTARKSGGEGRIINVSS 172
                +            I+++S 
Sbjct: 139 HCEPLLTA-----SEVADIVHISD 157

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 87.2 bits (217), Expect = 4e-21
 Identities = 36/146 (24%), Positives = 52/146 (35%), Gaps = 11/146 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAME 88
            G  AI+TG T GIG   A      G  V++  R    G+       K +    ++   +
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKA----AKSVGTPDQIQFFQ 60

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLL 146
            D S                  ++ L+NNAGI    +    +        A N  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T L +  M    +  G    IIN+SS
Sbjct: 121 TRLGIQRM----KNKGLGASIINMSS 142

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 88.7 bits (220), Expect = 4e-21
 Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 12/168 (7%)

Query: 12  SGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV 71
            G      +  + +    +G T  +TGA+ GIG   A   A  G ++V+  +       +
Sbjct: 26  GGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKL 85

Query: 72  KETI---VKEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPF 125
             TI    +EI +   K     +D+     +     +   +   ++IL+NNA  +  T  
Sbjct: 86  LGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNT 145

Query: 126 M-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           +      ++L    N  G +L +   +  +KK          I+N+S 
Sbjct: 146 LDTPTKRLDLMMNVNTRGTYLASKACIPYLKK-----SKVAHILNISP 188

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 86.9 bits (216), Expect = 5e-21
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 10/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA   IG  TA  LA  G  + +   +  A +  + ++ ++    +  +   
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLL 146
           D++S  +V            +++ L NNAG  G   P      D+       N  G F +
Sbjct: 64  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
              +   M          GRI+N +S
Sbjct: 124 LKAVSRQMITQ-----NYGRIVNTAS 144

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 87.2 bits (217), Expect = 5e-21
 Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 16/170 (9%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGL----TAIVTGAT-SGIGTETARVLALRGVHVVMGVRD 64
           GP   + S   +E+    DG GL      +VT A  +GIG+ TAR   L G  VV+    
Sbjct: 1   GPGSMNLSEAPKEI----DGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56

Query: 65  IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-T 123
                + ++ +  ++   +V+A+  D++S  +V    ++   +  +L++L+NNAG+ G T
Sbjct: 57  ERRLGETRDQL-ADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT 115

Query: 124 PFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           P + ++ +  +             T   L       R     G I+N +S
Sbjct: 116 PVVDMTDEEWDRVLNVTLTSVMRATRAALRYF----RGVDHGGVIVNNAS 161

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 86.4 bits (215), Expect = 6e-21
 Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 22/145 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    +VTG + GIG     +L     H V+ +            I +   +  +  ++ 
Sbjct: 3   AMANYLVTGGSKGIGKAVVELLLQNKNHTVINID-----------IQQSFSAENLKFIKA 51

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           DL+    + N      I++   + +  NAGI+       +  ++I+     N        
Sbjct: 52  DLTKQQDITNVLDI--IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             L + +K           I+   S
Sbjct: 110 KGLENNLKV-------GASIVFNGS 127

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 86.9 bits (216), Expect = 7e-21
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 7/145 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VTGATSGIG E AR L   G+ V +  R     +   + + +     + D    
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTC 78

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+ S+  +    +    ++  +++L+NNAG   G     L+ +       TN  G F +T
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 138

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             +L       R +   GRI+N++S
Sbjct: 139 KQVLKAGGMLERGT---GRIVNIAS 160

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 86.8 bits (216), Expect = 8e-21
 Identities = 39/149 (26%), Positives = 56/149 (37%), Gaps = 10/149 (6%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTGA+SGIG   A + A  G  VV+  R+  A  ++ + I       +  A+  D+ 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVG 67

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTNL 149
             A           +   L+   NNAG +G       LS +       TN    FL    
Sbjct: 68  DEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKY 127

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLA 178
            +  +       GG G +   SS     A
Sbjct: 128 QVPAI----AALGG-GSLTFTSSFVGHTA 151

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 86.1 bits (214), Expect = 1e-20
 Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 10/148 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
                +VTG + GIG    R+ A +G  V +     AA ++  + +V  I  +  +  A+
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVN---YAANREAADAVVAAITESGGEAVAI 81

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
             D+ + A +    S  + Q  +L+ L+NNAGI+        +S + IE     N  G  
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSI 141

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L     +  M +    SG  G I+NVSS
Sbjct: 142 LCAAEAVRRMSR--LYSGQGGAIVNVSS 167

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 85.7 bits (213), Expect = 2e-20
 Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 18/150 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A++TG  SG+G          G  V +  +     +++               +  
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLREL----EVAHG-GNAVGVVG 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTP---FMLSKDNIELQF----ATNHLG 142
           D+ SL   +  A        +++ LI NAGI         L +D I+  F      N  G
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           +       L  +          G ++   S
Sbjct: 119 YIHAVKACLPALVS------SRGSVVFTIS 142

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 85.3 bits (212), Expect = 3e-20
 Identities = 34/145 (23%), Positives = 50/145 (34%), Gaps = 20/145 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA  GIG      L   G  V +  R +A               A    +  
Sbjct: 27  EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPG 73

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           DL   A              +L+I++NNAG++        +  +  L    N    F + 
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRIC 133

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              +  M        G G I+NV+S
Sbjct: 134 RAAIPLMAAA-----GGGAIVNVAS 153

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 85.3 bits (212), Expect = 3e-20
 Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  AIVTGA +GIG   AR LA  G HV+    D  A          +I      A  +
Sbjct: 28  AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA----ATKIG-CGAAACRV 82

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S    +             ++ L+ NAG++     +  + ++ +   A N  G +L T
Sbjct: 83  DVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCT 142

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
                 M     + GG G I+N+SS
Sbjct: 143 KHAAPRM----IERGG-GAIVNLSS 162

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 85.8 bits (213), Expect = 3e-20
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 10/152 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDA 86
            G  AIVTG  +GIG    + L   G +VV+  R +   K   + +   +P     +V  
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHF 144
           ++ ++ +   V N          ++N L+NN G    +P   +S         TN  G F
Sbjct: 77  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 136

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
            +   +  +  K        G I+N+      
Sbjct: 137 YMCKAVYSSWMK-----EHGGSIVNIIVPTKA 163

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 84.8 bits (211), Expect = 3e-20
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 10/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG + GIG      LA  G  V    R+     D       +    KV+A   
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 65

Query: 90  DLSSLASVRNFASEYNIQHH-QLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLL 146
           DLSS +  +   +      H +LNIL+NNAGI +       + ++  L  + N    + L
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 125

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           + L    +K         G ++ +SS
Sbjct: 126 SVLAHPFLKA-----SERGNVVFISS 146

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 84.9 bits (211), Expect = 3e-20
 Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 10/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               AIVTG    IG      LA  G  V++   D A      E +  E     V ++ +
Sbjct: 12  DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVM 69

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFM-LSKDNIELQFATNHLGHFLL 146
           D+++  SV+N     + Q  +++IL+  AGI         ++      Q   N  G F  
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRS 129

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
              +   M +       +G I+ + S
Sbjct: 130 CQAVGRIMLE-----QKQGVIVAIGS 150

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 84.9 bits (211), Expect = 3e-20
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 19/142 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            AIVTG +SGIG      L   G  VV    D  +  +V             D  ++D++
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV------------SDHFKIDVT 63

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLTNLL 150
           +   V+    +   ++ +++IL+NNAGI   +P      +        N  G +L+    
Sbjct: 64  NEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYT 123

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           +  M        G G IIN++S
Sbjct: 124 IPVMLAI-----GHGSIINIAS 140

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 84.5 bits (210), Expect = 4e-20
 Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 24/155 (15%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI--AAGKDVKETIVKEIPSA--KVD 85
            G  A+VTGA+ GIG   A+ LA  G  V      I     K+  E  V EI S      
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVA-----IHYGNRKEEAEETVYEIQSNGGSAF 60

Query: 86  AMELDLSSLASVRNFASE------YNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFA 137
           ++  +L SL  V    S             + +ILINNAGI         ++   +   +
Sbjct: 61  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVS 120

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N    F +    L  ++          RIIN+SS
Sbjct: 121 VNAKAPFFIIQQALSRLRD-------NSRIINISS 148

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 84.5 bits (210), Expect = 4e-20
 Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 14/147 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +   AIVTGA+ GIG   A  LA  G  VV+     A      E +  +I +A  K    
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINY---AGKAAAAEEVAGKIEAAGGKALTA 82

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
           + D+S  A+VR   +        +++L+NNAGIM  T          +   A N  G F 
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFN 142

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
                   ++         GRIIN+S+
Sbjct: 143 TLREAAQRLRVG-------GRIINMST 162

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 84.5 bits (210), Expect = 4e-20
 Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 26/158 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI-----VKEIPSAKV 84
               A+VTGA SGIG   +  LA  G  V     D AA ++    +      +  P    
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNH 65

Query: 85  DAMELDLSSLASVRNFASEYNIQH-HQLNILINNAGIMGTPFMLSKDNI-----ELQF-- 136
            A + D+S   + R    +         +++++ AGI       ++D       E  +  
Sbjct: 66  AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI-------TQDEFLLHMSEDDWDK 118

Query: 137 --ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             A N  G FL+T      +     +    G IIN+SS
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCR----GSIINISS 152

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 84.5 bits (210), Expect = 5e-20
 Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 14/147 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               AI+TGA  GIG ET+RVLA  G  VV+                  +         +
Sbjct: 10  ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA----AASVG-RGAVHHVV 64

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHFL 145
           DL++  SVR           +L+I+ NNA       ML    + D  +  F  N  G  L
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           +    +  +      +GG G I+N+SS
Sbjct: 125 MCKYAIPRL----ISAGG-GAIVNISS 146

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 84.6 bits (210), Expect = 5e-20
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 13/150 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSA--KVDA 86
           +   AIVTG   GIG   AR LA  G  + + G+ D      V    + E+     +V  
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV----IAELSGLGARVIF 83

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGT---PFM-LSKDNIELQFATNHLG 142
           +  DL+ L+S +        +  +++ L+NNAGI       F+ L  +N +     N  G
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRG 143

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
               T  +L  M  +  ++     IIN++S
Sbjct: 144 TVFFTQAVLKAMLASDARAS--RSIINITS 171

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 84.2 bits (209), Expect = 5e-20
 Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 18/145 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA+ GIG    R    R   VV   R I    D             +  +  
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAG 75

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S   +      E   +  +++ L+NNAG+    PF+ +++++ +     N  G F +T
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHIT 135

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
                 M K      G G I+++++
Sbjct: 136 QRAAAEMLKQ-----GSGHIVSITT 155

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 84.1 bits (209), Expect = 6e-20
 Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              T +VTG T GIG       A  G  +    R+     +      K+    +V     
Sbjct: 13  KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVC 70

Query: 90  DLSSLASVRNFASEYNIQH-HQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLL 146
           D S            +     +L+ILINN G     P +  + ++     +TN    + L
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 130

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           + L    +K       G G II +SS
Sbjct: 131 SQLAHPLLKA-----SGCGNIIFMSS 151

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 83.7 bits (208), Expect = 7e-20
 Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 13/142 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTG  SG+G E  ++L   G  V     + AAG+ +      E+   +   +  D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL----AAEL-GERSMFVRHDVS 62

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           S A      +    +   LN+L+NNAGI   G       ++       N    F+     
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
           +  MK+      G G IIN++S
Sbjct: 123 IAAMKE-----TG-GSIINMAS 138

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 83.7 bits (208), Expect = 7e-20
 Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 12/145 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A VTGA SGIG E  R  A  G  +++  R+ AA         +E+ +A    +  
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA----AQELGAAVAARIVA 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D++   ++   A+E       ++IL+N+AGI      +           A N  G F  +
Sbjct: 66  DVTDAEAMTAAAAEAE-AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWAS 124

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
                 M        G G I+N+ S
Sbjct: 125 RAFGRAMVAR-----GAGAIVNLGS 144

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 83.8 bits (208), Expect = 7e-20
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 14/151 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                IVTGA+SG+G    R+LA  G  V+       AG++       E+  A V     
Sbjct: 6   KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEP----AAEL-GAAVRFRNA 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKD---NIELQFA----TNHLG 142
           D+++ A      +    +   ++ L+N AG      +L +     ++  FA     N +G
Sbjct: 61  DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD-SFARTVAVNLIG 119

Query: 143 HFLLTNLLLDTMKKTARKSGGE-GRIINVSS 172
            F +  L  + M +    + GE G I+N +S
Sbjct: 120 TFNMIRLAAEVMSQGEPDADGERGVIVNTAS 150

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 83.7 bits (208), Expect = 8e-20
 Identities = 31/145 (21%), Positives = 50/145 (34%), Gaps = 15/145 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG   GIG   A+  A  G  V +        +  +               ++
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA--------IGGAFFQV 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           DL        F  E      ++++L+NNA I      + +           N      L+
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            L    M+K      G G I+NV+S
Sbjct: 117 ALAAREMRKV-----GGGAIVNVAS 136

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 84.2 bits (209), Expect = 8e-20
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 12/150 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSA--KV 84
            G T  ++G + GIG   A+ +A  G +V +  +       +  TI    KEI  A  + 
Sbjct: 8   RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA 67

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLG 142
             +  D+    +V    ++   Q   ++I +NNA  +       +     +L       G
Sbjct: 68  LPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRG 127

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            + ++   +  MK           I+ +S 
Sbjct: 128 TYAVSQSCIPHMKG-----RDNPHILTLSP 152

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 83.8 bits (208), Expect = 8e-20
 Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 20/145 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                IVTGA+ GIG   A      G  V+                      AK D +E 
Sbjct: 7   RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE-------------AKYDHIEC 53

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+++   V+        ++  +++L+NNAGI        +S          N  G++  +
Sbjct: 54  DVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              +  M ++      +  I+N+SS
Sbjct: 114 KFAIPYMIRS-----RDPSIVNISS 133

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 83.7 bits (208), Expect = 8e-20
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           S   A VTG   GIGT   + L   G  VV G          +   +++  +      A 
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC---GPNSPRRVKWLEDQKALGFDFYAS 68

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
           E ++    S +    +   +  ++++L+NNAGI       ++D +        +     T
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI-------TRDVVFRKMTREDWQAVIDT 121

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           N    F +T  ++D M +        GRIIN+SS
Sbjct: 122 NLTSLFNVTKQVIDGMVE-RGW----GRIINISS 150

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 83.8 bits (208), Expect = 9e-20
 Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 16/167 (9%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK 69
            PS    SS   + +  + G    A+ TGA  GIG   A  L  RG  VV+      +  
Sbjct: 2   APSADITSSGPSDASKPLAGK--VALTTGAGRGIGRGIAIELGRRGASVVVNY---GSSS 56

Query: 70  DVKETIVKEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM 126
              E +V E+     +  A++ D+S  + V     +       L+ +++N+G+      +
Sbjct: 57  KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL 116

Query: 127 -LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            ++++  +  F  N  G F +    L   ++        GRII  SS
Sbjct: 117 EVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-------GRIILTSS 156

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 82.9 bits (206), Expect = 1e-19
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 23/155 (14%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           +  +   A+VTGA+ GIG E A  LA +G  VV      A+ +  + ++ ++    K   
Sbjct: 1   MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARG 58

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FA 137
           + L++S + S++NF +E   ++  ++IL+NNAGI       ++DN+ ++           
Sbjct: 59  LVLNISDIESIQNFFAEIKAENLAIDILVNNAGI-------TRDNLMMRMSEDEWQSVIN 111

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           TN    F ++   +  M K  R     GRII++ S
Sbjct: 112 TNLSSIFRMSKECVRGMMK-KRW----GRIISIGS 141

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 83.3 bits (207), Expect = 1e-19
 Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG + G+G   A+ LA  G  VV+  R++    +  + + ++    +  A   
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRC 78

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S+   V+        +  +L+ ++N AGI    P      D        N  G + + 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 138

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
                 +++          IIN+ S
Sbjct: 139 REAFSLLRE-----SDNPSIINIGS 158

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 83.4 bits (207), Expect = 1e-19
 Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG  A++TGA++GIG + A   A  G  V +  R   A + V + I       K   +  
Sbjct: 31  SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRC 88

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D++    VR    +   +   ++I + NAGI      + +  +  +    TN  G FL  
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTA 148

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
                 M       G  G II  +S
Sbjct: 149 QAAARAM----VDQGLGGTIITTAS 169

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 82.5 bits (205), Expect = 2e-19
 Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 26/154 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A+VTGA+ GIG   A  LA +G +VV+     A  +     +V EI        A+
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNY---AGNEQKANEVVDEIKKLGSDAIAV 59

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
             D+++   V N   +      Q++IL+NNAG+       +KDN+     E ++     T
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV-------TKDNLLMRMKEEEWDTVINT 112

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           N  G FL T  +   M +  R     GRI+N++S
Sbjct: 113 NLKGVFLCTKAVSRFMMR-QRH----GRIVNIAS 141

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 82.6 bits (205), Expect = 2e-19
 Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++ G    +G  TA+  AL  V++V+            +    E+          
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKL-KDELEDQGAKVALY 68

Query: 90  --DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFL 145
             DLS+   V         +  +++I IN  G +   P +  S+   +     N+   + 
Sbjct: 69  QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
                   +K+ A+     G II +++
Sbjct: 129 -------FIKQAAKHMNPNGHIITIAT 148

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 12/150 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI---VKEIPSA--KV 84
           SG T  +TGA+ GIG   A   A  G +V +  +   A   +  TI      + +A  + 
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG 64

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLG 142
            A++ D+     VR   +        ++IL+NNA  +     +       +L    N  G
Sbjct: 65  LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARG 124

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            F+     L  + +          I+ ++ 
Sbjct: 125 SFVCAQACLPHLLQ-----APNPHILTLAP 149

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 82.6 bits (205), Expect = 2e-19
 Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 23/175 (13%)

Query: 7   NRKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA 66
           +     G   + T    +         AIVTGA+ GIG   A  LA RG  V+      A
Sbjct: 4   HHHHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA 63

Query: 67  AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM 126
             + +     +     +     L+++   +V         +   LN+L+NNAGI      
Sbjct: 64  GAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI------ 115

Query: 127 LSKDNI-----ELQF----ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            ++D +     + ++     TN    F L+  +L  M K AR     GRI+N++S
Sbjct: 116 -TQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMK-ARG----GRIVNITS 164

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 82.7 bits (205), Expect = 2e-19
 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 14/152 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            GL A++TG  SG+G  TA  L  +G   V+     + G+       K++          
Sbjct: 11  KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ----AKKL-GNNCVFAPA 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--------MGTPFMLSKDNIELQFATNHL 141
           D++S   V+   +    +  ++++ +N AGI        +      + ++ +     N +
Sbjct: 66  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 125

Query: 142 GHFLLTNLLLDTMKKTARKSGGE-GRIINVSS 172
           G F +  L+   M +     GG+ G IIN +S
Sbjct: 126 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS 157

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 82.6 bits (205), Expect = 2e-19
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 26/154 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +   A VTG   G+G   +R L   G+ V +     +   D   T +     A     A 
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSH---SERNDHVSTWLMHERDAGRDFKAY 80

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
            +D++   S    A +      ++++LINNAGI       ++D       +  +     T
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAGI-------TRDATFMKMTKGDWDAVMRT 133

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           +    F +T   +  M +  R     GRI+N+ S
Sbjct: 134 DLDAMFNVTKQFIAGMVE-RRF----GRIVNIGS 162

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 82.1 bits (204), Expect = 2e-19
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 26/154 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
              +A+VTGA+ GIG   A  LA  G +V +     A  K+  E +V+EI +      A+
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNY---AGSKEKAEAVVEEIKAKGVDSFAI 59

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
           + +++    V+    E   Q   L++L+NNAGI       ++DN+     E ++     T
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGI-------TRDNLLMRMKEQEWDDVIDT 112

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           N  G F         M +  R     G IIN+SS
Sbjct: 113 NLKGVFNCIQKATPQMLR-QRS----GAIINLSS 141

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 11/145 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G TA+VTGA  GIG   A  LA  G  V++   +    K    +I       K  A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S   SV+   +E       ++IL+NNA I+    +  +  D+       N  G F++T
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
               D M+   +     GR+I+++S
Sbjct: 120 RAGTDQMRAAGKA----GRVISIAS 140

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 82.7 bits (205), Expect = 2e-19
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 13/151 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G +AIV+G   G+G  T R L   G+ VV+       GK +      E+   + + +  
Sbjct: 29  EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKAL----ADEL-GNRAEFVST 83

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIEL---QF----ATNHLG 142
           +++S  SV       N        ++ + G      ++ +D        F         G
Sbjct: 84  NVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143

Query: 143 HFLLTNLLLDTMKKTARKSGGE-GRIINVSS 172
            + +  L+  ++     +  GE G ++  +S
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTAS 174

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 82.0 bits (203), Expect = 3e-19
 Identities = 13/159 (8%), Positives = 42/159 (26%), Gaps = 24/159 (15%)

Query: 17  SSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV 76
              +  +           +V G +  +G E  +    +  + +          D      
Sbjct: 8   HHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH----- 62

Query: 77  KEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIE 133
                    +  +  S    +++   + N +  +++  +  AG    G         +++
Sbjct: 63  ---------SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVK 113

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
                N    F   ++    + +        G  +   +
Sbjct: 114 GMIDMNLYSAFASAHIGAKLLNQG-------GLFVLTGA 145

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 81.8 bits (203), Expect = 3e-19
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 26/154 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G TAIVTG++ G+G   A  L   G ++V+     +      +   +E  +A   V   
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTS---LDATAEEFKAAGINVVVA 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
           + D+ +   V N          +++IL+NNAGI       ++D +     E  +     T
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI-------TRDTLMLKMSEKDWDDVLNT 113

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           N    +L T  +   M K  +     G+IIN++S
Sbjct: 114 NLKSAYLCTKAVSKIMLK-QKS----GKIINITS 142

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 81.8 bits (203), Expect = 3e-19
 Identities = 37/145 (25%), Positives = 54/145 (37%), Gaps = 19/145 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG    VTGA  GIG  TA      G  V    +                         +
Sbjct: 6   SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------QYPFATEVM 53

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++  A V         +  +L+ L+N AGI  MG    LSK++ +  FA N  G F L 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLF 113

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              ++  ++        G I+ V+S
Sbjct: 114 QQTMNQFRRQ-----RGGAIVTVAS 133

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 82.2 bits (204), Expect = 3e-19
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 23/151 (15%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
              A+VTGA  GIG E A++LA    HV+   R   +   V + I       +      D
Sbjct: 44  NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGD 101

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHL 141
           +S    +    ++   +H  ++IL+NNAGI       ++DN+       ++     TN  
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGI-------TRDNLFLRMKNDEWEDVLRTNLN 154

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             F +T  +   M    R     GRIIN+SS
Sbjct: 155 SLFYITQPISKRMIN-NRY----GRIINISS 180

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 82.2 bits (204), Expect = 4e-19
 Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 14/168 (8%)

Query: 15  SASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET 74
           + +   + +   I  +G TA VTG + GIG   A+ LAL G  V +         +  + 
Sbjct: 15  TENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVAL---TYVNAAERAQA 71

Query: 75  IVKEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKD 130
           +V EI  A  +  A+  D     ++     E       L+IL+N+AGI    P    +  
Sbjct: 72  VVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVA 131

Query: 131 NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA 178
           + +   A N    F+        +          GRII + S    L 
Sbjct: 132 DFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLAELV 172

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 81.9 bits (203), Expect = 4e-19
 Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +G   +VTGA+ GIG   A  L   G  V +  R +   + V     +E  S   +   +
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVV----AQEAQSLGGQCVPV 59

Query: 88  ELDLSSLASVRNFASEYNIQHH-QLNILINNAGIM--------GTPFM-LSKDNIELQFA 137
             D S  + VR+   + + +   +L++L+NNA              F        +    
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
               GH+  +      M        G+G I+ +SS
Sbjct: 120 VGLRGHYFCSVYGARLMVP-----AGQGLIVVISS 149

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 81.4 bits (202), Expect = 4e-19
 Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 28/152 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA  GIG  T  + A  G  +V    +    ++  E +           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           D++  ASV    +E      +L+ +++ AGI       ++DN         +      N 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNL 109

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            G FL+     + M++        G I+  +S
Sbjct: 110 TGSFLVAKAASEAMRE-KNP----GSIVLTAS 136

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 81.4 bits (202), Expect = 4e-19
 Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 26/151 (17%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELD 90
             +VTGA+ GIG   A  L   G  V++     A      E + K+I +   +      D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNY---ARSAKAAEEVSKQIEAYGGQAITFGGD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNHL 141
           +S  A V             +++++NNAGI       ++D +     + Q+      N  
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGI-------TRDTLLIRMKKSQWDEVIDLNLT 112

Query: 142 GHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           G FL T      M K  RK    GRIIN++S
Sbjct: 113 GVFLCTQAATKIMMK-KRK----GRIINIAS 138

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 81.8 bits (203), Expect = 4e-19
 Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 8/145 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                I+TG +SG+G   A   A  G  VV+  R     ++ K  I +     ++  +++
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQM 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+ +   ++    + + +  +++ILINNA      P   LS +           G F  +
Sbjct: 63  DVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCS 122

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             +     +   K    G IIN+ +
Sbjct: 123 QAIGKYWIEKGIK----GNIINMVA 143

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 81.9 bits (203), Expect = 4e-19
 Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 8/145 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A +TG  SGIG   A +    G H V+  R +         +       +   + +
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSM 84

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+ +  +V     +   +  +++ILIN A      P   LS +  +     +  G F ++
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVS 144

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            +L +   +        G I+N+++
Sbjct: 145 RVLYEKFFR-----DHGGVIVNITA 164

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 81.9 bits (203), Expect = 4e-19
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 23/163 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDA 86
               A++TG    IG   A  L  +G  VV+  R         + +V E+ +A       
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA---AQRLVAELNAARAGSAVL 66

Query: 87  MELDLSSLASVRNFAS---EYNIQHH-QLNILINNAGIMG-TPFMLSKDNIEL------- 134
            + DLS  +S+ +      + + +   + ++L+NNA     TP +   D           
Sbjct: 67  CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126

Query: 135 -----QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
                 F +N +    L         +          ++N+  
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 81.4 bits (202), Expect = 4e-19
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 28/155 (18%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDA 86
            G  ++VTG+T GIG   A  LA  G  V++         +  + + +EI +    K   
Sbjct: 6   QGKVSLVTGSTRGIGRAIAEKLASAGSTVII----TGTSGERAKAVAEEIANKYGVKAHG 61

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----A 137
           +E++L S  S+     E       ++IL+NNAGI       ++D +      L +     
Sbjct: 62  VEMNLLSEESINKAFEEIYNLVDGIDILVNNAGI-------TRDKLFLRMSLLDWEEVLK 114

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N  G FL+T   L  M K  R     GRI+N+SS
Sbjct: 115 VNLTGTFLVTQNSLRKMIK-QRW----GRIVNISS 144

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 81.4 bits (202), Expect = 5e-19
 Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 24/145 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                +V  A+ GIG   A VL+  G  V +  R+    K      V             
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 65

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
                  +R        +  +++IL+ NAG      F  L+ ++ +    +  L    + 
Sbjct: 66  -----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  MK+  +     GRI+ ++S
Sbjct: 121 RNYLPAMKE--KGW---GRIVAITS 140

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 81.4 bits (202), Expect = 5e-19
 Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 14/145 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG T +VTGA SGIG     + A  G  +V   R+     +    +      A+  A+  
Sbjct: 5   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S   +V    +E   +  +L+ + + AG+        L  +  E     N  G FL+ 
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
               + +++        G ++   S
Sbjct: 120 RKAGEVLEEG-------GSLVLTGS 137

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 81.4 bits (202), Expect = 5e-19
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA+ GIG   A +LA RG  V+      +  + + + +           M L
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMAL 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           ++++  S+         +   ++IL+NNAGI       ++DN+     E ++     TN 
Sbjct: 63  NVTNPESIEAVLKAITDEFGGVDILVNNAGI-------TRDNLLMRMKEEEWSDIMETNL 115

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
              F L+  +L  M K  R+    GRIINV S
Sbjct: 116 TSIFRLSKAVLRGMMK-KRQ----GRIINVGS 142

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 81.5 bits (202), Expect = 5e-19
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 26/154 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +   A+VTGA+ GIG   A  LA  G  V +     A+     + +V  I +A  +  A+
Sbjct: 27  TDRIALVTGASRGIGRAIALELAAAGAKVAVNY---ASSAGAADEVVAAIAAAGGEAFAV 83

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----AT 138
           + D+S  + V    +    +  +L++L+NNAGI       ++D +        +      
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGI-------TRDTLLLRMKRDDWQSVLDL 136

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           N  G FL +      M K  R     GRIIN++S
Sbjct: 137 NLGGVFLCSRAAAKIMLK-QRS----GRIINIAS 165

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 81.5 bits (202), Expect = 6e-19
 Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 16/168 (9%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAG 68
                  +             G  A+VTGA  GIG E A  L  RG  V++       + 
Sbjct: 8   RGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESA 67

Query: 69  KDVKETIVKEIPSAKVDAMEL--DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPF 125
           ++V    V  I     DA  +  ++  +  +     E      +L+I+ +N+G++     
Sbjct: 68  EEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHV 123

Query: 126 M-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             ++ +  +  F  N  G F +       ++         GR+I + S
Sbjct: 124 KDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGS 164

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 81.0 bits (201), Expect = 7e-19
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 27/152 (17%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM---EL 89
            A++TGA+ GIG   A  LA  G  + +        ++  E + +E        +     
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHY---GQNREKAEEVAEEARRRGSPLVAVLGA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           +L    +      +       L+ L+NNAGI       ++D +     +  +      N 
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGI-------TRDTLLVRMKDEDWEAVLEANL 112

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
              F  T   +  M K AR     GRI+N++S
Sbjct: 113 SAVFRTTREAVKLMMK-ARF----GRIVNITS 139

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 81.0 bits (201), Expect = 8e-19
 Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 15/148 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +  T +V GA   IG   A   A  G +VV  +    A +      V EI        A+
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQEGANVV--LTYNGAAEGAATA-VAEIEKLGRSALAI 63

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHF 144
           + DL++ A V    S    +  +++ L++ AG +        + +         N    F
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
           L     L  M K        G I+  SS
Sbjct: 124 LTAKTALPKMAKG-------GAIVTFSS 144

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 80.6 bits (200), Expect = 9e-19
 Identities = 24/145 (16%), Positives = 42/145 (28%), Gaps = 18/145 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VT A    G      L   G  VV      A      E    E  +    A+     
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADA---AERQRFESENPGTIAL----- 54

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFML-----SKDNIELQFATNHLGHFLLT 147
           +                 ++ +++N  I      L     S+ +I   F    +   LL 
Sbjct: 55  AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              +  ++       G   +I ++S
Sbjct: 115 QSAIAPLRA-----AGGASVIFITS 134

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 82.7 bits (205), Expect = 9e-19
 Identities = 42/153 (27%), Positives = 62/153 (40%), Gaps = 27/153 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA  GIG   A V A  G  VV             E + +        A+ L
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATVV-----AIDVDGAAEDLKRVADKVGGTALTL 266

Query: 90  DLSSLASVRNFASEYNIQH-HQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATN 139
           D+++  +V    +     H  +++IL+NNAGI  T     +D +     E ++    A N
Sbjct: 267 DVTADDAVDKITAHVTEHHGGKVDILVNNAGI--T-----RDKLLANMDEKRWDAVIAVN 319

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            L    LT  L+             GR+I +SS
Sbjct: 320 LLAPQRLTEGLVGNGTI-GEG----GRVIGLSS 347

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 81.1 bits (201), Expect = 1e-18
 Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 20/148 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDL 91
            AI+TG   GIG  TA++    G  VV+       G+ V       I     +  +  D+
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV----CNNIGSPDVISFVHCDV 73

Query: 92  SSLASVRNFASEYNIQHH-QLNILINNAGIMGTPFM----LSKDNIELQFATNHLGHFLL 146
           +    VRN   +  I  H +L+I+  N G++ T          ++ +     N  G FL 
Sbjct: 74  TKDEDVRN-LVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL- 131

Query: 147 TNLLLDTMKKTAR--KSGGEGRIINVSS 172
                   K  AR      +G I+  +S
Sbjct: 132 ------VAKHAARVMIPAKKGSIVFTAS 153

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 80.3 bits (199), Expect = 1e-18
 Identities = 31/143 (21%), Positives = 49/143 (34%), Gaps = 16/143 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TAIVT      G  +A  L+  G  V           D       E+ +      +L   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVA--------CHDESFKQKDELEAFAETYPQLKPM 54

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFM-LSKDNIELQFATNHLGHFLLTNL 149
           S              + Q+++L++N        P    + ++         +  F L N 
Sbjct: 55  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 114

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
           +   MKK  RKS   G II ++S
Sbjct: 115 VASQMKK--RKS---GHIIFITS 132

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 80.2 bits (199), Expect = 1e-18
 Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 30/155 (19%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           ID +G T+++TGA+SGIG+  AR+L   G  V++      + ++  +++   +       
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVII----SGSNEEKLKSLGNAL-KDNYTI 64

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FA 137
              +L++     N  S+ +     L+IL+ NAGI       + D + ++           
Sbjct: 65  EVCNLANKEECSNLISKTS----NLDILVCNAGI-------TSDTLAIRMKDQDFDKVID 113

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N   +F+L    +  M +  R     GRIIN+SS
Sbjct: 114 INLKANFILNREAIKKMIQ-KRY----GRIINISS 143

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 80.3 bits (199), Expect = 2e-18
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 26/155 (16%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
              +G  A+VTGAT GIG   AR    +G  V +        K++   +        V  
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFV 77

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ---------FA 137
              +LS   S++  A     +   ++IL+NNAGI       ++D + ++          A
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGI-------TRDGLFVRMQDQDWDDVLA 130

Query: 138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            N      LT  L+ +M +  R     GRIIN++S
Sbjct: 131 VNLTAASTLTRELIHSMMR-RRY----GRIINITS 160

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 79.9 bits (198), Expect = 2e-18
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 7/145 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              T IVTG   GIG    R +A  G +V +  R  A   +V E + KE    K  A + 
Sbjct: 13  VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQC 71

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S+   V     + +     ++ LI NAG+ +  P   L+ ++    +  N  G F   
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 131

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             +     +  +K    G I+  SS
Sbjct: 132 RAVAKLWLQKQQK----GSIVVTSS 152

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 79.9 bits (198), Expect = 2e-18
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 16/148 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAME 88
            G  A+VTG+  GIG   A  L   G  VV+         + V    V EI +   DA+ 
Sbjct: 17  DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKV----VSEIKALGSDAIA 72

Query: 89  L--DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHF 144
           +  D+  +  +     +       L+I ++N+G++       ++++  +  F+ N  G F
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQF 132

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSS 172
            +       + +        GRI+  SS
Sbjct: 133 FVAREAYRHLTE-------GGRIVLTSS 153

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 80.4 bits (199), Expect = 2e-18
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             +VTGA+SG G   A      G  V+   R   A  D+           + +A+ LD++
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVT 61

Query: 93  SLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
               +   A++   ++ ++++L+NNAG   +G     ++  +   F  +  G   LT  L
Sbjct: 62  DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL 121

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLAY 179
           L  M+   R S   G ++N+SS G +L++
Sbjct: 122 LPQMR--ERGS---GSVVNISSFGGQLSF 145

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 80.3 bits (199), Expect = 3e-18
 Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 7/145 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A +TG  +G+G     +L+  G   V+  R +   K   E I  +    KV A++ 
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQC 83

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+     V+N  SE        NI+INNA     +P   LS +  +        G   +T
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
             +   +     K+      +++++
Sbjct: 144 LEIGKQL----IKAQKGAAFLSITT 164

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 79.9 bits (198), Expect = 3e-18
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 15/160 (9%)

Query: 17  SSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV 76
           +   + +T     +G TA+VTGA SGIG   A   A  G HV+   R         + + 
Sbjct: 17  NLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-----KEVA 71

Query: 77  KEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNI 132
            EI       +A+  DL+ L    N A E      ++++L+NNAGI    P   +S    
Sbjct: 72  DEIADGGGSAEAVVADLADLEGAANVAEELA-ATRRVDVLVNNAGIIARAPAEEVSLGRW 130

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
                 N    ++L+      M        G GRI+ ++S
Sbjct: 131 REVLTVNLDAAWVLSRSFGTAMLA-----HGSGRIVTIAS 165

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 78.8 bits (195), Expect = 7e-18
 Identities = 41/181 (22%), Positives = 62/181 (34%), Gaps = 19/181 (10%)

Query: 10  GPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAG 68
           G S      ++  V  G       A+VTGA   IG   A  L   G  VV+       A 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA 61

Query: 69  KDVKETIVKEIPSAKVDAMELDLSS----LASVRNFASEYNIQHHQLNILINNAGIM-GT 123
             + + + KE         + DL++     AS     +       + ++L+NNA     T
Sbjct: 62  VSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT 120

Query: 124 PF--MLSKDNIELQ---------FATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVS 171
           P      +DN   +           TN +  FLLT       K T    +     I+N+ 
Sbjct: 121 PLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180

Query: 172 S 172
            
Sbjct: 181 D 181

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 78.5 bits (194), Expect = 7e-18
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 30/141 (21%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             +++G  +GIG  T +VL   G  +V        G D+++        A+V A   DLS
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIV--------GIDIRD--------AEVIA---DLS 43

Query: 93  SLASVRNFASEYNIQHH-QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLL 151
           +    +   ++   +    ++ L+  AG+           +    + N+ G   L +  L
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMDAFL 98

Query: 152 DTMKKTARKSGGEGRIINVSS 172
             +KK     G +   + +SS
Sbjct: 99  PALKK-----GHQPAAVVISS 114

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 77.6 bits (192), Expect = 1e-17
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 22/153 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAME 88
               A++T  T G+G +    L  +G  V +    D  A + +KET        ++  ++
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQFVQ 63

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATN 139
            D++    +     E      +++ LINNAG         +        E ++      N
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVF-----ERKKLVDYEEDEWNEMIQGN 118

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
               F L  L++  M+K        GRIIN   
Sbjct: 119 LTAVFHLLKLVVPVMRK-QNF----GRIINYGF 146

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 11/147 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A VTG++ GIG   A   A  G  V +      A +  +             A + 
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKC 90

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFMLSKDNIEL---QFATNHLGHFL 145
           ++S   SV    S+       +++ + NAG+       +  DN +      + +  G + 
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
            ++ +    KK      G+G +I  SS
Sbjct: 151 CSHNIGKIFKKN-----GKGSLIITSS 172

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 18/152 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A+VTG  SG+G  T + L   G  VV  V DI       E +V ++   +      
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLDAGAQVV--VLDIRG-----EDVVADL-GDRARFAAA 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI--ELQFA----TNHLGH 143
           D++  A+V + A +       L I++N AG      +LS+D +     F      N +G 
Sbjct: 60  DVTDEAAVAS-ALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118

Query: 144 FLLTNLLLDTMKKT---ARKSGGEGRIINVSS 172
           F +  L  + + KT      +   G IIN +S
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTAS 150

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 75.0 bits (185), Expect = 1e-16
 Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 22/147 (14%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           +A+VTG  SG+G   A  L  RG  VV+         D++           +  +E D++
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVL--------DLRRE------GEDLIYVEGDVT 49

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN------IELQFATNHLGHFLL 146
               VR  A     +   L  +++ AG+     +L K+              N LG F +
Sbjct: 50  REEDVRR-AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108

Query: 147 TNLLLDTMKKTARKSGGE-GRIINVSS 172
             L    M++    + G+ G I+N +S
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTAS 135

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 74.5 bits (184), Expect = 2e-16
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 34/152 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              + +VTG   GIG   AR  A  G  V +             T     P     A++ 
Sbjct: 20  MSRSVLVTGGNRGIGLAIARAFADAGDKVAI-------------TYRSGEPPEGFLAVKC 66

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           D++    V     E    H  + +LI NAG+       +KD +     E  F     TN 
Sbjct: 67  DITDTEQVEQAYKEIEETHGPVEVLIANAGV-------TKDQLLMRMSEEDFTSVVETNL 119

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            G F +       M + A+K    GR++ +SS
Sbjct: 120 TGTFRVVKRANRAMLR-AKK----GRVVLISS 146

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 74.1 bits (183), Expect = 2e-16
 Identities = 32/152 (21%), Positives = 56/152 (36%), Gaps = 34/152 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              + +VTG   GIG   A+ LA  G  V +  R   A                +  +E+
Sbjct: 14  VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEV 60

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNI-----ELQF----ATNH 140
           D++   +V    +        + +L++NAG+       S D       E +F      N 
Sbjct: 61  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL-------SADAFLMRMTEEKFEKVINANL 113

Query: 141 LGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            G F +      +M++  +     GR+I + S
Sbjct: 114 TGAFRVAQRASRSMQR-NKF----GRMIFIGS 140

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 74.3 bits (183), Expect = 3e-16
 Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 40/180 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDA 86
           +   A+VTGA   +G   A  L   G  V +     AA       +   + +        
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE---ANALSATLNARRPNSAIT 64

Query: 87  MELDLSSLASVRNFASEYNIQHH-----------------QLNILINNAGIMG-TPFMLS 128
           ++ DLS++A+     ++ +                     + ++L+NNA     TP + +
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 129 KD---------------NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSS 172
            +                    F +N +  + L       +  T  K  G    IIN+  
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 73.5 bits (181), Expect = 3e-16
 Identities = 14/146 (9%), Positives = 47/146 (32%), Gaps = 20/146 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                +V G    +G+   +    R   V     D+   ++   +++ ++  +  +  + 
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWWVA--SIDVVENEEASASVIVKMTDSFTEQADQ 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPF-MLSKDNIELQFATNHLGHFLL 146
             + +  +            +++ ++  AG    G         N +L +  +     + 
Sbjct: 64  VTAEVGKLLGDQ--------KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           ++L    +K+        G +    +
Sbjct: 116 SHLATKHLKEG-------GLLTLAGA 134

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 72.6 bits (179), Expect = 9e-16
 Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 11/162 (6%)

Query: 16  ASSTAEEVTDGIDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMG-VRDIAAGKDVK 72
            ++  E + D +   G   +VTGA    G+G E AR  A  G  V +         ++  
Sbjct: 5   QATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV 64

Query: 73  ETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKD 130
           + + K     K  A +  + S  S      +      Q++  I NAG    +  +  S +
Sbjct: 65  KELEKTYG-IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVE 123

Query: 131 NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
                   +  G F     +    K+      G G ++  +S
Sbjct: 124 AWNHVVQVDLNGTFHCAKAVGHHFKE-----RGTGSLVITAS 160

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 72.6 bits (179), Expect = 2e-15
 Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 14/147 (9%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAME 88
              A+VTG  SGIG   A   A  G  V +     A  +D ++     I     K   + 
Sbjct: 49  DRKALVTGGDSGIGRAAAIAYAREGADVAINYLP-AEEEDAQQV-KALIEECGRKAVLLP 106

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFL 145
            DLS  +  R+   +       L+IL   AG          L+ +  +  FA N    F 
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           +T   +  + K     G    II  SS
Sbjct: 167 ITQEAIPLLPK-----G--ASIITTSS 186

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 22/146 (15%), Positives = 42/146 (28%), Gaps = 20/146 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S    IV G    +G+         G  V+    D++A       I+ +      +  + 
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVL--NIDLSANDQADSNILVDGNKNWTEQEQS 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPF-MLSKDNIELQFATNHLGHFLL 146
            L   AS    +        Q++ +   AG    G+        N +L    +     + 
Sbjct: 60  ILEQTASSLQGS--------QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
             L    +K         G +    +
Sbjct: 112 AKLATTHLKPG-------GLLQLTGA 130

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 72.5 bits (178), Expect = 2e-15
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 36/178 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAME 88
           +   A+VTGA   +G   A  L   G  V +   R  A    +  T+    P      ++
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQ 103

Query: 89  LDLSSLASVRNFASEYNIQHH-----------------QLNILINNAGIMG-TPFMLSKD 130
            DLS++A+     ++ +                     + ++L+NNA     TP + + +
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163

Query: 131 ---------------NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSS 172
                               F +N +  + L       +  T  K  G    IIN+  
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 72.4 bits (178), Expect = 4e-15
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 19/156 (12%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVV---MGVRDIAAGKDVK--ETIVKEIPS 81
           +D      I+TGA  G+G   +   A  G  VV   +G      G + K  + +V EI  
Sbjct: 4   VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK 63

Query: 82  AKVDAMELDLSSLASVRNFAS--EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIELQF 136
               A+    +   +V +     E  +++   ++++INNAGI+   +   +++ + +L  
Sbjct: 64  NGGVAV----ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVI 119

Query: 137 ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
             +  G F +T       +K        GRI+N SS
Sbjct: 120 DVHLNGAFAVTKAAWPYFQKQ-----KYGRIVNTSS 150

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 58.9 bits (143), Expect = 1e-10
 Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 21/149 (14%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA +G+G E A+  A  G  VV  V D           V EI +A  +A   
Sbjct: 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVV--VNDFKDATKT----VDEIKAAGGEAW-- 372

Query: 90  DLSSLASVRNFAS---EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGH 143
                  V   +    +  I  +  ++IL+NNAGI+   +   +SK   +     + +G 
Sbjct: 373 --PDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGT 430

Query: 144 FLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           F L+ L      +        GRIIN++S
Sbjct: 431 FNLSRLAWPYFVEK-----QFGRIINITS 454

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 70.6 bits (174), Expect = 4e-15
 Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 18/142 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTG + GIG   A  L  RG  V +  R+                S     +  DL 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ----------SLGAVPLPTDLE 53

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI-MGTPFM-LSKDNIELQFATNHLGHFLLTNLL 150
                +            L++L++ A + +  P + LS +        +    FLL    
Sbjct: 54  K-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
              M +      G GR++ + S
Sbjct: 113 APHMAE-----AGWGRVLFIGS 129

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 69.6 bits (171), Expect = 6e-15
 Identities = 17/145 (11%), Positives = 53/145 (36%), Gaps = 33/145 (22%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           + +  ++ GA+  +G+     L  +   V+       AG+                 + +
Sbjct: 2   NAMKILLIGASGTLGSAVKERLE-KKAEVI------TAGR-------------HSGDVTV 41

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLLT 147
           D++++ S++    +      +++ +++  G    +P   L+ +   +  ++   G   L 
Sbjct: 42  DITNIDSIKKMYEQVG----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLV 97

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            L +D++         +G     + 
Sbjct: 98  LLGIDSLND-------KGSFTLTTG 115

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 29/162 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKE 78
            G  A +TGA  G G   A  LA  G  ++    D+               D+ ET V++
Sbjct: 27  EGKVAFITGAARGQGRSHAITLAREGADII--AIDVCKQLDGVKLPMSTPDDLAET-VRQ 83

Query: 79  IPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIE 133
           + +   ++ A ++D+    +++    +   Q  +L+I++ NA +   GT    +      
Sbjct: 84  VEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWR 143

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSS 172
                N  G ++       T +            G I+  SS
Sbjct: 144 DMIDVNLNGAWI-------TARVAIPHIMAGKRGGSIVFTSS 178

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 28/159 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKE 78
           +G  A +TGA  G G   A  LA  G  ++    D+               ++  T VK 
Sbjct: 12  TGKVAFITGAARGQGRAHAVRLAADGADII--AVDLCDQIASVPYPLATPEELAAT-VKL 68

Query: 79  IPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF 136
           +     ++ A + D+    S+         +  +L+I++ NAGI   P     D      
Sbjct: 69  VEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI--APMSAGDDGWHDVI 126

Query: 137 ATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSS 172
             N  G +        T+K       K G  G I+ +SS
Sbjct: 127 DVNLTGVYH-------TIKVAIPTLVKQGTGGSIVLISS 158

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 68.3 bits (168), Expect = 4e-14
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 15/147 (10%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL- 89
           G   ++TG  SGIG   +   A  G ++   +  +    D  ET  + +    V  + L 
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIA--IAYLDEEGDANET-KQYVEKEGVKCVLLP 103

Query: 90  -DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSKDNIELQFATNHLGHFL 145
            DLS     ++   E   Q   LNIL+NN            ++ + +E  F  N   +F 
Sbjct: 104 GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH 163

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           +T   L  +K+          IIN +S
Sbjct: 164 VTKAALSHLKQG-------DVIINTAS 183

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 68.0 bits (167), Expect = 6e-14
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 23/153 (15%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-----------KDVKETIVKEIPS 81
             +VTG   G G   A  LA  G  ++  + DI              +D++E    E+  
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADII--LFDICHDIETNEYPLATSRDLEEA-GLEVEK 68

Query: 82  A--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN 139
              K    E+D+   A+V    +    +  +L++++ NAGI      L        F  +
Sbjct: 69  TGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVD 128

Query: 140 HLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
            +G          T+            II   S
Sbjct: 129 FVGVIN-------TVHAALPYLTSGASIITTGS 154

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 68.2 bits (167), Expect = 7e-14
 Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 19/159 (11%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVV---MGVRDIAAGKDVK--ETIVKE 78
              +   G   +VTGA  G+G   A   A RG  VV   +G      GK     + +V+E
Sbjct: 2   ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61

Query: 79  IPSAKVDAMELDLSSLASVRNFAS--EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIE 133
           I      A+    ++  SV       +  +    ++++++NNAGI+   +   +S ++ +
Sbjct: 62  IRRRGGKAV----ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD 117

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           +    +  G F +T    D MKK        GRII  +S
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTAS 151

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 66.8 bits (164), Expect = 1e-13
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 29/162 (17%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK------------DVKETIVK 77
            G  A +TGA  G G   A  +A  G  ++    DIA               D+ ET V+
Sbjct: 10  EGRVAFITGAARGQGRAHAVRMAAEGADII--AVDIAGKLPSCVPYDPASPDDLSET-VR 66

Query: 78  EIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIE 133
            + +A  ++ A  +D      +R    +      +L+I++ NAG+        ++ ++  
Sbjct: 67  LVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFR 126

Query: 134 LQFATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSS 172
                N  G +        T+   A    + G  G II +SS
Sbjct: 127 DVMDINVTGTWN-------TVMAGAPRIIEGGRGGSIILISS 161

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 23/156 (14%), Positives = 39/156 (25%), Gaps = 21/156 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
              +TG+ SGIG     +LA  G  V+           D+        P  +  A+   L
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLST------PGGRETAVAAVL 56

Query: 92  SSLAS-----VRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLG 142
                     V          +  L + +N  G+     G    LS+           + 
Sbjct: 57  DRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIA 116

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA 178
                   L  ++         G          +  
Sbjct: 117 ATQPGAAELPMVEA-----MLAGDEARAIELAEQQG 147

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 23/158 (14%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK-------ETIVKEI 79
           +   G  A+VTGA +G+G E A + A RG  VV  V D+              + +V EI
Sbjct: 15  LRYDGRVAVVTGAGAGLGREYALLFAERGAKVV--VNDLGGTHSGDGASQRAADIVVDEI 72

Query: 80  PSAKVDAMELDLSSLASVRNFAS--EYNIQHH-QLNILINNAGIM--GTPFMLSKDNIEL 134
             A  +A+    +   SV + A   E  I+   +++IL+NNAGI+   +    S+ +  L
Sbjct: 73  RKAGGEAV----ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNL 128

Query: 135 QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
               +  G F  T      MKK        GRII  SS
Sbjct: 129 VNDVHLKGSFKCTQAAFPYMKKQ-----NYGRIIMTSS 161

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 38/166 (22%), Positives = 58/166 (34%), Gaps = 33/166 (19%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK---------------DVKET 74
            G  A VTGA  G G   A  LA  G  ++    DI                   D+ ET
Sbjct: 10  EGKVAFVTGAARGQGRSHAVRLAQEGADII--AVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 75  IVKEIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFM-LSK 129
               +     ++   E+D+    +++        Q  +L+I++ NAGI   G      S+
Sbjct: 68  -ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126

Query: 130 DNIELQFATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSS 172
           ++       N  G +        T+K         G  G II  SS
Sbjct: 127 EDWTEMIDINLAGVWK-------TVKAGVPHMIAGGRGGSIILTSS 165

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 23/160 (14%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK--------ETIVKEIPSA 82
           G   IVTGA  GIG   A   A  G  VV  V DI  G D          +++V EI +A
Sbjct: 27  GRVVIVTGAGGGIGRAHALAFAAEGARVV--VNDIGVGLDGSPASGGSAAQSVVDEITAA 84

Query: 83  KVDAMELDLSSLASVRNFASEYNI------QHHQLNILINNAGIM--GTPFMLSKDNIEL 134
             +A+    +  ++V ++     +          L++L+NNAGI+        S++  + 
Sbjct: 85  GGEAV----ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDA 140

Query: 135 QFATNHLGHFLLTNLLLDTMKKTARKSG-GEGRIINVSSE 173
             A +  GHF          +  ++     +GRIIN SS 
Sbjct: 141 VIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG 180

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 66.0 bits (162), Expect = 3e-13
 Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 33/164 (20%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK------------DVKETIVK 77
            G  A +TGA  G G   A  LA  G  ++    DI A              D+ ET  +
Sbjct: 14  QGRVAFITGAARGQGRSHAVRLAAEGADII--ACDICAPVSASVTYAPASPEDLDET-AR 70

Query: 78  EIPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ 135
            +     K     LD+   A++R   ++   Q  +L++++ NAG+    +    +  + Q
Sbjct: 71  LVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGV--LSWGRVWELTDEQ 128

Query: 136 F----ATNHLGHFLLTNLLLDTMKKTAR---KSGGEGRIINVSS 172
           +      N  G +        T++ T     ++G  G I+ VSS
Sbjct: 129 WDTVIGVNLTGTWR-------TLRATVPAMIEAGNGGSIVVVSS 165

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 22/158 (13%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKE 78
            G  A +TGA  G G   A  LA  G  +V    D+   +           ++KET V+ 
Sbjct: 45  QGKVAFITGAARGQGRTHAVRLAQDGADIV--AIDLCRQQPNLDYAQGSPEELKET-VRL 101

Query: 79  IPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIEL 134
           +     ++ A + D+  LAS++    E   +   ++IL++N GI   G    L+      
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSD 161

Query: 135 QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
              TN +G +     +L +M +  +     G +I VSS
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQG----GSVIFVSS 195

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 60.6 bits (148), Expect = 2e-11
 Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 27/160 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-----------DVKETIVKE 78
            G TA++TG   G+G   A  LA  G  +   + D                D+ ET V  
Sbjct: 9   EGKTALITGGARGMGRSHAVALAEAGADIA--ICDRCENSDVVGYPLATADDLAET-VAL 65

Query: 79  IPSA--KVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF 136
           +     +  + ++D+   A++ +F +E       ++I I NAGI  +   L  +    Q+
Sbjct: 66  VEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI--STIALLPEVESAQW 123

Query: 137 ----ATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
                TN  G F     +   M K        GRI+ VSS
Sbjct: 124 DEVIGTNLTGTFNTIAAVAPGMIK-----RNYGRIVTVSS 158

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 59.9 bits (145), Expect = 5e-11
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 14/113 (12%)

Query: 11  PSGFSASSTA----EEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA 66
            +G + ++ A         G    G  A+V   T  +G  +A +LA  G  VV+  R + 
Sbjct: 95  SNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154

Query: 67  AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAG 119
             +   +++ K        A   + +  AS               + +     
Sbjct: 155 KAQAAADSVNKRFKVNVTAA---ETADDASRAEAVKG-------AHFVFTAGA 197

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 14/146 (9%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           +   G+   + GA   +G +  + L   G      V       DV +       S  VDA
Sbjct: 10  LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI-DVFQPEAPAGFSGAVDA 68

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLL 146
              DLS+                + +++ + A I+      ++ + +  +  N  G    
Sbjct: 69  RAADLSAPGEAEKLVE------ARPDVIFHLAAIVSGE---AELDFDKGYRINLDG---- 115

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSS 172
           T  L D ++    K G + R++  SS
Sbjct: 116 TRYLFDAIRIANGKDGYKPRVVFTSS 141

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	216
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.98
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.98
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.98
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.98
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.98
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.98
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.98
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.98
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.98
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.98
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.98
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.98
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.98
1spx_A	278	Short-chain reductase family member (5L265); paral	99.98
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.98
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.97
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.97
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.97
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.97
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.97
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.97
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.97
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.97
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.97
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.97
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.97
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.97
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.97
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.97
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.97
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.97
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.97
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.97
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.97
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.97
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.97
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.97
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.97
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.97
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.97
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.97
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.97
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.97
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.97
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.97
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.97
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.97
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.97
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.97
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.97
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.97
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.96
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.96
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.96
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.96
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.96
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.96
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.96
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.96
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.96
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.96
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.96
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.96
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.96
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.96
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.96
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.95
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.95
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.95
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.95
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.95
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.95
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.94
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.94
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.93
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.93
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.93
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.93
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.91
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.91
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.89
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.89
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.89
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.88
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.88
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.88
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.87
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.87
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.86
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.86
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.85
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.85
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.85
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.84
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.84
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.84
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.84
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.84
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.84
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.84
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.84
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.84
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.83
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.83
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.83
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.83
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.83
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.82
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.82
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.82
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.82
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.82
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.82
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.82
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.82
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.81
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.81
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.8
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.8
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.8
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.79
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.79
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.79
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.79
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.79
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.79
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.78
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.78
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.78
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.77
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.77
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.77
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.77
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.76
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.76
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.76
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.75
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.75
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.75
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.74
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.74
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.73
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.72
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.72
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.72
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.72
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.72
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.71
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.7
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.68
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.68
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.62
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.59
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.59
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.57
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.56
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.55
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.51
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.51
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.49
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.47
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.46
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.45
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.43
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.42
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.41
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.4
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.34
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.23
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.22
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.14
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.01
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.96
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.96
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.88
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.88
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.75
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.7
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.7
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.64
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.59
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.56
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.55
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.54
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.54
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.5
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.49
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.48
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.47
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.47
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.43
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.43
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.41
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.4
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.38
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.36
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.36
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.35
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.3
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.29
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.28
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.25
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.24
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.23
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.22
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.19
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.18
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.12
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.09
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.09
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.07
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	98.07
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.06
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.05
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.04
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.04
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.03
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.01
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.0
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.99
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.98
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.94
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.92
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.9
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.88
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.86
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.85
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.83
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.82
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.78
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.77
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.76
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.75
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.72
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.71
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.7
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.68
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.68
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.67
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.65
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.64
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.59
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.53
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.53
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.52
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.52
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.5
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.49
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.49
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.48
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.45
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.44
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.43
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.42
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.4
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.39
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.38
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.37
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.37
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.35
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.35
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.33
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.33
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.32
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.32
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.3
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	97.29
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.27
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.26
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.26
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.25
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.21
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.19
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.17
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.17
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.16
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.15
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.15
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.14
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.14
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.13
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.13
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.12
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.09
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.09
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.07
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.07
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.03
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.03
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.99
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.97
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.96
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.95
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.93
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.93
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.88
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.87
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.83
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.8
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.79
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.79
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.76
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.75
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.7
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.7
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.7
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.66
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.66
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.65
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.65
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.63
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.63
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.62
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.61
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.57
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.57
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.56
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.51
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.51
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.51
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.51
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.5
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.48
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.47
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.44
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.43
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.43
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.42
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.41
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.39
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.38
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.37
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.34
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.32
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.32
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.31
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.3
1lnq_A	336	MTHK channels, potassium channel related protein;	96.3
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.3
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.29
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.28
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.24
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.24
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.2
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.18
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.16
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.16
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.13
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.13
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.12
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.11
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.09
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.06

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.5e-39  Score=261.66  Aligned_cols=171  Identities=24%  Similarity=0.210  Sum_probs=157.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.++.++++|++|+++++++++++.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999999766  67899999999999999999999999


Q ss_pred             hcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +||+||+||||||+.   .+..+.++++|+++|++|+.++|+++|+++|+|+++     ++|+|||+||.++..+.++..
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~~g~~~~~~~~  155 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-----GKGVIVNTASIAGIRGGFAGA  155 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCSSSSCH
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhcCCCCCCh
Confidence            999999999999975   356689999999999999999999999999999987     789999999999999866554


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                                .|+.||+++.+|++.++....
T Consensus       156 ----------~Y~asKaal~~ltr~lA~ela  176 (254)
T 4fn4_A          156 ----------PYTVAKHGLIGLTRSIAAHYG  176 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHhh
Confidence                      899999999999999986543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4.7e-39  Score=258.91  Aligned_cols=174  Identities=22%  Similarity=0.255  Sum_probs=158.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .+++++||++|||||++|||+++|+.|+++|++|++++|+++++++..+++.+.  +.++..+++|++|+++++++++++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999999999999998876  568899999999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+++|+||+||||||+.  .+..+.+.++|++++++|+.++|+++|+++|+|.++    .++|+|||+||..+..+.|+.
T Consensus        81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~----~~~G~IVnisS~~~~~~~~~~  156 (255)
T 4g81_D           81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR----NSGGKIINIGSLTSQAARPTV  156 (255)
T ss_dssp             HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSBCTTC
T ss_pred             HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----cCCCEEEEEeehhhcCCCCCc
Confidence            99999999999999986  466789999999999999999999999999999764    157999999999999887665


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                      .          .|+.||+++.+|++.++....
T Consensus       157 ~----------~Y~asKaal~~ltr~lA~ela  178 (255)
T 4g81_D          157 A----------PYTAAKGGIKMLTCSMAAEWA  178 (255)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHHHHG
T ss_pred             h----------hHHHHHHHHHHHHHHHHHHhc
Confidence            4          899999999999999986543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=9.2e-37  Score=246.25  Aligned_cols=170  Identities=20%  Similarity=0.230  Sum_probs=151.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      |.++++||++|||||++|||+++|+.|+++|++|++++|+.+..+ ..+++...  +.+..++++|++|+++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHH
Confidence            346799999999999999999999999999999999999987744 44555555  567889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC-CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          105 NIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++||+||+||||||+.. ...+.+.++|++.+++|+.++|+++|+++|+|+++      +|+|||+||..+..+.++..
T Consensus        78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~~~~~~  151 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT------RGAIVNISSKTAVTGQGNTS  151 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTHHHHCCSSCH
T ss_pred             HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc------CCeEEEEeehhhccCCCCch
Confidence            999999999999999863 44578999999999999999999999999999864      69999999999998866654


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                                .|+.||+++.+|++.++...
T Consensus       152 ----------~Y~asKaav~~ltr~lA~el  171 (258)
T 4gkb_A          152 ----------GYCASKGAQLALTREWAVAL  171 (258)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHh
Confidence                      89999999999999998653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.2e-37  Score=250.36  Aligned_cols=164  Identities=17%  Similarity=0.167  Sum_probs=150.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++     +.+...+++|++|+++++++++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999988888777665     456788999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|+||+||||||+.  .+..+.++++|+++|++|+.++|+++|+++|+|++       +|+||++||..+..+.|+..  
T Consensus       101 ~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-------~G~IInisS~~~~~~~~~~~--  171 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-------GSSVVLTGSTAGSTGTPAFS--  171 (273)
T ss_dssp             HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGGSCCTTCH--
T ss_pred             cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCeEEEEeehhhccCCCCch--
Confidence            99999999999986  46778999999999999999999999999999964       68999999999998876654  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              .|++||+++.+|++.++...
T Consensus       172 --------~Y~asKaav~~ltr~lA~El  191 (273)
T 4fgs_A          172 --------VYAASKAALRSFARNWILDL  191 (273)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHT
T ss_pred             --------HHHHHHHHHHHHHHHHHHHh
Confidence                    89999999999999997654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=5.6e-36  Score=239.92  Aligned_cols=160  Identities=22%  Similarity=0.240  Sum_probs=144.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||++|||+++|+.|+++|++|++++|+++.+++    +.++  ..++.++++|++|+++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~----~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD----FAKE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHTT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4899999999999999999999999999999999765544    3334  456889999999999999999999999999


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      ||+||||||+.  .+..+.+.++|++++++|+.++|+++|+++|+|.++      +|+||++||..+..+.|+..     
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~------~G~IInisS~~~~~~~~~~~-----  144 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN------KGRIINIASTRAFQSEPDSE-----  144 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGTSCCTTCH-----
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCcEEEEeecccccCCCCCH-----
Confidence            99999999986  456789999999999999999999999999999874      69999999999998866654     


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           .|+.||+++.+|++.++..
T Consensus       145 -----~Y~asKaal~~ltk~lA~e  163 (247)
T 3ged_A          145 -----AYASAKGGIVALTHALAMS  163 (247)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHHH
Confidence                 8999999999999999764

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=7.4e-36  Score=238.01  Aligned_cols=157  Identities=22%  Similarity=0.243  Sum_probs=141.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.++..        .+.++..+++|++|+++++++++    ++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            5899999999999999999999999999999999998776532        14578999999999999888775    57


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      |++|+||||||+..+..+.+.++|++++++|+.++|+++|+++|+|+++      +|+|||+||..+..+.++..     
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~~~~~~-----  145 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR------GGSILNIASMYSTFGSADRP-----  145 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------CEEEEEECCGGGTSCCSSCH-----
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCeEEEEeeccccCCCCCCH-----
Confidence            8999999999998888889999999999999999999999999999874      79999999999999866654     


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                           .|+.||+++.+|++.++...
T Consensus       146 -----~Y~asKaav~~ltr~lA~El  165 (242)
T 4b79_A          146 -----AYSASKGAIVQLTRSLACEY  165 (242)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHHHh
Confidence                 89999999999999998654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=7.5e-36  Score=238.52  Aligned_cols=165  Identities=23%  Similarity=0.284  Sum_probs=144.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|+.+  ++..+++...  +.+...+++|++|+++++++++   
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~---   76 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT---   76 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST---
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH---
Confidence            46799999999999999999999999999999999999864  4566666655  6678999999999998877663   


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                        ++++|+||||||+.  .+..+.++++|++++++|+.++|+++|+++|+|.++    +++|+|||+||..+..+.++..
T Consensus        77 --~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~----g~~G~IVnisS~~~~~g~~~~~  150 (247)
T 4hp8_A           77 --DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAK----GRSGKVVNIASLLSFQGGIRVP  150 (247)
T ss_dssp             --TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCSSCH
T ss_pred             --hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----CCCcEEEEEechhhCCCCCCCh
Confidence              47999999999986  466789999999999999999999999999999875    1379999999999999866654


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                                .|+.||+++.+|++.++...
T Consensus       151 ----------~Y~asKaav~~ltr~lA~El  170 (247)
T 4hp8_A          151 ----------SYTAAKHGVAGLTKLLANEW  170 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHH
Confidence                      89999999999999998654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=3.6e-35  Score=237.49  Aligned_cols=163  Identities=18%  Similarity=0.194  Sum_probs=143.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++++||++|||||++|||+++|+.|+++|++|++++|+.++.            ..+..++++|++++++++++++++.
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999986431            1223478999999999999999999


Q ss_pred             hhcCCccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          106 IQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +++|++|+||||||+..    ++.+.+.++|++.+++|+.++++++|+++|+|+++     ++|+||++||..+..+.|.
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~Iv~isS~~~~~~~~~  148 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-----GSGVVVHVTSIQRVLPLPE  148 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-----CCceEEEEEehhhccCCCC
Confidence            99999999999999752    45688999999999999999999999999999987     7899999999999887542


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                               ....|+.||+++.+|++.++....
T Consensus       149 ---------~~~~Y~asKaal~~lt~~lA~Ela  172 (261)
T 4h15_A          149 ---------STTAYAAAKAALSTYSKAMSKEVS  172 (261)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHhh
Confidence                     123799999999999999986543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.1e-34  Score=233.53  Aligned_cols=172  Identities=22%  Similarity=0.192  Sum_probs=156.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++....++.++.++++|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999999888888876666679999999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|+||||||+.  .+..+.+.++|++.+++|+.+++.+++.++|+|.++     +.|+||++||..+..+.++. 
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~-  156 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-----ADAAIVCVNSLLASQPEPHM-  156 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-----TTEEEEEEEEGGGTSCCTTB-
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----CCeEEEEECCcccCCCCCCc-
Confidence            9999999999999986  356688999999999999999999999999999875     67999999999998876554 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       157 ---------~~Y~asKaa~~~l~~~la~e  176 (265)
T 3lf2_A          157 ---------VATSAARAGVKNLVRSMAFE  176 (265)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhhHHHHHHHHHHHHHHHHH
Confidence                     38999999999999998754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4.2e-34  Score=230.23  Aligned_cols=168  Identities=18%  Similarity=0.155  Sum_probs=152.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999999999999888776  57899999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      . +++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++.  
T Consensus        81 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~--  152 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-----GQGKIFFTGATASLRGGSGF--  152 (252)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTCCCTTC--
T ss_pred             h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHHcCCCCCC--
Confidence            8 99999999999863  45578999999999999999999999999999987     67999999999998876554  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.||+++++|++.++..
T Consensus       153 --------~~Y~asKaa~~~l~~~la~e  172 (252)
T 3h7a_A          153 --------AAFASAKFGLRAVAQSMARE  172 (252)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------ccHHHHHHHHHHHHHHHHHH
Confidence                    38999999999999998754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=6e-34  Score=229.79  Aligned_cols=170  Identities=27%  Similarity=0.313  Sum_probs=153.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++++|++|+++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998888888888765  5679999999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          106 IQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +.++++|+||||||+..+ ..+.+.++|++++++|+.+++.++++++|.|+++     +.|+||++||..+..+.++.  
T Consensus        85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~--  157 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-----GGGAILNISSMAGENTNVRM--  157 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTCCCTTC--
T ss_pred             HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHHHcCCCCCc--
Confidence            999999999999998632 2278999999999999999999999999999886     67999999999998875543  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.||+++++|++.++..
T Consensus       158 --------~~Y~asKaa~~~~~~~la~e  177 (256)
T 3gaf_A          158 --------ASYGSSKAAVNHLTRNIAFD  177 (256)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hHHHHHHHHHHHHHHHHHHH
Confidence                    48999999999999998754

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=8.1e-34  Score=229.76  Aligned_cols=172  Identities=23%  Similarity=0.279  Sum_probs=153.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++.++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... ..++.++++|++|+++++++++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999998888888887652 367999999999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc-ccccC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHE  181 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~  181 (216)
                      .++++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+. .+.++
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~~  157 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-----GSGRVVLTSSITGPITGYPG  157 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----SSCEEEEECCSBTTTBCCTT
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccCCCCC
Confidence            99999999999999986  356688999999999999999999999999999987     67999999998886 55443


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ...|+.||+++++|++.++..
T Consensus       158 ----------~~~Y~asK~a~~~l~~~la~e  178 (262)
T 3pk0_A          158 ----------WSHYGATKAAQLGFMRTAAIE  178 (262)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------ChhhHHHHHHHHHHHHHHHHH
Confidence                      348999999999999998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=6e-34  Score=230.92  Aligned_cols=167  Identities=24%  Similarity=0.286  Sum_probs=152.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +.+|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999888888888765  5688999999999999999999999999


Q ss_pred             CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++..   
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~~~~~~---  151 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-----RSGQIINIGSIGALSVVPTAA---  151 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCTTCH---
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCeEEEEEcCHHHcccCCCCh---
Confidence            9999999999986  345678999999999999999999999999999987     679999999999988755543   


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             .|+.||+++++|++.++..
T Consensus       152 -------~Y~asKaal~~l~~~la~e  170 (264)
T 3tfo_A          152 -------VYCATKFAVRAISDGLRQE  170 (264)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHH
T ss_pred             -------hHHHHHHHHHHHHHHHHHh
Confidence                   8999999999999988753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.5e-34  Score=232.49  Aligned_cols=174  Identities=26%  Similarity=0.296  Sum_probs=150.2

Q ss_pred             ccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        22 ~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ...++.++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|++++++++
T Consensus        19 ~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~   96 (283)
T 3v8b_A           19 YFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAV   96 (283)
T ss_dssp             --------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHH
T ss_pred             hhhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHH
Confidence            334556788999999999999999999999999999999999998888888877554  567899999999999999999


Q ss_pred             HHHHhhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-
Q 027991          102 SEYNIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-  177 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-  177 (216)
                      +++.+.+|++|+||||||+.   .+..+.+.++|++++++|+.+++.++++++|+|+++     +.|+||++||..+.. 
T Consensus        97 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~~  171 (283)
T 3v8b_A           97 RDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-----GGGAIVVVSSINGTRT  171 (283)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTB
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCceEEEEcChhhccC
Confidence            99999999999999999985   456788999999999999999999999999999987     679999999998876 


Q ss_pred             -cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 -AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 -~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                       +.+          +...|+.||+++++|++.++..
T Consensus       172 ~~~~----------~~~~Y~asKaa~~~l~~~la~e  197 (283)
T 3v8b_A          172 FTTP----------GATAYTATKAAQVAIVQQLALE  197 (283)
T ss_dssp             CCST----------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC----------CchHHHHHHHHHHHHHHHHHHH
Confidence             333          3348999999999999998754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=4.1e-34  Score=229.73  Aligned_cols=168  Identities=23%  Similarity=0.296  Sum_probs=150.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .+.++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++.     .+..++++|++|+++++++++++
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHH
Confidence            3466899999999999999999999999999999999999887777766653     34678999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .++++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.++.
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~~  152 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-----RQGRIINVGSVVGTMGNAGQ  152 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCTTC
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcCCCCCC
Confidence            999999999999999863  45578999999999999999999999999999886     67999999999998876544


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       153 ----------~~Y~asK~a~~~l~~~la~e  172 (248)
T 3op4_A          153 ----------ANYAAAKAGVIGFTKSMARE  172 (248)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHH
Confidence                      38999999999999998764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=5.7e-34  Score=231.14  Aligned_cols=175  Identities=23%  Similarity=0.290  Sum_probs=155.7

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      ...+.++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... +.++.++++|++|+++++++++
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~   90 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELAR   90 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHH
Confidence            344567899999999999999999999999999999999999988888888887643 5679999999999999999999


Q ss_pred             HHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++.+.++++|+||||||+..  +..+.+.++|++++++|+.+++.++++++|.|.++.    .+|+||++||..+..+.+
T Consensus        91 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~  166 (266)
T 4egf_A           91 RAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG----EGGAIITVASAAALAPLP  166 (266)
T ss_dssp             HHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSCCT
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEEEEEcchhhccCCC
Confidence            99999999999999999863  456789999999999999999999999999998761    268999999999988755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       167 ~~----------~~Y~asK~a~~~l~~~la~e  188 (266)
T 4egf_A          167 DH----------YAYCTSKAGLVMATKVLARE  188 (266)
T ss_dssp             TC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CC----------hHHHHHHHHHHHHHHHHHHH
Confidence            54          38999999999999998764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.7e-33  Score=229.65  Aligned_cols=191  Identities=21%  Similarity=0.234  Sum_probs=155.5

Q ss_pred             ccCCCCCCCCCCccccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEE
Q 027991            8 RKGPSGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      +..++.+.+-+.+-......++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++
T Consensus         9 ~~~~~~~~~g~~~m~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~   86 (276)
T 3r1i_A            9 MGTLEAQTQGPGSMSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPI   86 (276)
T ss_dssp             --------------CGGGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEE
T ss_pred             ccceeccccCCCCcccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEE
Confidence            44455555555444455567899999999999999999999999999999999999999999888888765  5678899


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG  165 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g  165 (216)
                      ++|++|+++++++++++.++++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|.|.++.    .+|
T Consensus        87 ~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~----~~g  162 (276)
T 3r1i_A           87 RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG----LGG  162 (276)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCE
T ss_pred             EcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----CCc
Confidence            99999999999999999999999999999999863  455789999999999999999999999999998761    248


Q ss_pred             EEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          166 RIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       166 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +||++||..+..+.+.        .....|+.||+++++|++.++..
T Consensus       163 ~iv~isS~~~~~~~~~--------~~~~~Y~asKaa~~~l~~~la~e  201 (276)
T 3r1i_A          163 TIITTASMSGHIINIP--------QQVSHYCTSKAAVVHLTKAMAVE  201 (276)
T ss_dssp             EEEEECCGGGTSCCCS--------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECchHhcccCCC--------CCcchHHHHHHHHHHHHHHHHHH
Confidence            9999999988765321        23458999999999999998764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=7.2e-34  Score=231.12  Aligned_cols=171  Identities=23%  Similarity=0.242  Sum_probs=153.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +...+++|++|||||++|||.++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   99 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVEST   99 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999998888888888765  567889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.++.
T Consensus       100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  174 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-----RGGRIVNITSVVGSAGNPGQ  174 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCTTB
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCCCCCCc
Confidence            999999999999999863  45678999999999999999999999999999886     68999999999998876554


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       175 ----------~~Y~asKaa~~~l~~~la~e  194 (270)
T 3ftp_A          175 ----------VNYAAAKAGVAGMTRALARE  194 (270)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHH
Confidence                      38999999999999998764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.8e-33  Score=231.38  Aligned_cols=173  Identities=23%  Similarity=0.234  Sum_probs=154.2

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ..+.++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... ..++.++++|++|++++++++++
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999988888886542 35789999999999999999999


Q ss_pred             HHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc-cccc
Q 027991          104 YNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYH  180 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~  180 (216)
                      +.+.++++|+||||||+.  .+..+.+.++|++.+++|+.++++++++++|.|.++     +.|+||++||..+. .+.+
T Consensus       113 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iV~isS~~~~~~~~~  187 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-----GRGRVILTSSITGPVTGYP  187 (293)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-----SSCEEEEECCSBTTTBBCT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEeChhhccCCCC
Confidence            999999999999999986  355678999999999999999999999999999987     67999999999885 5544


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +          ...|+.||+++++|++.++..
T Consensus       188 ~----------~~~Y~asKaa~~~l~~~la~e  209 (293)
T 3rih_A          188 G----------WSHYGASKAAQLGFMRTAAIE  209 (293)
T ss_dssp             T----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             C----------CHHHHHHHHHHHHHHHHHHHH
Confidence            3          348999999999999988754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-33  Score=228.95  Aligned_cols=170  Identities=24%  Similarity=0.219  Sum_probs=149.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC------------CcchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      +.++++|++|||||++|||.+++++|+++|++|++++|+            .+.+++..+++...  +.++.++++|++|
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~   82 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKD   82 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            456899999999999999999999999999999999997            33445555555443  5679999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEc
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  171 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~is  171 (216)
                      +++++++++++.+.++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++|
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~is  157 (281)
T 3s55_A           83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-----NYGRIVTVS  157 (281)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEC
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEC
Confidence            9999999999999999999999999986  355688999999999999999999999999999887     679999999


Q ss_pred             CCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          172 SEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |..+..+.++.          ..|+.||+++++|++.++..
T Consensus       158 S~~~~~~~~~~----------~~Y~asK~a~~~~~~~la~e  188 (281)
T 3s55_A          158 SMLGHSANFAQ----------ASYVSSKWGVIGLTKCAAHD  188 (281)
T ss_dssp             CGGGGSCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhhcCCCCCC----------chhHHHHHHHHHHHHHHHHH
Confidence            99998875544          38999999999999998764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=9.7e-34  Score=228.72  Aligned_cols=170  Identities=14%  Similarity=0.106  Sum_probs=150.3

Q ss_pred             CCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +++++||++|||||+|  |||+++|+.|+++|++|++++|+++..+++.+++.+. ++.+..++++|++|++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL-NQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG-TCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCcEEEEEccCCCHHHHHHHHHH
Confidence            4679999999999875  9999999999999999999999998888877766554 356788999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          104 YNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      +.+++|++|+||||||+..      +..+.+.++|...+++|+.+++.+++.+.++++       ++|+||++||..+..
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~-------~~G~IVnisS~~~~~  152 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP-------EGGSIVATTYLGGEF  152 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT-------TCEEEEEEECGGGTS
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cCCEEEEEecccccc
Confidence            9999999999999999752      344678899999999999999999999998876       379999999999998


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      +.++..          .|+.||+++.+|++.++...
T Consensus       153 ~~~~~~----------~Y~asKaal~~ltr~lA~El  178 (256)
T 4fs3_A          153 AVQNYN----------VMGVAKASLEANVKYLALDL  178 (256)
T ss_dssp             CCTTTH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             Ccccch----------hhHHHHHHHHHHHHHHHHHh
Confidence            866654          89999999999999998654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.4e-33  Score=230.09  Aligned_cols=174  Identities=17%  Similarity=0.150  Sum_probs=155.2

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      +.+...+++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++.... +.++.++++|++|+++++++++
T Consensus        19 ~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~   97 (277)
T 4fc7_A           19 LFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVD   97 (277)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHH
Confidence            344556899999999999999999999999999999999999988888888776554 5679999999999999999999


Q ss_pred             HHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          103 EYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++.+.++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.+
T Consensus        98 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  172 (277)
T 4fc7_A           98 QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-----HGGVIVNITATLGNRGQA  172 (277)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCSHHHHTCT
T ss_pred             HHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCCCCC
Confidence            9999999999999999976  345678999999999999999999999999999876     579999999999988755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       173 ~~----------~~Y~asKaa~~~l~~~la~e  194 (277)
T 4fc7_A          173 LQ----------VHAGSAKAAVDAMTRHLAVE  194 (277)
T ss_dssp             TC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             Cc----------HHHHHHHHHHHHHHHHHHHH
Confidence            54          38999999999999998754

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=7.5e-34  Score=231.14  Aligned_cols=170  Identities=22%  Similarity=0.276  Sum_probs=154.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++||++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888888765  5678999999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.++. 
T Consensus        99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iV~isS~~~~~~~~~~-  172 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-----GYGKIVNIGSLTSELARATV-  172 (271)
T ss_dssp             HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSBCTTC-
T ss_pred             HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCCCCCCc-
Confidence            9999999999999986  345678999999999999999999999999999987     67999999999998875544 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       173 ---------~~Y~asKaa~~~l~~~la~e  192 (271)
T 4ibo_A          173 ---------APYTVAKGGIKMLTRAMAAE  192 (271)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHH
Confidence                     38999999999999998754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.7e-33  Score=226.47  Aligned_cols=170  Identities=23%  Similarity=0.311  Sum_probs=146.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCC-CeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++....++ .++.++++|++|+++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999988888777544 678999999999999999999999


Q ss_pred             hhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|+||||||+..  +. +.+.++|++++++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++  
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~--  154 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-----KNGYIFNVASRAAKYGFAD--  154 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECC-------CC--
T ss_pred             HhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEEEccHHhcCCCCC--
Confidence            99999999999999863  33 67889999999999999999999999999987     6799999999998875433  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||+++++|++.++..
T Consensus       155 --------~~~Y~asKaa~~~l~~~la~e  175 (250)
T 3nyw_A          155 --------GGIYGSTKFALLGLAESLYRE  175 (250)
T ss_dssp             --------TTHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CcchHHHHHHHHHHHHHHHHH
Confidence                    348999999999999998764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.2e-33  Score=230.09  Aligned_cols=183  Identities=24%  Similarity=0.207  Sum_probs=146.0

Q ss_pred             CCCCCCCCccccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           12 SGFSASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      ++.......-++.++..+.+|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|+
T Consensus         9 ~~~~~~~~~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv   83 (272)
T 4dyv_A            9 SGVDLGTENLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDV   83 (272)
T ss_dssp             -------------------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCT
T ss_pred             ccccCCcceeehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecC
Confidence            4445555555666667789999999999999999999999999999999999988777766655     35688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEE
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII  168 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv  168 (216)
                      +|+++++++++++.+.++++|+||||||+..   +..+.+.++|++++++|+.+++.++++++|.|.++.   .++|+||
T Consensus        84 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~~~g~IV  160 (272)
T 4dyv_A           84 TDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQE---PRGGRII  160 (272)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS---SCCEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC---CCCcEEE
Confidence            9999999999999999999999999999863   456789999999999999999999999999998751   1268999


Q ss_pred             EEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          169 NVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       169 ~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++||..+..+.++.          ..|+.||+++++|++.++..
T Consensus       161 ~isS~~~~~~~~~~----------~~Y~asKaa~~~l~~~la~e  194 (272)
T 4dyv_A          161 NNGSISATSPRPYS----------APYTATKHAITGLTKSTSLD  194 (272)
T ss_dssp             EECCSSTTSCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             EECchhhcCCCCCc----------hHHHHHHHHHHHHHHHHHHH
Confidence            99999998875544          38999999999999998754

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=3.4e-33  Score=224.85  Aligned_cols=170  Identities=22%  Similarity=0.230  Sum_probs=153.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC--CCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL--SSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv--~~~~~~~~~~~~~  104 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... +.++.++.+|+  +|+++++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHH
Confidence            45889999999999999999999999999999999999988888888887654 34678899999  9999999999999


Q ss_pred             HhhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          105 NIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      .+.++++|+||||||+.   .+..+.+.++|++++++|+.+++.++|+++|+|+++     +.|+||++||..+..+.++
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~  161 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-----DAGSLVFTSSSVGRQGRAN  161 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGTSCCTT
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-----CCCEEEEECChhhccCCCC
Confidence            99999999999999985   356688999999999999999999999999999876     6799999999999887554


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       162 ~----------~~Y~asK~a~~~l~~~la~e  182 (252)
T 3f1l_A          162 W----------GAYAASKFATEGMMQVLADE  182 (252)
T ss_dssp             C----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             C----------chhHHHHHHHHHHHHHHHHH
Confidence            4          38999999999999998764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.2e-33  Score=229.10  Aligned_cols=172  Identities=24%  Similarity=0.329  Sum_probs=149.7

Q ss_pred             cccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHH
Q 027991           21 EEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        21 ~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      +.+...+++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++
T Consensus        17 ~~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~   91 (277)
T 4dqx_A           17 NLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESM   91 (277)
T ss_dssp             -----CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHH
T ss_pred             ccccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHH
Confidence            3444556789999999999999999999999999999999999987776666553     56788999999999999999


Q ss_pred             HHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          101 ASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++++.+.++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|+++     +.|+||++||..+..+
T Consensus        92 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~  166 (277)
T 4dqx_A           92 VEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-----GGGSIINTTSYTATSA  166 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----TCEEEEEECCGGGTSC
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhCcC
Confidence            999999999999999999986  355678999999999999999999999999999876     5789999999998887


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .++.          ..|+.||+++++|++.++..
T Consensus       167 ~~~~----------~~Y~asKaa~~~l~~~la~e  190 (277)
T 4dqx_A          167 IADR----------TAYVASKGAISSLTRAMAMD  190 (277)
T ss_dssp             CTTB----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC----------hhHHHHHHHHHHHHHHHHHH
Confidence            5544          38999999999999998754

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-33  Score=229.07  Aligned_cols=172  Identities=22%  Similarity=0.255  Sum_probs=149.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-------------CCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-------------DIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      .+..+++|++|||||++|||.+++++|+++|++|++++|             +.+++++..+++...  +.++.++++|+
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv   86 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDV   86 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCT
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCC
Confidence            345689999999999999999999999999999999998             455566666666544  56789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEE
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~  169 (216)
                      +|+++++++++++.+.++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|+|.++    +.+|+||+
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~~~g~iv~  162 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEA----GNGGSIVV  162 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----CSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCCCEEEE
Confidence            9999999999999999999999999999863  45578999999999999999999999999999876    12789999


Q ss_pred             EcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          170 VSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       170 isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +||..+..+.++.          ..|+.||+++++|++.++..
T Consensus       163 isS~~~~~~~~~~----------~~Y~asKaa~~~~~~~la~e  195 (280)
T 3pgx_A          163 VSSSAGLKATPGN----------GHYSASKHGLTALTNTLAIE  195 (280)
T ss_dssp             ECCGGGTSCCTTB----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             EcchhhccCCCCc----------hhHHHHHHHHHHHHHHHHHH
Confidence            9999998876554          38999999999999998764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.2e-33  Score=229.07  Aligned_cols=169  Identities=26%  Similarity=0.298  Sum_probs=148.5

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ++..++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|++++++++++
T Consensus        22 m~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~   96 (277)
T 3gvc_A           22 MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDA   96 (277)
T ss_dssp             -----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHH
Confidence            3345789999999999999999999999999999999999988777666655     45788999999999999999999


Q ss_pred             HHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+.++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.++
T Consensus        97 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~~~~~  171 (277)
T 3gvc_A           97 CVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-----GGGAIVNLSSLAGQVAVGG  171 (277)
T ss_dssp             HHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSCCTT
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhccCCCC
Confidence            999999999999999986  355678999999999999999999999999999886     6899999999999887554


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       172 ~----------~~Y~asKaa~~~l~~~la~e  192 (277)
T 3gvc_A          172 T----------GAYGMSKAGIIQLSRITAAE  192 (277)
T ss_dssp             B----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             c----------hhHHHHHHHHHHHHHHHHHH
Confidence            4          38999999999999988754

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-33  Score=226.40  Aligned_cols=169  Identities=18%  Similarity=0.203  Sum_probs=152.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999998888888888765  5689999999999999999999999


Q ss_pred             hhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|+||||||..   .+..+.+.++|++++++|+.+++.+++.++|.|.++      +|+||++||..+..+.++.
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~  157 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES------KGAVVNVNSMVVRHSQAKY  157 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH------TCEEEEECCGGGGCCCTTC
T ss_pred             HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEECcchhccCCCcc
Confidence            9999999999999885   355678999999999999999999999999999885      5899999999998875554


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          .|+.||+++++|++.++..
T Consensus       158 ~----------~Y~asKaa~~~~~~~la~e  177 (264)
T 3ucx_A          158 G----------AYKMAKSALLAMSQTLATE  177 (264)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHHH
T ss_pred             H----------HHHHHHHHHHHHHHHHHHH
Confidence            3          8999999999999998764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-33  Score=229.23  Aligned_cols=172  Identities=23%  Similarity=0.216  Sum_probs=150.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .+.++.+|++|||||++|||.+++++|+++|++|++++| +.+.+++..+++.... +.++.++++|++|++++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~   97 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAM   97 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHH
Confidence            355788999999999999999999999999999999999 4556666666665442 56799999999999999999999


Q ss_pred             HHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+.++++|+||||||+.  .+..+.+.++|++++++|+.+++.++++++|.|.++     +.|+||++||..+..+.++
T Consensus        98 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~  172 (281)
T 3v2h_A           98 VADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-----GWGRIINIASAHGLVASPF  172 (281)
T ss_dssp             HHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT
T ss_pred             HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCcccccCCCC
Confidence            999999999999999986  345578999999999999999999999999999987     6799999999999887655


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       173 ~----------~~Y~asKaa~~~l~~~la~e  193 (281)
T 3v2h_A          173 K----------SAYVAAKHGIMGLTKTVALE  193 (281)
T ss_dssp             C----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             c----------hHHHHHHHHHHHHHHHHHHH
Confidence            4          38999999999999998754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.7e-33  Score=228.81  Aligned_cols=171  Identities=24%  Similarity=0.284  Sum_probs=150.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +...+++|++|||||++|||.+++++|+++|++|++++| +.+..++..+++...  +.++.++++|++|++++++++++
T Consensus        22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~   99 (269)
T 4dmm_A           22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAA   99 (269)
T ss_dssp             --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHH
Confidence            346789999999999999999999999999999999998 455566666666654  56789999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+.++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.++
T Consensus       100 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~  174 (269)
T 4dmm_A          100 VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-----RSGRIINIASVVGEMGNPG  174 (269)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCHHHHHCCTT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcCCCCC
Confidence            9999999999999999873  45578999999999999999999999999999886     6799999999999887654


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       175 ~----------~~Y~asK~a~~~l~~~la~e  195 (269)
T 4dmm_A          175 Q----------ANYSAAKAGVIGLTKTVAKE  195 (269)
T ss_dssp             C----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             c----------hhHHHHHHHHHHHHHHHHHH
Confidence            4          38999999999999998764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=2e-33  Score=228.09  Aligned_cols=168  Identities=24%  Similarity=0.257  Sum_probs=143.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++.++++|++|||||++|||.++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999987776665543     567899999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.
T Consensus        96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~Iv~isS~~~~~~~~~~  170 (266)
T 3grp_A           96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-----RYGRIINITSIVGVVGNPGQ  170 (266)
T ss_dssp             HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCC-------CH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHHcCCCCCc
Confidence            999999999999999863  45678899999999999999999999999999886     67999999999998875543


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       171 ----------~~Y~asKaa~~~~~~~la~e  190 (266)
T 3grp_A          171 ----------TNYCAAKAGLIGFSKALAQE  190 (266)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHH
Confidence                      38999999999999998764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=5.4e-33  Score=229.00  Aligned_cols=173  Identities=16%  Similarity=0.132  Sum_probs=150.8

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC------------CcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      .+..++++|++|||||++|||.++|+.|+++|++|++++|+            .+.+++..+++...  +.++.++++|+
T Consensus        21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv   98 (299)
T 3t7c_A           21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDV   98 (299)
T ss_dssp             -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCT
T ss_pred             ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCC
Confidence            34567899999999999999999999999999999999987            45556666666554  56899999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEE
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII  168 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv  168 (216)
                      +|+++++++++++.+.++++|+||||||+..   +..+.+.++|++++++|+.+++.++++++|.|.++    ++.|+||
T Consensus        99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~----~~~g~Iv  174 (299)
T 3t7c_A           99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAG----KRGGSIV  174 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----TSCEEEE
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEE
Confidence            9999999999999999999999999999863   25678999999999999999999999999999875    1368999


Q ss_pred             EEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          169 NVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       169 ~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++||..+..+.++..          .|+.||+++++|++.++..
T Consensus       175 ~isS~~~~~~~~~~~----------~Y~asKaa~~~l~~~la~e  208 (299)
T 3t7c_A          175 FTSSIGGLRGAENIG----------NYIASKHGLHGLMRTMALE  208 (299)
T ss_dssp             EECCGGGTSCCTTCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             EECChhhccCCCCcc----------hHHHHHHHHHHHHHHHHHH
Confidence            999999988765543          8999999999999998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.6e-33  Score=226.91  Aligned_cols=171  Identities=16%  Similarity=0.126  Sum_probs=148.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-------------CCcchHHHHHHHHhhcCCCeEEEEEccCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-------------DIAAGKDVKETIVKEIPSAKVDAMELDLS   92 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   92 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|             +.+.+++..+++...  +.++.++.+|++
T Consensus         6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~   83 (277)
T 3tsc_A            6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTR   83 (277)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCC
Confidence            35688999999999999999999999999999999998             445556666665544  567999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEE
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINV  170 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~i  170 (216)
                      |+++++++++++.+.++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|.|.++.    .+|+||++
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~iv~i  159 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG----RGGSIILI  159 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CCCEEEEE
Confidence            999999999999999999999999999864  445789999999999999999999999999998761    26899999


Q ss_pred             cCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          171 SSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       171 sS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ||..+..+.++..          .|+.||+++++|++.++..
T Consensus       160 sS~~~~~~~~~~~----------~Y~asKaa~~~~~~~la~e  191 (277)
T 3tsc_A          160 SSAAGMKMQPFMI----------HYTASKHAVTGLARAFAAE  191 (277)
T ss_dssp             CCGGGTSCCSSCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ccHhhCCCCCCch----------hhHHHHHHHHHHHHHHHHH
Confidence            9999988765543          8999999999999998764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=2.9e-33  Score=225.84  Aligned_cols=169  Identities=20%  Similarity=0.183  Sum_probs=150.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777543  567899999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.++    ...|+||++||..+..+.++..  
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~~~~--  154 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK----GIKGNIINMVATYAWDAGPGVI--  154 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TCCCEEEEECCGGGGSCCTTCH--
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh----CCCcEEEEECchhhccCCCCcH--
Confidence            99999999999986  355678999999999999999999999999999654    1478999999999988755443  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              .|+.||+++++|++.++..
T Consensus       155 --------~Y~asKaa~~~l~~~la~e  173 (257)
T 3imf_A          155 --------HSAAAKAGVLAMTKTLAVE  173 (257)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHHH
Confidence                    8999999999999988753

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.3e-33  Score=228.18  Aligned_cols=173  Identities=17%  Similarity=0.118  Sum_probs=152.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +..++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++..... ..++.++++|++|++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            45678899999999999999999999999999999999999888888888876532 12799999999999999999999


Q ss_pred             HHhhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          104 YNIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +.+.++++|+||||||+.   .+..+.+.++|++++++|+.++++++++++|.|.++     ++|+||++||..+..+.+
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  159 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-----GGGSFVGISSIAASNTHR  159 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCHHHHSCCT
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEeCHHHcCCCC
Confidence            999999999999999984   355678999999999999999999999999999886     689999999999887755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       160 ~~----------~~Y~asK~a~~~l~~~la~e  181 (281)
T 3svt_A          160 WF----------GAYGVTKSAVDHLMQLAADE  181 (281)
T ss_dssp             TC----------THHHHHHHHHHHHHHHHHHH
T ss_pred             CC----------hhHHHHHHHHHHHHHHHHHH
Confidence            43          38999999999999988754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.1e-33  Score=228.32  Aligned_cols=168  Identities=27%  Similarity=0.302  Sum_probs=148.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888888888765  567999999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHH--HHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLD--TMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~--~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      ++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|  .|.++     +.|+||++||..+..+.++..
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----~~g~iV~isS~~~~~~~~~~~  173 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-----GWGRIVNIASTGGKQGVMYAA  173 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-----TCEEEEEECCGGGTSCCTTCH
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-----CCcEEEEECChhhccCCCCCh
Confidence            999999999999863  456789999999999999999999999999  47765     579999999999988755543


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                .|+.||+++++|++.++..
T Consensus       174 ----------~Y~asKaa~~~l~~~la~e  192 (279)
T 3sju_A          174 ----------PYTASKHGVVGFTKSVGFE  192 (279)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hHHHHHHHHHHHHHHHHHH
Confidence                      8999999999999998764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-33  Score=230.65  Aligned_cols=171  Identities=25%  Similarity=0.341  Sum_probs=156.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .++++|++|||||++|||.++|++|+++|+   +|++++|+.+++++..+++....++.++.++++|++|++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999998   99999999999999999998887778999999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          104 YNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +.+.++++|+||||||+..   +..+.+.++|++++++|+.++++++++++|.|+++     +.|+||++||..+..+.+
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~~~  183 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-----NSGDIVNLGSIAGRDAYP  183 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCT
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEECChhhcCCCC
Confidence            9999999999999999753   45678999999999999999999999999999887     689999999999988755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       184 ~~----------~~Y~asKaa~~~l~~~la~e  205 (287)
T 3rku_A          184 TG----------SIYCASKFAVGAFTDSLRKE  205 (287)
T ss_dssp             TC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CC----------chHHHHHHHHHHHHHHHHHH
Confidence            54          38999999999999998764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-33  Score=224.83  Aligned_cols=171  Identities=21%  Similarity=0.256  Sum_probs=152.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++....++.++.++++|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888888888777665566789999999999999999999999


Q ss_pred             hcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|+||||||+..   +..+.+.++|++++++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++  
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~--  161 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIRGIGN--  161 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSBCSS--
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhccCCCC--
Confidence            9999999999999863   34577899999999999999999999999999886     5799999999998876544  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||+++++|++.++..
T Consensus       162 --------~~~Y~asK~a~~~~~~~la~e  182 (267)
T 1iy8_A          162 --------QSGYAAAKHGVVGLTRNSAVE  182 (267)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CccHHHHHHHHHHHHHHHHHH
Confidence                    348999999999999988754

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=5.9e-33  Score=224.21  Aligned_cols=168  Identities=21%  Similarity=0.259  Sum_probs=148.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +.++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999988777766655     4568899999999999999999999


Q ss_pred             hhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      ++++++|+||||||+..  +..+.+.++|++++++|+.+++++++.++|.|.++.    .+|+||++||..+..+.++. 
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~-  152 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG----RGGKIINMASQAGRRGEALV-  152 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSCCTTB-
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEEEEECChhhccCCCCC-
Confidence            99999999999999863  456789999999999999999999999999998761    26899999999998875544 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       153 ---------~~Y~asK~a~~~~~~~la~e  172 (259)
T 4e6p_A          153 ---------AIYCATKAAVISLTQSAGLD  172 (259)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHH
Confidence                     38999999999999998753

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-33  Score=229.47  Aligned_cols=170  Identities=25%  Similarity=0.248  Sum_probs=150.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +.++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999998888888777543  5678999999999999999999999


Q ss_pred             hhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc-ccccC
Q 027991          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHE  181 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~  181 (216)
                      +.++++|+||||||+.   .+..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+. .+.++
T Consensus        81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  155 (280)
T 3tox_A           81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-----GGGSLTFTSSFVGHTAGFAG  155 (280)
T ss_dssp             HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCSBTTTBCCTT
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEcChhhCcCCCCC
Confidence            9999999999999976   345578999999999999999999999999999986     67999999998887 44333


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ...|+.||+++++|++.++..
T Consensus       156 ----------~~~Y~asKaa~~~l~~~la~e  176 (280)
T 3tox_A          156 ----------VAPYAASKAGLIGLVQALAVE  176 (280)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHH
Confidence                      348999999999999998764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.7e-33  Score=224.86  Aligned_cols=167  Identities=25%  Similarity=0.283  Sum_probs=148.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777766655     56788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|+|+++.    ..|+||++||..+..+.++.. 
T Consensus        77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~-  151 (247)
T 3rwb_A           77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG----KAGRVISIASNTFFAGTPNMA-  151 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCTHHHHTCTTCH-
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----CCcEEEEECchhhccCCCCch-
Confidence            9999999999999863  455789999999999999999999999999998861    268999999999988765543 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+.||+++++|++.++..
T Consensus       152 ---------~Y~asKaa~~~~~~~la~e  170 (247)
T 3rwb_A          152 ---------AYVAAKGGVIGFTRALATE  170 (247)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhHHHHHHHHHHHHHHHHH
Confidence                     8999999999999998754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=7.7e-33  Score=226.48  Aligned_cols=172  Identities=20%  Similarity=0.152  Sum_probs=149.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC----------------CcchHHHHHHHHhhcCCCeEEEEE
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD----------------IAAGKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      +...+++|++|||||++|||.++++.|+++|++|++++|+                .+.+++..+++...  +.++.+++
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   82 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAE   82 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEE
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEE
Confidence            3456899999999999999999999999999999999987                44455555555443  56899999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCc
Q 027991           89 LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG  165 (216)
Q Consensus        89 ~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g  165 (216)
                      +|++|+++++++++++.+.++++|+||||||+..   +..+.+.++|++++++|+.++++++++++|.|.++.    .+|
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g  158 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG----RGG  158 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCE
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC----CCc
Confidence            9999999999999999999999999999999863   255789999999999999999999999999998761    268


Q ss_pred             EEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          166 RIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       166 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +||++||..+..+.++..          .|+.||+++++|++.++..
T Consensus       159 ~iv~isS~~~~~~~~~~~----------~Y~asKaa~~~~~~~la~e  195 (286)
T 3uve_A          159 SIILTSSVGGLKAYPHTG----------HYVAAKHGVVGLMRAFGVE  195 (286)
T ss_dssp             EEEEECCGGGTSCCTTCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECchhhccCCCCcc----------HHHHHHHHHHHHHHHHHHH
Confidence            999999999988765543          8999999999999998764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.2e-33  Score=225.82  Aligned_cols=167  Identities=22%  Similarity=0.269  Sum_probs=149.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++|++|||||++|||.+++++|+++|++|+++ +|+.+.+++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999997 78888788888777654  568999999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+.  .+..+.+.++|++.+++|+.++++++++++|.|+++     +.|+||++||..+..+.++.   
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~~---  151 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-----GGGHIVSISSLGSIRYLENY---  151 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEEEEGGGTSBCTTC---
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhCCCCCCc---
Confidence            99999999999975  455678999999999999999999999999999976     67999999999988775544   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       152 -------~~Y~asKaa~~~l~~~la~e  171 (258)
T 3oid_A          152 -------TTVGVSKAALEALTRYLAVE  171 (258)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHHHH
Confidence                   48999999999999998764

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.2e-32  Score=221.00  Aligned_cols=167  Identities=28%  Similarity=0.361  Sum_probs=149.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988888877777654  557889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|.++     + |+||++||..+..+.++.   
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~-g~iv~isS~~~~~~~~~~---  152 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-----K-GTVVQMSSIAGRVNVRNA---  152 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----T-CEEEEECCGGGTCCCTTC---
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----C-CEEEEEccHHhcCCCCCC---
Confidence            99999999999986  355678999999999999999999999999999876     4 899999999988765443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       153 -------~~Y~asK~a~~~~~~~la~e  172 (247)
T 2jah_A          153 -------AVYQATKFGVNAFSETLRQE  172 (247)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cHHHHHHHHHHHHHHHHHHH
Confidence                   38999999999999998754

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=8.3e-33  Score=224.85  Aligned_cols=167  Identities=25%  Similarity=0.274  Sum_probs=149.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888777665     4567889999999999999999999


Q ss_pred             hhcCCccEEEECCccCCC----CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          106 IQHHQLNILINNAGIMGT----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.++++|+||||||+..+    ..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.++
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~  155 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-----GGGAIVNISSATAHAAYDM  155 (271)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSBCSS
T ss_pred             HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCHHHcCCCCC
Confidence            999999999999998632    3477999999999999999999999999999886     6799999999999887554


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       156 ~----------~~Y~asKaa~~~l~~~la~e  176 (271)
T 3tzq_B          156 S----------TAYACTKAAIETLTRYVATQ  176 (271)
T ss_dssp             C----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             C----------hHHHHHHHHHHHHHHHHHHH
Confidence            3          38999999999999998764

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.2e-32  Score=223.04  Aligned_cols=185  Identities=20%  Similarity=0.221  Sum_probs=159.2

Q ss_pred             CCCCCCCccccCCCCCCCCCEEEEeCCC-CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           13 GFSASSTAEEVTDGIDGSGLTAIVTGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~k~~lItG~s-~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      .++....+..+..+..+++|++|||||+ +|||.+++++|+++|++|++++|+.+++++..+++.... +.++.++++|+
T Consensus         4 ~~~~~~~~~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl   82 (266)
T 3o38_A            4 SMNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDV   82 (266)
T ss_dssp             --CTTSCCCCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCT
T ss_pred             CcccccCccccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCC
Confidence            3444445555666777999999999998 599999999999999999999999988888888886543 56899999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEE
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~  169 (216)
                      +|+++++++++++.+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++    ..+|+||+
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~  158 (266)
T 3o38_A           83 TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGV----DHGGVIVN  158 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS----SCCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCCeEEEE
Confidence            9999999999999999999999999999863  44578999999999999999999999999999864    24689999


Q ss_pred             EcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          170 VSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       170 isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +||..+..+.++.          ..|+.||+++++|++.++..
T Consensus       159 ~sS~~~~~~~~~~----------~~Y~~sKaa~~~~~~~la~e  191 (266)
T 3o38_A          159 NASVLGWRAQHSQ----------SHYAAAKAGVMALTRCSAIE  191 (266)
T ss_dssp             ECCGGGTCCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCHHHcCCCCCC----------chHHHHHHHHHHHHHHHHHH
Confidence            9999998875543          48999999999999988764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-33  Score=222.82  Aligned_cols=163  Identities=20%  Similarity=0.125  Sum_probs=142.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+.+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            45799999999999999999999999999999999988877776665     2358999999999999999999999999


Q ss_pred             CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|+++      +|+||++||..+..+.++.    
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~----  145 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER------GGVLANVLSSAAQVGKANE----  145 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------CEEEEEECCEECCSSCSSH----
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHHhcCCCCCC----
Confidence            9999999999986  355678999999999999999999999999999874      5699999999998876554    


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ..|+.||+++++|++.++..
T Consensus       146 ------~~Y~asKaa~~~~~~~la~e  165 (235)
T 3l6e_A          146 ------SLYCASKWGMRGFLESLRAE  165 (235)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ------cHHHHHHHHHHHHHHHHHHH
Confidence                  38999999999999998764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.3e-33  Score=228.47  Aligned_cols=169  Identities=20%  Similarity=0.195  Sum_probs=153.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3488999999999999999999999999999999999999888888888765  56799999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     + .|+||++||.++..+.++..
T Consensus       105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~~  179 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ-----GTGGHIAFTASFAGLVPNAGLG  179 (301)
T ss_dssp             HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----CSCEEEEEECCGGGTSCCTTBH
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCcEEEEeCchhhcCCCCCch
Confidence            9999999999999863  45578999999999999999999999999999886     3 68999999999988765543


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                .|+.||+++++|++.++..
T Consensus       180 ----------~Y~asKaa~~~~~~~la~e  198 (301)
T 3tjr_A          180 ----------TYGVAKYGVVGLAETLARE  198 (301)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH
Confidence                      8999999999999988754

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.1e-33  Score=227.21  Aligned_cols=169  Identities=15%  Similarity=0.153  Sum_probs=149.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-------chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-------AGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+       .+++..+++...  +.++.++++|++|++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHH
Confidence            4588999999999999999999999999999999999976       455666666655  5789999999999999999


Q ss_pred             HHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          100 FASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      +++++.+.++++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|+++     +.|+||++||..+..
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~  157 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-----DNPHILTLSPPIRLE  157 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-----SSCEEEECCCCCCCS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECChhhcc
Confidence            9999999999999999999986  356678999999999999999999999999999876     678999999998887


Q ss_pred             cc-cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AY-HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~-~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +. ++          ...|+.||+++++|++.++..
T Consensus       158 ~~~~~----------~~~Y~asKaal~~~~~~la~e  183 (285)
T 3sc4_A          158 PKWLR----------PTPYMMAKYGMTLCALGIAEE  183 (285)
T ss_dssp             GGGSC----------SHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC----------CchHHHHHHHHHHHHHHHHHH
Confidence            64 22          248999999999999998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.8e-33  Score=227.48  Aligned_cols=172  Identities=23%  Similarity=0.234  Sum_probs=148.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.++|++|+++|++|++++|+.+++++..+++.... +..+.++++|++|+++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988888888886653 34568999999999999999999999


Q ss_pred             hcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|+||||||+.   .+..+.+.++|++++++|+.+++.+++.++|.|.++.   .++|+||++||..+..+.++. 
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~~~g~IV~isS~~~~~~~~~~-  183 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQT---PRGGRIINNGSISAQTPRPNS-  183 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS---SCCEEEEEECCGGGTCCCTTC-
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCCcEEEEECCHHhCCCCCCC-
Confidence            999999999999985   3456789999999999999999999999999998751   126899999999998875544 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       184 ---------~~Y~asKaa~~~l~~~la~e  203 (281)
T 4dry_A          184 ---------APYTATKHAITGLTKSTALD  203 (281)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHH
Confidence                     38999999999999998754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=6.8e-33  Score=222.24  Aligned_cols=167  Identities=23%  Similarity=0.235  Sum_probs=148.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +.+|++|||||++|||.+++++|+++|++|++++++. +..++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999998754 6667777777654  567899999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++++++.++|.|.++     +.|+||++||..+..+.++.   
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~---  151 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-----RSGAIINLSSVVGAVGNPGQ---  151 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCTTC---
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcCCCCCC---
Confidence            999999999999863  45678999999999999999999999999999886     68999999999998875543   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       152 -------~~Y~~sK~a~~~~~~~la~e  171 (246)
T 3osu_A          152 -------ANYVATKAGVIGLTKSAARE  171 (246)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -------hHHHHHHHHHHHHHHHHHHH
Confidence                   38999999999999998763

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5e-33  Score=226.74  Aligned_cols=170  Identities=21%  Similarity=0.209  Sum_probs=151.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +..++++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~  104 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERA  104 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHH
Confidence            446789999999999999999999999999999999999999998888888765  677999999999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+. +++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.++ 
T Consensus       105 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~~~~~-  177 (275)
T 4imr_A          105 EAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-----KWGRVVSIGSINQLRPKSV-  177 (275)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT-
T ss_pred             HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCCCCCC-
Confidence            877 9999999999986  345678999999999999999999999999999887     6799999999988774333 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ...|+.||+++++|++.++..
T Consensus       178 ---------~~~Y~asKaa~~~l~~~la~e  198 (275)
T 4imr_A          178 ---------VTAYAATKAAQHNLIQSQARD  198 (275)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------chhhHHHHHHHHHHHHHHHHH
Confidence                     347999999999999988754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.3e-32  Score=222.65  Aligned_cols=170  Identities=28%  Similarity=0.353  Sum_probs=152.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +..+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999888888888765  5689999999999999999999999


Q ss_pred             hhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|+||||||+.   .+..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  176 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-----KRGHIINISSLAGKNPVADG  176 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCEEEEECSSCSSCCCTTC
T ss_pred             HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCceEEEEechhhcCCCCCC
Confidence            9999999999999983   355678999999999999999999999999999876     67899999999998775544


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       177 ----------~~Y~asKaa~~~l~~~la~e  196 (262)
T 3rkr_A          177 ----------AAYTASKWGLNGLMTSAAEE  196 (262)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------chHHHHHHHHHHHHHHHHHH
Confidence                      48999999999999988754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.7e-32  Score=221.57  Aligned_cols=170  Identities=26%  Similarity=0.257  Sum_probs=150.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA   81 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999988887777777654  5678999999999999999999999


Q ss_pred             hhc-CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQH-HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~-~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.+ +++|+||||||+..  +..+.+.++|++++++|+.+++.++++++|.|.++     +.|+||++||..+..+.++.
T Consensus        82 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  156 (260)
T 2ae2_A           82 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----ERGNVVFISSVSGALAVPYE  156 (260)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----SSEEEEEECCGGGTSCCTTC
T ss_pred             HHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhccCCCCc
Confidence            999 89999999999863  44577899999999999999999999999999875     57899999999887764433


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||++++++++.++..
T Consensus       157 ----------~~Y~~sK~a~~~~~~~la~e  176 (260)
T 2ae2_A          157 ----------AVYGATKGAMDQLTRCLAFE  176 (260)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------chHHHHHHHHHHHHHHHHHH
Confidence                      48999999999999988753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=8e-33  Score=225.27  Aligned_cols=169  Identities=18%  Similarity=0.192  Sum_probs=148.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-------hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      +++++|++|||||++|||.++|++|+++|++|++++|+.++       +++..+++...  +.++.++++|++|++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            46789999999999999999999999999999999998764       45555666554  6789999999999999999


Q ss_pred             HHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          100 FASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      +++++.+.++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|+|+++     +.|+||++||..+..
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~  154 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-----PNPHILTLAPPPSLN  154 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-----SSCEEEECCCCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-----CCceEEEECChHhcC
Confidence            99999999999999999999863  45578999999999999999999999999999876     679999999998887


Q ss_pred             c--ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 A--YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~--~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +  .++.          ..|+.||+++++|++.++..
T Consensus       155 ~~~~~~~----------~~Y~asKaal~~l~~~la~e  181 (274)
T 3e03_A          155 PAWWGAH----------TGYTLAKMGMSLVTLGLAAE  181 (274)
T ss_dssp             HHHHHHC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCC----------chHHHHHHHHHHHHHHHHHH
Confidence            6  3333          37999999999999998764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.8e-33  Score=224.53  Aligned_cols=178  Identities=23%  Similarity=0.237  Sum_probs=150.4

Q ss_pred             CCCCccccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           16 ASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        16 ~~~~~~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      .......|+....+++|++|||||++|||.+++++|+++|++|++++++. +..++..+++...  +.++.++++|++|+
T Consensus        16 ~~~~~~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~   93 (271)
T 3v2g_A           16 ENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDA   93 (271)
T ss_dssp             ----CHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             cccchhhhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCH
Confidence            33344456667789999999999999999999999999999999997765 5566667776654  56789999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      ++++++++++.+.+|++|+||||||+.  .+..+.+.++|++.+++|+.+++.+++.++|.|++       .|+||++||
T Consensus        94 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-------~g~iv~isS  166 (271)
T 3v2g_A           94 EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGS  166 (271)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEeC
Confidence            999999999999999999999999986  35567899999999999999999999999999963       689999999


Q ss_pred             Cccccc-ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          173 EGHRLA-YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       173 ~~~~~~-~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+..+ .+          ....|+.||+++++|++.++..
T Consensus       167 ~~~~~~~~~----------~~~~Y~asKaa~~~l~~~la~e  197 (271)
T 3v2g_A          167 NLAELVPWP----------GISLYSASKAALAGLTKGLARD  197 (271)
T ss_dssp             GGGTCCCST----------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccCCCC----------CchHHHHHHHHHHHHHHHHHHH
Confidence            777654 23          3348999999999999998754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-32  Score=222.59  Aligned_cols=177  Identities=19%  Similarity=0.283  Sum_probs=149.3

Q ss_pred             ccccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           20 AEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        20 ~~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      .....+...+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... +.++.++++|++|++++++
T Consensus        10 ~~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~   88 (267)
T 1vl8_A           10 HHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKK   88 (267)
T ss_dssp             -------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHH
Confidence            334455667889999999999999999999999999999999999888777777763333 4578899999999999999


Q ss_pred             HHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc-cc
Q 027991          100 FASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG-HR  176 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~  176 (216)
                      +++++.+.++++|+||||||+..  +..+.+.++|++++++|+.+++.++++++|.|+++     +.|+||++||.. +.
T Consensus        89 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~  163 (267)
T 1vl8_A           89 LLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----DNPSIINIGSLTVEE  163 (267)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SSCEEEEECCGGGTC
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECCcchhc
Confidence            99999999999999999999863  45577899999999999999999999999999875     578999999988 76


Q ss_pred             ccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          177 LAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+.++          ...|+.||+++++|++.++..
T Consensus       164 ~~~~~----------~~~Y~asK~a~~~~~~~la~e  189 (267)
T 1vl8_A          164 VTMPN----------ISAYAASKGGVASLTKALAKE  189 (267)
T ss_dssp             CCSSS----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCC----------ChhHHHHHHHHHHHHHHHHHH
Confidence            65433          348999999999999988654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-32  Score=222.30  Aligned_cols=169  Identities=27%  Similarity=0.349  Sum_probs=150.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.+++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...+++..+.++.+|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            345688999999999999999999999999999999999999999999999888777789999999999999887764  


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                        .++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.
T Consensus        82 --~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  154 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-----KEGRVIFIASEAAIMPSQEM  154 (267)
T ss_dssp             --HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TEEEEEEECCGGGTSCCTTC
T ss_pred             --hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEEcchhhccCCCcc
Confidence              4689999999999863  45578899999999999999999999999999886     67999999999998875543


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       155 ----------~~Y~asKaa~~~l~~~la~e  174 (267)
T 3t4x_A          155 ----------AHYSATKTMQLSLSRSLAEL  174 (267)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHH
Confidence                      48999999999999998754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.1e-32  Score=227.29  Aligned_cols=171  Identities=23%  Similarity=0.204  Sum_probs=148.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC------------CcchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      +.++++|++|||||++|||.++|+.|+++|++|++++|+            .+.+++..+++...  +.++.++++|++|
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d  118 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRD  118 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            456889999999999999999999999999999999886            34455555555544  5689999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEc
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  171 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~is  171 (216)
                      +++++++++++.+.++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|.|.++    +.+|+||++|
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~----~~~g~Iv~is  194 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIER----GQGGSVIFVS  194 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----CSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CCCCEEEEEC
Confidence            99999999999999999999999999863  55688999999999999999999999999999875    1368999999


Q ss_pred             CCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          172 SEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |..+..+.++.          ..|+.||+++++|++.++..
T Consensus       195 S~~~~~~~~~~----------~~Y~asKaa~~~l~~~la~e  225 (317)
T 3oec_A          195 STVGLRGAPGQ----------SHYAASKHGVQGLMLSLANE  225 (317)
T ss_dssp             CGGGSSCCTTB----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHhcCCCCCC----------cchHHHHHHHHHHHHHHHHH
Confidence            99998876544          38999999999999998764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=3.5e-32  Score=219.99  Aligned_cols=170  Identities=21%  Similarity=0.276  Sum_probs=150.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...+ +.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888777777776543 35688999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||+.  .+..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++   
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~---  153 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-----GGGAIIHNASICAVQPLWY---  153 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT---
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcCCCCC---
Confidence            999999999999986  345678999999999999999999999999999876     5789999999988876443   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.||++++++++.++..
T Consensus       154 -------~~~Y~~sK~a~~~~~~~la~e  174 (263)
T 3ai3_A          154 -------EPIYNVTKAALMMFSKTLATE  174 (263)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cchHHHHHHHHHHHHHHHHHH
Confidence                   348999999999999998754

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.1e-32  Score=222.87  Aligned_cols=169  Identities=17%  Similarity=0.134  Sum_probs=140.3

Q ss_pred             ccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        22 ~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ..+.++++++|++|||||++|||.++++.|+++|++|++++|+.++..+.   +...    .+.++.+|++|++++++++
T Consensus        18 ~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~----~~~~~~~Dv~~~~~v~~~~   90 (260)
T 3gem_A           18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA----GAVALYGDFSCETGIMAFI   90 (260)
T ss_dssp             ---------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH----TCEEEECCTTSHHHHHHHH
T ss_pred             ccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc----CCeEEECCCCCHHHHHHHH
Confidence            33456778999999999999999999999999999999999998765333   2222    2678999999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          102 SEYNIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +++.+.++++|+||||||+... ..+.+.++|++++++|+.+++++++.++|+|.++     +.|+||++||..+..+.+
T Consensus        91 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~  165 (260)
T 3gem_A           91 DLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-----EVADIVHISDDVTRKGSS  165 (260)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGTCCS
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcEEEEECChhhcCCCC
Confidence            9999999999999999998632 3466789999999999999999999999999875     579999999999988755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       166 ~~----------~~Y~asKaa~~~l~~~la~e  187 (260)
T 3gem_A          166 KH----------IAYCATKAGLESLTLSFAAR  187 (260)
T ss_dssp             SC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             Cc----------HhHHHHHHHHHHHHHHHHHH
Confidence            44          38999999999999998754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-32  Score=220.86  Aligned_cols=170  Identities=22%  Similarity=0.222  Sum_probs=151.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   93 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA   93 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999988887777777654  5678899999999999999999999


Q ss_pred             hhc-CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQH-HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~-~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.+ +++|+||||||+.  .+..+.+.++|++.+++|+.+++.++++++|.|+++     +.|+||++||..+..+.++.
T Consensus        94 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~~  168 (273)
T 1ae1_A           94 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFSALPSV  168 (273)
T ss_dssp             HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTSCCTTC
T ss_pred             HHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHhhcCCCCCc
Confidence            999 9999999999986  355678999999999999999999999999999876     57999999999988765443


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       169 ----------~~Y~asK~a~~~~~~~la~e  188 (273)
T 1ae1_A          169 ----------SLYSASKGAINQMTKSLACE  188 (273)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------chhHHHHHHHHHHHHHHHHH
Confidence                      48999999999999998754

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-32  Score=219.18  Aligned_cols=168  Identities=26%  Similarity=0.327  Sum_probs=152.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            477999999999999999999999999999999999998888888887765  567999999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|++|||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.   
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~---  151 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-----RWGRIISIGSVVGSAGNPGQ---  151 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTTC---
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhccCCCCc---
Confidence            999999999999873  44578999999999999999999999999999886     67999999999998875543   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       152 -------~~Y~~sK~a~~~~~~~la~e  171 (247)
T 3lyl_A          152 -------TNYCAAKAGVIGFSKSLAYE  171 (247)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHHHH
Confidence                   38999999999999988754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=3.6e-32  Score=221.42  Aligned_cols=171  Identities=27%  Similarity=0.305  Sum_probs=146.8

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      |....++++|++|||||++|||.++|++|+++|++|++++|+ +..++..+++...  +.++.++++|++|+++++++.+
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~   99 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVAE   99 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHH
Confidence            344567899999999999999999999999999999999965 4556666666554  5789999999999999999954


Q ss_pred             HHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          103 EYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      . .+.++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.++     +.|+||++||..+..+.+
T Consensus       100 ~-~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~~~  173 (273)
T 3uf0_A          100 E-LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-----GSGRIVTIASMLSFQGGR  173 (273)
T ss_dssp             H-HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCS
T ss_pred             H-HHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchHhcCCCC
Confidence            4 45678999999999986  345678999999999999999999999999999987     679999999999988755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       174 ~~----------~~Y~asKaa~~~l~~~la~e  195 (273)
T 3uf0_A          174 NV----------AAYAASKHAVVGLTRALASE  195 (273)
T ss_dssp             SC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CC----------hhHHHHHHHHHHHHHHHHHH
Confidence            54          38999999999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=6e-33  Score=223.86  Aligned_cols=165  Identities=23%  Similarity=0.273  Sum_probs=146.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +.++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAG   77 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999987777666555     4578999999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|+||||||+.  .+..+.+.++|++.+++|+.+++.+++.++|+|++       +|+||++||..+..+.++. 
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~-  149 (255)
T 4eso_A           78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-------GGSIVFTSSVADEGGHPGM-  149 (255)
T ss_dssp             HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCGGGSSBCTTB-
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCEEEEECChhhcCCCCCc-
Confidence            9999999999999986  34567899999999999999999999999999864       5899999999998876544 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       150 ---------~~Y~asKaa~~~~~~~la~e  169 (255)
T 4eso_A          150 ---------SVYSASKAALVSFASVLAAE  169 (255)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHH
Confidence                     38999999999999998764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.6e-32  Score=226.88  Aligned_cols=177  Identities=22%  Similarity=0.209  Sum_probs=155.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +.++.+|++|||||++|||.+++++|+++|++|++++|+.+++++..+++....++.++.++.+|++|+++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999998888888776544589999999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-cCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|+||||||+.  .+..+.+.+++++++++|+.|++.+++.++|.|.++.. ...+.|+||++||.++..+.++.
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~  162 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP  162 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred             HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence            9999999999999986  35567899999999999999999999999999987421 11247899999999999876654


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          .|+.||+++++|++.++..
T Consensus       163 ~----------~Y~aSKaal~~~~~~la~e  182 (319)
T 3ioy_A          163 G----------IYNTTKFAVRGLSESLHYS  182 (319)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHHH
T ss_pred             H----------HHHHHHHHHHHHHHHHHHH
Confidence            3          8999999999999988653

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-32  Score=221.94  Aligned_cols=171  Identities=22%  Similarity=0.181  Sum_probs=140.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++     +.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988877666555     35688999999999999999999999


Q ss_pred             hcCCccEEEECCccCCCC------CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCcEEEEEcCCcccccc
Q 027991          107 QHHQLNILINNAGIMGTP------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~  179 (216)
                      .++++|+||||||+..+.      .+.+.++|++.+++|+.+++.++++++|.|.++... ..+.|+||++||..+..+.
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence            999999999999986422      256889999999999999999999999999874211 1257899999999998876


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++.          ..|+.||+++++|++.++..
T Consensus       158 ~~~----------~~Y~asKaa~~~~~~~la~e  180 (257)
T 3tpc_A          158 IGQ----------AAYAASKGGVAALTLPAARE  180 (257)
T ss_dssp             TTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC----------cchHHHHHHHHHHHHHHHHH
Confidence            544          38999999999999988754

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=2e-32  Score=219.39  Aligned_cols=167  Identities=25%  Similarity=0.287  Sum_probs=147.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++|+++||||++|||.+++++|+++|++|++++| +.++.++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999 767777777777654  457889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++    
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~----  150 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-----RHGRIVNIASVVGVTGNPG----  150 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTT----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHhcCCCCC----
Confidence            999999999999863  44577899999999999999999999999999876     5789999999988876543    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||++++++++.++..
T Consensus       151 ------~~~Y~asK~a~~~~~~~la~e  171 (246)
T 2uvd_A          151 ------QANYVAAKAGVIGLTKTSAKE  171 (246)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999988754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-32  Score=224.34  Aligned_cols=173  Identities=24%  Similarity=0.269  Sum_probs=144.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +..+.+|++|||||++|||.++++.|+++|++|++++| +.+.+++..+++...  +.++.++++|++|+++++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999996 666677777777654  568999999999999999999999


Q ss_pred             HhhcCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          105 NIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      .+.++++|+||||||+.    .+..+.+.++|++++++|+.++++++++++|.|.++.  ....|+||++||..+..+.+
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~~~~g~Iv~isS~~~~~~~~  179 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASD--ARASRSIINITSVSAVMTSP  179 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHC--CCCCEEEEEECCC-------
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhC--CCCCCEEEEEcchhhccCCC
Confidence            99999999999999983    3556789999999999999999999999999998861  11368999999999988765


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +..          .|+.||+++++|++.++..
T Consensus       180 ~~~----------~Y~asKaa~~~l~~~la~e  201 (280)
T 4da9_A          180 ERL----------DYCMSKAGLAAFSQGLALR  201 (280)
T ss_dssp             CCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             Ccc----------HHHHHHHHHHHHHHHHHHH
Confidence            543          8999999999999998754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=3e-32  Score=222.09  Aligned_cols=173  Identities=19%  Similarity=0.164  Sum_probs=146.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC------------CcchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+            .+.+++..+++...  +.++.++++|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            356889999999999999999999999999999999987            45555555655554  5689999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      +++++++++++.+.++++|+||||||+.....  +.++|++++++|+.++++++++++|.|.++    +.+|+||++||.
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~g~iv~isS~  159 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ----GTGGSIVLISSS  159 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHHHHH----CSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCCcEEEEEccH
Confidence            99999999999999999999999999864322  689999999999999999999999999876    136899999999


Q ss_pred             cccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          174 GHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+..+....      ......|+.||+++++|++.++..
T Consensus       160 ~~~~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e  192 (278)
T 3sx2_A          160 AGLAGVGSA------DPGSVGYVAAKHGVVGLMRVYANL  192 (278)
T ss_dssp             GGTSCCCCS------SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCccC------CCCchHhHHHHHHHHHHHHHHHHH
Confidence            988764211      122347999999999999998754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=6e-32  Score=227.01  Aligned_cols=173  Identities=17%  Similarity=0.192  Sum_probs=150.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-------hHHHHHHHHhhcCCCeEEEEEccCCCHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-------GKDVKETIVKEIPSAKVDAMELDLSSLASV   97 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   97 (216)
                      ....++||++|||||++|||.+++++|+++|++|++++|+.++       +++..+++...  +.++.++++|++|++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHH
Confidence            4567899999999999999999999999999999999999775       44556666554  67899999999999999


Q ss_pred             HHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991           98 RNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus        98 ~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +++++++.+.++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|+|+++     +.|+||++||..+
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~g~IV~iSS~~~  191 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-----KVAHILNISPPLN  191 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-----SSCEEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----CCCEEEEECCHHH
Confidence            999999999999999999999986  356678999999999999999999999999999876     6799999999988


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+.+        ......|+.||+++++|++.++..
T Consensus       192 ~~~~~--------~~~~~~Y~aSKaal~~l~~~la~e  220 (346)
T 3kvo_A          192 LNPVW--------FKQHCAYTIAKYGMSMYVLGMAEE  220 (346)
T ss_dssp             CCGGG--------TSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCC--------CCCchHHHHHHHHHHHHHHHHHHH
Confidence            77521        123448999999999999988753

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-32  Score=220.92  Aligned_cols=168  Identities=20%  Similarity=0.194  Sum_probs=149.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988887777777654  557889999999999999999999999


Q ss_pred             cCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|+||||||+.   .+..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.  
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~--  154 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVKGPPNM--  154 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHSCCTTB--
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhccCCCCC--
Confidence            99999999999975   345578999999999999999999999999999876     57899999999888765443  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.||+++++|++.++..
T Consensus       155 --------~~Y~asK~a~~~~~~~la~e  174 (262)
T 1zem_A          155 --------AAYGTSKGAIIALTETAALD  174 (262)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------chHHHHHHHHHHHHHHHHHH
Confidence                    48999999999999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.4e-32  Score=221.07  Aligned_cols=170  Identities=19%  Similarity=0.257  Sum_probs=146.8

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .+..++++|++|||||++|||.+++++|+++|++|++++++. +..++..+++...  +.++.++++|++|+++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHH
Confidence            334568999999999999999999999999999999988754 4566667777654  5678999999999999999999


Q ss_pred             HHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc-ccccc
Q 027991          103 EYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG-HRLAY  179 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~~  179 (216)
                      ++.++++++|+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.+       +|+||++||.. +..+.
T Consensus        89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  161 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-------GGRIVLTSSNTSKDFSV  161 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCTTTTTCCC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCeEEEEeCchhccCCC
Confidence            9999999999999999986  34567899999999999999999999999999974       68999999987 44443


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++          ...|+.||+++++|++.++..
T Consensus       162 ~~----------~~~Y~asKaa~~~~~~~la~e  184 (270)
T 3is3_A          162 PK----------HSLYSGSKGAVDSFVRIFSKD  184 (270)
T ss_dssp             TT----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC----------CchhHHHHHHHHHHHHHHHHH
Confidence            33          348999999999999998754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=4.3e-32  Score=219.16  Aligned_cols=168  Identities=29%  Similarity=0.288  Sum_probs=148.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++|++|||||++|||.++++.|+++|++|++++|+.+. +++..+++...+ +.++.++++|++|+++++++++++.+.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999999877 777777765542 346889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++    
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~----  151 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLVASAN----  151 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECcHHhCcCCCC----
Confidence            999999999999863  44577899999999999999999999999999876     5799999999988876543    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||+++++|++.++..
T Consensus       152 ------~~~Y~~sK~a~~~~~~~la~e  172 (260)
T 1x1t_A          152 ------KSAYVAAKHGVVGFTKVTALE  172 (260)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999988754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=6.2e-32  Score=220.33  Aligned_cols=168  Identities=26%  Similarity=0.331  Sum_probs=149.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.++++.|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988887777777654  457889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHH--HHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDT--MKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|.  |.++     +.|+||++||..+..+.++  
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~--  169 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQGVVH--  169 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-----TEEEEEEECCGGGTSCCTT--
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-----CCeEEEEECccccccCCCC--
Confidence            999999999999863  4457889999999999999999999999999  8876     5689999999988876443  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||+++++|++.++..
T Consensus       170 --------~~~Y~asK~a~~~~~~~la~e  190 (277)
T 2rhc_B          170 --------AAPYSASKHGVVGFTKALGLE  190 (277)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CccHHHHHHHHHHHHHHHHHH
Confidence                    348999999999999998754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=7.4e-32  Score=217.81  Aligned_cols=170  Identities=16%  Similarity=0.175  Sum_probs=149.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...+++.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888887777776543344788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++ +|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++   
T Consensus        83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~---  153 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-----GWGRMVYIGSVTLLRPWQD---  153 (260)
T ss_dssp             TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT---
T ss_pred             hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhcCCCCC---
Confidence            998 999999999863  44577899999999999999999999999999876     5799999999988876443   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.||++++++++.++..
T Consensus       154 -------~~~Y~~sK~a~~~~~~~la~e  174 (260)
T 2z1n_A          154 -------LALSNIMRLPVIGVVRTLALE  174 (260)
T ss_dssp             -------BHHHHHHTHHHHHHHHHHHHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHH
Confidence                   348999999999999988754

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-32  Score=222.34  Aligned_cols=169  Identities=28%  Similarity=0.303  Sum_probs=143.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ..+++++|++|||||++|||.++|++|+++|++|+++++ +.+..++..+++...  +.++.++++|++|++++++++++
T Consensus        21 ~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~   98 (267)
T 3u5t_A           21 QSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFAT   98 (267)
T ss_dssp             ------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHH
Confidence            334578999999999999999999999999999999854 555666666666554  56789999999999999999999


Q ss_pred             HHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+.++++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|++       +|+||++||..+..+.++
T Consensus        99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  171 (267)
T 3u5t_A           99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------GGRIINMSTSQVGLLHPS  171 (267)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCTHHHHCCTT
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCeEEEEeChhhccCCCC
Confidence            999999999999999986  34567899999999999999999999999999964       589999999988877554


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       172 ~----------~~Y~asKaa~~~l~~~la~e  192 (267)
T 3u5t_A          172 Y----------GIYAAAKAGVEAMTHVLSKE  192 (267)
T ss_dssp             C----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             c----------hHHHHHHHHHHHHHHHHHHH
Confidence            4          38999999999999998764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=3.8e-32  Score=220.51  Aligned_cols=163  Identities=20%  Similarity=0.232  Sum_probs=142.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+.+|++|||||++|||.+++++|+++|++|++++|+.+++++.        ...++.++++|++|+++++++++++.+
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRAEK   83 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999986654322        134688999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||+.  .+..+.+.++|++++++|+.+++.++++++|.|+++     +.|+||++||.++..+.++.  
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~IV~isS~~~~~~~~~~--  156 (266)
T 3p19_A           84 IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-----NCGTIINISSIAGKKTFPDH--  156 (266)
T ss_dssp             HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCTTC--
T ss_pred             HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhCCCCCCC--
Confidence            999999999999986  356678999999999999999999999999999986     67999999999998875544  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.||+++++|++.++..
T Consensus       157 --------~~Y~asK~a~~~~~~~la~e  176 (266)
T 3p19_A          157 --------AAYCGTKFAVHAISENVREE  176 (266)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------chHHHHHHHHHHHHHHHHHH
Confidence                    38999999999999998764

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=9.3e-32  Score=215.99  Aligned_cols=165  Identities=24%  Similarity=0.270  Sum_probs=144.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+. +++++   ++...  +.++.++++|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999997 55443   33322  45788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++   
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~---  150 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWLKIEA---  150 (249)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGSCCSS---
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhccCCCC---
Confidence            9999999999999863  45578999999999999999999999999999876     5799999999988876544   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.||+++++|++.++..
T Consensus       151 -------~~~Y~asK~a~~~~~~~la~e  171 (249)
T 2ew8_A          151 -------YTHYISTKAANIGFTRALASD  171 (249)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------chhHHHHHHHHHHHHHHHHHH
Confidence                   348999999999999998654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=9e-32  Score=216.56  Aligned_cols=170  Identities=23%  Similarity=0.223  Sum_probs=147.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE-cCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ....++|++|||||++|||.+++++|+++|++|++++ |+.+..++..+++...  +.++.++++|++|+++++++++++
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHHH
Confidence            3457789999999999999999999999999999988 6666777777777655  567899999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.
T Consensus        86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  160 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQKGQFGQ  160 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCGGGSCSCC
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhccCCCCC
Confidence            999999999999999863  45678999999999999999999999999999987     67999999999998875544


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       161 ----------~~Y~asK~a~~~~~~~la~e  180 (256)
T 3ezl_A          161 ----------TNYSTAKAGIHGFTMSLAQE  180 (256)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------cccHHHHHHHHHHHHHHHHH
Confidence                      38999999999999988764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=7.1e-32  Score=217.84  Aligned_cols=170  Identities=25%  Similarity=0.273  Sum_probs=149.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   86 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAV   86 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988877777777654  4578899999999999999999999


Q ss_pred             hhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|+||||||+.   .+..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++ 
T Consensus        87 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~-  160 (260)
T 2zat_A           87 NLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-----GGGSVLIVSSVGAYHPFPN-  160 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSCCTT-
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEechhhcCCCCC-
Confidence            9999999999999975   345577899999999999999999999999999875     5789999999988876443 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ...|+.||+++++|++.++..
T Consensus       161 ---------~~~Y~~sK~a~~~~~~~la~e  181 (260)
T 2zat_A          161 ---------LGPYNVSKTALLGLTKNLAVE  181 (260)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHH
Confidence                     348999999999999998653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=5.8e-32  Score=218.98  Aligned_cols=180  Identities=21%  Similarity=0.236  Sum_probs=155.5

Q ss_pred             CccccCCCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcch-HHHHHHHHhhcCCCeEEEEEccCCCHH
Q 027991           19 TAEEVTDGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKEIPSAKVDAMELDLSSLA   95 (216)
Q Consensus        19 ~~~~~~~~~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~   95 (216)
                      ....+++..++++|++|||||+  +|||.+++++|+++|++|++++|+.+.. ++..+++...+ +.++.++++|++|++
T Consensus         8 ~~~~~~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~   86 (267)
T 3gdg_A            8 KHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYE   86 (267)
T ss_dssp             SCSSHHHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHH
T ss_pred             CCcccccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHH
Confidence            3344455677999999999999  9999999999999999999999887665 66777776655 567999999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991           96 SVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      +++++++++.+.++++|+||||||+..  +..+.+.++|++.+++|+.+++++++.++|.|.++     +.|+||++||.
T Consensus        87 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~  161 (267)
T 3gdg_A           87 SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-----GTGSLVITASM  161 (267)
T ss_dssp             HHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-----CCceEEEEccc
Confidence            999999999999999999999999863  45678999999999999999999999999999987     67999999999


Q ss_pred             cccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          174 GHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+..+.+.        .....|+.||+++++|++.++..
T Consensus       162 ~~~~~~~~--------~~~~~Y~~sK~a~~~~~~~la~e  192 (267)
T 3gdg_A          162 SGHIANFP--------QEQTSYNVAKAGCIHMARSLANE  192 (267)
T ss_dssp             GGTSCCSS--------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCC--------CCCCcchHHHHHHHHHHHHHHHH
Confidence            88775321        23458999999999999998764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=6.7e-32  Score=221.68  Aligned_cols=170  Identities=21%  Similarity=0.208  Sum_probs=146.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ...++++|++|||||++|||.+++++|+++|++|++++|+.+...+...+..... +.++.++++|++|+++++++++++
T Consensus        41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999999765433333333332 568999999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          105 NIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      .++++++|+||||||...   +..+.+.++|++++++|+.+++.++++++|+|++       .|+||++||..+..+.++
T Consensus       120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  192 (291)
T 3ijr_A          120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-------GDVIINTASIVAYEGNET  192 (291)
T ss_dssp             HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-------TCEEEEECCTHHHHCCTT
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCEEEEEechHhcCCCCC
Confidence            999999999999999863   3456799999999999999999999999999963       679999999999887554


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       193 ~----------~~Y~asKaa~~~l~~~la~e  213 (291)
T 3ijr_A          193 L----------IDYSATKGAIVAFTRSLSQS  213 (291)
T ss_dssp             C----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             C----------hhHHHHHHHHHHHHHHHHHH
Confidence            4          38999999999999998754

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=9.3e-32  Score=215.30  Aligned_cols=171  Identities=26%  Similarity=0.268  Sum_probs=150.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC--CCHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL--SSLASVRNFASE  103 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv--~~~~~~~~~~~~  103 (216)
                      ...+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... ..+..++.+|+  ++.+++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHH
Confidence            345889999999999999999999999999999999999998888888887653 34566677766  999999999999


Q ss_pred             HHhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          104 YNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +.+.++++|+||||||+..   +..+.+.++|++.+++|+.+++.+++.++|+|+++     +.|+||++||..+..+.+
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~  162 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-----EDASIAFTSSSVGRKGRA  162 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSEEEEEECCGGGTSCCT
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCeEEEEcchhhcCCCC
Confidence            9999999999999999853   45578999999999999999999999999999875     578999999999888755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       163 ~~----------~~Y~~sK~a~~~~~~~la~e  184 (247)
T 3i1j_A          163 NW----------GAYGVSKFATEGLMQTLADE  184 (247)
T ss_dssp             TC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             Cc----------chhHHHHHHHHHHHHHHHHH
Confidence            44          38999999999999988764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.8e-32  Score=220.35  Aligned_cols=168  Identities=21%  Similarity=0.148  Sum_probs=146.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.++++|++|||||++|||.+++++|+++|++|+++ +++.+..++..+++...  +.++.++++|++|+++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            356889999999999999999999999999999999 55666667777777554  567889999999999999999999


Q ss_pred             HhhcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc-cccc
Q 027991          105 NIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYH  180 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~  180 (216)
                      .+.++++|+||||||..   .+..+.+.++|++++++|+.++++++++++|.|.+       +|+||++||..+. .+.+
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  153 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-------GGAIVTFSSQAGRDGGGP  153 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHCCST
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCEEEEEcCHHhccCCCC
Confidence            99999999999999975   35567899999999999999999999999999964       5899999999887 4433


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +          ...|+.||+++++|++.++..
T Consensus       154 ~----------~~~Y~asKaa~~~l~~~la~e  175 (259)
T 3edm_A          154 G----------ALAYATSKGAVMTFTRGLAKE  175 (259)
T ss_dssp             T----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             C----------cHHHHHHHHHHHHHHHHHHHH
Confidence            3          348999999999999998754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.3e-31  Score=216.12  Aligned_cols=165  Identities=19%  Similarity=0.246  Sum_probs=145.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc--hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +|++|||||++|||.+++++|+++|++|++++|+.+.  +++..+++...  +.++.++++|++|+++++++++++.+.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999877  67666666543  4578999999999999999999999999


Q ss_pred             CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCC-cEEEEEcCCcccccccCCccC
Q 027991          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       109 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     +. |+||++||..+..+.++.   
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~---  151 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL-----GVKGKIINAASIAAIQGFPIL---  151 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCCEEEEECCGGGTSCCTTC---
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCcEEEEECcchhccCCCCc---
Confidence            99999999999863  45577999999999999999999999999999876     45 899999999888765443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       152 -------~~Y~~sK~a~~~~~~~la~e  171 (258)
T 3a28_C          152 -------SAYSTTKFAVRGLTQAAAQE  171 (258)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -------hhHHHHHHHHHHHHHHHHHH
Confidence                   48999999999999988753

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-31  Score=218.50  Aligned_cols=174  Identities=27%  Similarity=0.274  Sum_probs=148.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.+++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  + ++.++++|++|+++++++++++
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~   99 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQAL   99 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999988777776666432  2 7888999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++.. ..+.|+||++||..+..+.++ 
T Consensus       100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-~~~~g~iV~isS~~~~~~~~~-  177 (276)
T 2b4q_A          100 GELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSAS-AENPARVINIGSVAGISAMGE-  177 (276)
T ss_dssp             HHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC-SSSCEEEEEECCGGGTCCCCC-
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccC-CCCCCEEEEECCHHHcCCCCC-
Confidence            999999999999999863  4567889999999999999999999999999987610 001289999999988876443 


Q ss_pred             ccCCCCCCCCc-cchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSG-SFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~-~Y~~ska~~~~l~~~~~~~  212 (216)
                               .. .|+.||+++++|++.++..
T Consensus       178 ---------~~~~Y~asK~a~~~~~~~la~e  199 (276)
T 2b4q_A          178 ---------QAYAYGPSKAALHQLSRMLAKE  199 (276)
T ss_dssp             ---------SCTTHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CccccHHHHHHHHHHHHHHHHH
Confidence                     23 7999999999999988753

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=3.7e-32  Score=226.19  Aligned_cols=176  Identities=22%  Similarity=0.189  Sum_probs=152.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC----------CcchHHHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD----------IAAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      ++..+++|++|||||++|||.++|++|+++|++|++++|+          .+..++..+++...  +.++.++++|++|+
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADW   98 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCH
Confidence            3556899999999999999999999999999999999987          66677777777665  56899999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCcEEEEEc
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVS  171 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~is  171 (216)
                      ++++++++++.+.++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|+|.++... ...+|+||++|
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is  178 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS  178 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence            9999999999999999999999999864  45678999999999999999999999999999875321 12248999999


Q ss_pred             CCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          172 SEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |..+..+.++..          .|+.||+++++|++.++..
T Consensus       179 S~~~~~~~~~~~----------~Y~asKaal~~l~~~la~e  209 (322)
T 3qlj_A          179 SGAGLQGSVGQG----------NYSAAKAGIATLTLVGAAE  209 (322)
T ss_dssp             CHHHHHCBTTCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHccCCCCCc----------cHHHHHHHHHHHHHHHHHH
Confidence            999988755443          8999999999999988754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=9.3e-32  Score=221.35  Aligned_cols=176  Identities=14%  Similarity=0.132  Sum_probs=147.7

Q ss_pred             CCCccccCCCCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           17 SSTAEEVTDGIDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        17 ~~~~~~~~~~~~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      +.-+..|.++..+++|++|||||+|  |||.+++++|+++|++|++++|+.+..+.. +++....  ..+.++++|++|+
T Consensus        16 ~~gp~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~--~~~~~~~~Dv~d~   92 (296)
T 3k31_A           16 TQGPGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRV-DPLAESL--GVKLTVPCDVSDA   92 (296)
T ss_dssp             -----CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHH--TCCEEEECCTTCH
T ss_pred             ccCCccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHH-HHHHHhc--CCeEEEEcCCCCH
Confidence            3334456667789999999999997  999999999999999999999997554443 3443443  2367899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccC------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEE
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRII  168 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv  168 (216)
                      ++++++++++.+.++++|+||||||+.      .+..+.+.++|++.+++|+.+++.+++.++|.|.+       .|+||
T Consensus        93 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~IV  165 (296)
T 3k31_A           93 ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-------GGSIL  165 (296)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCEEE
Confidence            999999999999999999999999986      34567899999999999999999999999999863       68999


Q ss_pred             EEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          169 NVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       169 ~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++||..+..+.++..          .|+.||+++++|++.++..
T Consensus       166 ~isS~~~~~~~~~~~----------~Y~asKaal~~l~~~la~e  199 (296)
T 3k31_A          166 TLSYYGAEKVVPHYN----------VMGVCKAALEASVKYLAVD  199 (296)
T ss_dssp             EEECGGGTSCCTTTT----------HHHHHHHHHHHHHHHHHHH
T ss_pred             EEEehhhccCCCCch----------hhHHHHHHHHHHHHHHHHH
Confidence            999999988755443          8999999999999998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-31  Score=215.24  Aligned_cols=166  Identities=25%  Similarity=0.275  Sum_probs=142.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888888888765  56899999999999999999999999


Q ss_pred             hcCCccEEEECCccC-----CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          107 QHHQLNILINNAGIM-----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       107 ~~~~id~li~~Ag~~-----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      .++++|+||||||+.     .+..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..    
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~----  153 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-----GGGAIVNQSSTAAWL----  153 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECC---------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECCccccC----
Confidence            999999999999984     234578999999999999999999999999999987     689999999988762    


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               +...|+.||+++++|++.++..
T Consensus       154 ---------~~~~Y~asK~a~~~~~~~la~e  175 (253)
T 3qiv_A          154 ---------YSNYYGLAKVGINGLTQQLSRE  175 (253)
T ss_dssp             ---------------CCHHHHHHHHHHHHHH
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHH
Confidence                     2236999999999999988764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.8e-32  Score=221.85  Aligned_cols=169  Identities=16%  Similarity=0.159  Sum_probs=142.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC---cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ...++++|++|||||++|||+++|++|+++|++|++++|..   +.+++..+++...  +.++.++++|++|++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHH
Confidence            45678999999999999999999999999999999998753   3456666666554  568999999999999999999


Q ss_pred             HHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          102 SEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +++.+.++++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|+       +.|+||++||..+..+.
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-------~~g~iv~isS~~~~~~~  155 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN-------PNGHIITIATSLLAAYT  155 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE-------EEEEEEEECCCHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-------CCCEEEEEechhhccCC
Confidence            99999999999999999986  3455789999999999999999999999999994       36899999999988876


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++..          .|+.||+++++|++.++..
T Consensus       156 ~~~~----------~Y~asKaa~~~l~~~la~e  178 (262)
T 3ksu_A          156 GFYS----------TYAGNKAPVEHYTRAASKE  178 (262)
T ss_dssp             CCCC----------C-----CHHHHHHHHHHHH
T ss_pred             CCCc----------hhHHHHHHHHHHHHHHHHH
Confidence            5543          7999999999999988764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=9.6e-32  Score=219.69  Aligned_cols=164  Identities=17%  Similarity=0.185  Sum_probs=142.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+++++..++    . +.++.++++|++|+++++++++++.+.
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA----H-GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----T-BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH----c-CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999997766554443    2 467899999999999999999999999


Q ss_pred             cCCccEEEECCccCCC---C----CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          108 HHQLNILINNAGIMGT---P----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~---~----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++++|+||||||+..+   .    .+.+.++|++++++|+.+++.++++++|+|.++      +|+||++||..+..+.+
T Consensus        77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  150 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS------RGSVVFTISNAGFYPNG  150 (281)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTSSSS
T ss_pred             cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc------CCeEEEEecchhccCCC
Confidence            9999999999998532   1    234567899999999999999999999999875      58999999999988755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +..          .|+.||+++++|++.++..
T Consensus       151 ~~~----------~Y~asKaa~~~l~~~la~e  172 (281)
T 3zv4_A          151 GGP----------LYTATKHAVVGLVRQMAFE  172 (281)
T ss_dssp             SCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             CCc----------hhHHHHHHHHHHHHHHHHH
Confidence            443          7999999999999998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.3e-31  Score=216.13  Aligned_cols=170  Identities=26%  Similarity=0.311  Sum_probs=148.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988777766654     45789999999999999999999999


Q ss_pred             hcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|+||||||+..   +..+.+.++|++.+++|+.+++.+++.++|.|.++.. .+..|+||++||..+..+.++..
T Consensus        80 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~  158 (261)
T 3n74_A           80 KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA-KGQECVILNVASTGAGRPRPNLA  158 (261)
T ss_dssp             HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCTTTTSCCTTCH
T ss_pred             hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCCCeEEEEeCchhhcCCCCCcc
Confidence            9999999999999863   3445789999999999999999999999999987622 22367899999999887755543


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                .|+.||+++++|++.++..
T Consensus       159 ----------~Y~asKaa~~~~~~~la~e  177 (261)
T 3n74_A          159 ----------WYNATKGWVVSVTKALAIE  177 (261)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH
Confidence                      7999999999999998764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-31  Score=220.72  Aligned_cols=168  Identities=22%  Similarity=0.231  Sum_probs=147.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCC---eEEEEEccCCCHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .++++|++|||||++|||.++++.|+++|++|++++|+.+++++..+++...  +.   ++.++.+|++|++++++++++
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCHHHHHHHHHH
Confidence            4588999999999999999999999999999999999988888877777654  33   789999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC--C--CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          104 YNIQHHQLNILINNAGIMG--T--PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +.+.++++|+||||||+..  +  ..+.+.++|++++++|+.+++.+++.++|.|.++      +|+||++||..+..+.
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~IV~isS~~~~~~~  173 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT------KGEIVNVSSIVAGPQA  173 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGSSSC
T ss_pred             HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc------CCEEEEEcCchhccCC
Confidence            9999999999999999863  3  4577899999999999999999999999999875      3899999999887754


Q ss_pred             -cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 -HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 -~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                       ++          ...|+.||+++++|++.++..
T Consensus       174 ~~~----------~~~Y~asKaa~~~l~~~la~e  197 (297)
T 1xhl_A          174 HSG----------YPYYACAKAALDQYTRCTAID  197 (297)
T ss_dssp             CTT----------SHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC----------cchHHHHHHHHHHHHHHHHHH
Confidence             32          348999999999999988753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.5e-31  Score=216.17  Aligned_cols=165  Identities=23%  Similarity=0.285  Sum_probs=145.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++.     .++.++++|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999877665554442     24788999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++    
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~----  149 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLAGTVA----  149 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEeehhhcCCCCC----
Confidence            999999999999863  45678899999999999999999999999999876     5789999999988876543    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||++++++++.++..
T Consensus       150 ------~~~Y~~sK~a~~~~~~~la~e  170 (260)
T 1nff_A          150 ------CHGYTATKFAVRGLTKSTALE  170 (260)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999988754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1e-31  Score=216.48  Aligned_cols=165  Identities=24%  Similarity=0.258  Sum_probs=144.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999977665554433     346889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++    
T Consensus        77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~----  147 (254)
T 1hdc_A           77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLMGLAL----  147 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhccCCCC----
Confidence            999999999999863  44577899999999999999999999999999886     5799999999988876543    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||+++++|++.++..
T Consensus       148 ------~~~Y~asK~a~~~~~~~la~e  168 (254)
T 1hdc_A          148 ------TSSYGASKWGVRGLSKLAAVE  168 (254)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999988754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-31  Score=215.05  Aligned_cols=165  Identities=23%  Similarity=0.255  Sum_probs=146.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999988877777777654  457889999999999999999999999999


Q ss_pred             ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCccCCC
Q 027991          111 LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      +|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     + .|+||++||..+..+.++.     
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~-----  149 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE-----GHGGKIINACSQAGHVGNPEL-----  149 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSCEEEEEECCGGGTSCCTTB-----
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCCEEEEECchhhcCCCCCc-----
Confidence            999999999863  45577899999999999999999999999999876     4 6899999999888765443     


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           ..|+.||+++++|++.++..
T Consensus       150 -----~~Y~asK~a~~~~~~~la~e  169 (256)
T 1geg_A          150 -----AVYSSSKFAVRGLTQTAARD  169 (256)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHH
T ss_pred             -----hhHHHHHHHHHHHHHHHHHH
Confidence                 48999999999999988753

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.1e-31  Score=220.39  Aligned_cols=175  Identities=18%  Similarity=0.169  Sum_probs=147.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE-cCCcchHHHHHHHHhhcCCCeEEEEEccCCCHH----------
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA----------   95 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~----------   95 (216)
                      .++++|++|||||++|||+++++.|+++|++|++++ |+.+++++..+++.... +.++.++++|++|++          
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----C
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCcccccccccccc
Confidence            457899999999999999999999999999999999 99888888877776343 467899999999999          


Q ss_pred             -------HHHHHHHHHHhhcCCccEEEECCccCC--CCCCCC--------------hHHHHHHHHHHHhHHHHHHHHHHH
Q 027991           96 -------SVRNFASEYNIQHHQLNILINNAGIMG--TPFMLS--------------KDNIELQFATNHLGHFLLTNLLLD  152 (216)
Q Consensus        96 -------~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~~~  152 (216)
                             +++++++++.+.++++|+||||||+..  +..+.+              .++|++++++|+.+++.+++.++|
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                   999999999999999999999999863  445667              899999999999999999999999


Q ss_pred             HHHHhhc-cCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          153 TMKKTAR-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       153 ~~~~~~~-~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .|.++.. ..+..|+||++||..+..+.++.          ..|+.||+++++|++.++..
T Consensus       164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~----------~~Y~asKaa~~~l~~~la~e  214 (291)
T 1e7w_A          164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGY----------TIYTMAKGALEGLTRSAALE  214 (291)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTTSCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCCCcEEEEEechhhcCCCCCC----------chhHHHHHHHHHHHHHHHHH
Confidence            9987510 01115899999999988765443          48999999999999998754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.1e-31  Score=218.19  Aligned_cols=170  Identities=21%  Similarity=0.279  Sum_probs=148.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .+++++|++|||||++|||.+++++|+++|++|++++|+.+. .+...+++...  +.++.++++|++|+++++++++++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHH
Confidence            456889999999999999999999999999999999996544 45555555443  568999999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.
T Consensus       102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  176 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-----RFGSVVNVASIIGERGNMGQ  176 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCTTC
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEechhhcCCCCCc
Confidence            999999999999999874  34577999999999999999999999999999987     67999999999998875544


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       177 ----------~~Y~asK~a~~~~~~~la~e  196 (271)
T 4iin_A          177 ----------TNYSASKGGMIAMSKSFAYE  196 (271)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hHhHHHHHHHHHHHHHHHHH
Confidence                      38999999999999988754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=7.5e-32  Score=218.86  Aligned_cols=171  Identities=20%  Similarity=0.218  Sum_probs=145.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +..++.+|++|||||++|||.+++++|+++|++|+++++ +.+..++..+++...  +.++.++.+|++|++++++++++
T Consensus        19 p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~   96 (269)
T 3gk3_A           19 PGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEK   96 (269)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             chhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHH
Confidence            334578999999999999999999999999999999984 444455555555433  56799999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+.++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~  171 (269)
T 3gk3_A           97 VLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-----RFGRIVNIGSVNGSRGAFG  171 (269)
T ss_dssp             HHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCTT
T ss_pred             HHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEeCChhhccCCCC
Confidence            9999999999999999873  45678999999999999999999999999999886     6799999999998887554


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       172 ~----------~~Y~asKaa~~~~~~~la~e  192 (269)
T 3gk3_A          172 Q----------ANYASAKAGIHGFTKTLALE  192 (269)
T ss_dssp             B----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             c----------chHHHHHHHHHHHHHHHHHH
Confidence            4          38999999999999988754

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.4e-31  Score=212.82  Aligned_cols=163  Identities=24%  Similarity=0.341  Sum_probs=145.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... +.++.++++|++|+++++++++++.+.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999999998888888886544 56899999999999999999999999999


Q ss_pred             CccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|.+      .+|++|+++|..+..+.+..     
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------~~~~ii~~sS~~~~~~~~~~-----  148 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR------TGGLALVTTSDVSARLIPYG-----  148 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH------HTCEEEEECCGGGSSCCTTC-----
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCcEEEEecchhcccCCCc-----
Confidence            999999999986  35567899999999999999999999999999965      37899999998888765443     


Q ss_pred             CCCCCccchHHHHHHHHHHHHH
Q 027991          188 INDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                           ..|+.||+++++|++.+
T Consensus       149 -----~~Y~~sKaa~~~~~~~l  165 (235)
T 3l77_A          149 -----GGYVSTKWAARALVRTF  165 (235)
T ss_dssp             -----HHHHHHHHHHHHHHHHH
T ss_pred             -----chHHHHHHHHHHHHHHH
Confidence                 38999999999999988

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=9.1e-32  Score=221.21  Aligned_cols=168  Identities=23%  Similarity=0.165  Sum_probs=145.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC--cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.  +..+...+.+...  +.++.++++|++|++++++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999873  3344454444433  56789999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          104 YNIQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +.+.++++|+||||||+..   +..+.+.++|++.+++|+.++++++++++|.|.+       +|+||++||..+..+.+
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~~  194 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-------GASIITTSSIQAYQPSP  194 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCGGGTSCCT
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECChhhccCCC
Confidence            9999999999999999853   4557899999999999999999999999999863       58999999999988755


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       195 ~~----------~~Y~asKaa~~~l~~~la~e  216 (294)
T 3r3s_A          195 HL----------LDYAATKAAILNYSRGLAKQ  216 (294)
T ss_dssp             TC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             Cc----------hHHHHHHHHHHHHHHHHHHH
Confidence            44          38999999999999998764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-31  Score=220.05  Aligned_cols=180  Identities=26%  Similarity=0.322  Sum_probs=150.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH-HHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~  105 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++.... +.++.++.+|++|+ ++++++++++.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999998888888887664 45799999999998 99999999999


Q ss_pred             hhcCCccEEEECCccCC--------------------------------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHH
Q 027991          106 IQHHQLNILINNAGIMG--------------------------------TPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~--------------------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  153 (216)
                      +.++++|+||||||+..                                +..+.+.+++++++++|+.|++.+++.++|.
T Consensus        87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence            99999999999999863                                2235688999999999999999999999999


Q ss_pred             HHHhhccCCCCcEEEEEcCCcccccccCC---------------------------------ccCCCCCCCCccchHHHH
Q 027991          154 MKKTARKSGGEGRIINVSSEGHRLAYHEG---------------------------------IRFDKINDPSGSFQSSAL  200 (216)
Q Consensus       154 ~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------------------------------~~~~~~~~~~~~Y~~ska  200 (216)
                      |+++     +.|+||++||..+..+....                                 ............|+.||+
T Consensus       167 l~~~-----~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          167 LQLS-----DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HTTS-----SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             hccC-----CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            9875     57899999999988764221                                 001111234568999999


Q ss_pred             HHHHHHHHHHhh
Q 027991          201 LLLLLLHLLFFL  212 (216)
Q Consensus       201 ~~~~l~~~~~~~  212 (216)
                      ++++|++.++..
T Consensus       242 a~~~~~~~la~e  253 (311)
T 3o26_A          242 CLNAYTRVLANK  253 (311)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh
Confidence            999999998764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-31  Score=217.35  Aligned_cols=167  Identities=20%  Similarity=0.185  Sum_probs=147.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCC---eEEEEEccCCCHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA---KVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.   ++.++++|++|+++++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS--GVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988888777777654  33   7899999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--C----CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          105 NIQHHQLNILINNAGIMG--T----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      .+.++++|+||||||+..  +    ..+.+.++|++.+++|+.+++.+++.++|.|.++      +|+||++||..+..+
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~  154 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQ  154 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSS
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC------CCcEEEecCccccCC
Confidence            999999999999999863  2    4467899999999999999999999999999875      389999999988775


Q ss_pred             c-cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 Y-HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~-~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      . ++          ...|+.||+++++|++.++..
T Consensus       155 ~~~~----------~~~Y~asK~a~~~~~~~la~e  179 (280)
T 1xkq_A          155 AQPD----------FLYYAIAKAALDQYTRSTAID  179 (280)
T ss_dssp             CCCS----------SHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCc----------ccHHHHHHHHHHHHHHHHHHH
Confidence            4 32          348999999999999998753

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-31  Score=214.25  Aligned_cols=162  Identities=25%  Similarity=0.296  Sum_probs=142.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.++ ++..+++     . + .++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----~-~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----G-G-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----T-C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----h-C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999876 5544443     1 3 78899999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|.|+++     +.|+||++||..+..+.++.   
T Consensus        75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~~---  146 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----GGGAIVNVASVQGLFAEQEN---  146 (256)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCGGGTSBCTTB---
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccccccCCCCCC---
Confidence            999999999999863  45678899999999999999999999999999875     57899999999888765443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       147 -------~~Y~~sK~a~~~~~~~la~e  166 (256)
T 2d1y_A          147 -------AAYNASKGGLVNLTRSLALD  166 (256)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -------hhHHHHHHHHHHHHHHHHHH
Confidence                   48999999999999988753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.7e-31  Score=218.71  Aligned_cols=180  Identities=21%  Similarity=0.171  Sum_probs=144.0

Q ss_pred             ccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCC----HHH
Q 027991           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSS----LAS   96 (216)
Q Consensus        22 ~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~----~~~   96 (216)
                      ...+..++++|++|||||++|||.+++++|+++|++|++++|+. +++++..+++.... +.++.++++|++|    +++
T Consensus        14 ~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~   92 (288)
T 2x9g_A           14 LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPAS   92 (288)
T ss_dssp             --------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHH
T ss_pred             cCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHH
Confidence            33445568899999999999999999999999999999999998 77777777776343 4678999999999    999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCC--CC-----CC-----CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-cCCC
Q 027991           97 VRNFASEYNIQHHQLNILINNAGIMG--TP-----FM-----LSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGG  163 (216)
Q Consensus        97 ~~~~~~~~~~~~~~id~li~~Ag~~~--~~-----~~-----~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~~  163 (216)
                      ++++++++.+.++++|+||||||+..  +.     .+     .+.++|++.+++|+.+++.+++.++|.|.++.. ....
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  172 (288)
T 2x9g_A           93 CEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS  172 (288)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence            99999999999999999999999863  33     45     678899999999999999999999999987510 0011


Q ss_pred             CcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          164 EGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       164 ~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .|+||++||..+..+.++.          ..|+.||+++++|++.++..
T Consensus       173 ~g~iv~isS~~~~~~~~~~----------~~Y~asKaa~~~l~~~la~e  211 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQPCMAF----------SLYNMGKHALVGLTQSAALE  211 (288)
T ss_dssp             CEEEEEECCTTTTSCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecccccCCCCCC----------chHHHHHHHHHHHHHHHHHH
Confidence            6899999999888764443          38999999999999988754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.8e-31  Score=213.86  Aligned_cols=165  Identities=27%  Similarity=0.274  Sum_probs=144.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|++|||||++|||.+++++|+++|++|++++|+.+  ++..+++...  +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999876  4455555443  4578899999999999999999999999


Q ss_pred             CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++     
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~-----  147 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-----NWGRIINIASVHGLVGSTG-----  147 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSCCTT-----
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcCchhccCCCC-----
Confidence            99999999999863  44577899999999999999999999999999875     5689999999988876543     


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           ...|+.||+++++|++.++..
T Consensus       148 -----~~~Y~~sK~a~~~~~~~la~e  168 (255)
T 2q2v_A          148 -----KAAYVAAKHGVVGLTKVVGLE  168 (255)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----chhHHHHHHHHHHHHHHHHHH
Confidence                 348999999999999998754

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.8e-31  Score=216.80  Aligned_cols=161  Identities=24%  Similarity=0.286  Sum_probs=141.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ...++++|++|||||++|||.+++++|+++|++|++++|+.+...            .....+++|++|+++++++++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV------------NVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT------------TSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc------------CceeEEEecCCCHHHHHHHHHHH
Confidence            455688999999999999999999999999999999999876531            24567899999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|+||||||+.  .+..+.+.++|++++++|+.+++.++++++|.|.++     +.|+||++||..+..+.++.
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  150 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-----GHGSIINIASVQSYAATKNA  150 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSBCTTC
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhccCCCCC
Confidence            99999999999999986  345578999999999999999999999999999987     67999999999998875544


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       151 ----------~~Y~asKaa~~~l~~~la~e  170 (269)
T 3vtz_A          151 ----------AAYVTSKHALLGLTRSVAID  170 (269)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHH
Confidence                      38999999999999998754

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.9e-31  Score=216.44  Aligned_cols=164  Identities=25%  Similarity=0.311  Sum_probs=146.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +.+|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+.+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            56899999999999999999999999999999999988777655432     4578999999999999999999999999


Q ss_pred             CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++.    
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~----  148 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----GSGSVVNISSFGGQLSFAGF----  148 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCTTC----
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccCCCCCc----
Confidence            9999999999986  456688999999999999999999999999999987     67899999999888765443    


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ..|+.||++++++++.++..
T Consensus       149 ------~~Y~~sK~a~~~~~~~la~e  168 (281)
T 3m1a_A          149 ------SAYSATKAALEQLSEGLADE  168 (281)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hHHHHHHHHHHHHHHHHHHH
Confidence                  48999999999999988754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.98  E-value=2.7e-31  Score=213.93  Aligned_cols=160  Identities=23%  Similarity=0.266  Sum_probs=142.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +|++|||||++|||.+++++|+++|  +.|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999999986  68999999987776665554     4578999999999999999999999999


Q ss_pred             CCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          109 HQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       109 ~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +++|+||||||+.   .+..+.+.++|++.+++|+.+++.+++.++|+|+++      +|+||++||..+..+.++.   
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~------~g~iv~isS~~~~~~~~~~---  147 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT------NGNVVFVSSDACNMYFSSW---  147 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCSCCCCSSCCS---
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCeEEEEcCchhccCCCCc---
Confidence            9999999999985   355678999999999999999999999999999885      4899999999998875544   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ..|+.||+++++|++.++.
T Consensus       148 -------~~Y~asK~a~~~~~~~la~  166 (254)
T 3kzv_A          148 -------GAYGSSKAALNHFAMTLAN  166 (254)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHH
T ss_pred             -------chHHHHHHHHHHHHHHHHh
Confidence                   3899999999999998875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.98  E-value=1.7e-31  Score=214.56  Aligned_cols=161  Identities=22%  Similarity=0.330  Sum_probs=142.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+++||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+.++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999987766665554     3468899999999999999999999999999


Q ss_pred             cEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          112 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       112 d~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      |+||||||+.   .+..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++       
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~-------  143 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSWPYAG-------  143 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCTT-------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEccchhccCCCC-------
Confidence            9999999985   245578899999999999999999999999999876     5799999999988876444       


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ...|+.||+++++|++.++..
T Consensus       144 ---~~~Y~asKaa~~~~~~~la~e  164 (248)
T 3asu_A          144 ---GNVYGATKAFVRQFSLNLRTD  164 (248)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CchHHHHHHHHHHHHHHHHHH
Confidence               348999999999999998753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.98  E-value=9.8e-32  Score=218.09  Aligned_cols=163  Identities=21%  Similarity=0.195  Sum_probs=139.2

Q ss_pred             ccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        22 ~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      .+.++.++++|++|||||++|||.++|++|+++|++|++++|+.+..+.             ...+++|++|.+++++++
T Consensus        19 ~~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-------------~~~~~~Dv~~~~~~~~~~   85 (266)
T 3uxy_A           19 YFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-------------DLHLPGDLREAAYADGLP   85 (266)
T ss_dssp             -------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-------------SEECCCCTTSHHHHHHHH
T ss_pred             chhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-------------hhccCcCCCCHHHHHHHH
Confidence            4455677899999999999999999999999999999999998765321             234589999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          102 SEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +++.+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..+.
T Consensus        86 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~  160 (266)
T 3uxy_A           86 GAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-----GGGAIVNVASCWGLRPG  160 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTBCC
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCCCC
Confidence            999999999999999999864  45578999999999999999999999999999987     68999999999998875


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++.          ..|+.||+++++|++.++..
T Consensus       161 ~~~----------~~Y~asKaa~~~l~~~la~e  183 (266)
T 3uxy_A          161 PGH----------ALYCLTKAALASLTQCMGMD  183 (266)
T ss_dssp             TTB----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC----------hHHHHHHHHHHHHHHHHHHH
Confidence            543          38999999999999998754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.98  E-value=7e-32  Score=220.54  Aligned_cols=178  Identities=17%  Similarity=0.111  Sum_probs=147.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC------------CcchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD------------IAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      +.++++|++|||||++|||.+++++|+++|++|++++|+            .+.+++..+++...  +.++.++++|++|
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   82 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRD   82 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCC
Confidence            456899999999999999999999999999999999987            44455555555544  6789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      +++++++++++.+.++++|+||||||+.....+.+.++|++.+++|+.+++++++.++|+|.       +.|+||++||.
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------~~g~iv~isS~  155 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT-------SGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC-------TTCEEEEECCH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh-------cCcEEEEeccc
Confidence            99999999999999999999999999975445578999999999999999999999999994       47899999999


Q ss_pred             cccccccCCccCC-CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          174 GHRLAYHEGIRFD-KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       174 ~~~~~~~~~~~~~-~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+..+........ ........|+.||+++++|++.++..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e  195 (287)
T 3pxx_A          156 AGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQ  195 (287)
T ss_dssp             HHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHH
Confidence            8887653222111 11123348999999999999998764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.98  E-value=3.2e-31  Score=220.83  Aligned_cols=169  Identities=22%  Similarity=0.232  Sum_probs=142.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-----cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-----AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      +|++|++|||||++|||.+++++|+++|++|++++|+.     ++++...+.+...  +.++.++++|++|+++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~   79 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAID   79 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHH
Confidence            36789999999999999999999999999999988863     3334444444433  5679999999999999999999


Q ss_pred             HHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          103 EYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++.+.+|++|+||||||+.  .+..+.+.++|++++++|+.|++.++++++|+|+++     +.|+||++||..+..+.+
T Consensus        80 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-----~~g~iV~isS~~~~~~~~  154 (324)
T 3u9l_A           80 QIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-----KHGLLIWISSSSSAGGTP  154 (324)
T ss_dssp             HHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEecchhccCCC
Confidence            9999999999999999986  456678999999999999999999999999999987     679999999988875422


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +         ....|+.||++++++++.++..
T Consensus       155 ~---------~~~~Y~asKaa~~~~~~~la~e  177 (324)
T 3u9l_A          155 P---------YLAPYFAAKAAMDAIAVQYARE  177 (324)
T ss_dssp             S---------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---------cchhHHHHHHHHHHHHHHHHHH
Confidence            1         1347999999999999998754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.98  E-value=2.7e-31  Score=213.76  Aligned_cols=163  Identities=25%  Similarity=0.291  Sum_probs=144.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987766655554     456889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++     + |+||++||..+..+.++    
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~-g~iv~isS~~~~~~~~~----  147 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-----G-GSIINMASVSSWLPIEQ----  147 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----C-EEEEEECCGGGTSCCTT----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-----C-CEEEEEcchhhcCCCCC----
Confidence            999999999999863  45678999999999999999999999999999875     4 99999999988876443    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            ...|+.||+++++|++.++.
T Consensus       148 ------~~~Y~~sK~a~~~~~~~la~  167 (253)
T 1hxh_A          148 ------YAGYSASKAAVSALTRAAAL  167 (253)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CccHHHHHHHHHHHHHHHHH
Confidence                  34899999999999998864

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.98  E-value=4e-31  Score=217.27  Aligned_cols=167  Identities=14%  Similarity=0.101  Sum_probs=144.0

Q ss_pred             CCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        26 ~~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +..+++|++|||||+  +|||.++++.|+++|++|++++|+.+. .+..+++..+.  .++.++++|++|++++++++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~  102 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEEL--GAFVAGHCDVADAASIDAVFET  102 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHH
Confidence            446899999999999  559999999999999999999999543 34444554443  3578999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          104 YNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      +.+.++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|++       .|+||++||..+..
T Consensus       103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~  175 (293)
T 3grk_A          103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-------GGSILTLTYYGAEK  175 (293)
T ss_dssp             HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-------CEEEEEEECGGGTS
T ss_pred             HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CCEEEEEeehhhcc
Confidence            9999999999999999863      4557899999999999999999999999999973       68999999999988


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.++..          .|+.||+++++|++.++..
T Consensus       176 ~~~~~~----------~Y~asKaa~~~l~~~la~e  200 (293)
T 3grk_A          176 VMPNYN----------VMGVAKAALEASVKYLAVD  200 (293)
T ss_dssp             BCTTTT----------HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchH----------HHHHHHHHHHHHHHHHHHH
Confidence            755543          8999999999999998754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.98  E-value=6e-31  Score=215.01  Aligned_cols=169  Identities=19%  Similarity=0.266  Sum_probs=145.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ...+++|++|||||++|||.+++++|+++|++|++++|+.+. .+...+++...  +.++.++.+|++|+++++++++++
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHH
Confidence            456889999999999999999999999999999999998754 45555555543  567889999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|+||||||+..  +..+.+.++|++++++|+.+++.++++++|.|.       +.|+||++||..+..+.++ 
T Consensus       102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------~~g~iv~isS~~~~~~~~~-  173 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE-------IGGRLILMGSITGQAKAVP-  173 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC-------TTCEEEEECCGGGTCSSCS-
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh-------cCCeEEEEechhhccCCCC-
Confidence            999999999999999863  455778999999999999999999999999993       4689999999988765332 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ....|+.||+++++|++.++..
T Consensus       174 --------~~~~Y~asK~a~~~~~~~la~e  195 (283)
T 1g0o_A          174 --------KHAVYSGSKGAIETFARCMAID  195 (283)
T ss_dssp             --------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHH
Confidence                    2448999999999999988753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.98  E-value=2e-31  Score=216.91  Aligned_cols=167  Identities=25%  Similarity=0.266  Sum_probs=144.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+|+ |++|||||++|||.+++++|+++|++|++++|+.+++++..+++...   .++.++++|++|+++++++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3455 99999999999999999999999999999999988777766665332   4688999999999999999999999


Q ss_pred             hcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCc-EEEEEcCCcccccccCC
Q 027991          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG-RIINVSSEGHRLAYHEG  182 (216)
Q Consensus       107 ~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~~~~  182 (216)
                      .++++|+||||||+.   .+..+.+.++|++++++|+.+++.+++.++|.|.++     +.| +||++||..+..+.++.
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~~IV~isS~~~~~~~~~~  168 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-----GAGASIVNLGSVAGKWPYPGS  168 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----CTTCEEEEECCGGGTSCCTTC
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCcEEEEeCCchhccCCCCC
Confidence            999999999999985   345578899999999999999999999999999876     567 99999999888764443


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       169 ----------~~Y~asKaa~~~l~~~la~e  188 (272)
T 2nwq_A          169 ----------HVYGGTKAFVEQFSLNLRCD  188 (272)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHTT
T ss_pred             ----------chHHHHHHHHHHHHHHHHHH
Confidence                      48999999999999988743

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.98  E-value=2.4e-31  Score=214.62  Aligned_cols=172  Identities=23%  Similarity=0.256  Sum_probs=149.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH---cCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++++|++|||||++|||.+++++|++   +|++|++++|+.+++++..+++...+++.++.++++|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            47789999999999999999999999   899999999999888888888877665678999999999999999999999


Q ss_pred             Hh--hcCCcc--EEEECCccCC----CCCC-CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          105 NI--QHHQLN--ILINNAGIMG----TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       105 ~~--~~~~id--~li~~Ag~~~----~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      .+  .++++|  +||||||+..    +..+ .+.++|++++++|+.+++.+++.++|.|.+++   ++.|+||++||..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~g~iv~isS~~~  159 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLCA  159 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGGG
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCceEEEEcCchh
Confidence            88  678899  9999999863    2345 68899999999999999999999999997520   13589999999998


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+.++.          ..|+.||+++++|++.++..
T Consensus       160 ~~~~~~~----------~~Y~asKaa~~~~~~~la~e  186 (259)
T 1oaa_A          160 LQPYKGW----------GLYCAGKAARDMLYQVLAAE  186 (259)
T ss_dssp             TSCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCc----------cHHHHHHHHHHHHHHHHHhh
Confidence            8765443          48999999999999998753

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.98  E-value=2.6e-31  Score=214.85  Aligned_cols=167  Identities=20%  Similarity=0.240  Sum_probs=144.5

Q ss_pred             ccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        22 ~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      .+.++..+++|++|||||++|||.+++++|+++|++|++++|+.+..+           ..++.++++|++|++++++++
T Consensus        19 ~~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~   87 (260)
T 3un1_A           19 YFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIV   87 (260)
T ss_dssp             -CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHH
T ss_pred             hhhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHH
Confidence            344456688999999999999999999999999999999999876533           236889999999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          102 SEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +++.+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|.|.++     +.|+||++||..+..+.
T Consensus        88 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~  162 (260)
T 3un1_A           88 REGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-----GSGHIVSITTSLVDQPM  162 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCTTTTSCB
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhccCC
Confidence            999999999999999999863  45578999999999999999999999999999986     67999999998776443


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.        .+...|+.||+++++|++.++..
T Consensus       163 ~~--------~~~~~Y~~sKaa~~~l~~~la~e  187 (260)
T 3un1_A          163 VG--------MPSALASLTKGGLNAVTRSLAME  187 (260)
T ss_dssp             TT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC--------CccHHHHHHHHHHHHHHHHHHHH
Confidence            22        23458999999999999998764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.98  E-value=4.7e-31  Score=213.34  Aligned_cols=168  Identities=24%  Similarity=0.286  Sum_probs=144.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +..++++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++     ..++.++++|++|+++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A            6 GIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hcCCeEEEEeCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999976655444332     225788999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~  181 (216)
                      .+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|.|.++     + .|+||++||..+..+.++
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~  155 (263)
T 3ak4_A           81 IDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS-----NTKGVIVNTASLAAKVGAPL  155 (263)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCCEEEEECCGGGTSCCTT
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCeEEEEecccccccCCCC
Confidence            999999999999999863  45577899999999999999999999999999875     4 689999999988776443


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ...|+.||+++++|++.++..
T Consensus       156 ----------~~~Y~~sK~a~~~~~~~la~e  176 (263)
T 3ak4_A          156 ----------LAHYSASKFAVFGWTQALARE  176 (263)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHH
Confidence                      348999999999999988653

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.98  E-value=3.9e-31  Score=215.35  Aligned_cols=169  Identities=21%  Similarity=0.225  Sum_probs=141.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhh-cCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++... ..+.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999988777776666321 1245788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCC----ChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc-cccc
Q 027991          107 QHHQLNILINNAGIMG--TPFML----SKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH-RLAY  179 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~  179 (216)
                      .++++|+||||||+..  +..+.    +.++|++.+++|+.+++.+++.++|.|+++      +|+||++||..+ ..+.
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~  156 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLHAT  156 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSSCC
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEecccccccCC
Confidence            9999999999999863  34456    899999999999999999999999999875      489999999988 6654


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++          ...|+.||++++++++.++..
T Consensus       157 ~~----------~~~Y~~sK~a~~~~~~~la~e  179 (278)
T 1spx_A          157 PD----------FPYYSIAKAAIDQYTRNTAID  179 (278)
T ss_dssp             TT----------SHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC----------ccHHHHHHHHHHHHHHHHHHH
Confidence            43          348999999999999988643

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.98  E-value=4.3e-31  Score=211.70  Aligned_cols=162  Identities=21%  Similarity=0.267  Sum_probs=140.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+++++..++    . +  +.++++|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~-~--~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA----V-G--AHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----T-T--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----c-C--CEEEEecCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999997665544332    2 2  678899999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||.. ..+.++    
T Consensus        75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~-~~~~~~----  144 (245)
T 1uls_A           75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----NPGSIVLTASRV-YLGNLG----  144 (245)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CCEEEEEECCGG-GGCCTT----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEccch-hcCCCC----
Confidence            999999999999863  44577899999999999999999999999999875     578999999988 665443    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||+++++|++.++..
T Consensus       145 ------~~~Y~asK~a~~~~~~~la~e  165 (245)
T 1uls_A          145 ------QANYAASMAGVVGLTRTLALE  165 (245)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999998754

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.97  E-value=5.9e-31  Score=213.85  Aligned_cols=173  Identities=25%  Similarity=0.250  Sum_probs=146.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+.++|++|||||++|||.++|++|+++|++|+++ .|+.+..+...+++...  +.++.++.+|++|+++++++++++.
T Consensus        22 ~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   99 (272)
T 4e3z_A           22 SMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVD   99 (272)
T ss_dssp             --CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34568999999999999999999999999999887 66666677777776654  5689999999999999999999999


Q ss_pred             hhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|+||||||+..   +..+.+.++|++++++|+.+++.+++.++|.|.++.  .+..|+||++||.++..+.+. 
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~-  176 (272)
T 4e3z_A          100 RQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLY--SGQGGAIVNVSSMAAILGSAT-  176 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCTHHHHCCTT-
T ss_pred             HhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhc--cCCCCEEEEEcchHhccCCCC-
Confidence            99999999999999863   445779999999999999999999999999998641  224789999999998876442 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ....|+.||+++++|++.++..
T Consensus       177 --------~~~~Y~asKaa~~~~~~~la~e  198 (272)
T 4e3z_A          177 --------QYVDYAASKAAIDTFTIGLARE  198 (272)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHH
Confidence                    2237999999999999988764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.97  E-value=4.7e-31  Score=213.87  Aligned_cols=182  Identities=21%  Similarity=0.231  Sum_probs=146.1

Q ss_pred             CCCCCccccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE-cCCcchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           15 SASSTAEEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        15 ~~~~~~~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      +.......+..+..+.+|++|||||++|||.+++++|+++|++|++.. |+.+..++..+++...  +.++.++.+|++|
T Consensus        10 ~~~~~~~n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~   87 (267)
T 4iiu_A           10 GVDLGTENLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVAN   87 (267)
T ss_dssp             ---------------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             ccccCChhhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCC
Confidence            344444555556678899999999999999999999999999997755 6666677777777665  5678999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEc
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  171 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~is  171 (216)
                      +++++++++++.+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.+++.|.++    .+.|+||++|
T Consensus        88 ~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~g~iv~is  163 (267)
T 4iiu_A           88 REQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA----RQGGRIITLS  163 (267)
T ss_dssp             HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEc
Confidence            99999999999999999999999999874  34577999999999999999999999999998743    1578999999


Q ss_pred             CCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          172 SEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |..+..+.++.          ..|+.||+++++|++.++..
T Consensus       164 S~~~~~~~~~~----------~~Y~asKaa~~~~~~~la~e  194 (267)
T 4iiu_A          164 SVSGVMGNRGQ----------VNYSAAKAGIIGATKALAIE  194 (267)
T ss_dssp             CHHHHHCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhccCCCCC----------chhHHHHHHHHHHHHHHHHH
Confidence            99998876544          38999999999999988754

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.97  E-value=5.6e-31  Score=214.24  Aligned_cols=173  Identities=15%  Similarity=0.103  Sum_probs=141.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCH----HHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSL----ASVRNFAS  102 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~----~~~~~~~~  102 (216)
                      .|++|++|||||++|||.+++++|+++|++|++++| +.+++++..+++.... +.++.++++|++|+    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHH
Confidence            367899999999999999999999999999999999 8777777777776543 35788999999999    99999999


Q ss_pred             HHHhhcCCccEEEECCccCC--CCCCCCh-----------HHHHHHHHHHHhHHHHHHHHHHHHHHHhh-ccCCCCcEEE
Q 027991          103 EYNIQHHQLNILINNAGIMG--TPFMLSK-----------DNIELQFATNHLGHFLLTNLLLDTMKKTA-RKSGGEGRII  168 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~--~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~~~~g~iv  168 (216)
                      ++.+.++++|+||||||+..  +..+.+.           ++|++++++|+.+++.+++.++|.|. +. .....+|+||
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv  165 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence            99999999999999999863  4456666           89999999999999999999999997 31 0011228999


Q ss_pred             EEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          169 NVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       169 ~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++||..+..+.++.          ..|+.||+++++|++.++..
T Consensus       166 ~isS~~~~~~~~~~----------~~Y~asK~a~~~l~~~la~e  199 (276)
T 1mxh_A          166 NLCDAMTDLPLPGF----------CVYTMAKHALGGLTRAAALE  199 (276)
T ss_dssp             EECCGGGGSCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             EECchhhcCCCCCC----------eehHHHHHHHHHHHHHHHHH
Confidence            99999988765443          48999999999999988754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.97  E-value=7.5e-31  Score=218.90  Aligned_cols=174  Identities=18%  Similarity=0.171  Sum_probs=146.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE-cCCcchHHHHHHHHhhcCCCeEEEEEccCCCHH-----------
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA-----------   95 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-----------   95 (216)
                      .+++|++|||||++|||.++++.|+++|++|++++ |+.+++++..+++.... +.++.++++|++|++           
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhcccccccccc
Confidence            37899999999999999999999999999999999 99888888777776343 467899999999999           


Q ss_pred             ------HHHHHHHHHHhhcCCccEEEECCccCC--CCCCCC--------------hHHHHHHHHHHHhHHHHHHHHHHHH
Q 027991           96 ------SVRNFASEYNIQHHQLNILINNAGIMG--TPFMLS--------------KDNIELQFATNHLGHFLLTNLLLDT  153 (216)
Q Consensus        96 ------~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~~~~  153 (216)
                            +++++++++.+.++++|+||||||+..  +..+.+              .++|++++++|+.+++.+++.++|.
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  999999999999999999999999863  445666              8999999999999999999999999


Q ss_pred             HHHhhc-cCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          154 MKKTAR-KSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       154 ~~~~~~-~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |.++.. ..+..|+||++||..+..+.++.          ..|+.||+++++|++.++..
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~----------~~Y~asKaal~~l~~~la~e  251 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGY----------TIYTMAKGALEGLTRSAALE  251 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCc----------HHHHHHHHHHHHHHHHHHHH
Confidence            987510 01116899999999988765443          38999999999999998754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.97  E-value=2.4e-30  Score=208.33  Aligned_cols=172  Identities=21%  Similarity=0.213  Sum_probs=150.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++...  +.++.++++|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988777777777654  4578999999999999999999999


Q ss_pred             hhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|+||||||+..   +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||.++..+.++.
T Consensus        86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~  160 (260)
T 3awd_A           86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-----KQGVIVAIGSMSGLIVNRPQ  160 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCSSS
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEecchhcccCCCC
Confidence            99999999999999753   45577899999999999999999999999999876     57899999999887764332


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              +...|+.||++++++++.++..
T Consensus       161 --------~~~~Y~~sK~a~~~~~~~l~~e  182 (260)
T 3awd_A          161 --------QQAAYNASKAGVHQYIRSLAAE  182 (260)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CccccHHHHHHHHHHHHHHHHH
Confidence                    2358999999999999988654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.97  E-value=9.8e-31  Score=211.71  Aligned_cols=169  Identities=12%  Similarity=0.081  Sum_probs=146.9

Q ss_pred             CCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        26 ~~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ..++++|++|||||+  +|||.+++++|+++|++|++++|+.+. .+..+++..+.+..++.++++|++|++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL-EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            356889999999999  669999999999999999999998544 44455555565555899999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991          104 YNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      +.+.++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|++       +|+||++||..+..
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~  153 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-------GGSIVTLTYLGGEL  153 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGTS
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CceEEEEecccccc
Confidence            9999999999999999863      4457799999999999999999999999999863       68999999999988


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.++..          .|+.||+++++|++.++..
T Consensus       154 ~~~~~~----------~Y~asKaa~~~~~~~la~e  178 (266)
T 3oig_A          154 VMPNYN----------VMGVAKASLDASVKYLAAD  178 (266)
T ss_dssp             CCTTTH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcc----------hhHHHHHHHHHHHHHHHHH
Confidence            755443          8999999999999998764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=5.6e-31  Score=214.00  Aligned_cols=165  Identities=24%  Similarity=0.333  Sum_probs=143.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++      ..+.++++|++|+++++++++++.
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999976655444332      237889999999999999999999


Q ss_pred             hhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|+||||||+..   +..+.+.++|++.+++|+.+++.+++.++|+|.++      .|+||++||..+..+.++.
T Consensus        78 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~  151 (270)
T 1yde_A           78 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIGQAQA  151 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHCCTTC
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEcCccccCCCCCC
Confidence            99999999999999853   44577899999999999999999999999999864      6899999999888765443


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||++++++++.++..
T Consensus       152 ----------~~Y~asKaa~~~~~~~la~e  171 (270)
T 1yde_A          152 ----------VPYVATKGAVTAMTKALALD  171 (270)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------cccHHHHHHHHHHHHHHHHH
Confidence                      38999999999999998753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.97  E-value=3.4e-30  Score=209.77  Aligned_cols=174  Identities=19%  Similarity=0.210  Sum_probs=148.5

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ++..++++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++++|++|++++++++++
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~  104 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQ  104 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHH
Confidence            3445689999999999999999999999999999999999988777766666544  56788999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC---CCC-CCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          104 YNIQHHQLNILINNAGIMG---TPF-MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~---~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +.+.++++|+||||||+..   +.. +.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.
T Consensus       105 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~  179 (279)
T 3ctm_A          105 QEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-----GKGSLIITSSISGKIVN  179 (279)
T ss_dssp             HHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCCTTSCC-
T ss_pred             HHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEECchHhccCC
Confidence            9999999999999999863   333 66789999999999999999999999999876     57899999999887651


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +        ..+...|+.||++++++++.+...
T Consensus       180 ~--------~~~~~~Y~~sK~a~~~~~~~la~e  204 (279)
T 3ctm_A          180 I--------PQLQAPYNTAKAACTHLAKSLAIE  204 (279)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--------CCCcccHHHHHHHHHHHHHHHHHH
Confidence            0        123348999999999999988753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.97  E-value=1.1e-30  Score=211.57  Aligned_cols=157  Identities=22%  Similarity=0.249  Sum_probs=140.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.++++.|+++|++|++++|+.++             +.++.++++|++|+++++++++++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998754             245788999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++    
T Consensus        72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~----  142 (264)
T 2dtx_A           72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-----RDPSIVNISSVQASIITKN----  142 (264)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSCEEEEECCGGGTSCCTT----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECCchhccCCCC----
Confidence            999999999999863  45678999999999999999999999999999875     5789999999988876443    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||+++++|++.++..
T Consensus       143 ------~~~Y~~sK~a~~~~~~~la~e  163 (264)
T 2dtx_A          143 ------ASAYVTSKHAVIGLTKSIALD  163 (264)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999988753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.97  E-value=1.3e-30  Score=210.43  Aligned_cols=166  Identities=20%  Similarity=0.173  Sum_probs=145.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh-
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ-  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-  107 (216)
                      +++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+. 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            67899999999999999999999999999999999988888877777665  567899999999999999999998876 


Q ss_pred             cCCccEEEECCc--cC-------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          108 HHQLNILINNAG--IM-------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       108 ~~~id~li~~Ag--~~-------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++++|+||||||  +.       .+..+.+.++|++++++|+.+++.+++.++|.|.++     +.|+||++||..+..+
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~  155 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-----GQGLIVVISSPGSLQY  155 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-----TCCEEEEECCGGGTSC
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-----CCcEEEEEcChhhcCC
Confidence            899999999995  32       355677889999999999999999999999999875     5799999999887653


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .           +...|+.||+++++|++.++..
T Consensus       156 ~-----------~~~~Y~asK~a~~~~~~~la~e  178 (260)
T 2qq5_A          156 M-----------FNVPYGVGKAACDKLAADCAHE  178 (260)
T ss_dssp             C-----------SSHHHHHHHHHHHHHHHHHHHH
T ss_pred             C-----------CCCchHHHHHHHHHHHHHHHHH
Confidence            2           2348999999999999998753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.97  E-value=1.4e-30  Score=212.64  Aligned_cols=168  Identities=12%  Similarity=0.108  Sum_probs=145.6

Q ss_pred             CCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .+..+++|++|||||+  +|||.++|++|+++|++|++++|+.  .++..+++..+.  .++.++++|++|+++++++++
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHH
Confidence            3456889999999998  7899999999999999999999997  456666776664  347899999999999999999


Q ss_pred             HHHhhcCCccEEEECCccCCC------CCC-CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          103 EYNIQHHQLNILINNAGIMGT------PFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~------~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++.+.++++|+||||||+..+      ..+ .+.++|++++++|+.+++.+++.++|.|.++      .|+||++||..+
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~  169 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR------NASMVALTYIGA  169 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------TCEEEEEECGGG
T ss_pred             HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCeEEEEecccc
Confidence            999999999999999998632      223 7899999999999999999999999999863      789999999999


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+.++.          ..|+.||+++++|++.++..
T Consensus       170 ~~~~~~~----------~~Y~asKaal~~~~~~la~e  196 (280)
T 3nrc_A          170 EKAMPSY----------NTMGVAKASLEATVRYTALA  196 (280)
T ss_dssp             TSCCTTT----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCc----------hhhHHHHHHHHHHHHHHHHH
Confidence            8875544          38999999999999988754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.97  E-value=1.9e-30  Score=209.75  Aligned_cols=169  Identities=20%  Similarity=0.275  Sum_probs=140.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.+|++|||||++|||.+++++|+++|++|++++|+.+...+...+..... +.++.++++|++|+++++++++++.+.
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3457999999999999999999999999999999888655444433333332 467999999999999999999999999


Q ss_pred             cCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc--ccccC
Q 027991          108 HHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR--LAYHE  181 (216)
Q Consensus       108 ~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--~~~~~  181 (216)
                      ++++|+||||||+.    .+..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+.  .+.  
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~~~~~--  155 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-----NFGRIINYGFQGADSAPGW--  155 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTTGGGCCCC--
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCeEEEEeechhcccCCC--
Confidence            99999999999943    345577999999999999999999999999999987     67999999987332  222  


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              .....|+.||+++++|++.++..
T Consensus       156 --------~~~~~Y~asKaa~~~~~~~la~e  178 (264)
T 3i4f_A          156 --------IYRSAFAAAKVGLVSLTKTVAYE  178 (264)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHH
Confidence                    23448999999999999988754

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.6e-30  Score=211.34  Aligned_cols=170  Identities=25%  Similarity=0.250  Sum_probs=148.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|+++++++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999988887777777654  4578999999999999999999999


Q ss_pred             hhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++. 
T Consensus       104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~~-  177 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----NHGHIVTVASAAGHVSVPFL-  177 (272)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCC-CCCHHHH-
T ss_pred             HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEechhhcCCCCCc-
Confidence            99999999999999863  34456788999999999999999999999999876     57899999999887764433 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||++++++++.++..
T Consensus       178 ---------~~Y~~sK~a~~~l~~~la~e  197 (272)
T 1yb1_A          178 ---------LAYCSSKFAAVGFHKTLTDE  197 (272)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHH
Confidence                     38999999999999988653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.97  E-value=4.5e-30  Score=210.06  Aligned_cols=168  Identities=24%  Similarity=0.256  Sum_probs=146.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... ..++.++.+|++|+++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999888887777776542 34789999999999999999999999


Q ss_pred             hcCCccEEEEC-CccCC-CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINN-AGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~-Ag~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|++||| +|... +..+.+.+++++.+++|+.+++.+++.++|.|.++      .|+||++||.++..+.++   
T Consensus       103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~~---  173 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVAYPM---  173 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSCCTT---
T ss_pred             HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC------CCEEEEECCcccccCCCC---
Confidence            99999999999 67653 34456899999999999999999999999999864      589999999988876543   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ...|+.||++++++++.++.
T Consensus       174 -------~~~Y~asK~a~~~~~~~l~~  193 (286)
T 1xu9_A          174 -------VAAYSASKFALDGFFSSIRK  193 (286)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHH
T ss_pred             -------ccHHHHHHHHHHHHHHHHHH
Confidence                   34899999999999998764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.97  E-value=1.7e-30  Score=207.66  Aligned_cols=170  Identities=29%  Similarity=0.283  Sum_probs=148.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.... +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887777776665432 45788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.++   
T Consensus        82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~---  153 (248)
T 2pnf_A           82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-----RWGRIVNISSVVGFTGNVG---  153 (248)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-----TCEEEEEECCHHHHHCCTT---
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhcCCCCC---
Confidence            9999999999999863  34567899999999999999999999999999876     5789999999888776443   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.||++++++++.++..
T Consensus       154 -------~~~Y~~sK~a~~~~~~~la~e  174 (248)
T 2pnf_A          154 -------QVNYSTTKAGLIGFTKSLAKE  174 (248)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------CchHHHHHHHHHHHHHHHHHH
Confidence                   348999999999999988653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.97  E-value=8.3e-31  Score=211.16  Aligned_cols=162  Identities=22%  Similarity=0.224  Sum_probs=136.7

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      ..+...+.+|++|||||++|||.+++++|+++|++|++++|+.++++             .+.++++|++|+++++++++
T Consensus        13 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~   79 (253)
T 2nm0_A           13 GLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYK   79 (253)
T ss_dssp             -------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHH
Confidence            34445678999999999999999999999999999999999876543             25789999999999999999


Q ss_pred             HHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          103 EYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      ++.+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|.|.++     +.|+||++||..+..+.+
T Consensus        80 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~  154 (253)
T 2nm0_A           80 EIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-----KKGRVVLISSVVGLLGSA  154 (253)
T ss_dssp             HHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCCCCCHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCCCCC
Confidence            99999999999999999863  45577889999999999999999999999999876     578999999998887654


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.          ..|+.||+++++|++.++..
T Consensus       155 ~~----------~~Y~asK~a~~~~~~~la~e  176 (253)
T 2nm0_A          155 GQ----------ANYAASKAGLVGFARSLARE  176 (253)
T ss_dssp             HH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             Cc----------HHHHHHHHHHHHHHHHHHHH
Confidence            43          38999999999999988754

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.97  E-value=5.6e-31  Score=212.29  Aligned_cols=167  Identities=20%  Similarity=0.156  Sum_probs=135.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.++   ..+++     +.++.++++|++|+++++++++.+.+
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADL-----GDRARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHT-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhc-----CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999996543   22222     56789999999999999999998877


Q ss_pred             hcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc---CCCCcEEEEEcCCcccc
Q 027991          107 QHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK---SGGEGRIINVSSEGHRL  177 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~---~~~~g~iv~isS~~~~~  177 (216)
                       ++++|+||||||+..      +..+.+.++|++++++|+.+++.+++.++|.|.++...   ..+.|+||++||..+..
T Consensus        77 -~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 -MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD  155 (257)
T ss_dssp             -HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred             -hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence             899999999999863      22357899999999999999999999999999873110   12578999999999988


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.++..          .|+.||+++++|++.++..
T Consensus       156 ~~~~~~----------~Y~asKaa~~~~~~~la~e  180 (257)
T 3tl3_A          156 GQIGQA----------AYSASKGGVVGMTLPIARD  180 (257)
T ss_dssp             CHHHHH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCc----------cHHHHHHHHHHHHHHHHHH
Confidence            765443          8999999999999998754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.97  E-value=4e-30  Score=207.93  Aligned_cols=169  Identities=21%  Similarity=0.201  Sum_probs=140.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +.+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777777654  45788999999999999999999999


Q ss_pred             hc-CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QH-HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~-~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .+ +++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.++  
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~--  160 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVVSASV--  160 (266)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC------------
T ss_pred             HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccchhccCCCC--
Confidence            88 89999999999863  45677899999999999999999999999999876     5789999999988776443  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||++++++++.++..
T Consensus       161 --------~~~Y~~sK~a~~~~~~~la~e  181 (266)
T 1xq1_A          161 --------GSIYSATKGALNQLARNLACE  181 (266)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CchHHHHHHHHHHHHHHHHHH
Confidence                    348999999999999988653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.97  E-value=3.6e-30  Score=210.62  Aligned_cols=170  Identities=26%  Similarity=0.256  Sum_probs=149.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|++|||||++|||.++++.|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999888777777777554  5578899999999999999999999


Q ss_pred             hhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +.++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++  
T Consensus       117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~--  189 (285)
T 2c07_A          117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLTGNVG--  189 (285)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTT--
T ss_pred             HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhccCCCC--
Confidence            99999999999999863  45677899999999999999999999999999876     5689999999988876543  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||++++++++.++..
T Consensus       190 --------~~~Y~asK~a~~~~~~~la~e  210 (285)
T 2c07_A          190 --------QANYSSSKAGVIGFTKSLAKE  210 (285)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CchHHHHHHHHHHHHHHHHHH
Confidence                    348999999999999988753

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.97  E-value=2e-30  Score=210.02  Aligned_cols=169  Identities=14%  Similarity=0.109  Sum_probs=145.6

Q ss_pred             CCCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      .+...+++|++|||||+  +|||.+++++|+++|++|++++|+.. ..+..+++..+.  .++.++++|++|++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEF--GSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHc--CCcEEEECCCCCHHHHHHHH
Confidence            34567889999999999  99999999999999999999999954 455566666664  34789999999999999999


Q ss_pred             HHHHhhcCCccEEEECCccCC------CCCC-CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          102 SEYNIQHHQLNILINNAGIMG------TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~------~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      +++.+.++++|+||||||+..      +..+ .+.++|++.+++|+.+++.+++.++|.|++       .|+||++||..
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~  156 (271)
T 3ek2_A           84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLG  156 (271)
T ss_dssp             HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-------EEEEEEEECGG
T ss_pred             HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-------CceEEEEeccc
Confidence            999999999999999999863      3444 899999999999999999999999999873       68999999999


Q ss_pred             ccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          175 HRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +..+.++.          ..|+.||+++++|++.++..
T Consensus       157 ~~~~~~~~----------~~Y~asKaa~~~~~~~la~e  184 (271)
T 3ek2_A          157 AERAIPNY----------NTMGLAKAALEASVRYLAVS  184 (271)
T ss_dssp             GTSBCTTT----------THHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCc----------cchhHHHHHHHHHHHHHHHH
Confidence            98875554          38999999999999998754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.97  E-value=2.6e-30  Score=211.42  Aligned_cols=166  Identities=16%  Similarity=0.145  Sum_probs=144.1

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|++|||||+  +|||.++++.|+++|++|++++|+.+ .++..+++..+.+  .+.++++|++|+++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999875 5556666666543  36789999999999999999999


Q ss_pred             hhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          106 IQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +.++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|.+      .+|+||++||..+..+.
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~------~~g~iv~isS~~~~~~~  168 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG------RNGAIVTLSYYGAEKVV  168 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT------SCCEEEEEECGGGTSBC
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH------cCCEEEEEccchhccCC
Confidence            99999999999999863      3447789999999999999999999999999975      26899999998888765


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++.          ..|+.||+++++|++.++..
T Consensus       169 ~~~----------~~Y~~sK~a~~~~~~~la~e  191 (285)
T 2p91_A          169 PHY----------NVMGIAKAALESTVRYLAYD  191 (285)
T ss_dssp             TTT----------THHHHHHHHHHHHHHHHHHH
T ss_pred             CCc----------cHHHHHHHHHHHHHHHHHHH
Confidence            443          37999999999999988754

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.97  E-value=2.6e-30  Score=210.83  Aligned_cols=174  Identities=16%  Similarity=0.142  Sum_probs=146.9

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      ++++.++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~   96 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIE   96 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHH
Confidence            44556789999999999999999999999999999999999988777766665     4578999999999999999999


Q ss_pred             HHHhhcCCccEEEEC-CccCC--CC-----CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-cCCCCcEEEEEcCC
Q 027991          103 EYNIQHHQLNILINN-AGIMG--TP-----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSSE  173 (216)
Q Consensus       103 ~~~~~~~~id~li~~-Ag~~~--~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~isS~  173 (216)
                      ++ +.++++|++||| +|+..  +.     .+.+.++|++.+++|+.+++++++.+++.|.+... ...+.|+||++||.
T Consensus        97 ~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           97 AA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             HH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             HH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence            99 888999999999 55532  11     25788999999999999999999999999986321 12257899999999


Q ss_pred             cccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          174 GHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+..+.++.          ..|+.||+++++|++.++..
T Consensus       176 ~~~~~~~~~----------~~Y~asKaa~~~~~~~la~e  204 (281)
T 3ppi_A          176 AGYEGQIGQ----------TAYAAAKAGVIGLTIAAARD  204 (281)
T ss_dssp             GGTSCCTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCC----------cccHHHHHHHHHHHHHHHHH
Confidence            998875544          38999999999999988764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.97  E-value=3.8e-30  Score=207.38  Aligned_cols=168  Identities=23%  Similarity=0.293  Sum_probs=146.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++| +.+..++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999 766666666666544  56788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|+||||||...  +..+.+.++|++.+++|+.+++.+++.++|.|.++     + .|+||++||..+..+.++  
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~~--  154 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN-----DIKGTVINMSSVHEKIPWPL--  154 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCCEEEEECCGGGTSCCTT--
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCCCEEEEeCCHHhcCCCCC--
Confidence            9999999999999863  34567899999999999999999999999999875     3 689999999888765433  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||++++++++.+...
T Consensus       155 --------~~~Y~~sK~a~~~~~~~la~e  175 (261)
T 1gee_A          155 --------FVHYAASKGGMKLMTETLALE  175 (261)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHH
Confidence                    348999999999999887653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.97  E-value=2.6e-30  Score=206.67  Aligned_cols=168  Identities=23%  Similarity=0.261  Sum_probs=130.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|++|||||++|||.+++++|+++|++|+++ .|+.+..++..+++...  +.++.++++|++|+++++++++++.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMD   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999 56666677766666554  56789999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.  
T Consensus        80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~--  152 (247)
T 2hq1_A           80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-----KSGKIINITSIAGIIGNAGQ--  152 (247)
T ss_dssp             HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECC---------C--
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhccCCCCC--
Confidence            9999999999999863  34567888999999999999999999999999876     57899999999888765443  


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ..|+.||++++++++.++..
T Consensus       153 --------~~Y~~sK~a~~~~~~~la~e  172 (247)
T 2hq1_A          153 --------ANYAASKAGLIGFTKSIAKE  172 (247)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------cHhHHHHHHHHHHHHHHHHH
Confidence                    48999999999999988653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.97  E-value=7.4e-30  Score=204.81  Aligned_cols=169  Identities=25%  Similarity=0.273  Sum_probs=145.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeE-EEEEccCCCHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV-DAMELDLSSLASVRNFASE  103 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +.+++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++ .++.+|++|++++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHH
Confidence            345688999999999999999999999999999999999987766665554     2345 8899999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+ ++++|+||||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++
T Consensus        80 ~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~  153 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-----GAGAIVNLGSMSGTIVNRP  153 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCSS
T ss_pred             HHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEecchhccCCCC
Confidence            988 899999999999863  45577899999999999999999999999999886     5789999999988776443


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .        +...|+.||++++++++.+...
T Consensus       154 ~--------~~~~Y~~sK~a~~~~~~~~~~~  176 (254)
T 2wsb_A          154 Q--------FASSYMASKGAVHQLTRALAAE  176 (254)
T ss_dssp             S--------CBHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--------cchHHHHHHHHHHHHHHHHHHH
Confidence            2        2358999999999999988653

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.97  E-value=5.5e-30  Score=204.54  Aligned_cols=165  Identities=24%  Similarity=0.315  Sum_probs=145.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +|++|||||++|||.+++++|+++|+       +|++++|+.++.+...+++...  +.++.++.+|++|++++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHH
Confidence            68999999999999999999999999       9999999988777777766543  56789999999999999999999


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+.++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~  154 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATKAFRH  154 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecchhcCCCCC
Confidence            9999999999999999863  34567899999999999999999999999999876     5789999999988876443


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ...|+.||++++++++.++..
T Consensus       155 ----------~~~Y~~sK~a~~~~~~~la~e  175 (244)
T 2bd0_A          155 ----------SSIYCMSKFGQRGLVETMRLY  175 (244)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHH
Confidence                      348999999999999888653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=7.2e-31  Score=212.61  Aligned_cols=162  Identities=22%  Similarity=0.210  Sum_probs=138.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++     ..++.++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999977665544332     256889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.| +      ..|+||++||..+. +.++.   
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~------~~g~iv~isS~~~~-~~~~~---  146 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-E------EGGSLVLTGSVAGL-GAFGL---  146 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-C------TTCEEEEECCCTTC-CHHHH---
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-h------cCCEEEEEecchhc-CCCCc---
Confidence            999999999999863  45677899999999999999999999999999 4      26899999999887 54432   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       147 -------~~Y~asK~a~~~~~~~la~e  166 (263)
T 2a4k_A          147 -------AHYAAGKLGVVGLARTLALE  166 (263)
T ss_dssp             -------HHHHHCSSHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHHHH
Confidence                   38999999999999988754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.97  E-value=8.2e-30  Score=204.76  Aligned_cols=158  Identities=25%  Similarity=0.299  Sum_probs=139.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+.         ...   .+.++.+|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~~---~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQY---PFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SCC---SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hcC---CceEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998652         111   2678899999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+.  .+..+.+.++|++.+++|+.+++.++++++|.|+++     +.|+||++||..+..+.++    
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~----  142 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-----RGGAIVTVASDAAHTPRIG----  142 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCTT----
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCCCCCC----
Confidence            99999999999986  345678999999999999999999999999999886     5799999999988876443    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||+++++|++.++..
T Consensus       143 ------~~~Y~~sK~a~~~~~~~la~e  163 (250)
T 2fwm_X          143 ------MSAYGASKAALKSLALSVGLE  163 (250)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999988653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.97  E-value=4.2e-30  Score=206.15  Aligned_cols=158  Identities=20%  Similarity=0.245  Sum_probs=134.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.++.++             +..+++|++|+++++++++++.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998765432             11488999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++   
T Consensus        78 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~---  149 (247)
T 1uzm_A           78 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----KFGRMIFIGSVSGLWGIGN---  149 (247)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCCC-----C---
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEECCHhhccCCCC---
Confidence            9999999999999863  45678999999999999999999999999999875     5789999999998876544   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ...|+.||+++++|++.++..
T Consensus       150 -------~~~Y~~sK~a~~~~~~~la~e  170 (247)
T 1uzm_A          150 -------QANYAASKAGVIGMARSIARE  170 (247)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------ChhHHHHHHHHHHHHHHHHHH
Confidence                   348999999999999988654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.97  E-value=2.2e-30  Score=210.90  Aligned_cols=165  Identities=13%  Similarity=0.111  Sum_probs=144.0

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ++++|++|||||+  +|||.++++.|+++|++|++++|+.+ .++..+++....+  ++.++++|++|+++++++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHH
Confidence            4779999999999  99999999999999999999999976 5566666766543  37889999999999999999999


Q ss_pred             hhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          106 IQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +.++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|.+       +|+||++||..+..+.
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-------GASVLTLSYLGSTKYM  152 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSBC
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEecchhcCCC
Confidence            99999999999999863      3457889999999999999999999999999963       5899999999887765


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++.          ..|+.||+++++|++.++..
T Consensus       153 ~~~----------~~Y~asK~a~~~~~~~la~e  175 (275)
T 2pd4_A          153 AHY----------NVMGLAKAALESAVRYLAVD  175 (275)
T ss_dssp             TTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCc----------hhhHHHHHHHHHHHHHHHHH
Confidence            433          38999999999999988754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1e-29  Score=207.20  Aligned_cols=175  Identities=24%  Similarity=0.227  Sum_probs=148.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.......++.++.+|++|+++++++++++.+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999888887777776653345788999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++.   .++|+||++||..+....+    
T Consensus       108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~---~~~g~iv~isS~~~~~~~~----  180 (279)
T 1xg5_A          108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN---VDDGHIININSMSGHRVLP----  180 (279)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CCSCEEEEECCGGGTSCCS----
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCCceEEEEcChhhcccCC----
Confidence            9999999999999863  455778999999999999999999999999998751   0138999999988763211    


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ..+...|+.||+++++|++.++..
T Consensus       181 ----~~~~~~Y~~sK~a~~~~~~~la~e  204 (279)
T 1xg5_A          181 ----LSVTHFYSATKYAVTALTEGLRQE  204 (279)
T ss_dssp             ----CGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHH
Confidence                122348999999999999988653

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.97  E-value=5.1e-30  Score=206.83  Aligned_cols=178  Identities=23%  Similarity=0.240  Sum_probs=150.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++..+. +.++.++++|++|+++++++++++.+
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998777666666665544 45789999999999999999999999


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .++++|+||||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.++    +..|+||++||..+..+.+... 
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~~~~-  163 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK----QQKGSIVVTSSMSSQIINQSSL-  163 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCEEET-
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhc----CCCceEEEeCCchhhccccccc-
Confidence            9999999999999863  44567899999999999999999999999999875    1248999999988876543211 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                        ....+...|+.||++++++++.++..
T Consensus       164 --~~~~~~~~Y~~sK~a~~~~~~~la~e  189 (265)
T 1h5q_A          164 --NGSLTQVFYNSSKAACSNLVKGLAAE  189 (265)
T ss_dssp             --TEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --cccccccccHHHHHHHHHHHHHHHHH
Confidence              22334568999999999999988653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=8.5e-30  Score=204.42  Aligned_cols=168  Identities=27%  Similarity=0.347  Sum_probs=147.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777777777654  45788999999999999999999999


Q ss_pred             hcCCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          107 QHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      .++++|+||||||...+ ..+.+.+++++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.++    
T Consensus        85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~----  155 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAENKNIN----  155 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCTT----
T ss_pred             hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcCCCCC----
Confidence            99999999999998632 2367899999999999999999999999999876     5789999999888765433    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                            ...|+.||++++.+++.+..
T Consensus       156 ------~~~Y~~sK~a~~~~~~~~~~  175 (255)
T 1fmc_A          156 ------MTSYASSKAAASHLVRNMAF  175 (255)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CcccHHHHHHHHHHHHHHHH
Confidence                  34899999999999998864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.97  E-value=8.3e-30  Score=209.63  Aligned_cols=173  Identities=20%  Similarity=0.125  Sum_probs=150.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +...+++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++...+ +.++.++++|++|+++++++++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   98 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSEL   98 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHH
Confidence            4456889999999999999999999999999999999999888887777776653 457899999999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.++++|+||||||..  .+..+.+.+++++.+++|+.+++.+++.++|.|.++    .+.++||++||.++..+.++ 
T Consensus        99 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~isS~~~~~~~~~-  173 (302)
T 1w6u_A           99 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIYAETGSGF-  173 (302)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTHHHHCCTT-
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----cCCCEEEEEcccccccCCCC-
Confidence            99999999999999975  344567899999999999999999999999999743    14689999999988776433 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ...|+.||++++++++.++..
T Consensus       174 ---------~~~Y~~sK~a~~~~~~~la~~  194 (302)
T 1w6u_A          174 ---------VVPSASAKAGVEAMSKSLAAE  194 (302)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------cchhHHHHHHHHHHHHHHHHH
Confidence                     348999999999999988653

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.97  E-value=3.4e-30  Score=206.55  Aligned_cols=165  Identities=25%  Similarity=0.315  Sum_probs=133.1

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ....+.++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++     ..++.+..+|+++.+++++++++
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHT
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHh
Confidence            3445688999999999999999999999999999999999988777666555     35688999999999999888764


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      .    +++|++|||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++
T Consensus        82 ~----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~  152 (249)
T 3f9i_A           82 T----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-----RYGRIINISSIVGIAGNPG  152 (249)
T ss_dssp             C----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCC--CCSC
T ss_pred             c----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcEEEEEccHHhccCCCC
Confidence            3    68999999999864  34567889999999999999999999999999886     6799999999999887554


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .          ..|+.||+++++|++.++..
T Consensus       153 ~----------~~Y~~sK~a~~~~~~~la~e  173 (249)
T 3f9i_A          153 Q----------ANYCASKAGLIGMTKSLSYE  173 (249)
T ss_dssp             S----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             C----------chhHHHHHHHHHHHHHHHHH
Confidence            4          38999999999999988754

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.97  E-value=2.9e-30  Score=208.30  Aligned_cols=171  Identities=24%  Similarity=0.246  Sum_probs=144.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc-----CCCeEEEEEccCCCHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-----PSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      .++++|++|||||++|||.++++.|+++|++|++++|+.++.++..+++....     +..++.++++|++|++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999999877666555443321     1156889999999999999999


Q ss_pred             HHHHhhcCCc-cEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccc
Q 027991          102 SEYNIQHHQL-NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRL  177 (216)
Q Consensus       102 ~~~~~~~~~i-d~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~  177 (216)
                      +++.+.++++ |+||||||...  +..+.+.+++++.+++|+.+++.++++++|.|.++     + .|+||++||..+..
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~g~iv~isS~~~~~  157 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSN-----GCRGSIINISSIVGKV  157 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEEECCTHHHH
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----CCCceEEEECChhhcc
Confidence            9999999999 99999999863  34567899999999999999999999999999876     4 68999999998887


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.++          ...|+.||++++++++.++..
T Consensus       158 ~~~~----------~~~Y~~sK~a~~~~~~~la~e  182 (264)
T 2pd6_A          158 GNVG----------QTNYAASKAGVIGLTQTAARE  182 (264)
T ss_dssp             CCTT----------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC----------ChhhHHHHHHHHHHHHHHHHH
Confidence            6543          348999999999999988653

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.97  E-value=2.6e-30  Score=208.93  Aligned_cols=166  Identities=13%  Similarity=0.125  Sum_probs=143.3

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .++++|++|||||+  +|||.+++++|+++|++|++++|+.+ .++..+++..+.+  .+.++++|++|+++++++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHH
Confidence            35789999999999  99999999999999999999999875 5555666665543  3688999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          105 NIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      .+.++++|+||||||+..      +..+.+.++|++.+++|+.+++.++++++|.|.+       +|+||++||..+..+
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~  153 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEKV  153 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTSB
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-------CCEEEEEecccccCC
Confidence            999999999999999863      3457789999999999999999999999999863       589999999888776


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .++.          ..|+.||+++++|++.++..
T Consensus       154 ~~~~----------~~Y~asK~a~~~~~~~la~e  177 (261)
T 2wyu_A          154 VPKY----------NVMAIAKAALEASVRYLAYE  177 (261)
T ss_dssp             CTTC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCc----------hHHHHHHHHHHHHHHHHHHH
Confidence            4433          38999999999999988754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=1.9e-30  Score=231.86  Aligned_cols=167  Identities=23%  Similarity=0.242  Sum_probs=143.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC---------cchHHHHHHHHhhcCCCeEEEEEccCCCHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI---------AAGKDVKETIVKEIPSAKVDAMELDLSSLASV   97 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   97 (216)
                      .++++|+++||||++|||+++|+.|+++|++|++++|+.         +.++++.+++...  +.+.   .+|++|.+++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHHH
Confidence            457899999999999999999999999999999998765         5567777777654  3332   3688888889


Q ss_pred             HHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991           98 RNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus        98 ~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +++++++.+.+|+||+||||||+.  .++.+++.++|+++|++|+.|+|.++|+++|+|+++     +.|+||++||.++
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-----~~G~IVnisS~ag  153 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-----KYGRIVNTSSPAG  153 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCHHH
Confidence            999999999999999999999986  356788999999999999999999999999999986     5799999999999


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      ..+.++..          .|+.||+++.+|++.++...
T Consensus       154 ~~~~~~~~----------~Y~asKaal~~lt~~la~El  181 (604)
T 2et6_A          154 LYGNFGQA----------NYASAKSALLGFAETLAKEG  181 (604)
T ss_dssp             HHCCTTBH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCch----------HHHHHHHHHHHHHHHHHHHh
Confidence            88766543          89999999999999998653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.97  E-value=8.3e-30  Score=203.36  Aligned_cols=165  Identities=23%  Similarity=0.256  Sum_probs=144.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ||++|||||++|||.+++++|+++|++|+++ +|+.+..++..+++...  +.++.++++|++|+++++++++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999985 78877777777666654  45788999999999999999999999999


Q ss_pred             CccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++      
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~------  147 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLIGNIG------  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTT------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECChhhcCCCCC------
Confidence            9999999999864  34567899999999999999999999999999876     5789999999988876543      


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ...|+.||++++++++.++..
T Consensus       148 ----~~~Y~~sK~a~~~~~~~la~e  168 (244)
T 1edo_A          148 ----QANYAAAKAGVIGFSKTAARE  168 (244)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CccchhhHHHHHHHHHHHHHH
Confidence                348999999999999988754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=4.5e-30  Score=208.03  Aligned_cols=164  Identities=27%  Similarity=0.310  Sum_probs=141.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++.....+.++.++++|++|+++++++++++.+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998777766666655433457889999999999999999999999


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++++|+||||||+.      +.++|++.+++|+.+++.+++.++|.|.++.  ..+.|+||++||..+..+.++.     
T Consensus        84 ~g~id~lv~~Ag~~------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~~-----  150 (267)
T 2gdz_A           84 FGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQN--GGEGGIIINMSSLAGLMPVAQQ-----  150 (267)
T ss_dssp             HSCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCTTC-----
T ss_pred             cCCCCEEEECCCCC------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhcc--CCCCCEEEEeCCccccCCCCCC-----
Confidence            99999999999975      2467899999999999999999999998641  1126899999999888764443     


Q ss_pred             CCCCCccchHHHHHHHHHHHHH
Q 027991          188 INDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                           ..|+.||++++++++.+
T Consensus       151 -----~~Y~~sK~a~~~~~~~~  167 (267)
T 2gdz_A          151 -----PVYCASKHGIVGFTRSA  167 (267)
T ss_dssp             -----HHHHHHHHHHHHHHHHH
T ss_pred             -----chHHHHHHHHHHHHHHH
Confidence                 38999999999999985

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.97  E-value=9.1e-30  Score=203.84  Aligned_cols=166  Identities=25%  Similarity=0.267  Sum_probs=144.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||++|||.+++++|+++|++|++++|+.+++++..+++.... +.++.++++|++|+++++++++++.+.+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999999877776666552222 457899999999999999999999999999


Q ss_pred             ccEEEECCccCCC-----CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          111 LNILINNAGIMGT-----PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       111 id~li~~Ag~~~~-----~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|+||||||+..+     ..+.+.+++++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.++    
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~----  151 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-----GAGVIVNIASVASLVAFPG----  151 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT----
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhccCCCC----
Confidence            9999999998632     4467889999999999999999999999999886     5789999999988876443    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||++++++++.+...
T Consensus       152 ------~~~Y~~sK~a~~~~~~~l~~e  172 (250)
T 2cfc_A          152 ------RSAYTTSKGAVLQLTKSVAVD  172 (250)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999988643

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.97  E-value=8.7e-30  Score=204.06  Aligned_cols=166  Identities=23%  Similarity=0.247  Sum_probs=144.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            47789999999999999999999999999999999998776665555432   246889999999999999999999999


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCC-cEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGE-GRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++++|+||||||...  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +. ++||++||..+..+.++   
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~~---  151 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-----GLGASIINMSSIEGFVGDPS---  151 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSCEEEEEECCGGGTSCCTT---
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCCEEEEeCCchhccCCCC---
Confidence            999999999999863  45677899999999999999999999999999875     34 89999999988876443   


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ...|+.||++++++++.+..
T Consensus       152 -------~~~Y~~sK~a~~~~~~~~a~  171 (251)
T 1zk4_A          152 -------LGAYNASKGAVRIMSKSAAL  171 (251)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHH
T ss_pred             -------CccchHHHHHHHHHHHHHHH
Confidence                   34899999999999988764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.97  E-value=3.9e-30  Score=208.26  Aligned_cols=165  Identities=12%  Similarity=0.114  Sum_probs=142.5

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|++|||||+  +|||.+++++|+++|++|++++|+. +.++..+++....+.  ..++++|++|+++++++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS--DIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC--cEEEEccCCCHHHHHHHHHHHH
Confidence            3789999999999  9999999999999999999999987 556666666665432  3789999999999999999999


Q ss_pred             hhcCCccEEEECCccCC------CCCC-CChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          106 IQHHQLNILINNAGIMG------TPFM-LSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~------~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      +.++++|+||||||+..      +..+ .+.++|++++++|+.+++.++++++|.|.+       +|+||++||..+..+
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~  155 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA  155 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEcchhhccC
Confidence            99999999999999864      2335 788999999999999999999999999863       589999999988876


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .++.          ..|+.||+++++|++.++..
T Consensus       156 ~~~~----------~~Y~~sK~a~~~~~~~la~e  179 (265)
T 1qsg_A          156 IPNY----------NVMGLAKASLEANVRYMANA  179 (265)
T ss_dssp             CTTT----------THHHHHHHHHHHHHHHHHHH
T ss_pred             CCCc----------hHHHHHHHHHHHHHHHHHHH
Confidence            5443          38999999999999988754

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.97  E-value=7.8e-30  Score=204.86  Aligned_cols=173  Identities=20%  Similarity=0.255  Sum_probs=147.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC-CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|++|||||++|||.+++++|+++|++|++++|+ .+++++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999 77777777777654  56789999999999999999999999


Q ss_pred             hcCCccEEEECCcc-C--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccCC
Q 027991          107 QHHQLNILINNAGI-M--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEG  182 (216)
Q Consensus       107 ~~~~id~li~~Ag~-~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~  182 (216)
                      .++++|+||||||. .  .+..+.+.+++++.+++|+.+++.+++.++|.|.++.+..+..++||++||..+.. +.+  
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  159 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP--  159 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT--
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC--
Confidence            99999999999997 3  24456788999999999999999999999999987521011238999999998876 433  


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              +...|+.||++++++++.+...
T Consensus       160 --------~~~~Y~~sK~a~~~~~~~~~~e  181 (258)
T 3afn_B          160 --------GAGLYGAAKAFLHNVHKNWVDF  181 (258)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHh
Confidence                    3448999999999999987653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=2.6e-29  Score=204.16  Aligned_cols=168  Identities=22%  Similarity=0.277  Sum_probs=145.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|+++++++++++.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999987666555554421   23689999999999999999999999


Q ss_pred             hcCCccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          107 QHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .++++|+||||||...    +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.+  
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~--  161 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----KKGSIVFTASISSFTAGE--  161 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----TCEEEEEECCGGGTCCCT--
T ss_pred             HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCeEEEEeeccccCCCC--
Confidence            9999999999999863    34577889999999999999999999999999876     578999999998877644  


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             .+...|+.||++++++++.++.
T Consensus       162 -------~~~~~Y~~sK~a~~~~~~~la~  183 (278)
T 2bgk_A          162 -------GVSHVYTATKHAVLGLTTSLCT  183 (278)
T ss_dssp             -------TSCHHHHHHHHHHHHHHHHHHH
T ss_pred             -------CCCcchHHHHHHHHHHHHHHHH
Confidence                   1334899999999999998864

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.97  E-value=1.3e-29  Score=203.88  Aligned_cols=165  Identities=25%  Similarity=0.273  Sum_probs=140.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH-HHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL-ASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~  105 (216)
                      ++++|+++||||++|||.+++++|+++|++ |++++|+.+.  +..+++....++.++.++.+|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            478999999999999999999999999996 9999998642  3345555555556899999999998 99999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +.++++|+||||||+.      +.+++++.+++|+.+++.+++.++|.|.++.  ....|+||++||..+..+.++    
T Consensus        80 ~~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~----  147 (254)
T 1sby_A           80 DQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRK--GGPGGIIANICSVTGFNAIHQ----  147 (254)
T ss_dssp             HHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCTT----
T ss_pred             HhcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhc--CCCCCEEEEECchhhccCCCC----
Confidence            9999999999999974      4577999999999999999999999997641  112589999999988876444    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                            ...|+.||++++++++.++..
T Consensus       148 ------~~~Y~~sK~a~~~~~~~la~~  168 (254)
T 1sby_A          148 ------VPVYSASKAAVVSFTNSLAKL  168 (254)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------chHHHHHHHHHHHHHHHHHHH
Confidence                  348999999999999988753

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.97  E-value=2.5e-29  Score=202.86  Aligned_cols=171  Identities=19%  Similarity=0.223  Sum_probs=145.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.++.++..+++     +.++.++++|++|+++++++++++.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988877666554     45688999999999999999999999


Q ss_pred             hcCCccEEEECCccCCC--CC------CCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCcEEEEEcCCcccc
Q 027991          107 QHHQLNILINNAGIMGT--PF------MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRL  177 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~--~~------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~  177 (216)
                      .++++|+||||||+...  ..      +.+.++|++.+++|+.+++.+++.++|.|.++... ..+.|+||++||..+..
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  162 (265)
T 2o23_A           83 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  162 (265)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC
Confidence            99999999999998632  22      36889999999999999999999999999864211 11368999999998887


Q ss_pred             cccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          178 AYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       178 ~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +.++          ...|+.||++++++++.+...
T Consensus       163 ~~~~----------~~~Y~~sK~a~~~~~~~la~e  187 (265)
T 2o23_A          163 GQVG----------QAAYSASKGGIVGMTLPIARD  187 (265)
T ss_dssp             CCTT----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC----------CchhHHHHHHHHHHHHHHHHH
Confidence            6443          348999999999999988654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=1.2e-29  Score=226.69  Aligned_cols=166  Identities=22%  Similarity=0.246  Sum_probs=142.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++||||++|||+++|+.|+++|++|++.++.  .+++..+++...  +.+...+.+|++  ++.+++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            46889999999999999999999999999999999874  345666666554  456777888884  445678899999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .+|++|+||||||+.  .+..+++.++|+++|++|+.|++.++|+++|+|+++     ++|+||++||.++..+.++.. 
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~ag~~~~~~~~-  465 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-----QFGRIINITSTSGIYGNFGQA-  465 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCHHHHSCCTTBH-
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECChhhccCCCCCh-
Confidence            999999999999986  356688999999999999999999999999999876     579999999999988765543 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               .|+.||+++.+|++.++...
T Consensus       466 ---------~Y~asKaal~~lt~~la~El  485 (604)
T 2et6_A          466 ---------NYSSSKAGILGLSKTMAIEG  485 (604)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHh
Confidence                     89999999999999987643

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=3.8e-29  Score=205.88  Aligned_cols=172  Identities=20%  Similarity=0.238  Sum_probs=147.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc---CCCeEEEEEccCCCHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI---PSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ....+++|++|||||++|||.+++++|+++|++|++++|+.+++++..+++....   .+.++.++++|++|++++++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            3446889999999999999999999999999999999999888888777776532   2457999999999999999999


Q ss_pred             HHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc
Q 027991          102 SEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY  179 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  179 (216)
                      +++.+.++++|+||||||..  .+..+.+.+++++.+++|+.+++.++++++|.+.++     ..|+||++||.. ..+.
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~-~~~~  165 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVPT-KAGF  165 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCCC-TTCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----cCCeEEEEEeec-ccCC
Confidence            99999999999999999975  344567899999999999999999999999976554     368999999987 5443


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++          ...|+.+|++++++++.++..
T Consensus       166 ~~----------~~~Y~~sK~a~~~~~~~la~e  188 (303)
T 1yxm_A          166 PL----------AVHSGAARAGVYNLTKSLALE  188 (303)
T ss_dssp             TT----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             Cc----------chhhHHHHHHHHHHHHHHHHH
Confidence            32          348999999999999988764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.97  E-value=1.2e-29  Score=210.84  Aligned_cols=166  Identities=25%  Similarity=0.311  Sum_probs=142.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc---------CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR---------DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV   97 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   97 (216)
                      +++++|++|||||++|||.++++.|+++|++|+++++         +.+++++..+++...  +..   ..+|+++.+++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~~---~~~D~~~~~~~   79 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGK---AVANYDSVEAG   79 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCE---EEEECCCGGGH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CCe---EEEeCCCHHHH
Confidence            4688999999999999999999999999999999754         556667777777654  222   35899999999


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991           98 RNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus        98 ~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +++++++.+.++++|+||||||+..  +..+.+.++|+..+++|+.+++.+++.++|.|+++     +.|+||++||..+
T Consensus        80 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~grIV~vsS~~~  154 (319)
T 1gz6_A           80 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASASG  154 (319)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECChhh
Confidence            9999999999999999999999864  34567999999999999999999999999999886     5789999999988


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+.++          ...|+.||+++++|++.++..
T Consensus       155 ~~~~~~----------~~~Y~aSK~a~~~~~~~la~e  181 (319)
T 1gz6_A          155 IYGNFG----------QANYSAAKLGLLGLANTLVIE  181 (319)
T ss_dssp             HHCCTT----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCC----------CHHHHHHHHHHHHHHHHHHHH
Confidence            877543          348999999999999998754

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-29  Score=203.00  Aligned_cols=160  Identities=19%  Similarity=0.250  Sum_probs=134.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|++|||||++|||.+++++|+++|++|++++|+.+++++..     +.  .++.++++|++|++++++    +.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~--~~~~~~~~D~~~~~~~~~----~~~~   71 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-----KY--PGIQTRVLDVTKKKQIDQ----FANE   71 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-----GS--TTEEEEECCTTCHHHHHH----HHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----hc--cCceEEEeeCCCHHHHHH----HHHH
Confidence            478999999999999999999999999999999999876544332     21  267889999999999884    4455


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.++++++|.|.++     +.|+||++||..+..+.+.    
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~----  142 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSVKGVV----  142 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTBCCT----
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechHhCcCCCC----
Confidence            689999999999863  44577899999999999999999999999999876     5789999999988776431    


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           +...|+.||++++++++.++..
T Consensus       143 -----~~~~Y~~sK~a~~~~~~~la~e  164 (246)
T 2ag5_A          143 -----NRCVYSTTKAAVIGLTKSVAAD  164 (246)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----CCccHHHHHHHHHHHHHHHHHH
Confidence                 2348999999999999998753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.97  E-value=7.3e-30  Score=205.06  Aligned_cols=166  Identities=23%  Similarity=0.262  Sum_probs=144.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|++|||||++|||.+++++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|++|.++++++++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999886 56677777777777665  56889999999999999999999887


Q ss_pred             hcC------CccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          107 QHH------QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       107 ~~~------~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      .++      ++|+||||||+..  +..+.+.++|++++++|+.+++.+++.++|.|+       +.|+||++||..+..+
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------~~~~iv~isS~~~~~~  154 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR-------DNSRIINISSAATRIS  154 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE-------EEEEEEEECCGGGTSC
T ss_pred             HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC-------CCCEEEEeCChhhccC
Confidence            764      4999999999863  445679999999999999999999999999994       3689999999999887


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .++.          ..|+.||+++++|++.++..
T Consensus       155 ~~~~----------~~Y~asKaa~~~~~~~la~e  178 (255)
T 3icc_A          155 LPDF----------IAYSMTKGAINTMTFTLAKQ  178 (255)
T ss_dssp             CTTB----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCc----------chhHHhHHHHHHHHHHHHHH
Confidence            6554          38999999999999998764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.97  E-value=2.5e-29  Score=199.57  Aligned_cols=162  Identities=23%  Similarity=0.285  Sum_probs=139.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+|++|||||++|||.+++++|+++|++|++++|+.+++++..+++      .++.++.+|++|+++++++++++.+.++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999999999876655444332      2578899999999999999999999999


Q ss_pred             CccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      ++|++|||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++      
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~------  146 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-----GGGTIVNVGSLAGKNPFKG------  146 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCTTTTSCCTT------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCcEEEEECCchhcCCCCC------
Confidence            9999999999863  44567899999999999999999999999999875     5789999999988765433      


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHhh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ...|+.||++++++++.+...
T Consensus       147 ----~~~Y~~sK~a~~~~~~~la~e  167 (234)
T 2ehd_A          147 ----GAAYNASKFGLLGLAGAAMLD  167 (234)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CchhhHHHHHHHHHHHHHHHH
Confidence                348999999999999888653

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.97  E-value=5.3e-30  Score=210.16  Aligned_cols=170  Identities=41%  Similarity=0.553  Sum_probs=143.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++.+++||++|||||++|||.+++++|+++|++|++++|+.++.++..+++     +.++.++++|++|.++++++++++
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhc
Confidence            455689999999999999999999999999999999999987766554433     568999999999999999998876


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                          +++|+||||||+..+..+.+.++|++++++|+.+++.+++.++|.|.+         +||++||.++..+.+....
T Consensus        85 ----~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---------riv~isS~~~~~~~~~~~~  151 (291)
T 3rd5_A           85 ----SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD---------RVVTVSSMAHWPGRINLED  151 (291)
T ss_dssp             ----CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE---------EEEEECCGGGTTCCCCSSC
T ss_pred             ----CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------heeEeechhhccCCCCccc
Confidence                689999999999877777789999999999999999999999999864         8999999988876544332


Q ss_pred             CC---CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FD---KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~---~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..   ....+...|+.||+++++|++.++..
T Consensus       152 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  182 (291)
T 3rd5_A          152 LNWRSRRYSPWLAYSQSKLANLLFTSELQRR  182 (291)
T ss_dssp             TTCSSSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            22   22334558999999999999988653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.97  E-value=2.5e-29  Score=200.60  Aligned_cols=165  Identities=22%  Similarity=0.224  Sum_probs=143.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEE-EEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDA-MELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +|+++||||++|||.+++++|+++|++|+++ +|+.++.++..+++...  +.++.. +.+|++|+++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999998 78877777776666554  345556 8999999999999999999999


Q ss_pred             CCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|++|||||+..  +..+.+.+++++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.++     
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~-----  148 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-----RFGRIVNITSVVGILGNPG-----  148 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCSS-----
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----CCCEEEEEeChhhccCCCC-----
Confidence            99999999999863  34567899999999999999999999999999876     5689999999988876543     


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                           ...|+.||++++++++.+...
T Consensus       149 -----~~~Y~~sK~a~~~~~~~la~e  169 (245)
T 2ph3_A          149 -----QANYVASKAGLIGFTRAVAKE  169 (245)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----CcchHHHHHHHHHHHHHHHHH
Confidence                 348999999999999988654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.97  E-value=5.5e-29  Score=198.58  Aligned_cols=158  Identities=22%  Similarity=0.240  Sum_probs=137.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||++|||.+++++|+++|++|++++|+.++   ..+++     +  +.++++|++| ++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999765   22222     2  6788999999 9999999999999999


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|+||||||+.  .+..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.+        
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--------  137 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-----GWGRVLFIGSVTTFTAGG--------  137 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT--------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhccCCC--------
Confidence            99999999986  355678999999999999999999999999999886     578999999998877541        


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+...|+.||+++++|++.++..
T Consensus       138 ~~~~~~Y~~sK~a~~~~~~~la~e  161 (239)
T 2ekp_A          138 PVPIPAYTTAKTALLGLTRALAKE  161 (239)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHH
Confidence            123458999999999999988754

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.97  E-value=1.4e-29  Score=205.53  Aligned_cols=164  Identities=18%  Similarity=0.154  Sum_probs=138.0

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~--s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..+++|++|||||  ++|||.+++++|+++|++|++++|+.++.   .+++..+. +.++.++++|++|+++++++++++
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRL-PAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHhc-CCCceEEEccCCCHHHHHHHHHHH
Confidence            3578999999999  99999999999999999999999987542   12333333 346788999999999999999999


Q ss_pred             HhhcC---CccEEEECCccCC-------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          105 NIQHH---QLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       105 ~~~~~---~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      .+.++   ++|+||||||+..       +..+.+.++|++.+++|+.+++.+++.++|.|.+       .|+||++||..
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~iss~~  151 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-------GGSIVGMDFDP  151 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECCC
T ss_pred             HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCeEEEEcCcc
Confidence            99999   9999999999864       4457789999999999999999999999999964       47999999876


Q ss_pred             ccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          175 HRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      + .+.+          ....|+.||+++++|++.++..
T Consensus       152 ~-~~~~----------~~~~Y~asKaa~~~l~~~la~e  178 (269)
T 2h7i_A          152 S-RAMP----------AYNWMTVAKSALESVNRFVARE  178 (269)
T ss_dssp             S-SCCT----------TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-cccC----------chHHHHHHHHHHHHHHHHHHHH
Confidence            4 3322          2348999999999999998754

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.96  E-value=5.8e-29  Score=201.56  Aligned_cols=167  Identities=22%  Similarity=0.244  Sum_probs=144.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++| +.+..++..+++...  +.++.++.+|++|+++++++++++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 666666666666554  5678899999999999999999999


Q ss_pred             hhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc-ccccCC
Q 027991          106 IQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR-LAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~  182 (216)
                      ++++++|++|||||...  +..+.+.++|++.+++|+.+++.+++.+++.|+ +      +|+||++||..+. .+.++ 
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~------~~~iv~~sS~~~~~~~~~~-  166 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R------GGRIILTSSIAAVMTGIPN-  166 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E------EEEEEEECCGGGTCCSCCS-
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h------CCEEEEEcChHhccCCCCC-
Confidence            99999999999999863  345678999999999999999999999999987 2      3899999998887 44332 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ...|+.||++++++++.++..
T Consensus       167 ---------~~~Y~~sK~a~~~~~~~~~~e  187 (274)
T 1ja9_A          167 ---------HALYAGSKAAVEGFCRAFAVD  187 (274)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHH
Confidence                     348999999999999987653

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.96  E-value=2.6e-29  Score=209.51  Aligned_cols=166  Identities=22%  Similarity=0.283  Sum_probs=140.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhh----cCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ++|++|||||++|||.+++++|+++|++|++++|+.+..+...+.+...    .++.++.++++|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            3789999999999999999999999999999988766655444443321    124578999999999999999999873


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                        ++++|+||||||+.  .+..+.+.++|++++++|+.+++.+++.++|.|+++     +.|+||++||..+..+.++. 
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----~~g~IV~isS~~~~~~~~~~-  152 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLMGLPFN-  152 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTSCCTTC-
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCcccccCCCCC-
Confidence              58999999999985  345577899999999999999999999999999876     57999999999988765443 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       153 ---------~~Y~aSK~a~~~~~~~la~e  172 (327)
T 1jtv_A          153 ---------DVYCASKFALEGLCESLAVL  172 (327)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHH
Confidence                     38999999999999998754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.96  E-value=1.8e-29  Score=226.26  Aligned_cols=172  Identities=26%  Similarity=0.283  Sum_probs=133.8

Q ss_pred             cccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc---------CCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           21 EEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVR---------DIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        21 ~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      .......+++||++|||||++|||+++|+.|+++|++|++++|         +.+.++...+++...  +..   ..+|+
T Consensus         9 ~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~~---~~~D~   83 (613)
T 3oml_A            9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GGE---AVADY   83 (613)
T ss_dssp             ------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TCC---EEECC
T ss_pred             cCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CCe---EEEEe
Confidence            3344556799999999999999999999999999999999988         667778888887665  222   24799


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEE
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIIN  169 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~  169 (216)
                      +|.++++++++++.+.++++|+||||||+..  +..+.+.++|++++++|+.++++++++++|+|+++     +.|+||+
T Consensus        84 ~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-----~~g~IV~  158 (613)
T 3oml_A           84 NSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-----NYGRIIM  158 (613)
T ss_dssp             CCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----TCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEE
Confidence            9999999999999999999999999999873  45688999999999999999999999999999986     6799999


Q ss_pred             EcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          170 VSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       170 isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +||.++..+.++..          .|+.||+++++|++.++..
T Consensus       159 isS~a~~~~~~~~~----------~Y~asKaal~~lt~~la~e  191 (613)
T 3oml_A          159 TSSNSGIYGNFGQV----------NYTAAKMGLIGLANTVAIE  191 (613)
T ss_dssp             ECCHHHHHCCTTCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ECCHHHcCCCCCCh----------HHHHHHHHHHHHHHHHHHH
Confidence            99999998765443          8999999999999998754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=2.7e-28  Score=194.68  Aligned_cols=176  Identities=25%  Similarity=0.279  Sum_probs=145.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      |++|++|||||++|||.+++++|+++|  ++|++++|+.++.+...+    . .+.++.++.+|++|+++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999  999999999877654422    1 256789999999999999999999999


Q ss_pred             hcC--CccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc------CCCCcEEEEEcCCcc
Q 027991          107 QHH--QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGH  175 (216)
Q Consensus       107 ~~~--~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~isS~~~  175 (216)
                      .++  ++|+||||||+..   +..+.+.+++++.+++|+.+++.+++.++|.|.++...      ....++||++||..+
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            988  9999999999864   44567899999999999999999999999999875111      112689999999988


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+.+..   .....+...|+.||++++++++.++..
T Consensus       156 ~~~~~~~---~~~~~~~~~Y~~sK~a~~~~~~~la~e  189 (250)
T 1yo6_A          156 SITDNTS---GSAQFPVLAYRMSKAAINMFGRTLAVD  189 (250)
T ss_dssp             CSTTCCS---TTSSSCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCccc---ccccCCccHHHHHHHHHHHHHHHHHHH
Confidence            7765322   112245568999999999999988754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.96  E-value=2.7e-29  Score=199.22  Aligned_cols=157  Identities=17%  Similarity=0.182  Sum_probs=135.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |++|||||++|||.+++++|+++|++|++++|+.+++++..+++     +.++.++.+|++++++++++++++.+.   .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            68999999999999999999999999999999987766655443     457889999999999999999877543   3


Q ss_pred             cEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |+||||||+.  .+..+.+.++|++.+++|+.+++.+++.++|.|.++      +++||++||..+..+.++.       
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~-------  140 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ------PVNVVMIMSTAAQQPKAQE-------  140 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCEEEEECCGGGTSCCTTC-------
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEEeecccCCCCCCC-------
Confidence            9999999986  345578999999999999999999999999999874      4599999999988875544       


Q ss_pred             CCCccchHHHHHHHHHHHHHHhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                         ..|+.||+++++|++.++..
T Consensus       141 ---~~Y~asKaa~~~~~~~la~e  160 (230)
T 3guy_A          141 ---STYCAVKWAVKGLIESVRLE  160 (230)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHH
Confidence               38999999999999998764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=1.4e-28  Score=196.39  Aligned_cols=161  Identities=23%  Similarity=0.307  Sum_probs=135.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+++++..+    +.+  ...++++|++|+++++++++    
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~~~--~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR----ECP--GIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HST--TCEEEECCTTCHHHHHHHHT----
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HcC--CCCEEEEeCCCHHHHHHHHH----
Confidence            46889999999999999999999999999999999998766554433    222  34567999999999988876    


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.++     + .|+||++||..+..+.++  
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~~--  145 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR-----GVPGAIVNVSSQCSQRAVTN--  145 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEEECCGGGTSCCTT--
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCcEEEEeCchhhccCCCC--
Confidence            5678999999999863  44567899999999999999999999999999876     4 689999999888775433  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||++++++++.++..
T Consensus       146 --------~~~Y~~sK~a~~~~~~~la~e  166 (244)
T 3d3w_A          146 --------HSVYCSTKGALDMLTKVMALE  166 (244)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CchHHHHHHHHHHHHHHHHHH
Confidence                    348999999999999988653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.96  E-value=4.8e-29  Score=199.18  Aligned_cols=156  Identities=11%  Similarity=0.030  Sum_probs=135.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ..++|++|||||++|||.+++++|+++|++|++++|+.++.+            ....++++|++|+++++++++++.+.
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999976532            23567889999999999999999999


Q ss_pred             c--CCccEEEECCccCC--CC-CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          108 H--HQLNILINNAGIMG--TP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       108 ~--~~id~li~~Ag~~~--~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +  +++|+||||||+..  +. .+.+.++|++.+++|+.+++.+++.++|.|++       +|+||++||..+..+.++.
T Consensus        72 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  144 (241)
T 1dhr_A           72 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDGTPGM  144 (241)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCTTB
T ss_pred             hCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCEEEEECCHHHccCCCCc
Confidence            8  79999999999863  33 56788999999999999999999999999963       5899999999888765443


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       145 ----------~~Y~asK~a~~~~~~~la~e  164 (241)
T 1dhr_A          145 ----------IGYGMAKGAVHQLCQSLAGK  164 (241)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHTST
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHH
Confidence                      48999999999999988754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.96  E-value=7.1e-29  Score=199.71  Aligned_cols=158  Identities=18%  Similarity=0.133  Sum_probs=134.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |++|||||++|||.+++++|+++|++|++++|+.++.+...+ +...  +.++..+     |+++++++++++.+.++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999888776655 5443  3333333     6677888999999999999


Q ss_pred             cEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          112 NILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       112 d~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      |+||||||+.   .+..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++.      
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~------  142 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFGPWKEL------  142 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTSCCTTC------
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCcccccCCCCc------
Confidence            9999999986   345577899999999999999999999999999876     57999999999988765443      


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ..|+.||+++++|++.++..
T Consensus       143 ----~~Y~~sK~a~~~~~~~la~e  162 (254)
T 1zmt_A          143 ----STYTSARAGACTLANALSKE  162 (254)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hHHHHHHHHHHHHHHHHHHH
Confidence                48999999999999988754

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.96  E-value=2.2e-28  Score=206.28  Aligned_cols=170  Identities=12%  Similarity=0.033  Sum_probs=140.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEEcCCcchH------------HHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGK------------DVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~-~g~~Vi~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      ...+|++|||||++|||+++++.|++ +|++|++++++.+..+            ...+++...  +.+...+.+|++|+
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSD  121 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCH
Confidence            45789999999999999999999999 9999999998765532            122233333  56788999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccC---------------CCC---------------------CCCChHHHHHHHHH
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFAT  138 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~---------------~~~---------------------~~~~~~~~~~~~~~  138 (216)
                      ++++++++++.+.+|++|+||||||..               .+.                     .+.++++|++++++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            999999999999999999999999974               233                     56799999999999


Q ss_pred             HHhHHH-HHHHHHHHH-HHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          139 NHLGHF-LLTNLLLDT-MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       139 N~~~~~-~l~~~~~~~-~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      |..+.+ .+++.+++. |.+      ++|+||++||..+..+.|.+        ....|++||+++.+|++.++...
T Consensus       202 n~~~~~~~~~~~~~~~~m~~------~gG~IVniSSi~~~~~~p~~--------~~~aY~AaKaal~~ltrsLA~El  264 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVLA------EGAQTTAFTYLGEKITHDIY--------WNGSIGAAKKDLDQKVLAIRESL  264 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCEE------EEEEEEEEECCCCGGGTTTT--------TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHhhhh------CCcEEEEEeCchhhCcCCCc--------cchHHHHHHHHHHHHHHHHHHHh
Confidence            999998 788887754 443      36899999999998875543        11389999999999999998654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=6.5e-29  Score=197.71  Aligned_cols=155  Identities=11%  Similarity=-0.014  Sum_probs=134.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |++|++|||||++|||.+++++|+++|++|++++|+.+..+            ....++.+|++|+++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999976532            235678899999999999999999988


Q ss_pred             --CCccEEEECCccCC--CC-CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          109 --HQLNILINNAGIMG--TP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       109 --~~id~li~~Ag~~~--~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                        +++|+||||||+..  +. .+.+.++|++.+++|+.+++.+++.++|.|.+       .|+||++||..+..+.++. 
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~-  140 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGPTPSM-  140 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCTTB-
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEECchhhccCCCCc-
Confidence              79999999999863  33 56678999999999999999999999999963       5799999999888764443 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       141 ---------~~Y~~sK~a~~~~~~~la~e  160 (236)
T 1ooe_A          141 ---------IGYGMAKAAVHHLTSSLAAK  160 (236)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHST
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHH
Confidence                     48999999999999998754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.96  E-value=4.4e-28  Score=195.92  Aligned_cols=179  Identities=21%  Similarity=0.246  Sum_probs=144.7

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcC---CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      .....+++|++|||||++|||.+++++|+++|   ++|++++|+.++.+.. +++...  +.++.++.+|++|+++++++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~   90 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKL   90 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHH
Confidence            34556788999999999999999999999999   9999999998776643 444444  45789999999999999999


Q ss_pred             HHHHHhhcC--CccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc------CCCCcEEEE
Q 027991          101 ASEYNIQHH--QLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIIN  169 (216)
Q Consensus       101 ~~~~~~~~~--~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~  169 (216)
                      ++++.+.++  ++|+||||||+..   +..+.+.+++++.+++|+.+++.+++.++|.|.++...      ....|+||+
T Consensus        91 ~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  170 (267)
T 1sny_A           91 VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  170 (267)
T ss_dssp             HHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEE
Confidence            999999888  8999999999864   34567899999999999999999999999999875211      111589999


Q ss_pred             EcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          170 VSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       170 isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +||..+..+.+.       ..+...|+.||+++++|++.++..
T Consensus       171 isS~~~~~~~~~-------~~~~~~Y~~sK~a~~~~~~~la~e  206 (267)
T 1sny_A          171 MSSILGSIQGNT-------DGGMYAYRTSKSALNAATKSLSVD  206 (267)
T ss_dssp             ECCGGGCSTTCC-------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecccccccCCC-------CCCchHHHHHHHHHHHHHHHHHHH
Confidence            999988776431       123458999999999999988654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.96  E-value=1.4e-28  Score=197.71  Aligned_cols=155  Identities=8%  Similarity=0.030  Sum_probs=133.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+.-+|++|||||++|||.+++++|+++|++|++++|+.++.+              -..+.+|++|.++++++++++.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHH
Confidence            3344799999999999999999999999999999999976532              13578999999999999999999


Q ss_pred             hcCCccEEEECCccCCC---CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMGT---PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|+||||||+..+   ..+.+.+++++.+++|+.+++.++++++|.|++       +|+||++||..+..+.++. 
T Consensus        84 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~-  155 (251)
T 3orf_A           84 KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-------GGLFVLTGASAALNRTSGM-  155 (251)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCTTB-
T ss_pred             HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------CCEEEEEechhhccCCCCC-
Confidence            99999999999998632   456788999999999999999999999999964       5899999999998775543 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       156 ---------~~Y~~sKaa~~~~~~~la~e  175 (251)
T 3orf_A          156 ---------IAYGATKAATHHIIKDLASE  175 (251)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHTST
T ss_pred             ---------chhHHHHHHHHHHHHHHHHH
Confidence                     38999999999999988754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=2.8e-28  Score=194.50  Aligned_cols=161  Identities=24%  Similarity=0.366  Sum_probs=135.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|++|||||++|||.+++++|+++|++|++++|+.++.++..+    +.+  ...++.+|++|+++++++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~~~--~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK----ECP--GIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HST--TCEEEECCTTCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcc--CCCcEEecCCCHHHHHHHHH----
Confidence            45789999999999999999999999999999999998766554433    222  34567999999999988876    


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  183 (216)
                      .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.++     + .|+||++||..+..+.++  
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~~--  145 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR-----GVPGSIVNVSSMVAHVTFPN--  145 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEEECCGGGTSCCTT--
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC-----CCCeEEEEEcchhhcCCCCC--
Confidence            5678999999999863  44567899999999999999999999999999876     4 689999999888776443  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||++++.+++.++..
T Consensus       146 --------~~~Y~~sK~a~~~~~~~~a~~  166 (244)
T 1cyd_A          146 --------LITYSSTKGAMTMLTKAMAME  166 (244)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------cchhHHHHHHHHHHHHHHHHH
Confidence                    348999999999999988653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.96  E-value=1.1e-28  Score=197.41  Aligned_cols=156  Identities=15%  Similarity=0.095  Sum_probs=132.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-E--cCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMG-V--RDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +|++|||||++|||.+++++|+++|++|+++ +  |+.+++++..+++    .+       .|+.|+++++++++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PG-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TT-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CC-------CcccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  8877666554443    12       2334777888999999999


Q ss_pred             cCCccEEEECCccC-----CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          108 HHQLNILINNAGIM-----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       108 ~~~id~li~~Ag~~-----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      ++++|+||||||+.     .+..+.+.++|++++++|+.+++.++++++|.|.++     +.|+||++||..+..+.++.
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~~  144 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-----GGASVIFITSSVGKKPLAYN  144 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSCCTTC
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECChhhCCCCCCc
Confidence            99999999999985     345578999999999999999999999999999876     57999999999988765543


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.||+++++|++.++..
T Consensus       145 ----------~~Y~asK~a~~~~~~~la~e  164 (244)
T 1zmo_A          145 ----------PLYGPARAATVALVESAAKT  164 (244)
T ss_dssp             ----------TTHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHH
Confidence                      38999999999999998754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.96  E-value=1.2e-28  Score=197.24  Aligned_cols=153  Identities=16%  Similarity=0.181  Sum_probs=132.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .++|++|||||++|||.+++++|++ .|++|++++|+.+..            ...+.++++|++|+++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHHH--
Confidence            3578999999999999999999999 788999999886521            2457899999999999999996554  


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++++++|+.+++.++++++|.|++       .|+||++||..+..+.++..  
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~--  138 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-------GASIVFNGSDQCFIAKPNSF--  138 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-------EEEEEEECCGGGTCCCTTBH--
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-------CcEEEEECCHHHccCCCCCc--
Confidence            779999999999863  5668899999999999999999999999999874       47999999999988755543  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              .|+.||+++++|++.++..
T Consensus       139 --------~Y~asKaa~~~~~~~la~e  157 (244)
T 4e4y_A          139 --------AYTLSKGAIAQMTKSLALD  157 (244)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHH
T ss_pred             --------hhHHHHHHHHHHHHHHHHH
Confidence                    8999999999999998753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.96  E-value=1.4e-28  Score=194.34  Aligned_cols=143  Identities=22%  Similarity=0.196  Sum_probs=125.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+                      +|++|+++++++++++  
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~--   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI--   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh--
Confidence            3578999999999999999999999999999999998853                      8999999999998765  


Q ss_pred             hcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                        +++|+||||||+.   .+..+.+.++|++.+++|+.+++.+++.++|.|++       +|+||++||..+..+.++. 
T Consensus        58 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~-  127 (223)
T 3uce_A           58 --GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-------GGSITLTSGMLSRKVVANT-  127 (223)
T ss_dssp             --CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-------EEEEEEECCGGGTSCCTTC-
T ss_pred             --CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-------CeEEEEecchhhccCCCCc-
Confidence              7999999999976   35567899999999999999999999999999964       5899999999988875543 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++++|++.++..
T Consensus       128 ---------~~Y~asK~a~~~~~~~la~e  147 (223)
T 3uce_A          128 ---------YVKAAINAAIEATTKVLAKE  147 (223)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHh
Confidence                     38999999999999998754

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.96  E-value=3.5e-28  Score=206.69  Aligned_cols=170  Identities=14%  Similarity=0.035  Sum_probs=139.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEEcCCcchHH------------HHHHHHhhcCCCeEEEEEccCCCHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKD------------VKETIVKEIPSAKVDAMELDLSSLA   95 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~-~g~~Vi~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~~~Dv~~~~   95 (216)
                      ..+|++|||||++|||+++++.|++ +|++|++++|+.+..+.            ..+++...  +.+...+.+|++|++
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDA  136 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHH
Confidence            3589999999999999999999999 99999999998765432            22344433  567889999999999


Q ss_pred             HHHHHHHHHHhhc-CCccEEEECCccC---------------CCC---------------------CCCChHHHHHHHHH
Q 027991           96 SVRNFASEYNIQH-HQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFAT  138 (216)
Q Consensus        96 ~~~~~~~~~~~~~-~~id~li~~Ag~~---------------~~~---------------------~~~~~~~~~~~~~~  138 (216)
                      +++++++++.+.+ |+||+||||||..               .+.                     .+.+.++|++++++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            9999999999999 9999999999872               233                     25789999999999


Q ss_pred             HHhHHH-HHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          139 NHLGHF-LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       139 N~~~~~-~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      |..+.+ .+++.+++.+..+     ++|+||++||..+..+.|.+        ....|++||+++.+|++.++...
T Consensus       217 n~~~~~~~~~~a~~~~~m~~-----~gG~IVniSSi~g~~~~p~~--------~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          217 MGGQDWELWIDALEGAGVLA-----DGARSVAFSYIGTEITWPIY--------WHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE-----EEEEEEEEEECCCGGGHHHH--------TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHHHhh-----CCCEEEEEeCchhhccCCCc--------cchHHHHHHHHHHHHHHHHHHHh
Confidence            999997 7888877653322     36899999999998875543        11389999999999999998654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.96  E-value=9.2e-29  Score=197.90  Aligned_cols=160  Identities=19%  Similarity=0.109  Sum_probs=119.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|++|||||++|||.+++++|++ |++|++++|+.+.+++..+       ..++.++.+|+++++. .+.+.+..+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~~   72 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLKN   72 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGTT
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHHh
Confidence            46799999999999999999999987 9999999998766554332       2358899999999877 5555566677


Q ss_pred             cCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|+++      +|+||++||..+..+.++.   
T Consensus        73 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~---  143 (245)
T 3e9n_A           73 LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA------SGCVIYINSGAGNGPHPGN---  143 (245)
T ss_dssp             CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEC----------C---
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEcCcccccCCCCc---
Confidence            899999999999863  45567899999999999999999999999999875      5899999999998875544   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                             ..|+.||+++++|++.++..
T Consensus       144 -------~~Y~asK~a~~~~~~~la~e  163 (245)
T 3e9n_A          144 -------TIYAASKHALRGLADAFRKE  163 (245)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -------hHHHHHHHHHHHHHHHHHHH
Confidence                   38999999999999998764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.96  E-value=8e-28  Score=194.47  Aligned_cols=175  Identities=26%  Similarity=0.277  Sum_probs=143.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .++|++|||||++|||.+++++|++ +|++|++++|+.++.++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999 9999999999988888777777654  457889999999999999999999999


Q ss_pred             cCCccEEEECCccCCCC-CCCC-hHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc-
Q 027991          108 HHQLNILINNAGIMGTP-FMLS-KDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR-  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~-~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-  184 (216)
                      ++++|+||||||..... .+.. .+++++++++|+.+++.+++.++|.|.+       .|+||++||..+..+.+...+ 
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHH
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-------CCEEEEECChhhhcccccCChh
Confidence            99999999999986432 2333 5889999999999999999999999864       479999999888754221000 


Q ss_pred             ------------------------------CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 ------------------------------FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ------------------------------~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                                    ......+...|+.||++++++++.++..
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~  210 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARK  210 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHH
Confidence                                          0001123468999999999999987653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.95  E-value=1.7e-27  Score=206.46  Aligned_cols=166  Identities=27%  Similarity=0.290  Sum_probs=141.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||++|||.+++++|+++|++|++++|+... ++. +++..+.   ...++++|++|.++++++++++.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l-~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDL-KRVADKV---GGTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHH-HHHHHHH---TCEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHH-HHHHHHc---CCeEEEEecCCHHHHHHHHHHHHH
Confidence            44689999999999999999999999999999999987432 222 2222222   246899999999999999999999


Q ss_pred             hcCC-ccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQ-LNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~-id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .+++ +|+||||||+..  +..+.+.++|++++++|+.+++++++.+.+.|.++     +.|+||++||.++..+.++..
T Consensus       284 ~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-----~~g~iV~iSS~a~~~g~~g~~  358 (454)
T 3u0b_A          284 HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-----EGGRVIGLSSMAGIAGNRGQT  358 (454)
T ss_dssp             HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-----TTCEEEEECCHHHHHCCTTCH
T ss_pred             HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCEEEEEeChHhCCCCCCCH
Confidence            9986 999999999973  45678999999999999999999999999998765     578999999999998866554


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                .|+.||+++.+|++.++..
T Consensus       359 ----------~YaasKaal~~l~~~la~e  377 (454)
T 3u0b_A          359 ----------NYATTKAGMIGLAEALAPV  377 (454)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH
Confidence                      8999999999999988754

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.95  E-value=6.3e-29  Score=207.29  Aligned_cols=167  Identities=16%  Similarity=0.200  Sum_probs=135.5

Q ss_pred             CCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCC---------cchHHHHHHHHhh-cCCCeEEEEEccCCCH--H
Q 027991           30 SGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDI---------AAGKDVKETIVKE-IPSAKVDAMELDLSSL--A   95 (216)
Q Consensus        30 ~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~--~   95 (216)
                      .+|++|||||++  |||+++|++|+++|++|++++++.         ++.+...+..... .....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            378999999986  999999999999999999887664         2222111111110 0123478899999988  7


Q ss_pred             ------------------HHHHHHHHHHhhcCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHH
Q 027991           96 ------------------SVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (216)
Q Consensus        96 ------------------~~~~~~~~~~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  153 (216)
                                        +++++++++.+.++++|+||||||+.    .+..+.+.++|++++++|+.+++.+++.++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999973    35567899999999999999999999999999


Q ss_pred             HHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          154 MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       154 ~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      |++       .|+||++||..+..+.++..         ..|+.||+++.+|++.++..
T Consensus       161 m~~-------~g~Iv~isS~~~~~~~~~~~---------~~Y~asKaal~~~~~~la~e  203 (329)
T 3lt0_A          161 MKP-------QSSIISLTYHASQKVVPGYG---------GGMSSAKAALESDTRVLAYH  203 (329)
T ss_dssp             EEE-------EEEEEEEECGGGTSCCTTCT---------TTHHHHHHHHHHHHHHHHHH
T ss_pred             Hhh-------CCeEEEEeCccccCCCCcch---------HHHHHHHHHHHHHHHHHHHH
Confidence            975       38999999999988755431         27999999999999988764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=3.3e-27  Score=189.51  Aligned_cols=157  Identities=21%  Similarity=0.199  Sum_probs=128.0

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .+...+++|++|||||++|||.+++++|+++|++|++++|+.+..    +++     + +..++ +|+  .+++++++++
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~-----~-~~~~~-~D~--~~~~~~~~~~   78 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS-----G-HRYVV-CDL--RKDLDLLFEK   78 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT-----C-SEEEE-CCT--TTCHHHHHHH
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh-----C-CeEEE-eeH--HHHHHHHHHH
Confidence            345668899999999999999999999999999999999986321    111     2 46667 999  4567777766


Q ss_pred             HHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.    ++|+||||||+..  +..+.+.++|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.++
T Consensus        79 ~~----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~  149 (249)
T 1o5i_A           79 VK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVISPIEN  149 (249)
T ss_dssp             SC----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT
T ss_pred             hc----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchHhcCCCCC
Confidence            53    7999999999863  34577899999999999999999999999999886     5789999999988876443


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ...|+.||+++++|++.++..
T Consensus       150 ----------~~~Y~~sK~a~~~~~~~la~e  170 (249)
T 1o5i_A          150 ----------LYTSNSARMALTGFLKTLSFE  170 (249)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHH
Confidence                      348999999999999988754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.95  E-value=1.4e-27  Score=198.00  Aligned_cols=171  Identities=18%  Similarity=0.116  Sum_probs=130.8

Q ss_pred             CCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEEcCCcc------h-HHHHHHHHhhcCCC---eEEEEEcc---
Q 027991           26 GIDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAA------G-KDVKETIVKEIPSA---KVDAMELD---   90 (216)
Q Consensus        26 ~~~~~~k~~lItG~--s~giG~~~a~~l~~~g~~Vi~~~r~~~~------~-~~~~~~~~~~~~~~---~~~~~~~D---   90 (216)
                      .+++++|++|||||  ++|||.++++.|+++|++|++++|+...      . +...+++.....+.   ...++.+|   
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            34588999999999  8999999999999999999999976310      0 00011111110011   12344444   


Q ss_pred             ---------CC--------CHHHHHHHHHHHHhhcCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHHH
Q 027991           91 ---------LS--------SLASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNL  149 (216)
Q Consensus        91 ---------v~--------~~~~~~~~~~~~~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~  149 (216)
                               ++        |+++++++++++.+.++++|+||||||+.    .+..+.+.++|++++++|+.+++.+++.
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                     33        25689999999999999999999999974    3456789999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       150 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++|.|.+       +|+||++||.++..+.++..         ..|+.||+++++|++.++..
T Consensus       164 ~~~~m~~-------~g~Iv~isS~~~~~~~~~~~---------~~Y~asKaal~~l~~~la~e  210 (315)
T 2o2s_A          164 FGPIMNE-------GGSAVTLSYLAAERVVPGYG---------GGMSSAKAALESDTRTLAWE  210 (315)
T ss_dssp             HSTTEEE-------EEEEEEEEEGGGTSCCTTCC---------TTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhc-------CCEEEEEecccccccCCCcc---------HHHHHHHHHHHHHHHHHHHH
Confidence            9999964       48999999998887654431         27999999999999998754

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.95  E-value=2.1e-27  Score=195.15  Aligned_cols=169  Identities=17%  Similarity=0.155  Sum_probs=129.8

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEEcCC-----------cchHHHHHHHHhhcCCCeEEEEEcc---
Q 027991           27 IDGSGLTAIVTGAT--SGIGTETARVLALRGVHVVMGVRDI-----------AAGKDVKETIVKEIPSAKVDAMELD---   90 (216)
Q Consensus        27 ~~~~~k~~lItG~s--~giG~~~a~~l~~~g~~Vi~~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~~~D---   90 (216)
                      +++++|++|||||+  +|||.+++++|+++|++|++++|+.           +++++. +++.............+|   
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence            45789999999999  9999999999999999999998753           111111 111100000112333443   


Q ss_pred             -----CC----C--------HHHHHHHHHHHHhhcCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHHH
Q 027991           91 -----LS----S--------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTNL  149 (216)
Q Consensus        91 -----v~----~--------~~~~~~~~~~~~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~  149 (216)
                           ++    |        +++++++++++.+.++++|+||||||+.    .+..+.+.++|++++++|+.+++.++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 33    2        5689999999999999999999999974    3456789999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       150 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++|.|++       +|+||++||..+..+.++.         ...|+.||+++++|++.++..
T Consensus       163 ~~~~m~~-------~g~iv~isS~~~~~~~~~~---------~~~Y~asKaa~~~~~~~la~e  209 (297)
T 1d7o_A          163 FLPIMNP-------GGASISLTYIASERIIPGY---------GGGMSSAKAALESDTRVLAFE  209 (297)
T ss_dssp             HGGGEEE-------EEEEEEEECGGGTSCCTTC---------TTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcc-------CceEEEEeccccccCCCCc---------chHHHHHHHHHHHHHHHHHHH
Confidence            9999963       4899999999888765443         137999999999999988754

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.95  E-value=2.1e-27  Score=197.10  Aligned_cols=170  Identities=19%  Similarity=0.178  Sum_probs=114.3

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEEcCC-----------cchH-----------HHHHHHHhhcCC-
Q 027991           27 IDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDI-----------AAGK-----------DVKETIVKEIPS-   81 (216)
Q Consensus        27 ~~~~~k~~lItG~--s~giG~~~a~~l~~~g~~Vi~~~r~~-----------~~~~-----------~~~~~~~~~~~~-   81 (216)
                      +++++|++|||||  ++|||.++++.|+++|++|++++|+.           ++++           ++.+++...... 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4578999999999  89999999999999999999998752           2221           112222211000 


Q ss_pred             CeEEEEEcc------------CCC--------HHHHHHHHHHHHhhcCCccEEEECCccC----CCCCCCChHHHHHHHH
Q 027991           82 AKVDAMELD------------LSS--------LASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFA  137 (216)
Q Consensus        82 ~~~~~~~~D------------v~~--------~~~~~~~~~~~~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~  137 (216)
                      ....++.+|            ++|        +++++++++++.+.++++|+||||||+.    .+..+.+.++|+++++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence            002334443            233        4578999999999999999999999974    3456789999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          138 TNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       138 ~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +|+.+++.+++.++|+|.+       +|+||++||..+..+.++..         ..|+.||+++.+|++.++..
T Consensus       165 vN~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~~~~~~~---------~~Y~asKaal~~l~~~la~e  223 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKE-------GGSALALSYIASEKVIPGYG---------GGMSSAKAALESDCRTLAFE  223 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEE-------EEEEEEEEECC---------------------------THHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHhc-------CceEEEEeccccccccCccc---------hhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999964       48999999999887655431         26899999999999888654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.94  E-value=3.1e-26  Score=195.74  Aligned_cols=171  Identities=13%  Similarity=0.011  Sum_probs=138.3

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCeEEEEEcCCcch-----------HHHHHHHHhhcCCCeEEEEEccCCCHH
Q 027991           29 GSGLTAIVTGATSGIGTE--TARVLALRGVHVVMGVRDIAAG-----------KDVKETIVKEIPSAKVDAMELDLSSLA   95 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~--~a~~l~~~g~~Vi~~~r~~~~~-----------~~~~~~~~~~~~~~~~~~~~~Dv~~~~   95 (216)
                      ..+|++|||||++|||++  +++.|+++|++|++++|+.+..           .+..++..... +.++..+++|+++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK-GLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc-CCcEEEEEeeCCCHH
Confidence            678999999999999999  9999999999999999976542           12223332333 567899999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCccC---------------CCC---------------------CCCChHHHHHHHHHH
Q 027991           96 SVRNFASEYNIQHHQLNILINNAGIM---------------GTP---------------------FMLSKDNIELQFATN  139 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag~~---------------~~~---------------------~~~~~~~~~~~~~~N  139 (216)
                      +++++++++.+.+|++|+||||||..               .+.                     .+.+.++|++.+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            99999999999999999999999974               122                     245899999999999


Q ss_pred             HhHHH-HHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          140 HLGHF-LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       140 ~~~~~-~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      ..+.+ .+++.+++.+...     ++|+||++||.++..+.|.+        ....|++||+++.+|++.++...
T Consensus       217 ~~~~~~~~~~~l~~~~~~~-----~gg~IV~iSSi~~~~~~p~~--------~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFS-----DKATTIAYSYIGSPRTYKIY--------REGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEE-----EEEEEEEEECCCCGGGTTTT--------TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhc-----CCcEEEEEeCchhcCCCCcc--------ccHHHHHHHHHHHHHHHHHHHHh
Confidence            99988 7777777654332     47899999999988875543        11389999999999999987653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.94  E-value=1.5e-26  Score=203.75  Aligned_cols=163  Identities=15%  Similarity=0.135  Sum_probs=139.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEE-EcC-------------CcchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVH-VVMG-VRD-------------IAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      -.++++|||||++|||.+++++|+++|++ |+++ +|+             .+.+++..+++...  +.++.++.||++|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTD  326 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTS
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCC
Confidence            46789999999999999999999999996 7787 888             35567777777765  6789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEE
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINV  170 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~i  170 (216)
                      .++++++++++. .+++||+||||||+.  .+..+.+.++++++|++|+.|++++.+.+.+.++++     + .++||++
T Consensus       327 ~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~-----~~~~~iV~~  400 (525)
T 3qp9_A          327 AEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAG-----GRPPVLVLF  400 (525)
T ss_dssp             HHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC---------CCCEEEEE
T ss_pred             HHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccC-----CCCCEEEEE
Confidence            999999999988 789999999999997  356688999999999999999999999999998764     3 6899999


Q ss_pred             cCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHH
Q 027991          171 SSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       171 sS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                      ||.++..+.++..          .|+.+|+++.+|++.+
T Consensus       401 SS~a~~~g~~g~~----------~YaaaKa~l~~lA~~~  429 (525)
T 3qp9_A          401 SSVAAIWGGAGQG----------AYAAGTAFLDALAGQH  429 (525)
T ss_dssp             EEGGGTTCCTTCH----------HHHHHHHHHHHHHTSC
T ss_pred             CCHHHcCCCCCCH----------HHHHHHHHHHHHHHHH
Confidence            9999999876654          8999999999987543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=4.1e-26  Score=181.44  Aligned_cols=157  Identities=22%  Similarity=0.198  Sum_probs=130.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||++|||.+++++|+++|++|++++|+.+ .             ..+.++++|++|+++++++++++ +.+++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999865 2             12478999999999999999999 88899


Q ss_pred             ccEEEECCccCC--CCCCC----ChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCcEEEEEcCCcccccccCCc
Q 027991          111 LNILINNAGIMG--TPFML----SKDNIELQFATNHLGHFLLTNLLLDTMKKTARK-SGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       111 id~li~~Ag~~~--~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +|++|||||...  +..+.    +.+++++.+++|+.+++.+++.+++.|.++... .+..|+||++||..+..+.++  
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  144 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG--  144 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT--
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC--
Confidence            999999999863  22333    345999999999999999999999999864110 112359999999988776443  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              ...|+.||++++++++.+...
T Consensus       145 --------~~~Y~~sK~a~~~~~~~l~~e  165 (242)
T 1uay_A          145 --------QAAYAASKGGVVALTLPAARE  165 (242)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CchhhHHHHHHHHHHHHHHHH
Confidence                    348999999999999988653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.93  E-value=2.2e-25  Score=215.01  Aligned_cols=169  Identities=18%  Similarity=0.123  Sum_probs=143.9

Q ss_pred             CCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSG-IGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~g-iG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      .++++||++|||||++| ||.++++.|+++|++|+++ +|+.++.++..+++..+++  +.++.++.+|++|.+++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            34688999999999998 9999999999999999998 5777777777777765543  457899999999999999999


Q ss_pred             HHHHhh-----cC-CccEEEECCccCC---CCCCCC--hHHHHHHHHHHHhHHHHHHHHH--HHHHHHhhccCCCCcEEE
Q 027991          102 SEYNIQ-----HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNLL--LDTMKKTARKSGGEGRII  168 (216)
Q Consensus       102 ~~~~~~-----~~-~id~li~~Ag~~~---~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~~~~~~~~g~iv  168 (216)
                      +++.+.     +| ++|+||||||+..   +..+.+  .++|+++|++|+.+++.+++.+  +|.|.++     ++|+||
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-----~~G~IV  824 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-----PAQVIL  824 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-----CEEEEE
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-----CCCEEE
Confidence            999988     66 9999999999863   445667  8999999999999999999988  6777654     468999


Q ss_pred             EEcCCcccccccCCccCCCCCCCCccchHHHHHHHHH-HHHHHh
Q 027991          169 NVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLL-LHLLFF  211 (216)
Q Consensus       169 ~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l-~~~~~~  211 (216)
                      ++||..+..+            ....|+.||+++.+| ++.++.
T Consensus       825 nISS~ag~~g------------g~~aYaASKAAL~~Lttr~lA~  856 (1887)
T 2uv8_A          825 PMSPNHGTFG------------GDGMYSESKLSLETLFNRWHSE  856 (1887)
T ss_dssp             EECSCTTCSS------------CBTTHHHHHHHGGGHHHHHHHS
T ss_pred             EEcChHhccC------------CCchHHHHHHHHHHHHHHHHHH
Confidence            9999988775            123799999999998 777664

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.93  E-value=7.1e-26  Score=213.01  Aligned_cols=169  Identities=18%  Similarity=0.108  Sum_probs=142.6

Q ss_pred             CCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSG-IGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~g-iG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      .+.+++|++|||||++| ||.++|+.|+++|++|+++ +|+.+++++..+++..+++  +.++.++++|++|++++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            34578999999999998 9999999999999999998 5777777777777655443  457899999999999999999


Q ss_pred             HHHHhh-----cC-CccEEEECCccCC---CCCCCC--hHHHHHHHHHHHhHHHHHHHHH--HHHHHHhhccCCCCcEEE
Q 027991          102 SEYNIQ-----HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNLL--LDTMKKTARKSGGEGRII  168 (216)
Q Consensus       102 ~~~~~~-----~~-~id~li~~Ag~~~---~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--~~~~~~~~~~~~~~g~iv  168 (216)
                      +++.+.     +| ++|+||||||+..   +..+.+  .++|+++|++|+.+++.+++.+  +|.|.++     +.|+||
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-----ggGrIV  625 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-----PAQVIL  625 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-----CEEECC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-----CCCEEE
Confidence            999988     77 9999999999863   445667  8999999999999999999998  7888764     468999


Q ss_pred             EEcCCcccccccCCccCCCCCCCCccchHHHHHHHHH-HHHHHh
Q 027991          169 NVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLL-LHLLFF  211 (216)
Q Consensus       169 ~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l-~~~~~~  211 (216)
                      ++||.++..+            ....|+.||+++.+| ++.++.
T Consensus       626 nISSiAG~~G------------g~saYaASKAAL~aLttrsLAe  657 (1688)
T 2pff_A          626 PMSPNHGTFG------------GDGMYSESKLSLETLFNRWHSE  657 (1688)
T ss_dssp             CCCSCTTTSS------------CBTTHHHHHHHHTHHHHHTTTS
T ss_pred             EEEChHhccC------------CchHHHHHHHHHHHHHHHHHHH
Confidence            9999988775            123899999999998 555443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.93  E-value=4.1e-25  Score=192.93  Aligned_cols=159  Identities=18%  Similarity=0.192  Sum_probs=137.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC---cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++|||||++|||.+++++|+++|+ +|++++|+.   +..++..+++...  +.++.++.||++|.++++++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999 899999974   3456666666654  67899999999999999999999877


Q ss_pred             hcCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      . +++|+||||||+.   .+..+.+.++++++|++|+.+++++.+.+.+.         ..++||++||.++..+.++..
T Consensus       317 ~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~---------~~~~iV~~SS~a~~~g~~g~~  386 (496)
T 3mje_A          317 D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL---------DLDAFVLFSSGAAVWGSGGQP  386 (496)
T ss_dssp             T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHTTCTTCH
T ss_pred             h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc---------CCCEEEEEeChHhcCCCCCcH
Confidence            7 7999999999986   35668899999999999999999999877554         357999999999999866654


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                                .|+.+|+++.+|++.+..
T Consensus       387 ----------~YaAaKa~ldala~~~~~  404 (496)
T 3mje_A          387 ----------GYAAANAYLDALAEHRRS  404 (496)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHh
Confidence                      899999999999987654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.93  E-value=6.8e-25  Score=211.29  Aligned_cols=167  Identities=17%  Similarity=0.151  Sum_probs=141.3

Q ss_pred             CCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEEE-cCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSG-IGTETARVLALRGVHVVMGV-RDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        27 ~~~~~k~~lItG~s~g-iG~~~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      +.++||++|||||++| ||.++|+.|+++|++|++++ |+.+.+++..+++..++.  +.++.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4688999999999999 99999999999999999996 556666666666655543  4678999999999999999999


Q ss_pred             HHHhh---cC-CccEEEECCccCC---CCCCCC--hHHHHHHHHHHHhHHHHHHHH--HHHHHHHhhccCCCCcEEEEEc
Q 027991          103 EYNIQ---HH-QLNILINNAGIMG---TPFMLS--KDNIELQFATNHLGHFLLTNL--LLDTMKKTARKSGGEGRIINVS  171 (216)
Q Consensus       103 ~~~~~---~~-~id~li~~Ag~~~---~~~~~~--~~~~~~~~~~N~~~~~~l~~~--~~~~~~~~~~~~~~~g~iv~is  171 (216)
                      ++.+.   +| +||+||||||+..   +..+.+  .++|+++|++|+.+++.+++.  +++.|.++     +.|+||++|
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-----~~G~IVnIS  802 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-----PAQVILPLS  802 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-----CEEECCEEC
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-----CCCEEEEEc
Confidence            99988   88 9999999999863   456777  799999999999999999987  67777654     468999999


Q ss_pred             CCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          172 SEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       172 S~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      |.++..+.            ...|+.||+++.+|++.+.
T Consensus       803 S~ag~~gg------------~~aYaASKAAL~aLt~~la  829 (1878)
T 2uv9_A          803 PNHGTFGN------------DGLYSESKLALETLFNRWY  829 (1878)
T ss_dssp             SCSSSSSC------------CSSHHHHHHHHTTHHHHHH
T ss_pred             chhhccCC------------chHHHHHHHHHHHHHHHHH
Confidence            99888761            2379999999999976543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.93  E-value=1e-25  Score=181.06  Aligned_cols=153  Identities=16%  Similarity=0.130  Sum_probs=120.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |++|||||++|||.+++++|+++|++|++++|+.++.+.              . +++|++|.++++++++++   .+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHh---CCCC
Confidence            689999999999999999999999999999999765431              1 668999999998887643   3799


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC-----
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD-----  186 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~-----  186 (216)
                      |+||||||+..+.     +.+++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+........     
T Consensus        64 d~lv~~Ag~~~~~-----~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           64 DGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             SEEEECCCCCTTC-----SSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CEEEECCCCCCCc-----ccHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEECChhhhccccccchhhhhhcc
Confidence            9999999986422     2389999999999999999999999875     568999999998874211100000     


Q ss_pred             -------------CCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          187 -------------KINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       187 -------------~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                   ....+...|+.||++++++++.++..
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  172 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAA  172 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHH
Confidence                         11123458999999999999887643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.92  E-value=5e-25  Score=170.90  Aligned_cols=138  Identities=12%  Similarity=0.188  Sum_probs=120.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++||||+||||.+++++|+ +|++|++++|+.+                   .+.+|++|+++++++++++    +++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            79999999999999999999 9999999999853                   3789999999999998875    6899


Q ss_pred             EEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCC
Q 027991          113 ILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  190 (216)
                      ++|||||...  +..+.+.+++.+.+++|+.+++.+++.+.+.|.+       +++||++||..+..+.++         
T Consensus        61 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~---------  124 (202)
T 3d7l_A           61 AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-------KGSFTLTTGIMMEDPIVQ---------  124 (202)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-------EEEEEEECCGGGTSCCTT---------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcCCCCc---------
Confidence            9999999753  4456788999999999999999999999999853       489999999887765433         


Q ss_pred             CCccchHHHHHHHHHHHHHHh
Q 027991          191 PSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~~  211 (216)
                       ...|+.||++.+.+++.++.
T Consensus       125 -~~~Y~~sK~~~~~~~~~~~~  144 (202)
T 3d7l_A          125 -GASAAMANGAVTAFAKSAAI  144 (202)
T ss_dssp             -CHHHHHHHHHHHHHHHHHTT
T ss_pred             -cHHHHHHHHHHHHHHHHHHH
Confidence             34899999999999998864

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=3.3e-24  Score=173.51  Aligned_cols=150  Identities=19%  Similarity=0.175  Sum_probs=123.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |++|++|||||+||||.+++++|+++|++|++++|+..+..           +.++.++.+|++|++++.++++      
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            34689999999999999999999999999999999976543           3568999999999999998886      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc--CCccCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH--EGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~~~  186 (216)
                       ++|+||||||..      ..+++++++++|+.+++.+++++.+.         +.++||++||..++...+  .....+
T Consensus        64 -~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iv~~SS~~~~g~~~~~~~~~e~  127 (267)
T 3rft_A           64 -GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARAH---------GQPRIVFASSNHTIGYYPQTERLGPD  127 (267)
T ss_dssp             -TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGTTSBTTSCBCTT
T ss_pred             -CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcchHHhCCCCCCCCCCCC
Confidence             689999999983      44568899999999999999999432         467999999987764332  233334


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .+..+...|+.||++.+.+++.+..
T Consensus       128 ~~~~~~~~Y~~sK~~~e~~~~~~a~  152 (267)
T 3rft_A          128 VPARPDGLYGVSKCFGENLARMYFD  152 (267)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH
Confidence            5566777999999999999987753

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=1e-24  Score=169.51  Aligned_cols=149  Identities=17%  Similarity=0.203  Sum_probs=121.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+++||||+||||.+++++|+++  +|++++|+.++.++..+++.    .   .++.+|++|++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~---~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A---RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C---EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C---cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            57999999999999999999998  99999998776655544431    2   7889999999999999887    6899


Q ss_pred             cEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          112 NILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      |++|||||...  +..+.+.+++++.+++|+.+++.+++.+    .++     +.++||++||..+..+.++        
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-----~~~~iv~~sS~~~~~~~~~--------  130 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-----KGARAVFFGAYPRYVQVPG--------  130 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-----EEEEEEEECCCHHHHSSTT--------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-----CCcEEEEEcChhhccCCCC--------
Confidence            99999999863  4456788999999999999999999988    222     4689999999988765433        


Q ss_pred             CCCccchHHHHHHHHHHHHHHhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                        ...|+.||++++++++.+...
T Consensus       131 --~~~Y~~sK~a~~~~~~~~~~~  151 (207)
T 2yut_A          131 --FAAYAAAKGALEAYLEAARKE  151 (207)
T ss_dssp             --BHHHHHHHHHHHHHHHHHHHH
T ss_pred             --cchHHHHHHHHHHHHHHHHHH
Confidence              448999999999999988643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.91  E-value=3.2e-24  Score=196.93  Aligned_cols=158  Identities=20%  Similarity=0.239  Sum_probs=139.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHH-HcCC-eEEEEEcC---CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLA-LRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~-~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .+|++|||||++|||.++|++|+ ++|+ +|++++|+   .+..++..+++...  +.++.+++||++|+++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999 7999 59999998   45567777777665  778999999999999999999999


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.+ +||+||||||+..  +..+++.++|++.+++|+.|++++.+.+.|.|           +||++||.++..|.++.
T Consensus       607 ~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----------~iV~~SS~ag~~g~~g~  674 (795)
T 3slk_A          607 PDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-----------ALVLFSSVSGVLGSGGQ  674 (795)
T ss_dssp             CTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-----------EEEEEEETHHHHTCSSC
T ss_pred             HHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-----------EEEEEccHHhcCCCCCC
Confidence            8776 9999999999973  55688999999999999999999999986554           69999999999987776


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .          .|+++|+++.+|.+.++.
T Consensus       675 ~----------~YaAaka~~~alA~~~~~  693 (795)
T 3slk_A          675 G----------NYAAANSFLDALAQQRQS  693 (795)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHH
T ss_pred             H----------HHHHHHHHHHHHHHHHHH
Confidence            5          899999998888877654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.91  E-value=1.4e-23  Score=183.27  Aligned_cols=161  Identities=20%  Similarity=0.162  Sum_probs=135.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCc---chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      -.++++|||||+||||.+++++|+++|++ |++++|+..   ..++..+++...  +.++.++.||++|.+++.++++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999994 999999875   345555666554  678999999999999999999998


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                       ..++++|++|||||+..  +..+.+.+++++++++|+.+++++.+.+.+.         +.++||++||.++..+.++.
T Consensus       302 -~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---------~~~~~V~~SS~a~~~g~~g~  371 (486)
T 2fr1_A          302 -GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL---------DLTAFVLFSSFASAFGAPGL  371 (486)
T ss_dssp             -CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHTCCTTC
T ss_pred             -HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC---------CCCEEEEEcChHhcCCCCCC
Confidence             56689999999999864  3457799999999999999999999876432         46799999999998886654


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .          .|+.+|+++.+|.+.+..
T Consensus       372 ~----------~Yaaaka~l~~la~~~~~  390 (486)
T 2fr1_A          372 G----------GYAPGNAYLDGLAQQRRS  390 (486)
T ss_dssp             T----------TTHHHHHHHHHHHHHHHH
T ss_pred             H----------HHHHHHHHHHHHHHHHHh
Confidence            3          789999999999876653

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.89  E-value=1.7e-22  Score=177.31  Aligned_cols=158  Identities=22%  Similarity=0.227  Sum_probs=131.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCc---chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      -.++++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++++++++ 
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc-
Confidence            3578999999999999999999999999 6999999864   345556666543  67899999999999999999886 


Q ss_pred             HhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                          +++|+||||||+..  +..+.+.++++.++++|+.+++++.+.+.+. .       +.++||++||.++..+.++.
T Consensus       334 ----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~-------~~~~~V~~SS~a~~~g~~g~  401 (511)
T 2z5l_A          334 ----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K-------GLDAFVLFSSVTGTWGNAGQ  401 (511)
T ss_dssp             ----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T-------TCCCEEEEEEGGGTTCCTTB
T ss_pred             ----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c-------CCCEEEEEeCHHhcCCCCCC
Confidence                68999999999874  3456789999999999999999998876432 1       35799999999998876554


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                                ..|+.+|+++++|++.++.
T Consensus       402 ----------~~YaaaKa~ld~la~~~~~  420 (511)
T 2z5l_A          402 ----------GAYAAANAALDALAERRRA  420 (511)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHT
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH
Confidence                      3899999999999987653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.89  E-value=4.5e-23  Score=164.81  Aligned_cols=152  Identities=19%  Similarity=0.128  Sum_probs=120.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |++|||||+||||.+++++|+++|++|++++|+.++.+.               .+.+|++++++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHc---CCCc
Confidence            689999999999999999999999999999998765321               1568999999999888755   3689


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC-----
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD-----  186 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~-----  186 (216)
                      |+||||||...+     .+.+++.+++|+.+++.+++++++.|.++     +.++||++||..+..+.+......     
T Consensus        64 d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  133 (255)
T 2dkn_A           64 DGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRG-----QQPAAVIVGSIAATQPGAAELPMVEAMLA  133 (255)
T ss_dssp             SEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred             cEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhc-----CCceEEEEeccccccccccccchhhhhcc
Confidence            999999998542     23488999999999999999999999874     468999999988876532111000     


Q ss_pred             -----------CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 -----------KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 -----------~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                                 ....+...|+.||++.+.+++.+..
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~  169 (255)
T 2dkn_A          134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVV  169 (255)
T ss_dssp             TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHH
T ss_pred             cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHH
Confidence                       0012445899999999999988753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.89  E-value=9.7e-23  Score=204.22  Aligned_cols=163  Identities=15%  Similarity=0.081  Sum_probs=129.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCcchH---HHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGK---DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      -.+|++|||||++|||+++|++|+++|++ |++++|+..+.+   +..+++...  +.++.+++||++|.++++++++++
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHH
Confidence            36899999999999999999999999996 888899876553   334444433  668999999999999999999998


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      . .+++||+||||||+.  .+..+++.++|++++++|+.|++++.+.+.+.|.+       .|+||++||.++..|.++.
T Consensus      1960 ~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-------~g~iV~iSS~ag~~g~~g~ 2031 (2512)
T 2vz8_A         1960 T-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-------LDYFVIFSSVSCGRGNAGQ 2031 (2512)
T ss_dssp             H-HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT-------CCEEEEECCHHHHTTCTTC
T ss_pred             H-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-------CCEEEEecchhhcCCCCCc
Confidence            6 479999999999986  35668899999999999999999999999999864       4799999999999886655


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .          .|+++|+++.+|++.++.
T Consensus      2032 ~----------~Y~aaKaal~~l~~~rr~ 2050 (2512)
T 2vz8_A         2032 A----------NYGFANSAMERICEKRRH 2050 (2512)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHH
T ss_pred             H----------HHHHHHHHHHHHHHHHHH
Confidence            4          899999999999996654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.88  E-value=3.6e-22  Score=200.45  Aligned_cols=171  Identities=12%  Similarity=0.064  Sum_probs=129.4

Q ss_pred             CCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEEEcCCcc-----hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSG-IGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        27 ~~~~~k~~lItG~s~g-iG~~~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      ..++||++|||||++| ||.++|+.|+++|++|++++|+.+.     ++++.+++...  +.++..+++|++|+++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHH
Confidence            3489999999999999 9999999999999999999998766     44444444322  45788999999999999999


Q ss_pred             HHHHHh----hcCCccEEEECCccC-------CCCCCCChHHHH----HHHHHHHhHHHHHHHHHHHHHHHhhccCCCCc
Q 027991          101 ASEYNI----QHHQLNILINNAGIM-------GTPFMLSKDNIE----LQFATNHLGHFLLTNLLLDTMKKTARKSGGEG  165 (216)
Q Consensus       101 ~~~~~~----~~~~id~li~~Ag~~-------~~~~~~~~~~~~----~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g  165 (216)
                      ++++.+    .+|++|+||||||+.       .+..+.+.++|+    ..+++|+.+++.+++.+.+.|.++.. ....+
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~-g~~~~ 2288 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDI-ASRLH 2288 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-CCCEE
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CceeE
Confidence            999998    899999999999982       122333444444    44999999999999999999987511 00112


Q ss_pred             EEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          166 RIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       166 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .|++.|+..+..+            ....|+.||+++.+|++.++..
T Consensus      2289 ii~~~ss~~g~~g------------~~~aYsASKaAl~~LtrslA~E 2323 (3089)
T 3zen_D         2289 VVLPGSPNRGMFG------------GDGAYGEAKSALDALENRWSAE 2323 (3089)
T ss_dssp             EEEEECSSTTSCS------------SCSSHHHHGGGHHHHHHHHHHC
T ss_pred             EEEECCcccccCC------------CchHHHHHHHHHHHHHHHHHhc
Confidence            2333343333221            1237999999999999998765

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=1.8e-21  Score=161.96  Aligned_cols=164  Identities=19%  Similarity=0.123  Sum_probs=127.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .++++|||||+|+||.+++++|+++|++|++++|+.+...+..+.+.... +.++.++.+|++|++++++++++     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----c
Confidence            46799999999999999999999999999999998877776666665543 45688999999999999999876     4


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--ccCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--IRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~~~~  187 (216)
                      ++|++||+||....  ....+...+.+++|+.++..+++++.    +.     +.++||++||.+.+ +.+..  ...+.
T Consensus        78 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~-----~~~~iv~~SS~~~~-g~~~~~~~~e~~  145 (341)
T 3enk_A           78 PITAAIHFAALKAV--GESVAKPIEYYRNNLDSLLSLLRVMR----ER-----AVKRIVFSSSATVY-GVPERSPIDETF  145 (341)
T ss_dssp             CCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHH----HT-----TCCEEEEEEEGGGB-CSCSSSSBCTTS
T ss_pred             CCcEEEECcccccc--CccccChHHHHHHHHHHHHHHHHHHH----hC-----CCCEEEEEecceEe-cCCCCCCCCCCC
Confidence            79999999998532  11334456789999999998877653    32     45799999996554 33322  22334


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +..+...|+.||++.+.+++.+..
T Consensus       146 ~~~~~~~Y~~sK~~~e~~~~~~~~  169 (341)
T 3enk_A          146 PLSATNPYGQTKLMAEQILRDVEA  169 (341)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHhh
Confidence            555677999999999999987653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.88  E-value=1.7e-21  Score=161.96  Aligned_cols=166  Identities=16%  Similarity=0.061  Sum_probs=124.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |++|++|||||+|+||.+++++|+++|++|++++|+.+..+.  +.+.......++.++.+|++|++++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            457899999999999999999999999999999998765432  12222212346889999999999999998876    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDK  187 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~  187 (216)
                       ++|++||+||...  .+.+.+++.+.+++|+.++.++++++.+. .       .+++||++||.+.+-.... ......
T Consensus        75 -~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~-------~~~~iv~~SS~~vyg~~~~~~~~e~~  143 (345)
T 2z1m_A           75 -QPDEVYNLAAQSF--VGVSFEQPILTAEVDAIGVLRILEALRTV-K-------PDTKFYQASTSEMFGKVQEIPQTEKT  143 (345)
T ss_dssp             -CCSEEEECCCCCC--HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-C-------TTCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             -CCCEEEECCCCcc--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-C-------CCceEEEEechhhcCCCCCCCCCccC
Confidence             6899999999753  12234568889999999999999999853 1       1379999999754322211 112234


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +..+...|+.||++.+.+++.+..
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~  167 (345)
T 2z1m_A          144 PFYPRSPYAVAKLFGHWITVNYRE  167 (345)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHH
Confidence            455677899999999999887753

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.87  E-value=9.6e-22  Score=155.94  Aligned_cols=145  Identities=17%  Similarity=0.160  Sum_probs=109.8

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeE-EEEEccCCCHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV-DAMELDLSSLASVRNFAS  102 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~~~~~~~  102 (216)
                      .....+++|++|||||+|+||.+++++|+++|++|++++|+.++.+...+        ..+ .++.+|++         +
T Consensus        14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~---------~   76 (236)
T 3e8x_A           14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE---------E   76 (236)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT---------S
T ss_pred             ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH---------H
Confidence            34566889999999999999999999999999999999999877554321        246 88999999         2


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+.+.++++|+||||||...      .+++++.+++|+.++..+++++.+.         +.++||++||..+..+... 
T Consensus        77 ~~~~~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~~-  140 (236)
T 3e8x_A           77 DFSHAFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR---------GIKRFIMVSSVGTVDPDQG-  140 (236)
T ss_dssp             CCGGGGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH---------TCCEEEEECCTTCSCGGGS-
T ss_pred             HHHHHHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc---------CCCEEEEEecCCCCCCCCC-
Confidence            34445568999999999753      2468889999999999999988443         4579999999665543211 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHH
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLH  207 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~  207 (216)
                           . .+...|+.+|++.+.+++
T Consensus       141 -----~-~~~~~Y~~sK~~~e~~~~  159 (236)
T 3e8x_A          141 -----P-MNMRHYLVAKRLADDELK  159 (236)
T ss_dssp             -----C-GGGHHHHHHHHHHHHHHH
T ss_pred             -----h-hhhhhHHHHHHHHHHHHH
Confidence                 0 345689999999998875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.87  E-value=4.4e-21  Score=159.39  Aligned_cols=161  Identities=15%  Similarity=0.131  Sum_probs=121.0

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .....++++++|||||+|+||.+++++|+++|++|++++|+.....+..+    ..  .++.++.+|++|.+++.+++++
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~l--~~v~~~~~Dl~d~~~~~~~~~~   86 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP----PV--AGLSVIEGSVTDAGLLERAFDS   86 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC----SC--TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh----cc--CCceEEEeeCCCHHHHHHHHhh
Confidence            34456788999999999999999999999999999999997654321111    11  3578899999999999999886


Q ss_pred             HHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-
Q 027991          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-  182 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  182 (216)
                      +     ++|+|||+||.....   +.+++.  +++|+.++..+++++.+.         +.++||++||.+.+.+.... 
T Consensus        87 ~-----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~~~~~~~~  147 (330)
T 2pzm_A           87 F-----KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA---------GVKRLLNFQTALCYGRPATVP  147 (330)
T ss_dssp             H-----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH---------TCSEEEEEEEGGGGCSCSSSS
T ss_pred             c-----CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc---------CCCEEEEecCHHHhCCCccCC
Confidence            5     799999999986432   445555  999999999999998742         35799999998664332110 


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHH
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                      .+++....+...|+.||++.+.+++.+
T Consensus       148 ~~~~E~~~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A          148 IPIDSPTAPFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             BCTTCCCCCCSHHHHHHHHHHHHHHTC
T ss_pred             CCcCCCCCCCChHHHHHHHHHHHHHHc
Confidence            011111146679999999999988754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.87  E-value=6.4e-21  Score=158.80  Aligned_cols=167  Identities=18%  Similarity=0.106  Sum_probs=129.1

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcC-------CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHH
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRG-------VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS   96 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   96 (216)
                      .....++++++|||||+|+||.+++++|+++|       ++|++++|+.+....        ....++.++.+|++|+++
T Consensus         7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~   78 (342)
T 2hrz_A            7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGE   78 (342)
T ss_dssp             CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTH
T ss_pred             CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHH
Confidence            34456788999999999999999999999999       899999998654321        114578899999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991           97 VRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus        97 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      +.++++      +++|++||+||...   ..+.+++.+.+++|+.++.++++++.+...++    +..++||++||.+.+
T Consensus        79 ~~~~~~------~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~----~~~~~iv~~SS~~~~  145 (342)
T 2hrz_A           79 AEKLVE------ARPDVIFHLAAIVS---GEAELDFDKGYRINLDGTRYLFDAIRIANGKD----GYKPRVVFTSSIAVF  145 (342)
T ss_dssp             HHHHHH------TCCSEEEECCCCCH---HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGC
T ss_pred             HHHHHh------cCCCEEEECCccCc---ccccccHHHHHHHHHHHHHHHHHHHHhccccc----CCCcEEEEeCchHhh
Confidence            888775      37999999999753   12456788999999999999999988764321    014699999998654


Q ss_pred             ccc-cCCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          177 LAY-HEGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       177 ~~~-~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .+. +.....+.+..+...|+.||++.+.+++.+..
T Consensus       146 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  181 (342)
T 2hrz_A          146 GAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSR  181 (342)
T ss_dssp             CSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            432 22333445555777999999999999887753

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.86  E-value=6.1e-21  Score=159.91  Aligned_cols=164  Identities=18%  Similarity=0.077  Sum_probs=127.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++++++|||||+|+||.+++++|+++|++|++++|+.+..+...+.+.   ...++.++.+|++|++++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc----
Confidence            567899999999999999999999999999999998766554443332   1346789999999999999998865    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~  186 (216)
                       ++|+|||+||..  ..+.+.+++.+.+++|+.++..+++++.+. .       ..++||++||...+.+...  ....+
T Consensus        80 -~~d~vih~A~~~--~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-------~~~~~v~~SS~~vyg~~~~~~~~~E~  148 (357)
T 1rkx_A           80 -QPEIVFHMAAQP--LVRLSYSEPVETYSTNVMGTVYLLEAIRHV-G-------GVKAVVNITSDKCYDNKEWIWGYREN  148 (357)
T ss_dssp             -CCSEEEECCSCC--CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-C-------CCCEEEEECCGGGBCCCCSSSCBCTT
T ss_pred             -CCCEEEECCCCc--ccccchhCHHHHHHHHHHHHHHHHHHHHHh-C-------CCCeEEEecCHHHhCCCCcCCCCCCC
Confidence             689999999963  222345677889999999999999999764 1       2569999999765433221  12222


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHH
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+..+...|+.||++.+.+++.+.
T Consensus       149 ~~~~~~~~Y~~sK~~~e~~~~~~~  172 (357)
T 1rkx_A          149 EAMGGYDPYSNSKGCAELVTSSYR  172 (357)
T ss_dssp             SCBCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHH
Confidence            345567799999999999988775

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.86  E-value=1e-20  Score=158.94  Aligned_cols=164  Identities=17%  Similarity=0.126  Sum_probs=121.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHH--cCCeEEEEEcCCcchHHHH------HHHHhhcCCCeEEEEEccCCCHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLAL--RGVHVVMGVRDIAAGKDVK------ETIVKEIPSAKVDAMELDLSSLASVR   98 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~--~g~~Vi~~~r~~~~~~~~~------~~~~~~~~~~~~~~~~~Dv~~~~~~~   98 (216)
                      .+++++++|||||+|+||.+++++|++  +|++|++++|+........      ... ....+.++.++.+|++|+++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHF-KNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCG-GGGTTCCSEEEECCTTCHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhh-hhccccCceEEECCCCCHHHHH
Confidence            467889999999999999999999999  9999999999764110000      000 0112446789999999999988


Q ss_pred             HHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991           99 NFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus        99 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++      ...++|+|||+||....    +.+++...+++|+.++.++++++.+.          +++||++||.+.+-.
T Consensus        85 ~~------~~~~~D~vih~A~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~~----------~~~~V~~SS~~vyg~  144 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSDT----TMLNQELVMKTNYQAFLNLLEIARSK----------KAKVIYASSAGVYGN  144 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCGG----GCCCHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEEEEGGGGCS
T ss_pred             Hh------hccCCCEEEECCccCCc----cccCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEeCcHHHhCC
Confidence            76      23589999999996432    45677899999999999999988322          446999999544332


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .......+....+...|+.||++.+.+++.+..
T Consensus       145 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  177 (362)
T 3sxp_A          145 TKAPNVVGKNESPENVYGFSKLCMDEFVLSHSN  177 (362)
T ss_dssp             CCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTT
T ss_pred             CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhc
Confidence            233333455667778999999999999887653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.86  E-value=1.8e-20  Score=157.61  Aligned_cols=168  Identities=16%  Similarity=0.077  Sum_probs=120.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH-HHHHHHHhhc--CCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-DVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +|++|||||+|+||.+++++|+++|++|++++|+.+... +..+.+....  .+.++.++.+|++|.+++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            378999999999999999999999999999999865321 1112221110  1346888999999999999998875   


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFD  186 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~  186 (216)
                        ++|++||+||....  ..+.+++...+++|+.++..+++++.+.+.+      ++++||++||.+.+.+... ....+
T Consensus        78 --~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~iv~~SS~~v~g~~~~~~~~E~  147 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELYGLVQEIPQKET  147 (372)
T ss_dssp             --CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             --CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEeCChhhhCCCCCCCCCcc
Confidence              68999999998542  2355667889999999999999999776432      2479999999765433221 22234


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .+..+...|+.||++.+.+++.+..
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~  172 (372)
T 1db3_A          148 TPFYPRSPYAVAKLYAYWITVNYRE  172 (372)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH
Confidence            4455677999999999999887753

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.85  E-value=2.3e-20  Score=157.73  Aligned_cols=166  Identities=13%  Similarity=0.021  Sum_probs=125.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-----hHHHHHHHHhhcCCC-eEEEEEccCCCHHHHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      |++|||||+|+||.++++.|+++|++|++++|+.+.     ++...+.....  +. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998654     22221111111  22 6889999999999999998876 


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                          ++|+|||+||....  ..+.+++...+++|+.++..+++++.+.+.++    +++++||++||.+.+.+.......
T Consensus       106 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~E  175 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDS----GRTVKYYQAGSSEMFGSTPPPQSE  175 (381)
T ss_dssp             ----CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             ----CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCcc----CCccEEEEeCcHHHhCCCCCCCCC
Confidence                68999999997532  12356788899999999999999999987653    134699999997654332222223


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHH
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +.+..+...|+.+|++.+.+++.+.
T Consensus       176 ~~~~~~~~~Y~~sK~~~E~~~~~~~  200 (381)
T 1n7h_A          176 TTPFHPRSPYAASKCAAHWYTVNYR  200 (381)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHH
Confidence            3455667799999999999988765

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.85  E-value=4.2e-20  Score=154.58  Aligned_cols=165  Identities=14%  Similarity=0.074  Sum_probs=125.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC---CCeEEEEEccCCCHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .++++++|||||+|+||.+++++|+++|++|++++|+.....+..+.+.....   ..++.++.+|++|.+++.++++  
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence            35678999999999999999999999999999999976533333333332221   2468899999999998888775  


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-Cc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GI  183 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~  183 (216)
                           ++|++||+||.....  .+.+++.+.+++|+.++..+++++.+.         +.++||++||.+.+.+.+. ..
T Consensus       102 -----~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~~~~  165 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA---------KVQSFTYAASSSTYGDHPGLPK  165 (352)
T ss_dssp             -----TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGTTCCCSSB
T ss_pred             -----CCCEEEECCcccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHhcCCCCCCCC
Confidence                 689999999975321  144678889999999999999988653         3569999999876544332 22


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..+.+..+...|+.+|++.+.+++.+.
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~  192 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFS  192 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            234445567799999999999988764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.84  E-value=7.5e-20  Score=152.28  Aligned_cols=161  Identities=14%  Similarity=0.073  Sum_probs=122.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +++|||||+|+||.+++++|+++|++|++++|+. .......+.+..   ..++.++.+|++|+++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5799999999999999999999999999999864 222333334432   235888999999999999988762     6


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--------
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--------  182 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  182 (216)
                      +|+|||+||....  +.+.+++.+.+++|+.++.++++++.+.+.        +++||++||.+.+.+....        
T Consensus        74 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--------~~~iv~~SS~~v~g~~~~~~~~e~~~~  143 (347)
T 1orr_A           74 PDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS--------NCNIIYSSTNKVYGDLEQYKYNETETR  143 (347)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             CCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--------CceEEEeccHHHhCCCCcCCccccccc
Confidence            8999999997431  223557788999999999999999988753        3589999997654322111        


Q ss_pred             ---------ccCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          183 ---------IRFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       183 ---------~~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                               .....+..+...|+.||++.+.+++.+.
T Consensus       144 ~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~  180 (347)
T 1orr_A          144 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA  180 (347)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence                     1122344567789999999999998764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.84  E-value=2.3e-20  Score=154.07  Aligned_cols=155  Identities=19%  Similarity=0.180  Sum_probs=120.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+.+++|||||+|+||.+++++|+++|++|++++|+.+. +.    +       ++.++.+|++|++++.++++.     
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh-----
Confidence            356789999999999999999999999999999998654 21    1       478899999999999998876     


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc---cCCccC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY---HEGIRF  185 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~~  185 (216)
                      +++|++||+||...+  +.+.+++.+.+++|+.++..+++++ +.+.       +.++||++||.+.+.+.   ......
T Consensus        73 ~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-------~~~~iv~~SS~~v~g~~~~~~~~~~E  142 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN-------LDCRILTIGSSEEYGMILPEESPVSE  142 (321)
T ss_dssp             HCCSEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT-------CCCEEEEEEEGGGTBSCCGGGCSBCT
T ss_pred             cCCCEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC-------CCCeEEEEccHHhcCCCCCCCCCCCC
Confidence            368999999997532  1234467889999999999999999 5542       35799999998654332   122223


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHH
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +.+..+...|+.||++.+.+++.+.
T Consensus       143 ~~~~~~~~~Y~~sK~~~E~~~~~~~  167 (321)
T 2pk3_A          143 ENQLRPMSPYGVSKASVGMLARQYV  167 (321)
T ss_dssp             TSCCBCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHH
Confidence            3445567799999999999988775

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.84  E-value=1e-19  Score=154.38  Aligned_cols=165  Identities=15%  Similarity=0.130  Sum_probs=121.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH-HcCCeEEEEEcCCcc---------hHHHHHHHHhhcC---CCe---EEEEEccCCCH
Q 027991           31 GLTAIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAA---------GKDVKETIVKEIP---SAK---VDAMELDLSSL   94 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~-~~g~~Vi~~~r~~~~---------~~~~~~~~~~~~~---~~~---~~~~~~Dv~~~   94 (216)
                      ++++|||||+|+||.+++++|+ ++|++|++++|+...         .+...+.+.....   ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3579999999999999999999 999999999987654         2333222222211   123   88999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      +.+.+++++    ++++|+|||+||.....  .+.+++.+.+++|+.++.++++++.+.         +.++||++||.+
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~iv~~SS~~  146 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLLH---------KCDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC--cchhhHHHHHHHHhHHHHHHHHHHHHh---------CCCEEEEECCHH
Confidence            998888764    45699999999975321  144667889999999999999986432         356999999954


Q ss_pred             ccccccC---------CccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          175 HRLAYHE---------GIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       175 ~~~~~~~---------~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      . ++.+.         ....+.+..+...|+.||++.+.+++.+..
T Consensus       147 v-~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~  191 (397)
T 1gy8_A          147 I-FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAE  191 (397)
T ss_dssp             G-TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHH
T ss_pred             H-hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHH
Confidence            4 33322         222334445677999999999999988753

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.84  E-value=1.6e-20  Score=155.96  Aligned_cols=163  Identities=12%  Similarity=0.039  Sum_probs=122.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEE-EccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM-ELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++++|||||+|+||.+++++|+++|++|++++|+.++.+...+.+.... +.++.++ .+|++|.++++++++    
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc----
Confidence            4678999999999999999999999999999999998776655555444333 2467788 899999888776654    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc-ccCC--c
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA-YHEG--I  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~~~~--~  183 (216)
                         ++|++||+||.....     +++.+.+++|+.++.++++++.+.   .     +.++||++||.+++.. .+..  .
T Consensus        83 ---~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~---~-----~~~~iv~~SS~~~~~~~~~~~~~~  146 (342)
T 1y1p_A           83 ---GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT---P-----SVKRFVLTSSTVSALIPKPNVEGI  146 (342)
T ss_dssp             ---TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC---T-----TCCEEEEECCGGGTCCCCTTCCCC
T ss_pred             ---CCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC---C-----CCcEEEEeccHHHhcCCCCCCCCc
Confidence               689999999986432     346789999999999999988752   1     3579999999877632 2110  1


Q ss_pred             cC--CC----------------CCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RF--DK----------------INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~--~~----------------~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ++  +.                ...+...|+.||++.+.+++.+..
T Consensus       147 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  192 (342)
T 1y1p_A          147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMD  192 (342)
T ss_dssp             EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence            11  11                123445899999999999988754

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.84  E-value=2.5e-20  Score=156.05  Aligned_cols=149  Identities=17%  Similarity=0.156  Sum_probs=120.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-CC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALR-GV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~-g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++|++|||||+|+||.+++++|+++ |+ +|++++|+..+.+...+++    +..++.++.+|++|.+.+.++++   
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~----~~~~v~~~~~Dl~d~~~l~~~~~---   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF----NDPRMRFFIGDVRDLERLNYALE---   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHH----CCTTEEEEECCTTCHHHHHHHTT---
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHh----cCCCEEEEECCCCCHHHHHHHHh---
Confidence            467899999999999999999999999 97 9999999876655444333    24578999999999998887764   


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                          ++|+|||+||.....  ....+..+.+++|+.++.++++++.+.         +.++||++||..+..        
T Consensus        91 ----~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~l~~aa~~~---------~v~~~V~~SS~~~~~--------  147 (344)
T 2gn4_A           91 ----GVDICIHAAALKHVP--IAEYNPLECIKTNIMGASNVINACLKN---------AISQVIALSTDKAAN--------  147 (344)
T ss_dssp             ----TCSEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEECCGGGSS--------
T ss_pred             ----cCCEEEECCCCCCCC--chhcCHHHHHHHHHHHHHHHHHHHHhC---------CCCEEEEecCCccCC--------
Confidence                689999999985321  123456789999999999999999875         356999999965432        


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                           +...|+.||++.+.+++.+..
T Consensus       148 -----p~~~Y~~sK~~~E~~~~~~~~  168 (344)
T 2gn4_A          148 -----PINLYGATKLCSDKLFVSANN  168 (344)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHGGG
T ss_pred             -----CccHHHHHHHHHHHHHHHHHH
Confidence                 345899999999999887653

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.84  E-value=1.5e-20  Score=157.14  Aligned_cols=168  Identities=12%  Similarity=0.028  Sum_probs=130.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCC---CeEEEEEccCCCHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---AKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      ...+.++++|||||+|+||.+++++|+++|++|++++|+........+.+....+.   .++.++.+|++|.+++.++++
T Consensus        20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             hCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence            34467899999999999999999999999999999999877666555555543211   578999999999998888775


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-  181 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  181 (216)
                             ++|++||+||....  ..+.+++...+++|+.++..+++++.+.         +.+++|++||.+.+...+. 
T Consensus       100 -------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vyg~~~~~  161 (351)
T 3ruf_A          100 -------GVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA---------QVQSFTYAASSSTYGDHPAL  161 (351)
T ss_dssp             -------TCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGTTCCCS
T ss_pred             -------CCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEecHHhcCCCCCC
Confidence                   68999999997432  2245667789999999999999988554         3458999999765543322 


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ....+.+..+...|+.+|.+.+.+++.+..
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  191 (351)
T 3ruf_A          162 PKVEENIGNPLSPYAVTKYVNEIYAQVYAR  191 (351)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            223345566778999999999998887643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.84  E-value=8.4e-20  Score=152.25  Aligned_cols=163  Identities=16%  Similarity=0.130  Sum_probs=121.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc------hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA------GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +|++|||||+|+||.+++++|+++|++|++++|+...      ..+..+.+.... +.++.++.+|++|++++.+++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            4789999999999999999999999999999986543      233334443321 456889999999999998888752


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                           ++|++||+||.....  .+.+++.+.+++|+.++.++++++..    .     +.++||++||.+.+ +.+...+
T Consensus        81 -----~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----~~~~iv~~SS~~~~-g~~~~~~  143 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKA----H-----GVKNLVFSSSATVY-GNPQYLP  143 (348)
T ss_dssp             -----CEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----T-----TCCEEEEEEEGGGG-CSCSSSS
T ss_pred             -----CCCEEEECCCCcCcc--chhhchHHHHHHHHHHHHHHHHHHHH----h-----CCCEEEEECcHHHh-CCCCCCC
Confidence                 799999999975321  13456788999999999999987543    2     35699999996554 3222222


Q ss_pred             --CCCCCCC-CccchHHHHHHHHHHHHHHh
Q 027991          185 --FDKINDP-SGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 --~~~~~~~-~~~Y~~ska~~~~l~~~~~~  211 (216)
                        .+.+..+ ...|+.||++.+.+++.+..
T Consensus       144 ~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~  173 (348)
T 1ek6_A          144 LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ  173 (348)
T ss_dssp             BCTTSCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Confidence              2233344 67899999999999988753

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=8.1e-20  Score=151.59  Aligned_cols=163  Identities=16%  Similarity=0.001  Sum_probs=121.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH-HHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK-DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+   ....++.++.+|++|.+++.++++.+    
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCHHHHHHHHHHc----
Confidence            4678999999999999999999999999999999875421 111111   11346889999999999999998875    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDK  187 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~  187 (216)
                       ++|++||+||....  ..+.+++...+++|+.++..+++++.+.-        ..+++|++||.+.+.+.+. ....+.
T Consensus        86 -~~d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--------~~~~~v~~SS~~v~g~~~~~~~~E~~  154 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFS--------PETRFYQASTSEMFGLIQAERQDENT  154 (335)
T ss_dssp             -CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHC--------TTSEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             -CCCEEEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHhC--------CCCeEEEEeCHHHhCCCCCCCCCccc
Confidence             68999999997431  11234577899999999999999886541        1369999999755433222 223344


Q ss_pred             CCCCCccchHHHHHHHHHHHHHH
Q 027991          188 INDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +..+...|+.||++.+.+++.+.
T Consensus       155 ~~~p~~~Y~~sK~~~e~~~~~~~  177 (335)
T 1rpn_A          155 PFYPRSPYGVAKLYGHWITVNYR  177 (335)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHH
Confidence            55667799999999999988764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.84  E-value=7.1e-20  Score=152.28  Aligned_cols=158  Identities=17%  Similarity=0.136  Sum_probs=114.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ....++++++|||||+|+||.+++++|+++|++|++++|+.....+..+    .  -.++.++.+|++|++++.++++..
T Consensus        15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~----~--~~~~~~~~~Dl~d~~~~~~~~~~~   88 (333)
T 2q1w_A           15 VPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK----D--HPNLTFVEGSIADHALVNQLIGDL   88 (333)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC----C--CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             eeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh----h--cCCceEEEEeCCCHHHHHHHHhcc
Confidence            3444677899999999999999999999999999999998643221110    0  136788999999999999888752


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc---ccC
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA---YHE  181 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~  181 (216)
                           ++|+|||+||.....   +.+++.  +++|+.++..+++++.+.         +.++||++||.+.+..   .+.
T Consensus        89 -----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~g~~~~~~~  149 (333)
T 2q1w_A           89 -----QPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN---------NVGRFVYFQTALCYGVKPIQQP  149 (333)
T ss_dssp             -----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGCSCCCSSS
T ss_pred             -----CCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh---------CCCEEEEECcHHHhCCCcccCC
Confidence                 689999999986432   334454  999999999999998763         3579999999665420   111


Q ss_pred             CccCCCCCCCC-ccchHHHHHHHHHHHH
Q 027991          182 GIRFDKINDPS-GSFQSSALLLLLLLHL  208 (216)
Q Consensus       182 ~~~~~~~~~~~-~~Y~~ska~~~~l~~~  208 (216)
                      . +++....+. ..|+.+|++.+.+++.
T Consensus       150 ~-~~~E~~~p~~~~Y~~sK~~~E~~~~~  176 (333)
T 2q1w_A          150 V-RLDHPRNPANSSYAISKSANEDYLEY  176 (333)
T ss_dssp             B-CTTSCCCCTTCHHHHHHHHHHHHHHH
T ss_pred             C-CcCCCCCCCCCchHHHHHHHHHHHHh
Confidence            1 221111455 7899999999999876

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=6.6e-20  Score=154.67  Aligned_cols=166  Identities=14%  Similarity=0.058  Sum_probs=122.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-----hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     ++...+..... ...++.++.+|++|.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            689999999999999999999999999999998643     22211111000 1346889999999999999998876  


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRF  185 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~  185 (216)
                         ++|+|||+||....  ..+.+++...+++|+.++.++++++.+...+      +.++||++||.+.+.+.+. ....
T Consensus       102 ---~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~------~~~~iv~~SS~~~~~~~~~~~~~E  170 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELYGKVQEIPQKE  170 (375)
T ss_dssp             ---CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGTCSCSSSSBCT
T ss_pred             ---CCCEEEECCCcccc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------ccceEEEecchhhhCCCCCCCCCc
Confidence               68999999997431  1235677889999999999999999776432      2379999999766543221 2223


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +.+..+...|+.||++.+.+++.+..
T Consensus       171 ~~~~~~~~~Y~~sK~~~e~~~~~~~~  196 (375)
T 1t2a_A          171 TTPFYPRSPYGAAKLYAYWIVVNFRE  196 (375)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            34455677999999999999887653

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.83  E-value=1.5e-19  Score=150.74  Aligned_cols=152  Identities=15%  Similarity=0.084  Sum_probs=116.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ...+.++|++|||||+|+||.++++.|+++|++|++++|+.+.              .++.++.+|++|.+.+.++++  
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~--   76 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM--   76 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT--
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh--
Confidence            4455778899999999999999999999999999999998654              346789999999999888775  


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc---ccC
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA---YHE  181 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~  181 (216)
                           ++|++||+|+...    ...+.+.+.+++|+.++..+++++.+.         +.++||++||...+-.   ...
T Consensus        77 -----~~d~vih~A~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~V~~SS~~vyg~~~~~~~  138 (347)
T 4id9_A           77 -----GVSAVLHLGAFMS----WAPADRDRMFAVNVEGTRRLLDAASAA---------GVRRFVFASSGEVYPENRPEFL  138 (347)
T ss_dssp             -----TCSEEEECCCCCC----SSGGGHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGTTTTSCSSS
T ss_pred             -----CCCEEEECCcccC----cchhhHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEECCHHHhCCCCCCCC
Confidence                 7899999999743    244556889999999999999988552         3569999999654432   112


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ....+.+..+...|+.||.+.+.+++.+.
T Consensus       139 ~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  167 (347)
T 4id9_A          139 PVTEDHPLCPNSPYGLTKLLGEELVRFHQ  167 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence            23334556677899999999999888764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.83  E-value=1.2e-20  Score=149.96  Aligned_cols=140  Identities=13%  Similarity=0.031  Sum_probs=111.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +.+|+++||||+|+||.+++++|+++|+  +|++++|+.++.+...        ..++.++.+|++|+++++++++    
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc----
Confidence            5689999999999999999999999999  9999999976643221        1257789999999988877654    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                         ++|++|||||...     ..+.+++.+++|+.++..+++++.+    .     +.++||++||.++..+        
T Consensus        84 ---~~d~vi~~ag~~~-----~~~~~~~~~~~n~~~~~~~~~~~~~----~-----~~~~iv~~SS~~~~~~--------  138 (242)
T 2bka_A           84 ---GHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKA----G-----GCKHFNLLSSKGADKS--------  138 (242)
T ss_dssp             ---SCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHH----T-----TCCEEEEECCTTCCTT--------
T ss_pred             ---CCCEEEECCCccc-----ccCCcccceeeeHHHHHHHHHHHHH----C-----CCCEEEEEccCcCCCC--------
Confidence               7999999999742     1245678999999999988887543    2     4579999999876532        


Q ss_pred             CCCCCCccchHHHHHHHHHHHHH
Q 027991          187 KINDPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~  209 (216)
                          +...|+.+|++.+.+++.+
T Consensus       139 ----~~~~Y~~sK~~~e~~~~~~  157 (242)
T 2bka_A          139 ----SNFLYLQVKGEVEAKVEEL  157 (242)
T ss_dssp             ----CSSHHHHHHHHHHHHHHTT
T ss_pred             ----CcchHHHHHHHHHHHHHhc
Confidence                2347999999999988754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.83  E-value=4e-19  Score=151.01  Aligned_cols=168  Identities=11%  Similarity=0.060  Sum_probs=119.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH----------------HHHHHHHhhcCCCeEEEEEccC
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK----------------DVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~----------------~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      ..++.++|||||+|+||.+++++|+++|++|++++|......                +....+.... ..++.++.+|+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl   86 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDI   86 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCC
Confidence            346789999999999999999999999999999998643211                1111111111 35688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccCCCC-CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEE
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIMGTP-FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINV  170 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~i  170 (216)
                      +|.+++.++++..     ++|+|||+||..... ...+++++...+++|+.++..+++++.+..        .+.+||++
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--------~~~~~V~~  153 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG--------EECHLVKL  153 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC--------TTCEEEEE
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC--------CCcEEEEe
Confidence            9999999988865     689999999975321 123566677899999999999999986641        12489999


Q ss_pred             cCCcccccccCC-ccCC--------------CCCCCCccchHHHHHHHHHHHHHH
Q 027991          171 SSEGHRLAYHEG-IRFD--------------KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       171 sS~~~~~~~~~~-~~~~--------------~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ||.+.+ +.+.. ...+              ....+...|+.||++.+.+++.+.
T Consensus       154 SS~~vy-g~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  207 (404)
T 1i24_A          154 GTMGEY-GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTC  207 (404)
T ss_dssp             CCGGGG-CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHh-CCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHH
Confidence            997543 32221 1111              244566789999999999887764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.83  E-value=2.6e-19  Score=148.76  Aligned_cols=161  Identities=18%  Similarity=0.142  Sum_probs=116.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||.+++++|+++|++|++++|.........+.+.... +.++.++.+|++|++++.++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            69999999999999999999999999999875433222233333221 346788999999999998888752     699


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC--CCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~--~~~~~  190 (216)
                      +|||+||.....  ...++..+.+++|+.++..+++++..    .     +.++||++||.+.+ +.+...++  +.+..
T Consensus        76 ~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----~~~~iv~~SS~~~~-g~~~~~~~~e~~~~~  143 (338)
T 1udb_A           76 TVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRA----A-----NVKNFIFSSSATVY-GDNPKIPYVESFPTG  143 (338)
T ss_dssp             EEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----H-----TCCEEEEEEEGGGG-CSCCSSSBCTTSCCC
T ss_pred             EEEECCccCccc--cchhcHHHHHHHHHHHHHHHHHHHHh----c-----CCCeEEEEccHHHh-CCCCCCCcCcccCCC
Confidence            999999974311  12345677899999999999886543    2     35699999996544 32222122  22222


Q ss_pred             C-CccchHHHHHHHHHHHHHHh
Q 027991          191 P-SGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       191 ~-~~~Y~~ska~~~~l~~~~~~  211 (216)
                      + ...|+.||++.+.+++.+..
T Consensus       144 ~~~~~Y~~sK~~~e~~~~~~~~  165 (338)
T 1udb_A          144 TPQSPYGKSKLMVEQILTDLQK  165 (338)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHH
Confidence            3 66899999999999988753

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.83  E-value=9.2e-20  Score=151.99  Aligned_cols=167  Identities=13%  Similarity=0.102  Sum_probs=118.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.+.++++|||||+|+||.+++++|+++|  ++|+..+|......  .+.+.......++.++.+|++|.+.+.++++..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            34677899999999999999999999999  67777777642111  111111222357899999999999999998864


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc--CC
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH--EG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~  182 (216)
                           ++|++||+||.....  .+.+++.+.+++|+.++..+++++.+.         +.+++|++||.+.+.+.+  ..
T Consensus        98 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vy~~~~~~~~  161 (346)
T 4egb_A           98 -----DVQVIVNFAAESHVD--RSIENPIPFYDTNVIGTVTLLELVKKY---------PHIKLVQVSTDEVYGSLGKTGR  161 (346)
T ss_dssp             -----TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS---------TTSEEEEEEEGGGGCCCCSSCC
T ss_pred             -----CCCEEEECCcccchh--hhhhCHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEEeCchHHhCCCCcCCC
Confidence                 689999999986422  255667789999999999999988654         346899999975544332  23


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ...+.+..+...|+.+|.+.+.+++.+..
T Consensus       162 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  190 (346)
T 4egb_A          162 FTEETPLAPNSPYSSSKASADMIALAYYK  190 (346)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            33455667778999999999998887653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.82  E-value=4.1e-20  Score=145.40  Aligned_cols=146  Identities=16%  Similarity=0.111  Sum_probs=117.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +++|||||+|+||.+++++|+++|++|++++|+.++.+..         ..++.++.+|++|.+++.++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            6899999999999999999999999999999997664321         2568999999999999988876       58


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  191 (216)
                      |++||+||.....        .+.+++|+.++..+++++.+.         +.+++|++||..+..+.++....+....+
T Consensus        69 d~vi~~a~~~~~~--------~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p  131 (227)
T 3dhn_A           69 DAVISAFNPGWNN--------PDIYDETIKVYLTIIDGVKKA---------GVNRFLMVGGAGSLFIAPGLRLMDSGEVP  131 (227)
T ss_dssp             SEEEECCCC--------------CCSHHHHHHHHHHHHHHHT---------TCSEEEEECCSTTSEEETTEEGGGTTCSC
T ss_pred             CEEEEeCcCCCCC--------hhHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCChhhccCCCCCccccCCcch
Confidence            9999999874211        126888999988888877543         34589999999888777666666667778


Q ss_pred             CccchHHHHHHHHHHHHHH
Q 027991          192 SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...|+.+|++.+.+.+.+.
T Consensus       132 ~~~Y~~sK~~~e~~~~~~~  150 (227)
T 3dhn_A          132 ENILPGVKALGEFYLNFLM  150 (227)
T ss_dssp             GGGHHHHHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            8899999999998877665

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.82  E-value=1.4e-19  Score=151.64  Aligned_cols=168  Identities=15%  Similarity=0.085  Sum_probs=122.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCC--cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           33 TAIVTGATSGIGTETARVLALR-GVHVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++|||||+|+||.+++++|+++ |++|++++|+.  ...+.. +++.   ...++.++.+|++|.+++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            5999999999999999999998 79999999875  222221 1111   1346889999999999999988763     


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--------
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--------  181 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  181 (216)
                      ++|+|||+||...  .+.+.+++.+.+++|+.++.++++++.+.|.......+.+++||++||.+.+-....        
T Consensus        73 ~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           73 QPDAVMHLAAESH--VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             CCSEEEECCSCCC--HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence            7999999999753  122446678899999999999999999987531000001359999999653321110        


Q ss_pred             ---CccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          182 ---GIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       182 ---~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                         ....+.+..+...|+.||++.+.+++.+..
T Consensus       151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  183 (361)
T 1kew_A          151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRR  183 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence               222334456677999999999999988753

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.82  E-value=1.6e-19  Score=149.92  Aligned_cols=161  Identities=14%  Similarity=0.109  Sum_probs=119.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCc--chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +++++|||||+|+||.+++++|+++|  ++|++++|+..  ..+.. +++.   ...++.++.+|++|.+.+.+++.   
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE---DDPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc---cCCceEEEEcCCCCHHHHHHHhh---
Confidence            35679999999999999999999997  89999998642  22221 1111   13468899999999999888872   


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-CCcc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-EGIR  184 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~  184 (216)
                          ++|++||+||...  .+.+.+++.+.+++|+.++.++++++.+.  .      ..++||++||.+.+.... ....
T Consensus        75 ----~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------~~~~iv~~SS~~vyg~~~~~~~~  140 (336)
T 2hun_A           75 ----KVDGVVHLAAESH--VDRSISSPEIFLHSNVIGTYTLLESIRRE--N------PEVRFVHVSTDEVYGDILKGSFT  140 (336)
T ss_dssp             ----TCSEEEECCCCCC--HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--C------TTSEEEEEEEGGGGCCCSSSCBC
T ss_pred             ----CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------CCcEEEEeccHHHHCCCCCCCcC
Confidence                7999999999753  12244567789999999999999999877  1      246999999975432211 1122


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .+.+..+...|+.||++.+.+++.+..
T Consensus       141 E~~~~~~~~~Y~~sK~~~e~~~~~~~~  167 (336)
T 2hun_A          141 ENDRLMPSSPYSATKAASDMLVLGWTR  167 (336)
T ss_dssp             TTBCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence            234455677999999999999987653

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.82  E-value=1.2e-19  Score=149.45  Aligned_cols=146  Identities=16%  Similarity=0.072  Sum_probs=90.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++|||||+|+||.+++++|+++|++|++++|+.+.            ++    ++.+|++|++++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK----FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC----eEEecCCCHHHHHHHHHhh-----C
Confidence            5789999999999999999999999999999987542            11    6789999999999888765     6


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCC
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  190 (216)
                      +|++||+||...+  +.+.+++.+.+++|+.++..+++++.+.          +++||++||.+.+.+.......+.+..
T Consensus        61 ~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~~~~~~~~~E~~~~~  128 (315)
T 2ydy_A           61 PHVIVHCAAERRP--DVVENQPDAASQLNVDASGNLAKEAAAV----------GAFLIYISSDYVFDGTNPPYREEDIPA  128 (315)
T ss_dssp             CSEEEECC---------------------CHHHHHHHHHHHHH----------TCEEEEEEEGGGSCSSSCSBCTTSCCC
T ss_pred             CCEEEECCcccCh--hhhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchHHHcCCCCCCCCCCCCCC
Confidence            8999999998542  2356678889999999999999998763          249999999877554222233344456


Q ss_pred             CCccchHHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~  209 (216)
                      +...|+.+|++.+.+++.+
T Consensus       129 ~~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A          129 PLNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             CCSHHHHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHHh
Confidence            6779999999999998775

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.82  E-value=3.3e-19  Score=148.17  Aligned_cols=151  Identities=16%  Similarity=0.039  Sum_probs=112.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      .++|||||+|+||.+++++|+++|++|++++|+.++.++..        ..++.++.+|++|.+++.++++       ++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA--------YLEPECRVAEMLDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG--------GGCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc--------cCCeEEEEecCCCHHHHHHHHc-------CC
Confidence            37999999999999999999999999999999876644311        2357889999999998887765       68


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~~~  189 (216)
                      |++||+||...    .+.+++.+.+++|+.++.++++++.+.         +.++||++||.+.+.+.+.  ....+.+.
T Consensus        79 d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~~~~~~E~~~~  145 (342)
T 2x4g_A           79 DGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA---------RVPRILYVGSAYAMPRHPQGLPGHEGLFY  145 (342)
T ss_dssp             SEEEEC----------------CHHHHHHHHHHHHHHHHHHH---------TCSCEEEECCGGGSCCCTTSSCBCTTCCC
T ss_pred             CEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEECCHHhhCcCCCCCCCCCCCCC
Confidence            99999999753    234567889999999999999999875         3468999999876654333  22344455


Q ss_pred             CC----CccchHHHHHHHHHHHHHH
Q 027991          190 DP----SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       190 ~~----~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+    ...|+.+|++.+.+++.+.
T Consensus       146 ~p~~~~~~~Y~~sK~~~e~~~~~~~  170 (342)
T 2x4g_A          146 DSLPSGKSSYVLCKWALDEQAREQA  170 (342)
T ss_dssp             SSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CccccccChHHHHHHHHHHHHHHHh
Confidence            55    6789999999999988764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.82  E-value=7e-20  Score=145.77  Aligned_cols=149  Identities=15%  Similarity=0.069  Sum_probs=112.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +.++++|||||+|+||.+++++|+++  |++|++++|+.++.++    +     ..++.++.+|++|++++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~-----~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-----GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-----TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c-----CCCeeEEEecCCCHHHHHHHHc----
Confidence            35689999999999999999999999  8999999998654322    1     3456789999999999988875    


Q ss_pred             hcCCccEEEECCccCCCC-----------CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          107 QHHQLNILINNAGIMGTP-----------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~-----------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                         ++|++||+||.....           .+...+++.+.+++|+.++..+++++.+.         +.++||++||..+
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~iv~~SS~~~  136 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------GVKHIVVVGSMGG  136 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------TCSEEEEEEETTT
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc---------CCCEEEEEcCccC
Confidence               589999999975311           11123444568899999999988877543         3569999999887


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHH
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLH  207 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~  207 (216)
                      ..+.++...|+.     ..|+.+|++.+.+++
T Consensus       137 ~~~~~~~~~~~~-----~~y~~sK~~~e~~~~  163 (253)
T 1xq6_A          137 TNPDHPLNKLGN-----GNILVWKRKAEQYLA  163 (253)
T ss_dssp             TCTTCGGGGGGG-----CCHHHHHHHHHHHHH
T ss_pred             CCCCCccccccc-----hhHHHHHHHHHHHHH
Confidence            654433333432     258889999998775

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.82  E-value=2e-19  Score=149.49  Aligned_cols=161  Identities=21%  Similarity=0.110  Sum_probs=115.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCC--CeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++|++|||||+|+||.+++++|+++|++|+++.|+.+..+... .+.. .+.  .++.++.+|++|.+++.++++     
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLD-LPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHT-STTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHh-cccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            5789999999999999999999999999999999876433222 1111 111  357889999999988887764     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-ccCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRFD  186 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~~~  186 (216)
                        ++|++||+|+... ..  ..+...+.+++|+.++.++++++.+..        ..++||++||.++.++.+.. ..++
T Consensus        77 --~~d~Vih~A~~~~-~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~riV~~SS~~~~~~~~~~~~~~~  143 (337)
T 2c29_D           77 --GCTGVFHVATPMD-FE--SKDPENEVIKPTIEGMLGIMKSCAAAK--------TVRRLVFTSSAGTVNIQEHQLPVYD  143 (337)
T ss_dssp             --TCSEEEECCCCCC-SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS--------CCCEEEEECCGGGTSCSSSCCSEEC
T ss_pred             --CCCEEEEeccccC-CC--CCChHHHHHHHHHHHHHHHHHHHHhCC--------CccEEEEeeeHhhcccCCCCCcccC
Confidence              5799999998642 11  122335689999999999999987753        14699999998876654321 1111


Q ss_pred             CC-----------CCCCccchHHHHHHHHHHHHHH
Q 027991          187 KI-----------NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       187 ~~-----------~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..           ..+...|+.||++.+.++..+.
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  178 (337)
T 2c29_D          144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYA  178 (337)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCchhhhcccCCccchHHHHHHHHHHHHHHHH
Confidence            11           0134479999999998887654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.82  E-value=9e-20  Score=147.10  Aligned_cols=146  Identities=19%  Similarity=0.197  Sum_probs=116.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |++|||||+|+||.+++++|+++|++|++++|+.++..           ..++.++.+|++|++++.++++       ++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            68999999999999999999999999999999875421           1346889999999999888775       58


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~~~  189 (216)
                      |++||+||..      ..+++.+.+++|+.++..+++++.+.         +.++||++||...+.+.+.  ....+.+.
T Consensus        65 d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~~~~~~~E~~~~  129 (267)
T 3ay3_A           65 DGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARNL---------GKPRIVFASSNHTIGYYPRTTRIDTEVPR  129 (267)
T ss_dssp             SEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT---------TCCEEEEEEEGGGSTTSBTTSCBCTTSCC
T ss_pred             CEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCHHHhCCCCCCCCCCCCCCC
Confidence            9999999975      23456789999999999999988642         3579999999876644332  23334555


Q ss_pred             CCCccchHHHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+...|+.+|++.+.+++.+.
T Consensus       130 ~~~~~Y~~sK~~~e~~~~~~~  150 (267)
T 3ay3_A          130 RPDSLYGLSKCFGEDLASLYY  150 (267)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHH
Confidence            667799999999999988764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.81  E-value=2.3e-19  Score=147.60  Aligned_cols=154  Identities=19%  Similarity=0.204  Sum_probs=116.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||.+++++|+++|++|++++|.......       .. ..++.++.+|++|++++.+++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-------NV-PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-------GS-CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-------hc-ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999999999985432211       01 134678899999999999888753     689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc-cC--CccCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-HE--GIRFDKIN  189 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~--~~~~~~~~  189 (216)
                      ++||+|+....  ..+.+++...+++|+.+++++++++.+.         +.++||++||.++.++. +.  ....+.+.
T Consensus        69 ~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~  137 (311)
T 2p5y_A           69 HVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQY---------GVEKLVFASTGGAIYGEVPEGERAEETWPP  137 (311)
T ss_dssp             EEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEHHHHHCCCCTTCCBCTTSCC
T ss_pred             EEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCChhhcCCCCCCCCcCCCCCC
Confidence            99999997431  1245667889999999999999988532         34699999998444443 21  12223344


Q ss_pred             CCCccchHHHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+...|+.||++.+.+++.+.
T Consensus       138 ~~~~~Y~~sK~~~e~~~~~~~  158 (311)
T 2p5y_A          138 RPKSPYAASKAAFEHYLSVYG  158 (311)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHH
Confidence            566799999999999988764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.81  E-value=4.4e-19  Score=149.38  Aligned_cols=157  Identities=11%  Similarity=0.059  Sum_probs=118.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC-CHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~  104 (216)
                      ..|.++++|||||+|+||.++++.|+++ |++|++++|+.+......+       ..++.++.+|++ |.+.+.++++  
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~--   90 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVK--   90 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHH--
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhc--
Confidence            3466789999999999999999999999 8999999998766543221       357899999999 9999888886  


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                           ++|+|||+||...+.  ...++..+.+++|+.++..+++++...         + .++|++||.. .++.....+
T Consensus        91 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~-~~~v~~SS~~-vyg~~~~~~  152 (372)
T 3slg_A           91 -----KCDVILPLVAIATPA--TYVKQPLRVFELDFEANLPIVRSAVKY---------G-KHLVFPSTSE-VYGMCADEQ  152 (372)
T ss_dssp             -----HCSEEEECBCCCCHH--HHHHCHHHHHHHHTTTTHHHHHHHHHH---------T-CEEEEECCGG-GGBSCCCSS
T ss_pred             -----cCCEEEEcCccccHH--HHhhCHHHHHHHHHHHHHHHHHHHHHh---------C-CcEEEeCcHH-HhCCCCCCC
Confidence                 589999999985322  134566788999999999998887654         3 5899999954 444332222


Q ss_pred             CCCCC---------CCCccchHHHHHHHHHHHHHH
Q 027991          185 FDKIN---------DPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       185 ~~~~~---------~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +....         .+...|+.||.+.+.+++.+.
T Consensus       153 ~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~  187 (372)
T 3slg_A          153 FDPDASALTYGPINKPRWIYACSKQLMDRVIWGYG  187 (372)
T ss_dssp             BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccccccCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            22111         455689999999999988775

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.80  E-value=7.7e-19  Score=147.11  Aligned_cols=169  Identities=11%  Similarity=-0.017  Sum_probs=127.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHH-HcCCeEEEEEcCCcch------------HHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAG------------KDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~-~~g~~Vi~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      ....+|++||||||+|||++.+..|+ ..|+.++++++..+..            ....++..+.  +.+...+.||+++
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d  123 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFS  123 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTS
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCC
Confidence            34678999999999999999999998 6899999998765432            2334445555  7789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccCC---------------CC---------------------CCCChHHHHH---
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIMG---------------TP---------------------FMLSKDNIEL---  134 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~---------------~~---------------------~~~~~~~~~~---  134 (216)
                      ++.++++++++++++|+||+||||++...               |.                     ...+.++++.   
T Consensus       124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~  203 (401)
T 4ggo_A          124 DEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVK  203 (401)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHH
Confidence            99999999999999999999999999641               10                     0123444444   


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          135 QFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       135 ~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .|.....+.....+...++|.       +++++|.+|+..+....|.+   .     ...+|..|++++..++.|...
T Consensus       204 vMg~s~~s~w~~al~~a~lla-------~G~siva~SYiGse~t~P~Y---~-----~G~mG~AKaaLEa~~r~La~e  266 (401)
T 4ggo_A          204 VMGGEDWERWIKQLSKEGLLE-------EGCITLAYSYIGPEATQALY---R-----KGTIGKAKEHLEATAHRLNKE  266 (401)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEE-------EEEEEEEEECCCCGGGHHHH---T-----TSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHhhhccc-------CCceEEEEeccCcceeecCC---C-----ccHHHHHHHHHHHHHHHHHHh
Confidence            455556666666777777775       47899999998776543321   1     116799999999999988654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.80  E-value=2.4e-18  Score=142.36  Aligned_cols=154  Identities=16%  Similarity=0.202  Sum_probs=118.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +++|||||+|+||.+++++|+++|++|++++|+.....+       .. ..++.++.+|++|++.+.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED-------AI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------GS-CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh-------hc-CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            579999999999999999999999999999987654321       11 12578899999999999888875     379


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~~~  189 (216)
                      |++||+||.....  .+.+++.+.+++|+.++..+++++.+.         +.+++|++||.+.+ +.+.  ....+.+.
T Consensus        69 d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~Ss~~~~-~~~~~~~~~E~~~~  136 (330)
T 2c20_A           69 EAVMHFAADSLVG--VSMEKPLQYYNNNVYGALCLLEVMDEF---------KVDKFIFSSTAATY-GEVDVDLITEETMT  136 (330)
T ss_dssp             EEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGG-CSCSSSSBCTTSCC
T ss_pred             CEEEECCcccCcc--ccccCHHHHHHHHhHHHHHHHHHHHHc---------CCCEEEEeCCceee-CCCCCCCCCcCCCC
Confidence            9999999975321  144677889999999999999886432         35689999996554 3222  22233445


Q ss_pred             CCCccchHHHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+...|+.+|++.+.+++.+.
T Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~  157 (330)
T 2c20_A          137 NPTNTYGETKLAIEKMLHWYS  157 (330)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHH
Confidence            567799999999999988765

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=1.4e-18  Score=157.77  Aligned_cols=167  Identities=18%  Similarity=0.177  Sum_probs=120.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|++|||||+|+||.+++++|+++|++|++++|+.....+..+.+.... ..++.++.+|++|++++.+++++.  
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~--   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY--   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS--
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC--
Confidence            34678999999999999999999999999999999998655433333333221 356788999999999998888753  


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-----C
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-----E  181 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----~  181 (216)
                         ++|+|||+||.....  ...+...+.+++|+.++..+++++...         +.++||++||.+.+....     .
T Consensus        84 ---~~D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~---------~~~~iV~~SS~~vyg~~~~~~~~~  149 (699)
T 1z45_A           84 ---KIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQY---------NVSKFVFSSSATVYGDATRFPNMI  149 (699)
T ss_dssp             ---CCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCCGGGSTTCC
T ss_pred             ---CCCEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEECcHHHhCCCccccccC
Confidence               789999999975311  122345678999999999998766432         356999999975542211     1


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ....+.+..+...|+.||++.+.+++.+.
T Consensus       150 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  178 (699)
T 1z45_A          150 PIPEECPLGPTNPYGHTKYAIENILNDLY  178 (699)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            12223345567799999999999988764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.80  E-value=3.2e-19  Score=146.59  Aligned_cols=152  Identities=14%  Similarity=0.082  Sum_probs=117.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +++|||||+|+||.+++++|+++|++|++++|+.+......        ...+.++.+|++|.+ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            46999999999999999999999999999999876543221        346788999999987 654442       3 


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKIND  190 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~~~  190 (216)
                      |++||+||..  ..+.+.+++...+++|+.++.++++++.+.         +.++||++||.+.+-.... ....+.+..
T Consensus        64 d~vih~A~~~--~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  132 (312)
T 3ko8_A           64 DVVFHFAANP--EVRLSTTEPIVHFNENVVATFNVLEWARQT---------GVRTVVFASSSTVYGDADVIPTPEEEPYK  132 (312)
T ss_dssp             SEEEECCSSC--SSSGGGSCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CEEEECCCCC--CchhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeCcHHHhCCCCCCCCCCCCCCC
Confidence            9999999964  234466778899999999999999988543         3569999999765533221 223345566


Q ss_pred             CCccchHHHHHHHHHHHHHHh
Q 027991          191 PSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +...|+.||++.+.+++.+..
T Consensus       133 p~~~Y~~sK~~~e~~~~~~~~  153 (312)
T 3ko8_A          133 PISVYGAAKAAGEVMCATYAR  153 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHH
Confidence            778999999999999887753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.80  E-value=8.7e-19  Score=141.26  Aligned_cols=142  Identities=17%  Similarity=0.195  Sum_probs=113.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||.+++++|+ +|++|++++|+.+. +          ++     +.+|++|++++.++++.+     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~~-----~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------GG-----YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------TC-----EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------CC-----ceeccCCHHHHHHHHHhc-----CCC
Confidence            59999999999999999999 58999999998742 1          12     789999999999998865     689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPS  192 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  192 (216)
                      ++|||||....  +.+.+++.+.+++|+.++..+++++.+.          +++||++||..++.+.++....+....+.
T Consensus        60 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~iv~~SS~~~~~~~~~~~~e~~~~~~~  127 (273)
T 2ggs_A           60 VIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKVI----------DSYIVHISTDYVFDGEKGNYKEEDIPNPI  127 (273)
T ss_dssp             EEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEEEEGGGSCSSSCSBCTTSCCCCS
T ss_pred             EEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHHh----------CCeEEEEecceeEcCCCCCcCCCCCCCCC
Confidence            99999997532  1235678899999999999999988542          35999999988776554433344555567


Q ss_pred             ccchHHHHHHHHHHHH
Q 027991          193 GSFQSSALLLLLLLHL  208 (216)
Q Consensus       193 ~~Y~~ska~~~~l~~~  208 (216)
                      ..|+.+|++.+.+++.
T Consensus       128 ~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A          128 NYYGLSKLLGETFALQ  143 (273)
T ss_dssp             SHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHhC
Confidence            7999999999988754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.79  E-value=1.1e-18  Score=143.59  Aligned_cols=152  Identities=16%  Similarity=0.150  Sum_probs=112.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |++|||||+|+||.+++++|+++|..|++..++....+..         ...+.++.+|+++ +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            4799999999999999999999995555544444332211         3468899999999 88777765       78


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKIND  190 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~~~  190 (216)
                      |++||+|+..  ..+.+.+++.+.+++|+.++..+++++.+.         +.++||++||...+..... ....+.+..
T Consensus        65 d~vih~a~~~--~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~iv~~SS~~vyg~~~~~~~~E~~~~~  133 (313)
T 3ehe_A           65 EEVWHIAANP--DVRIGAENPDEIYRNNVLATYRLLEAMRKA---------GVSRIVFTSTSTVYGEAKVIPTPEDYPTH  133 (313)
T ss_dssp             SEEEECCCCC--CCC-CCCCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEECCGGGGCSCSSSSBCTTSCCC
T ss_pred             CEEEECCCCC--ChhhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeCchHHhCcCCCCCCCCCCCCC
Confidence            9999999964  234466778899999999999999886443         4569999999765433221 222334566


Q ss_pred             CCccchHHHHHHHHHHHHHHh
Q 027991          191 PSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +...|+.||++.+.+++.+..
T Consensus       134 ~~~~Y~~sK~~~e~~~~~~~~  154 (313)
T 3ehe_A          134 PISLYGASKLACEALIESYCH  154 (313)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHH
Confidence            777999999999999987753

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.79  E-value=1.3e-18  Score=144.97  Aligned_cols=156  Identities=20%  Similarity=0.170  Sum_probs=116.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++|||||+|+||.+++++|+++  |++|++++|+... ..+..+    .....++.++.+|++|++++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE----AILGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG----GGCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh----hhccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999999  8999999997531 111111    1113578899999999998888775      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc--------
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH--------  180 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  180 (216)
                       ++|++||+||....  +.+.+++.+.+++|+.++..+++++.+.         + ++||++||.+.+....        
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---------~-~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           75 -KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY---------D-IRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             -TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH---------T-CEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             -cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh---------C-CeEEEecccceeCCCccccccccc
Confidence             46999999997531  2234567789999999999999999875         2 3999999965432211        


Q ss_pred             -----CCccCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          181 -----EGIRFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       181 -----~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                           .....+.+..+...|+.||++.+.+++.+.
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  176 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWV  176 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence                 122223345567799999999999988764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.79  E-value=1.2e-18  Score=146.06  Aligned_cols=159  Identities=13%  Similarity=0.085  Sum_probs=115.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++++|||||+|+||.+++++|+++| ++|++++|+......  +    ..+.  +. +.+|++|++.++++++.  
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~----~~~~--~~-~~~d~~~~~~~~~~~~~--  110 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--V----NLVD--LN-IADYMDKEDFLIQIMAG--  110 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG--G----GTTT--SC-CSEEEEHHHHHHHHHTT--
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh--h----cccC--ce-EeeecCcHHHHHHHHhh--
Confidence            34677899999999999999999999999 899999998654210  0    1112  22 67899999888877763  


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-Ccc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIR  184 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~  184 (216)
                      ..++++|++||+||....    +.+++.+.+++|+.++..+++++.+.         +. +||++||.+.+.+.+. ...
T Consensus       111 ~~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~---------~~-r~V~~SS~~v~g~~~~~~~~  176 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER---------EI-PFLYASSAATYGGRTSDFIE  176 (357)
T ss_dssp             CCCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH---------TC-CEEEEEEGGGGCSCSSCCCS
T ss_pred             cccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEcchHHhCCCCCCCcC
Confidence            235689999999998543    34457889999999999999998763         34 8999999765433222 222


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+....+...|+.+|++.+.+++.+.
T Consensus       177 E~~~~~p~~~Y~~sK~~~E~~~~~~~  202 (357)
T 2x6t_A          177 SREYEKPLNVFGYSKFLFDEYVRQIL  202 (357)
T ss_dssp             SGGGCCCSSHHHHHHHHHHHHHHHHG
T ss_pred             CcCCCCCCChhHHHHHHHHHHHHHHH
Confidence            33445567799999999999998875

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.79  E-value=1.5e-18  Score=141.40  Aligned_cols=141  Identities=20%  Similarity=0.257  Sum_probs=112.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ..+++|||||+|+||.+++++|+++|++|++++|+                       .+|++|.+++.++++..     
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc-----
Confidence            45789999999999999999999999999999886                       27999999999888765     


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKI  188 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~  188 (216)
                      ++|++||+||....  +.+.+++.+.+++|+.++..+++++.+.         +. +||++||.+.+.+.+. ....+.+
T Consensus        63 ~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~---------~~-~iv~~SS~~v~~~~~~~~~~E~~~  130 (292)
T 1vl0_A           63 KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV---------GA-EIVQISTDYVFDGEAKEPITEFDE  130 (292)
T ss_dssp             CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH---------TC-EEEEEEEGGGSCSCCSSCBCTTSC
T ss_pred             CCCEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEechHHeECCCCCCCCCCCCC
Confidence            68999999997432  2235678899999999999999998763         23 8999999765543321 2233444


Q ss_pred             CCCCccchHHHHHHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..+...|+.+|++.+.+++.+.
T Consensus       131 ~~~~~~Y~~sK~~~E~~~~~~~  152 (292)
T 1vl0_A          131 VNPQSAYGKTKLEGENFVKALN  152 (292)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHC
T ss_pred             CCCccHHHHHHHHHHHHHHhhC
Confidence            5567799999999999987753

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.79  E-value=1.9e-19  Score=141.15  Aligned_cols=136  Identities=15%  Similarity=0.128  Sum_probs=107.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~i  111 (216)
                      ++|||||+|+||.+++++|+++|++|++++|+.++.+..          .++.++++|++| ++++.++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHc-------CC
Confidence            599999999999999999999999999999997654321          468899999999 888877664       68


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  191 (216)
                      |++||+||...+          +.+++|+.++..+++++.+    .     +.++||++||.++..+.+...   ....+
T Consensus        65 d~vi~~ag~~~~----------~~~~~n~~~~~~l~~a~~~----~-----~~~~iv~~SS~~~~~~~~~~e---~~~~~  122 (219)
T 3dqp_A           65 DAIINVSGSGGK----------SLLKVDLYGAVKLMQAAEK----A-----EVKRFILLSTIFSLQPEKWIG---AGFDA  122 (219)
T ss_dssp             SEEEECCCCTTS----------SCCCCCCHHHHHHHHHHHH----T-----TCCEEEEECCTTTTCGGGCCS---HHHHH
T ss_pred             CEEEECCcCCCC----------CcEeEeHHHHHHHHHHHHH----h-----CCCEEEEECcccccCCCcccc---ccccc
Confidence            999999998641          1677899999988888743    2     356999999987766533211   22334


Q ss_pred             CccchHHHHHHHHHHH
Q 027991          192 SGSFQSSALLLLLLLH  207 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~  207 (216)
                      ...|+.+|++.+.+.+
T Consensus       123 ~~~Y~~sK~~~e~~~~  138 (219)
T 3dqp_A          123 LKDYYIAKHFADLYLT  138 (219)
T ss_dssp             THHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHH
Confidence            5689999999998874

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.79  E-value=2.5e-18  Score=145.43  Aligned_cols=156  Identities=17%  Similarity=0.120  Sum_probs=117.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +++++|||||+|+||.+++++|+++|++|++++|+.+.....      .  ..++.++.+|++|.+++.++++       
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~-------   92 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE-------   92 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC-------
Confidence            467999999999999999999999999999999987553211      0  2357889999999999888774       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC----ccC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG----IRF  185 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----~~~  185 (216)
                      ++|++||+||..... ..+.+++.+.+++|+.++.++++++.+.         +.++||++||.+.+......    ..+
T Consensus        93 ~~d~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~~V~~SS~~v~~~~~~~~~~~~~~  162 (379)
T 2c5a_A           93 GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN---------GIKRFFYASSACIYPEFKQLETTNVSL  162 (379)
T ss_dssp             TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEEEEGGGSCGGGSSSSSSCEE
T ss_pred             CCCEEEECceecCcc-cccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeehheeCCCCCCCccCCCc
Confidence            689999999975321 1114567889999999999999988543         34699999996554322110    111


Q ss_pred             --CC--CCCCCccchHHHHHHHHHHHHHH
Q 027991          186 --DK--INDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 --~~--~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                        +.  ...+...|+.+|++.+.+++.+.
T Consensus       163 ~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~  191 (379)
T 2c5a_A          163 KESDAWPAEPQDAFGLEKLATEELCKHYN  191 (379)
T ss_dssp             CGGGGSSBCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCCCCChhHHHHHHHHHHHHHHH
Confidence              11  34566789999999999987764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.78  E-value=7.6e-19  Score=144.22  Aligned_cols=153  Identities=14%  Similarity=0.065  Sum_probs=118.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++++|||||+|+||.+++++|+++  |++|++++|+....+     +.     .++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc----
Confidence            367999999999999999999999  899999999876532     11     13568899999999999888754    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~  186 (216)
                       ++|++||+||.....   ..+++.+.+++|+.++..+++++.+.         +.+++|++||...+.+.+.  ....+
T Consensus        68 -~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~~~~e~  134 (312)
T 2yy7_A           68 -KITDIYLMAALLSAT---AEKNPAFAWDLNMNSLFHVLNLAKAK---------KIKKIFWPSSIAVFGPTTPKENTPQY  134 (312)
T ss_dssp             -TCCEEEECCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHTT---------SCSEEECCEEGGGCCTTSCSSSBCSS
T ss_pred             -CCCEEEECCccCCCc---hhhChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHHhCCCCCCCCcccc
Confidence             689999999974321   23567889999999999999987542         3469999999766543222  22233


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHH
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+..+...|+.+|++.+.+++.+.
T Consensus       135 ~~~~~~~~Y~~sK~~~e~~~~~~~  158 (312)
T 2yy7_A          135 TIMEPSTVYGISKQAGERWCEYYH  158 (312)
T ss_dssp             CBCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCchhHHHHHHHHHHHHHHH
Confidence            445667799999999999987764

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.78  E-value=1.1e-18  Score=136.83  Aligned_cols=136  Identities=13%  Similarity=0.095  Sum_probs=104.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHH-HcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLA-LRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~-~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      |+++||||+|+||.+++++|+ ++|++|++++|+.+ ++++..    ..  ..++.++++|++|+++++++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc-------
Confidence            789999999999999999999 89999999999976 554432    12  4578999999999999988875       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      ++|++|||||..                 |+.     ++.+++.|++.     +.++||++||..+..+.+....... .
T Consensus        73 ~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~~-----~~~~iv~iSs~~~~~~~~~~~~~~~-~  124 (221)
T 3r6d_A           73 NAEVVFVGAMES-----------------GSD-----MASIVKALSRX-----NIRRVIGVSMAGLSGEFPVALEKWT-F  124 (221)
T ss_dssp             TCSEEEESCCCC-----------------HHH-----HHHHHHHHHHT-----TCCEEEEEEETTTTSCSCHHHHHHH-H
T ss_pred             CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHhc-----CCCeEEEEeeceecCCCCccccccc-c
Confidence            689999999963                 222     78888888875     5689999999887765443211000 0


Q ss_pred             CCCc-cchHHHHHHHHHHHH
Q 027991          190 DPSG-SFQSSALLLLLLLHL  208 (216)
Q Consensus       190 ~~~~-~Y~~ska~~~~l~~~  208 (216)
                      .... .|+.+|.+.+.+.+.
T Consensus       125 ~~~~~~y~~~K~~~e~~~~~  144 (221)
T 3r6d_A          125 DNLPISYVQGERQARNVLRE  144 (221)
T ss_dssp             HTSCHHHHHHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHHh
Confidence            1122 799999999987764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.78  E-value=3.4e-18  Score=141.95  Aligned_cols=156  Identities=16%  Similarity=0.118  Sum_probs=115.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc---C---CeEEEEEcCCcc--hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           33 TAIVTGATSGIGTETARVLALR---G---VHVVMGVRDIAA--GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~---g---~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++|||||+|+||.+++++|+++   |   ++|++++|+...  .+.. +.+   ....++.++.+|++|++++.+++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~---   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APV---DADPRLRFVHGDIRDAGLLAREL---   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGG---TTCTTEEEEECCTTCHHHHHHHT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhc---ccCCCeEEEEcCCCCHHHHHHHh---
Confidence            5999999999999999999997   8   999999986421  1111 111   11356889999999999888776   


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-CCc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-EGI  183 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~  183 (216)
                          +++|++||+||....  +.+.+++.+.+++|+.++.++++++.+.         ..++||++||.+.+.... ...
T Consensus        75 ----~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~---------~~~~~v~~SS~~vyg~~~~~~~  139 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA---------GVGRVVHVSTNQVYGSIDSGSW  139 (337)
T ss_dssp             ----TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCCCSSSCB
T ss_pred             ----cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEecchHHhCCCCCCCC
Confidence                379999999997531  1234566789999999999999998775         245899999975443221 112


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..+.+..+...|+.||++.+.+++.+.
T Consensus       140 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~  166 (337)
T 1r6d_A          140 TESSPLEPNSPYAASKAGSDLVARAYH  166 (337)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence            223345567799999999999988765

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.77  E-value=3.2e-18  Score=140.91  Aligned_cols=148  Identities=18%  Similarity=0.230  Sum_probs=115.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           33 TAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++|||||+|+||.+++++|+++  |++|++++|+....+             .+.++.+|++|++++.+++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhc-----C
Confidence            3899999999999999999999  889999998765421             2467899999999999888752     7


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCCCC
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~~  188 (216)
                      +|++||+||....   ...+++.+.+++|+.++.++++++.+.         +.+++|++||...+.+...  ....+..
T Consensus        63 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~~~~~~e~~~  130 (317)
T 3ajr_A           63 IDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH---------RVEKVVIPSTIGVFGPETPKNKVPSITI  130 (317)
T ss_dssp             CCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCTTSCSSSBCSSSC
T ss_pred             CcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc---------CCCEEEEecCHHHhCCCCCCCCcccccc
Confidence            9999999997432   134567789999999999999987643         3569999999876544321  2223344


Q ss_pred             CCCCccchHHHHHHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..+...|+.||++.+.+++.+.
T Consensus       131 ~~p~~~Y~~sK~~~e~~~~~~~  152 (317)
T 3ajr_A          131 TRPRTMFGVTKIAAELLGQYYY  152 (317)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHH
Confidence            5567799999999999887664

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.77  E-value=1.2e-17  Score=129.00  Aligned_cols=140  Identities=14%  Similarity=0.040  Sum_probs=104.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++++||||+|+||.+++++|+++|++|++++|+.++.+..        ...++.++.+|++|++++.++++       
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------
Confidence            347899999999999999999999999999999987654321        03468899999999999888775       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      ++|++||+||.....   +.      .++|+.++..+++++.+.         +.+++|++||.......+...      
T Consensus        67 ~~d~vi~~a~~~~~~---~~------~~~n~~~~~~~~~~~~~~---------~~~~~v~~Ss~~~~~~~~~~~------  122 (206)
T 1hdo_A           67 GQDAVIVLLGTRNDL---SP------TTVMSEGARNIVAAMKAH---------GVDKVVACTSAFLLWDPTKVP------  122 (206)
T ss_dssp             TCSEEEECCCCTTCC---SC------CCHHHHHHHHHHHHHHHH---------TCCEEEEECCGGGTSCTTCSC------
T ss_pred             CCCEEEECccCCCCC---Cc------cchHHHHHHHHHHHHHHh---------CCCeEEEEeeeeeccCccccc------
Confidence            579999999976431   11      137888887777776543         356999999985543322111      


Q ss_pred             CCCccchHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~  208 (216)
                      .+...|+.+|++.+.+.+.
T Consensus       123 ~~~~~y~~~K~~~e~~~~~  141 (206)
T 1hdo_A          123 PRLQAVTDDHIRMHKVLRE  141 (206)
T ss_dssp             GGGHHHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHh
Confidence            0455899999999988753

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.77  E-value=8e-19  Score=144.70  Aligned_cols=159  Identities=19%  Similarity=0.142  Sum_probs=108.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ||++|||||+|+||.+++++|+++|++|+++.| +.+..+.. +.+. ..+  ..++.++.+|++|+++++++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLT-NLPGASEKLHFFNADLSNPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHH-TSTTHHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHH-hhhccCCceEEEecCCCCHHHHHHHHc-----
Confidence            588999999999999999999999999999888 54221110 0111 111  1257889999999998888775     


Q ss_pred             cCCccEEEECCccCCCCCCCChHH-HHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-ccC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDN-IELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-IRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~~  185 (216)
                        ++|++||+|+..    +.+.++ +.+++++|+.+++++++++.+..        +.++||++||.++..+.+.. ..+
T Consensus        74 --~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~--------~~~~iV~~SS~~~~~~~~~~~~~~  139 (322)
T 2p4h_X           74 --GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILKACVNSK--------TVKRFIYTSSGSAVSFNGKDKDVL  139 (322)
T ss_dssp             --TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS--------SCCEEEEEEEGGGTSCSSSCCSEE
T ss_pred             --CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeccHHHcccCCCCCeec
Confidence              579999999753    112222 34589999999999999886541        24699999998876554321 111


Q ss_pred             CCC----------CCCCc-cchHHHHHHHHHHHHHH
Q 027991          186 DKI----------NDPSG-SFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 ~~~----------~~~~~-~Y~~ska~~~~l~~~~~  210 (216)
                      +..          ..+.. .|+.||++.+.+...+.
T Consensus       140 ~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~  175 (322)
T 2p4h_X          140 DESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFG  175 (322)
T ss_dssp             CTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccchhhhcccCcccccHHHHHHHHHHHHHHHH
Confidence            111          01222 69999999988876654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.77  E-value=8.2e-19  Score=148.25  Aligned_cols=160  Identities=12%  Similarity=0.039  Sum_probs=115.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++++|||||+|+||.+++++|+++| ++|++++|+.+...+...      ...++.++.+|++|++++.++++   
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~------~~~~v~~~~~Dl~d~~~l~~~~~---   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP------DHPAVRFSETSITDDALLASLQD---   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC------CCTTEEEECSCTTCHHHHHHCCS---
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc------CCCceEEEECCCCCHHHHHHHhh---
Confidence            34678899999999999999999999999 999999998654321110      13568899999999988776654   


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                          ++|+|||+||....  ..+.+++.+.+++|+.++..+++++.+.        .+.++||++||.+.+-. ....++
T Consensus        99 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~~V~~SS~~vyg~-~~~~~~  163 (377)
T 2q1s_A           99 ----EYDYVFHLATYHGN--QSSIHDPLADHENNTLTTLKLYERLKHF--------KRLKKVVYSAAGCSIAE-KTFDDA  163 (377)
T ss_dssp             ----CCSEEEECCCCSCH--HHHHHCHHHHHHHHTHHHHHHHHHHTTC--------SSCCEEEEEEEC------------
T ss_pred             ----CCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEeCCHHHcCC-CCCCCc
Confidence                78999999997532  1234567889999999999999887422        02358999999654322 211111


Q ss_pred             ----CC---CC-CCCccchHHHHHHHHHHHHHH
Q 027991          186 ----DK---IN-DPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 ----~~---~~-~~~~~Y~~ska~~~~l~~~~~  210 (216)
                          +.   +. .+...|+.+|++.+.+++.+.
T Consensus       164 ~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  196 (377)
T 2q1s_A          164 KATEETDIVSLHNNDSPYSMSKIFGEFYSVYYH  196 (377)
T ss_dssp             ---CCCCCCCSSCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CcccccccccccCCCCchHHHHHHHHHHHHHHH
Confidence                11   23 566789999999999988764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.76  E-value=4.8e-18  Score=145.84  Aligned_cols=158  Identities=14%  Similarity=0.096  Sum_probs=113.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc---chHHHHHHHHhhc-------CCCeEEEEEccCCCHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA---AGKDVKETIVKEI-------PSAKVDAMELDLSSLASV   97 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~---~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~~   97 (216)
                      ...++++|||||+|+||.+++++|+++|++|++++|+.+   ..+...+.+...+       ...++.++.+|++|++.+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            355789999999999999999999999999999999987   3333333333221       135789999999998877


Q ss_pred             HHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc
Q 027991           98 RNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL  177 (216)
Q Consensus        98 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  177 (216)
                      .        ..+++|+|||+||...     ..+++.+.+++|+.++.++++++.+  .        ..++|++||...  
T Consensus       146 ~--------~~~~~d~Vih~A~~~~-----~~~~~~~~~~~Nv~g~~~l~~aa~~--~--------~~~~v~~SS~~~--  200 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIRLAQQ--H--------HARLIYVSTISV--  200 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH--T--------TCEEEEEEEGGG--
T ss_pred             C--------CcCCCCEEEECCcccC-----CCCCHHHHHHHHHHHHHHHHHHHHh--c--------CCcEEEECchHh--
Confidence            6        4568999999999863     2356778999999999999999877  1        358999999776  


Q ss_pred             ccc-----CCccC--CCC---CCCCccchHHHHHHHHHHHHHH
Q 027991          178 AYH-----EGIRF--DKI---NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       178 ~~~-----~~~~~--~~~---~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      |..     ...++  +..   ..+...|+.||.+.+.+++.+.
T Consensus       201 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  243 (427)
T 4f6c_A          201 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAV  243 (427)
T ss_dssp             GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHH
Confidence            221     11111  111   3367799999999999988764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.76  E-value=8.6e-19  Score=145.66  Aligned_cols=158  Identities=16%  Similarity=0.097  Sum_probs=108.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH--HHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV--KETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +|++|||||+|+||.+++++|+++|++|+++.|+.+..+..  ...+. .  ..++.++++|++|++++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            68899999999999999999999999999988876543221  11221 1  3468889999999988877764      


Q ss_pred             CCccEEEECCccCCCCCCCChHHH-HHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-----
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNI-ELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-----  182 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  182 (216)
                       ++|++||+|+....    ..++. .+.+++|+.++.++++++.+..        ..++||++||.++..+.+..     
T Consensus        80 -~~D~Vih~A~~~~~----~~~~~~~~~~~~nv~gt~~ll~aa~~~~--------~v~r~V~~SS~~~~~~~~~~~~~~~  146 (338)
T 2rh8_A           80 -GCDFVFHVATPVHF----ASEDPENDMIKPAIQGVVNVMKACTRAK--------SVKRVILTSSAAAVTINQLDGTGLV  146 (338)
T ss_dssp             -TCSEEEEESSCCCC-------------CHHHHHHHHHHHHHHHHCT--------TCCEEEEECCHHHHHHHHHTCSCCC
T ss_pred             -CCCEEEEeCCccCC----CCCCcHHHHHHHHHHHHHHHHHHHHHcC--------CcCEEEEEecHHHeecCCcCCCCcc
Confidence             57999999986421    22222 4589999999999999987642        14589999998755432211     


Q ss_pred             ccCCC--------CCCC-CccchHHHHHHHHHHHHHH
Q 027991          183 IRFDK--------INDP-SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       183 ~~~~~--------~~~~-~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...+.        +..+ ...|+.||++.+.++..+.
T Consensus       147 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  183 (338)
T 2rh8_A          147 VDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFA  183 (338)
T ss_dssp             CCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHH
T ss_pred             cChhhccchhhccccCCccchHHHHHHHHHHHHHHHH
Confidence            11111        1111 1269999999998887654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.76  E-value=1.4e-17  Score=138.47  Aligned_cols=152  Identities=15%  Similarity=0.057  Sum_probs=111.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~  109 (216)
                      +++|||||+|+||.+++++|+++ |++|++++|+.++.+...       ...++.++.+|++| .+.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            46999999999999999999998 899999999876644321       13468899999998 456666665       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC--CC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~--~~  187 (216)
                      ++|++||+||...+.  ...+++.+.+++|+.++..+++++.+.         + ++||++||.+.+...+. ..+  +.
T Consensus        67 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~-~~~v~~SS~~v~g~~~~-~~~~e~~  133 (345)
T 2bll_A           67 KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY---------R-KRIIFPSTSEVYGMCSD-KYFDEDH  133 (345)
T ss_dssp             HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT---------T-CEEEEECCGGGGBTCCC-SSBCTTT
T ss_pred             CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHHh---------C-CeEEEEecHHHcCCCCC-CCcCCcc
Confidence            479999999975321  123467789999999999988887542         3 69999999655432221 112  11


Q ss_pred             C-------CCCCccchHHHHHHHHHHHHHH
Q 027991          188 I-------NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       188 ~-------~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .       ..+...|+.+|++.+.+++.+.
T Consensus       134 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  163 (345)
T 2bll_A          134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYG  163 (345)
T ss_dssp             CCCBCCCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred             cccccCcccCcccccHHHHHHHHHHHHHHH
Confidence            1       1234489999999999987764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.75  E-value=1.7e-17  Score=136.38  Aligned_cols=146  Identities=16%  Similarity=0.105  Sum_probs=112.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +++|||||+|+||.++++.|+++|++|++++|+....+     +      .++.++.+|++ .+++.++++       ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~------~~~~~~~~Dl~-~~~~~~~~~-------~~   63 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I------NDYEYRVSDYT-LEDLINQLN-------DV   63 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C------CceEEEEcccc-HHHHHHhhc-------CC
Confidence            68999999999999999999999999999999843321     1      15788999999 888887765       78


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-CCccCCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-EGIRFDKIND  190 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~~~~~~~  190 (216)
                      |++||+||.....      +..+.+++|+.++..+++++...         +..++|++||...+.+.. .....+....
T Consensus        64 d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~---------~~~r~v~~SS~~vyg~~~~~~~~E~~~~~  128 (311)
T 3m2p_A           64 DAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN---------NISNIVYASTISAYSDETSLPWNEKELPL  128 (311)
T ss_dssp             SEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCCGGGCSBCTTSCCC
T ss_pred             CEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHHHhCCCCCCCCCCCCCCC
Confidence            9999999986433      34557889999999998888543         345899999954443222 2223345666


Q ss_pred             CCccchHHHHHHHHHHHHHHh
Q 027991          191 PSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +...|+.+|.+.+.+++.+..
T Consensus       129 p~~~Y~~sK~~~E~~~~~~~~  149 (311)
T 3m2p_A          129 PDLMYGVSKLACEHIGNIYSR  149 (311)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHH
Confidence            778999999999998887654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.75  E-value=6.6e-18  Score=137.24  Aligned_cols=138  Identities=16%  Similarity=0.170  Sum_probs=111.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||.++++.|+++|++|++++|.                       ++|++|.+.+.++++..     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            79999999999999999999999999999982                       27999999999998876     789


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc-CCccCCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH-EGIRFDKINDP  191 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~~~~~~~~  191 (216)
                      ++||+||....  +...+++.+.+++|+.++..+++++.+.          +.++|++||...+.+.. .....+.+..+
T Consensus        59 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p  126 (287)
T 3sc6_A           59 IIIHCAAYTKV--DQAEKERDLAYVINAIGARNVAVASQLV----------GAKLVYISTDYVFQGDRPEGYDEFHNPAP  126 (287)
T ss_dssp             EEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCCCCSSCBCTTSCCCC
T ss_pred             EEEECCcccCh--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchhhhcCCCCCCCCCCCCCCCC
Confidence            99999998532  1123567889999999999999988554          33799999976554332 22333456667


Q ss_pred             CccchHHHHHHHHHHHHHH
Q 027991          192 SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...|+.+|.+.+.+++.+.
T Consensus       127 ~~~Y~~sK~~~E~~~~~~~  145 (287)
T 3sc6_A          127 INIYGASKYAGEQFVKELH  145 (287)
T ss_dssp             CSHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHhC
Confidence            7899999999999887653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.75  E-value=1.1e-17  Score=132.77  Aligned_cols=115  Identities=17%  Similarity=0.118  Sum_probs=86.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+..|++|||||+|+||.++++.|+++| ++|++++|+.++++..        ...++.++++|++|+++++++++   
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~---   87 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ---   87 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT---
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc---
Confidence            33456899999999999999999999999 8999999997765421        13468899999999999998876   


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                          ++|+||||+|..      .   +           ...++.+++.|+++     +.++||++||..++.+.+.
T Consensus        88 ----~~D~vv~~a~~~------~---~-----------~~~~~~~~~~~~~~-----~~~~iV~iSS~~~~~~~~~  134 (236)
T 3qvo_A           88 ----GQDIVYANLTGE------D---L-----------DIQANSVIAAMKAC-----DVKRLIFVLSLGIYDEVPG  134 (236)
T ss_dssp             ----TCSEEEEECCST------T---H-----------HHHHHHHHHHHHHT-----TCCEEEEECCCCC------
T ss_pred             ----CCCEEEEcCCCC------c---h-----------hHHHHHHHHHHHHc-----CCCEEEEEecceecCCCCc
Confidence                679999999852      1   0           13456788888875     5689999999887765554

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.74  E-value=1.8e-17  Score=129.35  Aligned_cols=136  Identities=15%  Similarity=0.122  Sum_probs=92.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||.+++++|+++|++|++++|+.++.+..         ...+.++.+|++|++.  +.       +.++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~D~~d~~~--~~-------~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT---------HKDINILQKDIFDLTL--SD-------LSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH---------CSSSEEEECCGGGCCH--HH-------HTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc---------cCCCeEEeccccChhh--hh-------hcCCC
Confidence            599999999999999999999999999999997654322         1457899999999877  22       24789


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~~~~  190 (216)
                      ++||+||.....           .++|+.+    ++.+++.+++.     +.+++|++||..+..+.+.  ...++....
T Consensus        64 ~vi~~ag~~~~~-----------~~~~~~~----~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  123 (221)
T 3ew7_A           64 VVVDAYGISPDE-----------AEKHVTS----LDHLISVLNGT-----VSPRLLVVGGAASLQIDEDGNTLLESKGLR  123 (221)
T ss_dssp             EEEECCCSSTTT-----------TTSHHHH----HHHHHHHHCSC-----CSSEEEEECCCC------------------
T ss_pred             EEEECCcCCccc-----------cchHHHH----HHHHHHHHHhc-----CCceEEEEecceEEEcCCCCccccccCCCC
Confidence            999999984221           2234444    45555555553     4689999999988877665  233445555


Q ss_pred             CCccchHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLL  206 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~  206 (216)
                      +...|+.+|.+.+.+.
T Consensus       124 ~~~~y~~~k~~~e~~~  139 (221)
T 3ew7_A          124 EAPYYPTARAQAKQLE  139 (221)
T ss_dssp             -CCCSCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            6678999999998874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.74  E-value=1.5e-17  Score=144.97  Aligned_cols=161  Identities=20%  Similarity=0.157  Sum_probs=115.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc---CCeEEEEEcCCcchHHHHHHHHhhcC--------------CCeEEEEEc
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALR---GVHVVMGVRDIAAGKDVKETIVKEIP--------------SAKVDAMEL   89 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~---g~~Vi~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~   89 (216)
                      ...++|+||||||+|+||.+++++|+++   |++|++++|+.+.. ...+.+.....              ..++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            3457899999999999999999999999   89999999987643 23333333322              257999999


Q ss_pred             cCC------CHHHHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC
Q 027991           90 DLS------SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG  163 (216)
Q Consensus        90 Dv~------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~  163 (216)
                      |++      +.+.+.++++       ++|+|||+||....      +.+.+.+++|+.++..+++++.+.         +
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~~---------~  205 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALTT---------K  205 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTSS---------S
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHhC---------C
Confidence            999      5567776665       58999999998643      233467899999999999887542         3


Q ss_pred             CcEEEEEcCCcccccccCCccCC--CCCCC-----------CccchHHHHHHHHHHHHHHh
Q 027991          164 EGRIINVSSEGHRLAYHEGIRFD--KINDP-----------SGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       164 ~g~iv~isS~~~~~~~~~~~~~~--~~~~~-----------~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ..++|++||.+.+ +......+.  ....+           ...|+.||.+.+.+++.+..
T Consensus       206 ~~~~V~iSS~~v~-~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  265 (478)
T 4dqv_A          206 LKPFTYVSTADVG-AAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREAND  265 (478)
T ss_dssp             CCCEEEEEEGGGG-TTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeehhhc-CccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHH
Confidence            4589999996543 222222221  11111           13599999999999987753

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.73  E-value=3.3e-17  Score=136.53  Aligned_cols=156  Identities=13%  Similarity=0.109  Sum_probs=109.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..++++++|||||+|+||.+++++|+++|++|++++|+........+.+   ....++.++.+|+++..           
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~-----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL-----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC-----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh-----------
Confidence            4467889999999999999999999999999999998754322111111   11346889999998852           


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                       +.++|+|||+||......  ..+++...+++|+.++..+++++.+.          +.++|++||.+.+ +.....++.
T Consensus        89 -~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~-g~~~~~~~~  154 (343)
T 2b69_A           89 -YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVY-GDPEVHPQS  154 (343)
T ss_dssp             -CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGG-BSCSSSSBC
T ss_pred             -hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEECcHHHh-CCCCCCCCc
Confidence             357999999999753211  12345678999999999999988653          2389999996543 322211111


Q ss_pred             -------CCCCCCccchHHHHHHHHHHHHHH
Q 027991          187 -------KINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       187 -------~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                             .+..+...|+.||++.+.+++.+.
T Consensus       155 E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  185 (343)
T 2b69_A          155 EDYWGHVNPIGPRACYDEGKRVAETMCYAYM  185 (343)
T ss_dssp             TTCCCBCCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCCCCCchHHHHHHHHHHHHHHH
Confidence                   234456689999999999987764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.72  E-value=2e-17  Score=129.64  Aligned_cols=138  Identities=12%  Similarity=0.057  Sum_probs=98.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||.+++++|+++|++|++++|+.++.+..    .    ...+.++.+|++|++.  +.       ++++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~----~~~~~~~~~D~~d~~~--~~-------~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----L----GATVATLVKEPLVLTE--AD-------LDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----T----CTTSEEEECCGGGCCH--HH-------HTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----c----CCCceEEecccccccH--hh-------cccCC
Confidence            599999999999999999999999999999987654322    1    3568899999999877  22       24789


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--ccCC--CC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--IRFD--KI  188 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~~~--~~  188 (216)
                      ++||+||......         ..++|+.++    +.+++.+++.     + +++|++||.++..+.+..  ..++  ..
T Consensus        65 ~vi~~ag~~~~~~---------~~~~n~~~~----~~l~~a~~~~-----~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~  125 (224)
T 3h2s_A           65 AVVDALSVPWGSG---------RGYLHLDFA----THLVSLLRNS-----D-TLAVFILGSASLAMPGADHPMILDFPES  125 (224)
T ss_dssp             EEEECCCCCTTSS---------CTHHHHHHH----HHHHHTCTTC-----C-CEEEEECCGGGSBCTTCSSCGGGGCCGG
T ss_pred             EEEECCccCCCcc---------hhhHHHHHH----HHHHHHHHHc-----C-CcEEEEecceeeccCCCCccccccCCCC
Confidence            9999999862111         124566665    4455555553     3 899999998777655432  1222  22


Q ss_pred             CCCCccchHHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLLL  206 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~  206 (216)
                      ..+...|+.+|++.+.+.
T Consensus       126 ~~~~~~y~~sK~~~e~~~  143 (224)
T 3h2s_A          126 AASQPWYDGALYQYYEYQ  143 (224)
T ss_dssp             GGGSTTHHHHHHHHHHHH
T ss_pred             CccchhhHHHHHHHHHHH
Confidence            223668999999998653

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.72  E-value=4.6e-18  Score=132.34  Aligned_cols=132  Identities=17%  Similarity=0.072  Sum_probs=105.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++++||||+|+||.+++++|+++|+  +|++++|+.++          .  ..++.++.+|++|++++.+++       
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~-------   65 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS-------   65 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC-------
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh-------
Confidence            57899999999999999999999998  99999998764          1  345788899999887665543       


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                        +|++||+||....    ..+++++.+++|+.++..+++++.+.         +.+++|++||.....+          
T Consensus        66 --~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~----------  120 (215)
T 2a35_A           66 --IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADAK----------  120 (215)
T ss_dssp             --CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT----------
T ss_pred             --hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc---------CCCEEEEECCcccCCC----------
Confidence              8999999997421    24567889999999999999887543         3568999999766431          


Q ss_pred             CCCCccchHHHHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~  208 (216)
                        +...|+.+|++.+.+++.
T Consensus       121 --~~~~y~~sK~~~e~~~~~  138 (215)
T 2a35_A          121 --SSIFYNRVKGELEQALQE  138 (215)
T ss_dssp             --CSSHHHHHHHHHHHHHTT
T ss_pred             --CccHHHHHHHHHHHHHHH
Confidence              234899999999988754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.72  E-value=8.6e-17  Score=145.28  Aligned_cols=156  Identities=14%  Similarity=0.033  Sum_probs=114.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHH-HHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~~~~~  106 (216)
                      ++++++|||||+|+||.+++++|+++ |++|++++|+.+..+...       ...++.++.+|++|.++ ++++++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCcHHHHHHhhc----
Confidence            56789999999999999999999998 899999999876543211       13568899999999765 555554    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc-cC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI-RF  185 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-~~  185 (216)
                         ++|++||+||...+.  ...+++.+.+++|+.++..+++++.+.         + +++|++||...+.+.+... ..
T Consensus       382 ---~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~---------~-~r~V~~SS~~vyg~~~~~~~~E  446 (660)
T 1z7e_A          382 ---KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY---------R-KRIIFPSTSEVYGMCSDKYFDE  446 (660)
T ss_dssp             ---HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT---------T-CEEEEECCGGGGBTCCSSSBCT
T ss_pred             ---CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh---------C-CEEEEEecHHHcCCCCCcccCC
Confidence               579999999975421  124567789999999999998887643         2 6999999976543322111 11


Q ss_pred             CCC-------CCCCccchHHHHHHHHHHHHHH
Q 027991          186 DKI-------NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       186 ~~~-------~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +..       ..+...|+.||.+.+.+++.+.
T Consensus       447 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~  478 (660)
T 1z7e_A          447 DHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYG  478 (660)
T ss_dssp             TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CccccccCcccCCCCCcHHHHHHHHHHHHHHH
Confidence            111       1345589999999999987764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.72  E-value=5.4e-17  Score=132.91  Aligned_cols=153  Identities=13%  Similarity=0.089  Sum_probs=112.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++|||||+|+||.+++++|+++| ++|++++|+......  ..+.    +.  . +.+|++|.+.++++++...  ++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~----~~--~-~~~d~~~~~~~~~~~~~~~--~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNLV----DL--N-IADYMDKEDFLIQIMAGEE--FGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHHH----TS--C-CSEEEEHHHHHHHHHTTCC--CSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh--hhcC----cc--e-eccccccHHHHHHHHhccc--cCCC
Confidence            38999999999999999999999 899999988654211  1111    11  2 6789999888877765211  2369


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKIND  190 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~~~  190 (216)
                      |++||+||....    +.+++.+.+++|+.++..+++++.+.         +. ++|++||.+.+.+.+. ....+....
T Consensus        70 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~-~~v~~SS~~v~g~~~~~~~~E~~~~~  135 (310)
T 1eq2_A           70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER---------EI-PFLYASSAATYGGRTSDFIESREYEK  135 (310)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH---------TC-CEEEEEEGGGGTTCCSCBCSSGGGCC
T ss_pred             cEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEeeHHHhCCCCCCCCCCCCCCC
Confidence            999999997643    33457789999999999999988653         34 8999999765433222 222334456


Q ss_pred             CCccchHHHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +...|+.+|.+.+.+++.+.
T Consensus       136 p~~~Y~~sK~~~e~~~~~~~  155 (310)
T 1eq2_A          136 PLNVYGYSKFLFDEYVRQIL  155 (310)
T ss_dssp             CSSHHHHHHHHHHHHHHHHG
T ss_pred             CCChhHHHHHHHHHHHHHHH
Confidence            67799999999999988775

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.72  E-value=3.1e-17  Score=133.93  Aligned_cols=141  Identities=14%  Similarity=0.068  Sum_probs=109.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|+||.+++++|+ +|++|++++|+..                   ++.+|++|.+++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999998751                   2568999999999888764     689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKINDP  191 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~~~~  191 (216)
                      ++||+||.....  .+.+++.+.+++|+.++..+++++.+.          +.++|++||.+.+.+.+. ....+.+..+
T Consensus        57 ~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p  124 (299)
T 1n2s_A           57 VIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANET----------GAWVVHYSTDYVFPGTGDIPWQETDATSP  124 (299)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTTT----------TCEEEEEEEGGGSCCCTTCCBCTTSCCCC
T ss_pred             EEEECcccCCHh--hhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEecccEEeCCCCCCCCCCCCCCC
Confidence            999999975321  123456788999999999999987432          238999999765543322 2223445566


Q ss_pred             CccchHHHHHHHHHHHHHH
Q 027991          192 SGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...|+.+|++.+.+++.+.
T Consensus       125 ~~~Y~~sK~~~E~~~~~~~  143 (299)
T 1n2s_A          125 LNVYGKTKLAGEKALQDNC  143 (299)
T ss_dssp             SSHHHHHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHHHHHHhC
Confidence            7799999999999887653

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.71  E-value=1.5e-16  Score=131.05  Aligned_cols=143  Identities=12%  Similarity=0.090  Sum_probs=108.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .++++|||||+|+||.+++++|+++|++|++++|+.                      .+|++|.+++.+++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            457899999999999999999999999999887752                      26999999999888765     


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC--CC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF--DK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~--~~  187 (216)
                      ++|++||+||..... ....++..+.+++|+.++..+++++.+.         +.+++|++||...+.+.. ..++  +.
T Consensus        55 ~~d~vih~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~vyg~~~-~~~~~E~~  123 (321)
T 1e6u_A           55 RIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN---------DVNKLLFLGSSCIYPKLA-KQPMAESE  123 (321)
T ss_dssp             CCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGSCTTC-CSSBCGGG
T ss_pred             CCCEEEEcCeecCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEccHHHcCCCC-CCCcCccc
Confidence            689999999975311 1234566788999999999999888653         345899999976543221 1112  11


Q ss_pred             ----CCCCC-ccchHHHHHHHHHHHHHH
Q 027991          188 ----INDPS-GSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       188 ----~~~~~-~~Y~~ska~~~~l~~~~~  210 (216)
                          ...+. ..|+.+|++.+.+++.+.
T Consensus       124 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~  151 (321)
T 1e6u_A          124 LLQGTLEPTNEPYAIAKIAGIKLCESYN  151 (321)
T ss_dssp             TTSSCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence                23332 489999999999888764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.70  E-value=1.5e-17  Score=135.26  Aligned_cols=141  Identities=18%  Similarity=0.044  Sum_probs=106.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +++++|||| +|+||.++++.|+++|++|++++|+.+..            ..++.++.+|++|.+.+.++++      +
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------C
Confidence            457899999 59999999999999999999999987652            2457889999999988877665      2


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKI  188 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~  188 (216)
                      ++|++||+||..       ..+....+++|+.++..+++++..    .     +.+++|++||...+....+ ....+.+
T Consensus        63 ~~d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~~----~-----~~~~~v~~SS~~vyg~~~~~~~~E~~~  126 (286)
T 3gpi_A           63 RPEILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALEG----A-----PLQHVFFVSSTGVYGQEVEEWLDEDTP  126 (286)
T ss_dssp             CCSEEEECHHHH-------HHC-----CCSHHHHHHHHHHTTT----S-----CCCEEEEEEEGGGCCCCCSSEECTTSC
T ss_pred             CCCEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHhh----C-----CCCEEEEEcccEEEcCCCCCCCCCCCC
Confidence            599999999973       344567889999999988887752    2     3569999999754433222 1233455


Q ss_pred             CCCCccchHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLL  205 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l  205 (216)
                      ..+...|+.+|.+.+.+
T Consensus       127 ~~p~~~Y~~sK~~~E~~  143 (286)
T 3gpi_A          127 PIAKDFSGKRMLEAEAL  143 (286)
T ss_dssp             CCCCSHHHHHHHHHHHH
T ss_pred             CCCCChhhHHHHHHHHH
Confidence            66778999999999887

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.68  E-value=1.3e-16  Score=130.47  Aligned_cols=148  Identities=14%  Similarity=0.080  Sum_probs=106.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.++++|||||+|+||.+++++|+++|+      +....             ...+.++.+|++|.+.+.++++..   
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~---   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-------------WVFVSSKDADLTDTAQTRALFEKV---   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-------------EEECCTTTCCTTSHHHHHHHHHHS---
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-------------ccccCceecccCCHHHHHHHHhhc---
Confidence            46678999999999999999999999997      11100             123444578999999999888753   


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC-
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD-  186 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~-  186 (216)
                        ++|++||+|+..... ..+.++..+.+++|+.++.++++++.+.         +..++|++||.+.+ +.+...+++ 
T Consensus        61 --~~d~Vih~A~~~~~~-~~~~~~~~~~~~~nv~gt~~ll~a~~~~---------~~~~~v~~SS~~vy-g~~~~~~~~E  127 (319)
T 4b8w_A           61 --QPTHVIHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEV---------GARKVVSCLSTCIF-PDKTTYPIDE  127 (319)
T ss_dssp             --CCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEECCGGGS-CSSCCSSBCG
T ss_pred             --CCCEEEECceecccc-cccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEEcchhhc-CCCCCCCccc
Confidence              689999999984311 1234456778999999999999887543         34589999997543 333222221 


Q ss_pred             -C----CCCCCc-cchHHHHHHHHHHHHHH
Q 027991          187 -K----INDPSG-SFQSSALLLLLLLHLLF  210 (216)
Q Consensus       187 -~----~~~~~~-~Y~~ska~~~~l~~~~~  210 (216)
                       .    ...+.. .|+.||.+.+.+++.+.
T Consensus       128 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~  157 (319)
T 4b8w_A          128 TMIHNGPPHNSNFGYSYAKRMIDVQNRAYF  157 (319)
T ss_dssp             GGGGBSCCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence             1    333444 59999999999887764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.68  E-value=1.8e-17  Score=136.29  Aligned_cols=153  Identities=18%  Similarity=0.041  Sum_probs=102.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +.++++|||||+|+||.+++++|+++|++|++++|+........+.+.......++.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4568999999999999999999999999999999986521000000000011123445555554                


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDK  187 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~  187 (216)
                       ++|++||+||......  ..++....++ |+.++..+++++.+.         +..++|++||...+..... ....+.
T Consensus        69 -~~d~vi~~a~~~~~~~--~~~~~~~~~~-n~~~~~~ll~a~~~~---------~v~~~v~~SS~~v~~~~~~~~~~E~~  135 (321)
T 3vps_A           69 -DVRLVYHLASHKSVPR--SFKQPLDYLD-NVDSGRHLLALCTSV---------GVPKVVVGSTCEVYGQADTLPTPEDS  135 (321)
T ss_dssp             -TEEEEEECCCCCCHHH--HTTSTTTTHH-HHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             -cCCEEEECCccCChHH--HHhCHHHHHH-HHHHHHHHHHHHHHc---------CCCeEEEecCHHHhCCCCCCCCCCCC
Confidence             6899999999864211  1112233556 999999998888655         2458999999765443322 223345


Q ss_pred             CCCCCccchHHHHHHHHHHHHHH
Q 027991          188 INDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       188 ~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +..+...|+.+|.+.+.+++.+.
T Consensus       136 ~~~p~~~Y~~sK~~~E~~~~~~~  158 (321)
T 3vps_A          136 PLSPRSPYAASKVGLEMVAGAHQ  158 (321)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHH
Confidence            56677899999999999888765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.62  E-value=3.8e-15  Score=120.78  Aligned_cols=128  Identities=15%  Similarity=0.110  Sum_probs=99.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      |++|||||+|+||.+++++|+++  |++|++++|+.++.+...        ...+.++.+|++|++++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA--------DQGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH--------HTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh--------hcCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999999  999999999876654322        1246789999999998887765       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      ++|++||+||..  .   . +      ++|+.++.++++++...         +.++||++||.....         .  
T Consensus        66 ~~d~vi~~a~~~--~---~-~------~~n~~~~~~l~~a~~~~---------~~~~~v~~Ss~~~~~---------~--  113 (287)
T 2jl1_A           66 GVSKLLFISGPH--Y---D-N------TLLIVQHANVVKAARDA---------GVKHIAYTGYAFAEE---------S--  113 (287)
T ss_dssp             TCSEEEECCCCC--S---C-H------HHHHHHHHHHHHHHHHT---------TCSEEEEEEETTGGG---------C--
T ss_pred             cCCEEEEcCCCC--c---C-c------hHHHHHHHHHHHHHHHc---------CCCEEEEECCCCCCC---------C--
Confidence            589999999962  1   1 1      57888888888777432         346999999976531         0  


Q ss_pred             CCCccchHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~  208 (216)
                        ...|+.+|.+.+.+.+.
T Consensus       114 --~~~y~~~K~~~E~~~~~  130 (287)
T 2jl1_A          114 --IIPLAHVHLATEYAIRT  130 (287)
T ss_dssp             --CSTHHHHHHHHHHHHHH
T ss_pred             --CCchHHHHHHHHHHHHH
Confidence              12799999999988753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.59  E-value=4.4e-15  Score=130.19  Aligned_cols=155  Identities=14%  Similarity=0.096  Sum_probs=110.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc---hHHHHHHHHhh-------cCCCeEEEEEccCCCHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA---GKDVKETIVKE-------IPSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~---~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      .+++|||||+|+||.+++++|.++|++|++++|+...   .+...+.+...       ....++.++.+|+++++.+.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4789999999999999999999999999999998763   22332322211       11467999999999977766  


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                            ...++|+|||+|+...     ....+...+++|+.++.++++++.+  .        ..++|++||.+.  |..
T Consensus       228 ------~~~~~D~Vih~Aa~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~--~--------~~~~v~iSS~~v--G~~  284 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIRLAQQ--H--------HARLIYVSTISV--GTY  284 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT--T--------TCEEEEEEESCT--TSE
T ss_pred             ------CccCCCEEEECCceec-----CCCCHHHHhhhHHHHHHHHHHHHHh--C--------CCcEEEeCChhh--ccC
Confidence                  3468999999999863     2234567889999999999998865  1        358999999776  221


Q ss_pred             -----CCccC--CCC---CCCCccchHHHHHHHHHHHHHH
Q 027991          181 -----EGIRF--DKI---NDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       181 -----~~~~~--~~~---~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                           ...++  +..   ..+...|+.||.+.+.+++.+.
T Consensus       285 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  324 (508)
T 4f6l_B          285 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAV  324 (508)
T ss_dssp             ECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHH
Confidence                 11111  111   2366799999999998887754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.59  E-value=4.5e-14  Score=118.41  Aligned_cols=134  Identities=19%  Similarity=0.159  Sum_probs=96.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEcc-CCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD-LSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~~~~~~~~~~~~~  108 (216)
                      .+++++||||+|+||.++++.|+++|++|++++|+.++..  .+.+..   ..++.++.+| ++|++++.++++      
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh------
Confidence            4678999999999999999999999999999999876642  122321   2357889999 999999888775      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcc-cccccCCccCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGH-RLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~-~~~~~~~~~~~  186 (216)
                       ++|++|||++....             +.|..+     +.+++.+.+.     + .++||++||... .++.       
T Consensus        73 -~~d~Vi~~a~~~~~-------------~~~~~~-----~~l~~aa~~~-----g~v~~~V~~SS~~~~~~~~-------  121 (352)
T 1xgk_A           73 -GAHLAFINTTSQAG-------------DEIAIG-----KDLADAAKRA-----GTIQHYIYSSMPDHSLYGP-------  121 (352)
T ss_dssp             -TCSEEEECCCSTTS-------------CHHHHH-----HHHHHHHHHH-----SCCSEEEEEECCCGGGTSS-------
T ss_pred             -cCCEEEEcCCCCCc-------------HHHHHH-----HHHHHHHHHc-----CCccEEEEeCCccccccCC-------
Confidence             57999999875310             124333     4444555543     3 469999999762 2221       


Q ss_pred             CCCCCCccchHHHHHHHHHHHH
Q 027991          187 KINDPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~  208 (216)
                         .+...|+.||++.+.+++.
T Consensus       122 ---~~~~~y~~sK~~~E~~~~~  140 (352)
T 1xgk_A          122 ---WPAVPMWAPKFTVENYVRQ  140 (352)
T ss_dssp             ---CCCCTTTHHHHHHHHHHHT
T ss_pred             ---CCCccHHHHHHHHHHHHHH
Confidence               2234789999999988764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.57  E-value=6.8e-14  Score=116.65  Aligned_cols=142  Identities=12%  Similarity=0.015  Sum_probs=99.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |..+++|||||+|+||.++++.|+++|++|++++|+........+.+.... ...+.++.+|++|.+++.+++++.    
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE-DKGAIIVYGLINEQEAMEKILKEH----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHHHT----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH-hCCcEEEEeecCCHHHHHHHHhhC----
Confidence            446789999999999999999999999999999998733222222221111 346889999999999999988753    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                       ++|++||++|..                 |+.++.++++++...-        .-.++|+  |.++..     ......
T Consensus        83 -~~d~Vi~~a~~~-----------------n~~~~~~l~~aa~~~g--------~v~~~v~--S~~g~~-----~~e~~~  129 (346)
T 3i6i_A           83 -EIDIVVSTVGGE-----------------SILDQIALVKAMKAVG--------TIKRFLP--SEFGHD-----VNRADP  129 (346)
T ss_dssp             -TCCEEEECCCGG-----------------GGGGHHHHHHHHHHHC--------CCSEEEC--SCCSSC-----TTTCCC
T ss_pred             -CCCEEEECCchh-----------------hHHHHHHHHHHHHHcC--------CceEEee--cccCCC-----CCccCc
Confidence             789999999972                 7777777777765542        0346664  433321     112233


Q ss_pred             CCCCccchHHHHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~  208 (216)
                      ..+...|+.+|.+.+.+.+.
T Consensus       130 ~~p~~~y~~sK~~~e~~l~~  149 (346)
T 3i6i_A          130 VEPGLNMYREKRRVRQLVEE  149 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHH
Confidence            45566899999998877754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.56  E-value=3.1e-14  Score=115.20  Aligned_cols=125  Identities=15%  Similarity=0.073  Sum_probs=90.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           33 TAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++|||||+|+||.++++.|+++  |++|++++|+.++.+...        ...+.++.+|++|++++.++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA--------AQGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH--------HTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh--------cCCCeEEEcCCCCHHHHHHHHh-------C
Confidence            3899999999999999999999  999999999877654322        1246789999999998887764       5


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCC
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIND  190 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  190 (216)
                      +|++||+||...              +.|+.++..+++++.    +.     +.++||++||..+. +            
T Consensus        66 ~d~vi~~a~~~~--------------~~~~~~~~~l~~a~~----~~-----~~~~~v~~Ss~~~~-~------------  109 (286)
T 2zcu_A           66 VEKLLLISSSEV--------------GQRAPQHRNVINAAK----AA-----GVKFIAYTSLLHAD-T------------  109 (286)
T ss_dssp             CSEEEECC----------------------CHHHHHHHHHH----HH-----TCCEEEEEEETTTT-T------------
T ss_pred             CCEEEEeCCCCc--------------hHHHHHHHHHHHHHH----Hc-----CCCEEEEECCCCCC-C------------
Confidence            799999999621              135556555555553    33     35699999997664 1            


Q ss_pred             CCccchHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~  208 (216)
                      ....|+.+|.+.+.+.+.
T Consensus       110 ~~~~y~~sK~~~e~~~~~  127 (286)
T 2zcu_A          110 SPLGLADEHIETEKMLAD  127 (286)
T ss_dssp             CCSTTHHHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHH
Confidence            012799999999988754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.55  E-value=7.3e-14  Score=114.04  Aligned_cols=138  Identities=12%  Similarity=0.029  Sum_probs=96.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|+++||||+|+||.+++++|+++| ++|++++|+.++...  +.+..    ..+.++.+|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            4789999999999999999999999 999999998765421  22221    347789999999999888775       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      ++|++||++|.....          ..+.|+.+    ++.+++.+.+.     +.++||++|+ .+..+.+..       
T Consensus        72 ~~d~vi~~a~~~~~~----------~~~~~~~~----~~~~~~aa~~~-----gv~~iv~~S~-~~~~~~~~~-------  124 (299)
T 2wm3_A           72 GAYATFIVTNYWESC----------SQEQEVKQ----GKLLADLARRL-----GLHYVVYSGL-ENIKKLTAG-------  124 (299)
T ss_dssp             TCSEEEECCCHHHHT----------CHHHHHHH----HHHHHHHHHHH-----TCSEEEECCC-CCHHHHTTT-------
T ss_pred             cCCEEEEeCCCCccc----------cchHHHHH----HHHHHHHHHHc-----CCCEEEEEcC-ccccccCCC-------
Confidence            589999999863110          12334444    44455555544     4568998554 444332211       


Q ss_pred             CCCccchHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~  208 (216)
                      .+...|+.+|.+.+.+.+.
T Consensus       125 ~~~~~y~~sK~~~e~~~~~  143 (299)
T 2wm3_A          125 RLAAAHFDGKGEVEEYFRD  143 (299)
T ss_dssp             SCCCHHHHHHHHHHHHHHH
T ss_pred             cccCchhhHHHHHHHHHHH
Confidence            1234799999999988764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.51  E-value=2.1e-13  Score=110.49  Aligned_cols=134  Identities=11%  Similarity=0.049  Sum_probs=94.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +++||||+ |+||.++++.|+++|++|++++|+.++.+...        ...+.++.+|++|.+            ..++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR--------ASGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH--------HTTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh--------hCCCeEEEecccccc------------cCCC
Confidence            68999998 99999999999999999999999977654322        235889999999932            4589


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--ccCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--IRFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~~~~~~  189 (216)
                      |++||+|+.....   .  .              .++.++..+.+..   .+..++|++||.+.+ +.+..  ...+...
T Consensus        65 d~vi~~a~~~~~~---~--~--------------~~~~l~~a~~~~~---~~~~~~v~~Ss~~vy-g~~~~~~~~E~~~~  121 (286)
T 3ius_A           65 THLLISTAPDSGG---D--P--------------VLAALGDQIAARA---AQFRWVGYLSTTAVY-GDHDGAWVDETTPL  121 (286)
T ss_dssp             CEEEECCCCBTTB---C--H--------------HHHHHHHHHHHTG---GGCSEEEEEEEGGGG-CCCTTCEECTTSCC
T ss_pred             CEEEECCCccccc---c--H--------------HHHHHHHHHHhhc---CCceEEEEeecceec-CCCCCCCcCCCCCC
Confidence            9999999975321   1  0              1133444444310   034689999997443 33322  2334566


Q ss_pred             CCCccchHHHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~  209 (216)
                      .+...|+.+|.+.+.+.+.+
T Consensus       122 ~p~~~Y~~sK~~~E~~~~~~  141 (286)
T 3ius_A          122 TPTAARGRWRVMAEQQWQAV  141 (286)
T ss_dssp             CCCSHHHHHHHHHHHHHHHS
T ss_pred             CCCCHHHHHHHHHHHHHHhh
Confidence            67778999999999888765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.51  E-value=1.2e-13  Score=115.43  Aligned_cols=103  Identities=14%  Similarity=0.082  Sum_probs=84.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-----CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRG-----VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g-----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ++++|||||+|+||.+++++|+++|     ++|++++|+.....         ....++.++.+|++|++++.++++.. 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPL-   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcC-
Confidence            4689999999999999999999999     99999999876532         11356889999999999888777532 


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHH
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDT  153 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  153 (216)
                         +.+|++||+||...       ++..+.+++|+.++.++++++.+.
T Consensus        71 ---~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~  108 (364)
T 2v6g_A           71 ---TDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPN  108 (364)
T ss_dssp             ---TTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ---CCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHh
Confidence               24999999999752       246778999999999999988765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.49  E-value=2.4e-13  Score=119.49  Aligned_cols=143  Identities=16%  Similarity=0.046  Sum_probs=100.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++++|||||+|+||.++++.|+++|++|++++|+..+.+                .+.+|+.+..         .+.+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~----------------~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG----------------KRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT----------------CEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc----------------ceeecccchh---------HHhcCC
Confidence            578999999999999999999999999999999976521                2567776431         223358


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC-CCC
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD-KIN  189 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~-~~~  189 (216)
                      +|+|||+||..... ..+.+....++++|+.++.++++++..   +.     +.+++|++||.+.+........++ ...
T Consensus       202 ~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~-----~~~r~V~~SS~~vyg~~~~~~~~~E~~~  272 (516)
T 3oh8_A          202 ADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVAE---ST-----QCTTMISASAVGFYGHDRGDEILTEESE  272 (516)
T ss_dssp             CSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHHH---CS-----SCCEEEEEEEGGGGCSEEEEEEECTTSC
T ss_pred             CCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHHh---cC-----CCCEEEEeCcceEecCCCCCCccCCCCC
Confidence            99999999985322 446677888999999999999997432   11     356899999965443122222222 222


Q ss_pred             CCCccchHHHHHHHHHHH
Q 027991          190 DPSGSFQSSALLLLLLLH  207 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~  207 (216)
                      .+...|+.+|...+.+..
T Consensus       273 ~~~~~y~~~~~~~E~~~~  290 (516)
T 3oh8_A          273 SGDDFLAEVCRDWEHATA  290 (516)
T ss_dssp             CCSSHHHHHHHHHHHTTH
T ss_pred             CCcChHHHHHHHHHHHHH
Confidence            256678888887776544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.47  E-value=9.7e-13  Score=107.49  Aligned_cols=132  Identities=17%  Similarity=0.145  Sum_probs=88.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-------cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-------AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      +++++||||+|+||.++++.|+++|++|++++|+.       ++.+.. +++.    ...+.++++|++|++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~----~~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQ----SLGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHH----HTTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHH----hCCCEEEEeCCCCHHHHHHHHh-
Confidence            46799999999999999999999999999999986       332221 2222    2347889999999998888775 


Q ss_pred             HHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCC
Q 027991          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  182 (216)
                            ++|++||++|...                 +.+...++++    +.+.     + .+++|  .|.++....   
T Consensus        76 ------~~d~vi~~a~~~~-----------------~~~~~~l~~a----a~~~-----g~v~~~v--~S~~g~~~~---  118 (307)
T 2gas_A           76 ------QVDIVICAAGRLL-----------------IEDQVKIIKA----IKEA-----GNVKKFF--PSEFGLDVD---  118 (307)
T ss_dssp             ------TCSEEEECSSSSC-----------------GGGHHHHHHH----HHHH-----CCCSEEE--CSCCSSCTT---
T ss_pred             ------CCCEEEECCcccc-----------------cccHHHHHHH----HHhc-----CCceEEe--ecccccCcc---
Confidence                  6899999999742                 2233334443    3433     3 45776  344432211   


Q ss_pred             ccCCCCCCC-CccchHHHHHHHHHHHH
Q 027991          183 IRFDKINDP-SGSFQSSALLLLLLLHL  208 (216)
Q Consensus       183 ~~~~~~~~~-~~~Y~~ska~~~~l~~~  208 (216)
                        ......+ ...| .+|.+.+.+.+.
T Consensus       119 --~~~~~~p~~~~y-~sK~~~e~~~~~  142 (307)
T 2gas_A          119 --RHDAVEPVRQVF-EEKASIRRVIEA  142 (307)
T ss_dssp             --SCCCCTTHHHHH-HHHHHHHHHHHH
T ss_pred             --cccCCCcchhHH-HHHHHHHHHHHH
Confidence              0111122 3478 999998887754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.46  E-value=8.7e-13  Score=108.07  Aligned_cols=141  Identities=15%  Similarity=0.100  Sum_probs=92.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch-HHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG-KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .++++||||+|+||.++++.|+++|++|++++|+.... .+..+.+... ....+.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF-KQLGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH-HTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH-HhCCeEEEeCCCCCHHHHHHHHh-------
Confidence            36799999999999999999999999999999985431 1111122111 13457889999999999888775       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCccCCCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      ++|++||++|.....             .|+.+...+++++    .+.     + .+++|+  |.++.....    ....
T Consensus        76 ~~d~vi~~a~~~~~~-------------~~~~~~~~l~~aa----~~~-----g~v~~~v~--S~~g~~~~~----~~~~  127 (313)
T 1qyd_A           76 QVDVVISALAGGVLS-------------HHILEQLKLVEAI----KEA-----GNIKRFLP--SEFGMDPDI----MEHA  127 (313)
T ss_dssp             TCSEEEECCCCSSSS-------------TTTTTHHHHHHHH----HHS-----CCCSEEEC--SCCSSCTTS----CCCC
T ss_pred             CCCEEEECCccccch-------------hhHHHHHHHHHHH----Hhc-----CCCceEEe--cCCcCCccc----cccC
Confidence            689999999975321             1455555555544    332     2 457774  444322110    0112


Q ss_pred             CCC-CccchHHHHHHHHHHHH
Q 027991          189 NDP-SGSFQSSALLLLLLLHL  208 (216)
Q Consensus       189 ~~~-~~~Y~~ska~~~~l~~~  208 (216)
                      ..+ ...| .+|.+.+.+.+.
T Consensus       128 ~~p~~~~y-~sK~~~e~~~~~  147 (313)
T 1qyd_A          128 LQPGSITF-IDKRKVRRAIEA  147 (313)
T ss_dssp             CSSTTHHH-HHHHHHHHHHHH
T ss_pred             CCCCcchH-HHHHHHHHHHHh
Confidence            222 4468 999998877753

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.45  E-value=5.3e-13  Score=108.29  Aligned_cols=106  Identities=21%  Similarity=0.209  Sum_probs=80.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++|||||+|+||.++++.|.++ |++|++++|+.++.....        ...+.++.+|++|++++.++++       ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            4999999999999999999998 899999999987644321        3468899999999999888775       68


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      |++||+||...+.            ..|+.++    +.+++.+++.     +.++||++||..
T Consensus        67 d~vi~~a~~~~~~------------~~~~~~~----~~l~~aa~~~-----gv~~iv~~Ss~~  108 (289)
T 3e48_A           67 DTVVFIPSIIHPS------------FKRIPEV----ENLVYAAKQS-----GVAHIIFIGYYA  108 (289)
T ss_dssp             SEEEECCCCCCSH------------HHHHHHH----HHHHHHHHHT-----TCCEEEEEEESC
T ss_pred             CEEEEeCCCCccc------------hhhHHHH----HHHHHHHHHc-----CCCEEEEEcccC
Confidence            9999999974321            1244444    4444555543     456999999954

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.43  E-value=1.7e-12  Score=106.12  Aligned_cols=83  Identities=17%  Similarity=0.222  Sum_probs=64.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch--HHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG--KDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++++||||+|+||.++++.|+++|++|++++|+....  .+..+.+... ....+.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHc------
Confidence            46799999999999999999999999999999985432  1222222111 13457889999999999888876      


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                       ++|++||+++..
T Consensus        77 -~~d~vi~~a~~~   88 (308)
T 1qyc_A           77 -NVDVVISTVGSL   88 (308)
T ss_dssp             -TCSEEEECCCGG
T ss_pred             -CCCEEEECCcch
Confidence             589999999963

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.42  E-value=6.3e-13  Score=109.46  Aligned_cols=132  Identities=15%  Similarity=0.113  Sum_probs=88.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cc----hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AA----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++||||+|+||.++++.|+++|++|++++|+. ..    ..+..+.+.    ...+.++.+|++|++++.++++    
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~----~~~v~~v~~D~~d~~~l~~a~~----   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR----SMGVTIIEGEMEEHEKMVSVLK----   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT----
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh----cCCcEEEEecCCCHHHHHHHHc----
Confidence            5799999999999999999999999999999986 21    111112222    2357889999999999888775    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCC-CcEEEEEcCCcccccccCCccC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGG-EGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~  185 (216)
                         ++|++||++|...                 +.+    .+.+++.+.+.     + .++||  .|.++....     .
T Consensus        77 ---~~d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~-----g~v~~~v--~S~~g~~~~-----~  120 (321)
T 3c1o_A           77 ---QVDIVISALPFPM-----------------ISS----QIHIINAIKAA-----GNIKRFL--PSDFGCEED-----R  120 (321)
T ss_dssp             ---TCSEEEECCCGGG-----------------SGG----GHHHHHHHHHH-----CCCCEEE--CSCCSSCGG-----G
T ss_pred             ---CCCEEEECCCccc-----------------hhh----HHHHHHHHHHh-----CCccEEe--ccccccCcc-----c
Confidence               5899999999742                 222    34444444443     3 45776  344432110     0


Q ss_pred             CCCCCC-CccchHHHHHHHHHHHH
Q 027991          186 DKINDP-SGSFQSSALLLLLLLHL  208 (216)
Q Consensus       186 ~~~~~~-~~~Y~~ska~~~~l~~~  208 (216)
                      .....+ ...| .+|.+.+.+.+.
T Consensus       121 ~~~~~p~~~~y-~sK~~~e~~~~~  143 (321)
T 3c1o_A          121 IKPLPPFESVL-EKKRIIRRAIEA  143 (321)
T ss_dssp             CCCCHHHHHHH-HHHHHHHHHHHH
T ss_pred             cccCCCcchHH-HHHHHHHHHHHH
Confidence            111112 3478 999999888764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.41  E-value=2.6e-13  Score=114.08  Aligned_cols=117  Identities=15%  Similarity=0.065  Sum_probs=90.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++|||||+|+||.+++++|+++|+ +|+..+|+                           +|+++++++++       ++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------cC
Confidence            699999999999999999999998 77665543                           67788888876       48


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDP  191 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  191 (216)
                      |++||+||...+      ++..+.+++|+.++..+++++.+.        +.+.++|++||.....              
T Consensus        48 d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~v~~Ss~~~~~--------------   99 (369)
T 3st7_A           48 DFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILTRN--------TKKPAILLSSSIQATQ--------------   99 (369)
T ss_dssp             SEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHTTC--------SSCCEEEEEEEGGGGS--------------
T ss_pred             CEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEeCchhhcC--------------
Confidence            999999998643      223446788999999888877432        1124899999976543              


Q ss_pred             CccchHHHHHHHHHHHHHHh
Q 027991          192 SGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ...|+.+|.+.+.+++.+..
T Consensus       100 ~~~Y~~sK~~~E~~~~~~~~  119 (369)
T 3st7_A          100 DNPYGESKLQGEQLLREYAE  119 (369)
T ss_dssp             CSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHH
Confidence            44899999999988877543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.40  E-value=1.6e-12  Score=107.01  Aligned_cols=79  Identities=11%  Similarity=0.117  Sum_probs=63.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++++||||+|+||.++++.|+++|++|++++|+.+......+++.    ...+.++++|++|++++.++++       ++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----SLGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh----cCCCEEEEecCCCHHHHHHHHc-------CC
Confidence            579999999999999999999999999999998752222222232    2347889999999999888775       58


Q ss_pred             cEEEECCccC
Q 027991          112 NILINNAGIM  121 (216)
Q Consensus       112 d~li~~Ag~~  121 (216)
                      |++||+++..
T Consensus        81 d~vi~~a~~~   90 (318)
T 2r6j_A           81 DVVISALAFP   90 (318)
T ss_dssp             SEEEECCCGG
T ss_pred             CEEEECCchh
Confidence            9999999963

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.34  E-value=2.7e-12  Score=104.65  Aligned_cols=85  Identities=21%  Similarity=0.259  Sum_probs=71.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++||||+||||.++++.|+++|++|++++|+.+++++..+++....   .+.++.+|++++++++++++    
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHTT----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHH----
Confidence            45789999999999999999999999999999999999888877777765431   35678899999998877665    


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                         .+|++|||+|..
T Consensus       188 ---~~DvlVn~ag~g  199 (287)
T 1lu9_A          188 ---GAHFVFTAGAIG  199 (287)
T ss_dssp             ---TCSEEEECCCTT
T ss_pred             ---hCCEEEECCCcc
Confidence               479999999864

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.23  E-value=3e-11  Score=94.72  Aligned_cols=78  Identities=22%  Similarity=0.275  Sum_probs=61.3

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           28 DGSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        28 ~~~~k~~lItG~----------------s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      ++.||++|||||                |||||.++|+.|+++|++|+++++... ++         .|. .  .-.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~-g--~~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPP-F--VKRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCT-T--EEEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCC-C--CeEEcc
Confidence            478999999999                689999999999999999999988652 11         011 1  235688


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccC
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      ++.++   +++.+.+.++++|++|||||+.
T Consensus        72 ~~~~~---~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           72 MTALE---MEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             CSHHH---HHHHHHHHGGGCSEEEECCBCC
T ss_pred             CcHHH---HHHHHHHhcCCCCEEEECCccc
Confidence            87544   5666677788999999999985

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.22  E-value=2.5e-10  Score=92.93  Aligned_cols=136  Identities=15%  Similarity=0.074  Sum_probs=87.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|.||..++++|.++|++|+++.|+...              ..+.   .|     .+   .   .+...++|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~~---~~-----~~---~---~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRIT---WD-----EL---A---ASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEEE---HH-----HH---H---HHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ceee---cc-----hh---h---HhhccCCC
Confidence            59999999999999999999999999999997542              1121   11     11   1   12345899


Q ss_pred             EEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--CccCCCC
Q 027991          113 ILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GIRFDKI  188 (216)
Q Consensus       113 ~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~~  188 (216)
                      .+||.||..  .+....+.+....+++.|+.++-.+.+.+...-.       +...+|+.||.+. ++...  ....+.+
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~-------~~~~~i~~Ss~~v-yg~~~~~~~~E~~p  125 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQ-------PPKAWVLVTGVAY-YQPSLTAEYDEDSP  125 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSS-------CCSEEEEEEEGGG-SCCCSSCCBCTTCC
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCC-------CceEEEEEeeeee-ecCCCCCcccccCC
Confidence            999999853  3334456777788899999888777766544311       2334555555443 33322  2223444


Q ss_pred             CCCCccchHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLL  204 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~  204 (216)
                      ..+...|+.+|...+.
T Consensus       126 ~~~~~~~~~~~~~~e~  141 (298)
T 4b4o_A          126 GGDFDFFSNLVTKWEA  141 (298)
T ss_dssp             CSCSSHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHH
Confidence            5555566666665554

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.14  E-value=5e-11  Score=98.88  Aligned_cols=156  Identities=12%  Similarity=-0.064  Sum_probs=99.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCC--cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .+++||||+|+||..++..|+.+|.       +|++.++..  ++.+.....+...  .  +.+. .|+++.+++.+.+ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~--~~~~-~di~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--A--FPLL-AGLEATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--T--CTTE-EEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--c--cccc-CCeEeccChHHHh-
Confidence            4799999999999999999999996       899999874  2222222233221  1  1122 4666544444433 


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                            .+.|++||.||......    +...+.+++|+.++..+++++.++- +      ..++++++|+..........
T Consensus        79 ------~~~D~Vih~Ag~~~~~~----~~~~~~~~~Nv~~t~~l~~a~~~~~-~------~~~~vvv~snp~~~~~~~~~  141 (327)
T 1y7t_A           79 ------KDADYALLVGAAPRKAG----MERRDLLQVNGKIFTEQGRALAEVA-K------KDVKVLVVGNPANTNALIAY  141 (327)
T ss_dssp             ------TTCSEEEECCCCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHS-C------TTCEEEECSSSHHHHHHHHH
T ss_pred             ------CCCCEEEECCCcCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhc-C------CCeEEEEeCCchhhhHHHHH
Confidence                  26899999999864321    2345689999999999999887762 0      24578888875422111000


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                       .+.....+...|+.+|...+.+...+..
T Consensus       142 -~~~~~~~p~~~yg~tkl~~er~~~~~a~  169 (327)
T 1y7t_A          142 -KNAPGLNPRNFTAMTRLDHNRAKAQLAK  169 (327)
T ss_dssp             -HTCTTSCGGGEEECCHHHHHHHHHHHHH
T ss_pred             -HHcCCCChhheeccchHHHHHHHHHHHH
Confidence             0111233555799999988877766653

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.01  E-value=2e-10  Score=90.27  Aligned_cols=78  Identities=15%  Similarity=0.235  Sum_probs=58.1

Q ss_pred             CCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           30 SGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        30 ~~k~~lItG~----------------s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      +||++|||||                ||++|.++|+.++++|++|++++|......        .. ...+  ...|++ 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~-~~~~--~~~~v~-   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EP-HPNL--SIREIT-   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CC-CTTE--EEEECC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cC-CCCe--EEEEHh-
Confidence            5899999999                788999999999999999999998754211        00 1122  223444 


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccC
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                        +..++++.+.+.++++|++|+||++.
T Consensus        70 --s~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           70 --NTKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             --SHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             --HHHHHHHHHHHhcCCCCEEEEcCccc
Confidence              45566677777778999999999975

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.96  E-value=1.1e-09  Score=81.41  Aligned_cols=77  Identities=13%  Similarity=0.176  Sum_probs=63.4

Q ss_pred             CchHHHHHHHHHHcCCeEEEEEcCCcchH---HHHHHHHhhcCCCeEEEEEccCCCH--HHHHHHHHHHHhhcCCccEEE
Q 027991           41 SGIGTETARVLALRGVHVVMGVRDIAAGK---DVKETIVKEIPSAKVDAMELDLSSL--ASVRNFASEYNIQHHQLNILI  115 (216)
Q Consensus        41 ~giG~~~a~~l~~~g~~Vi~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~~~id~li  115 (216)
                      +-++.++++.|+++|++|++.+|+.+...   +..+.+...  +.+...+++|++++  ++++++++.+.+.+|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45789999999999999999988765432   234444433  66788899999999  9999999999998999 9999


Q ss_pred             ECCcc
Q 027991          116 NNAGI  120 (216)
Q Consensus       116 ~~Ag~  120 (216)
                      ||||.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99996

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.96  E-value=2.9e-09  Score=74.41  Aligned_cols=74  Identities=22%  Similarity=0.223  Sum_probs=60.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +++++|+|+ |++|..+++.|.++| ++|++++|+.++.+...        ...+.++.+|+++.+.+.++++       
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~-------   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALG-------   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHc-------
Confidence            468999999 999999999999999 89999999876654432        2345678899999888777653       


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|++++.
T Consensus        69 ~~d~vi~~~~~   79 (118)
T 3ic5_A           69 GFDAVISAAPF   79 (118)
T ss_dssp             TCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            68999999964

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.88  E-value=1.1e-08  Score=87.32  Aligned_cols=83  Identities=19%  Similarity=0.332  Sum_probs=70.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC---CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++++|+|+ |+||..+++.|+++|   .+|++.+|+.+++++..+++.... +.++..+.+|++|.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            57899998 899999999999998   389999999998888877776432 246788999999999999999875    


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                       ++|++||+++..
T Consensus        76 -~~DvVin~ag~~   87 (405)
T 4ina_A           76 -KPQIVLNIALPY   87 (405)
T ss_dssp             -CCSEEEECSCGG
T ss_pred             -CCCEEEECCCcc
Confidence             689999999853

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.88  E-value=4.8e-09  Score=80.40  Aligned_cols=103  Identities=13%  Similarity=0.205  Sum_probs=71.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|+||+||||.++++.+...|++|++++++.++.+..    .. . +...   .+|.++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~-~-g~~~---~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SR-L-GVEY---VGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HT-T-CCSE---EEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c-CCCE---EeeCCcHHHHHHHHHHhC--CC
Confidence            578999999999999999999999999999999986654332    22 2 2221   247776554444433221  13


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      ++|++|+|+|.         +               ..+.+++.++       ++|++|++++..
T Consensus       107 ~~D~vi~~~g~---------~---------------~~~~~~~~l~-------~~G~~v~~g~~~  140 (198)
T 1pqw_A          107 GVDVVLNSLAG---------E---------------AIQRGVQILA-------PGGRFIELGKKD  140 (198)
T ss_dssp             CEEEEEECCCT---------H---------------HHHHHHHTEE-------EEEEEEECSCGG
T ss_pred             CCeEEEECCch---------H---------------HHHHHHHHhc-------cCCEEEEEcCCC
Confidence            69999999973         0               1344555555       478999998754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.75  E-value=1.8e-08  Score=83.45  Aligned_cols=79  Identities=16%  Similarity=0.266  Sum_probs=60.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|+|++||||..+++.+...|++|++++++.++.+.+ +++     +..   ..+|.++.+++.+.+.++..  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHhC--C
Confidence            578999999999999999999999999999999987665543 222     222   23477774455556655543  5


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|++|+|+|
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            8999999999

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.70  E-value=2.2e-08  Score=84.32  Aligned_cols=108  Identities=16%  Similarity=0.214  Sum_probs=74.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.+++++|+|+ |+||..+++.+...|++|++++|+.++++...+.    . +..   +.+|.++.+++.+++.     
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~----~-g~~---~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV----F-GGR---VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----T-TTS---EEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----c-Cce---EEEecCCHHHHHHHHh-----
Confidence            477899999999 9999999999999999999999997765544322    2 222   4567788877776664     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                        +.|++|++++.....                 .+..+.+.+++.|+       ++|.||++++..+
T Consensus       229 --~~DvVi~~~g~~~~~-----------------~~~li~~~~l~~mk-------~gg~iV~v~~~~g  270 (369)
T 2eez_A          229 --HADLLIGAVLVPGAK-----------------APKLVTRDMLSLMK-------EGAVIVDVAVDQG  270 (369)
T ss_dssp             --HCSEEEECCC------------------------CCSCHHHHTTSC-------TTCEEEECC----
T ss_pred             --CCCEEEECCCCCccc-----------------cchhHHHHHHHhhc-------CCCEEEEEecCCC
Confidence              579999999974210                 01223456666775       4789999998654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.70  E-value=2.4e-08  Score=86.17  Aligned_cols=79  Identities=15%  Similarity=0.246  Sum_probs=61.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |++|+++|+| +|++|.++++.|++.|++|++++|+.+++++..    ..+  ..+..+.+|++|.+++.++++      
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la----~~~--~~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLS----AGV--QHSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTT----TTC--TTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHH----Hhc--CCceEEEeecCCHHHHHHHHc------
Confidence            3578899997 799999999999999999999999876544322    222  136788899999988877664      


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                       ++|++||+++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             689999999863

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.64  E-value=1.7e-08  Score=82.09  Aligned_cols=81  Identities=19%  Similarity=0.297  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++++|+++|||++ |+|.++++.|+++| +|++++|+.+++++..+++....... . .+.+|+++.          .+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~-~~~~d~~~~----------~~  189 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEECT----------TC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-c-ceeEEEeeH----------HH
Confidence            35789999999996 99999999999999 99999999888777777665431001 0 122344441          34


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                      .++++|++|||+|..
T Consensus       190 ~~~~~DilVn~ag~~  204 (287)
T 1nvt_A          190 DLDGVDIIINATPIG  204 (287)
T ss_dssp             CCTTCCEEEECSCTT
T ss_pred             hhCCCCEEEECCCCC
Confidence            567899999999975

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.59  E-value=1.5e-07  Score=78.28  Aligned_cols=104  Identities=13%  Similarity=0.102  Sum_probs=74.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|++|+||..+++.+...|++|++++++.++.+.+. +    . +..   ...|.++.+++.+.+.++...  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~----~-g~~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S----I-GGE---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H----T-TCC---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H----c-CCc---eEEecCccHhHHHHHHHHhCC--
Confidence            5789999999999999999999999999999999877654322 2    2 222   224887656666666665543  


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      ++|++|+++|..        +               .++.+++.++       ++|+++++++..
T Consensus       238 ~~D~vi~~~g~~--------~---------------~~~~~~~~l~-------~~G~iv~~g~~~  272 (347)
T 2hcy_A          238 GAHGVINVSVSE--------A---------------AIEASTRYVR-------ANGTTVLVGMPA  272 (347)
T ss_dssp             CEEEEEECSSCH--------H---------------HHHHHTTSEE-------EEEEEEECCCCT
T ss_pred             CCCEEEECCCcH--------H---------------HHHHHHHHHh-------cCCEEEEEeCCC
Confidence            799999999841        0               2344455554       368999888754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.56  E-value=7.8e-11  Score=101.72  Aligned_cols=44  Identities=23%  Similarity=0.283  Sum_probs=38.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      ..+.||+++|||++ +||.++|+.|...|++|++++++......+
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A  304 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA  304 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            45899999999986 999999999999999999999987654443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.55  E-value=6.4e-07  Score=73.65  Aligned_cols=84  Identities=25%  Similarity=0.309  Sum_probs=65.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC---CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ..++++|+++|+|+ ||+|.+++..|++.|+ +|++++|+   .+++++..+++.... +.  .+...++.+.+++.+.+
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~~--~~~~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-DC--KAQLFDIEDHEQLRKEI  224 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SC--EEEEEETTCHHHHHHHH
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-CC--ceEEeccchHHHHHhhh
Confidence            35688999999998 7999999999999998 89999999   777788777777654 22  23345677766665544


Q ss_pred             HHHHhhcCCccEEEECCcc
Q 027991          102 SEYNIQHHQLNILINNAGI  120 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~  120 (216)
                      .       ..|++||+...
T Consensus       225 ~-------~aDiIINaTp~  236 (315)
T 3tnl_A          225 A-------ESVIFTNATGV  236 (315)
T ss_dssp             H-------TCSEEEECSST
T ss_pred             c-------CCCEEEECccC
Confidence            3       57999998754

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.54  E-value=1.1e-07  Score=79.10  Aligned_cols=81  Identities=15%  Similarity=0.167  Sum_probs=59.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|++|+||..+++.+...|++|++++++.++.+.+.+    +. +...   ..|.++.+++.+.+.++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~~-g~~~---~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT----KF-GFDD---AFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TS-CCSE---EEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----Hc-CCce---EEecCCHHHHHHHHHHHhC--C
Confidence            57899999999999999999999999999999998766544322    22 2221   2376665445555555432  5


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+|+|.
T Consensus       225 ~~d~vi~~~g~  235 (345)
T 2j3h_A          225 GIDIYFENVGG  235 (345)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCH
Confidence            79999999983

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.54  E-value=1e-08  Score=90.22  Aligned_cols=98  Identities=20%  Similarity=0.207  Sum_probs=63.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+++|+++|||| ||+|.++++.|+++|++|++++|+.+++++..+++     +.++.    ++.+   +.++      .
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~d---l~~~------~  421 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTD---LDNY------H  421 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTT---TTTC-------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHH---hhhc------c
Confidence            467899999999 59999999999999999999999987776655544     11211    2222   1000      1


Q ss_pred             cCCccEEEECCccCC-------CCCCCChHHHHHHHHHHHhHHH
Q 027991          108 HHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHF  144 (216)
Q Consensus       108 ~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~N~~~~~  144 (216)
                      .+.+|++|||+|+..       +..+...+++..++++|+.+..
T Consensus       422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            235899999999742       2233456667778899887653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.50  E-value=2.5e-07  Score=80.12  Aligned_cols=81  Identities=14%  Similarity=0.226  Sum_probs=61.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ...+++++++|+|+ |++|.++++.|++. |++|++++|+.+++++..+    .   ..+..+.+|++|.+++.++++  
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~----~---~~~~~~~~D~~d~~~l~~~l~--   87 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAK----P---SGSKAISLDVTDDSALDKVLA--   87 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHG----G---GTCEEEECCTTCHHHHHHHHH--
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH----h---cCCcEEEEecCCHHHHHHHHc--
Confidence            34567789999997 99999999999998 6799999999776554432    2   124567899999888877664  


Q ss_pred             HhhcCCccEEEECCccC
Q 027991          105 NIQHHQLNILINNAGIM  121 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~  121 (216)
                           ++|+|||+++..
T Consensus        88 -----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -----DNDVVISLIPYT   99 (467)
T ss_dssp             -----TSSEEEECSCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 689999999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.49  E-value=2.9e-07  Score=75.86  Aligned_cols=104  Identities=11%  Similarity=0.139  Sum_probs=71.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+||+||||..+++.+...|++|++++++.++.+.+.+ +     +...   .+|.++++..+++.+...  .+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~~---~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAWQ---VINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEECCCccHHHHHHHHhC--CC
Confidence            57899999999999999999999999999999998766554432 2     2222   246666554444433321  13


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++|++|+|+|..                        ..+.+++.++       ++|+++.+++..+
T Consensus       209 ~~D~vi~~~g~~------------------------~~~~~~~~l~-------~~G~iv~~g~~~~  243 (327)
T 1qor_A          209 KVRVVYDSVGRD------------------------TWERSLDCLQ-------RRGLMVSFGNSSG  243 (327)
T ss_dssp             CEEEEEECSCGG------------------------GHHHHHHTEE-------EEEEEEECCCTTC
T ss_pred             CceEEEECCchH------------------------HHHHHHHHhc-------CCCEEEEEecCCC
Confidence            699999999921                        1244455554       3689999887544

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.48  E-value=4.5e-07  Score=74.94  Aligned_cols=80  Identities=11%  Similarity=0.172  Sum_probs=57.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++++|+||+||||..+++.+...|++|++++++.++.+.+.+ +     +...   ..|.++.+..+++.+...  ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-----g~~~---~~d~~~~~~~~~i~~~~~--~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-----GCHH---TINYSTQDFAEVVREITG--GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEECCCHHHHHHHHHHhC--CC
Confidence            57899999999999999999999999999999999766554422 2     2221   246666544444433321  13


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            79999999994

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.47  E-value=1.9e-07  Score=67.16  Aligned_cols=77  Identities=12%  Similarity=0.047  Sum_probs=56.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++++++|+|+ |++|..+++.|.+.|++|++++++.++.+.    +..    .....+..|.++.+.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~----~~~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YAS----YATHAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTT----TCSEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH----hCCEEEEeCCCCHHHHHhc------CC
Confidence            45678999998 999999999999999999999998654332    111    1235677899987665433      23


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .+.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            468999999885

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.47  E-value=4.6e-07  Score=65.41  Aligned_cols=75  Identities=17%  Similarity=0.178  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++++|+|+ |.+|..+++.|.++|++|++++++++..+...    ..    ...++.+|.++++.++++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~~----~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----DE----GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT----TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----HC----CCcEEECCCCCHHHHHhC------Ccc
Confidence            3467999998 88999999999999999999999876654433    22    256788999999877654      234


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      +.|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            6899998776

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.43  E-value=4.3e-07  Score=75.83  Aligned_cols=80  Identities=13%  Similarity=0.144  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|+||+||||..+++.+...|++|++++++.++.+.+ +++     +..   ..+|.++.+..+++.+.. . .+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATLKFT-K-GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHHHHT-T-TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHHHHh-c-CC
Confidence            578999999999999999999999999999999987765544 222     222   224666644443333221 1 13


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999994

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.43  E-value=3.6e-07  Score=76.26  Aligned_cols=79  Identities=18%  Similarity=0.208  Sum_probs=56.3

Q ss_pred             CC--CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           30 SG--LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~--k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .|  +++||+|++||||..+++.+...|+ +|++++++.++.+.+.+    ++ +..   ..+|.++.+ +.+.+.+...
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~----~~-g~~---~~~d~~~~~-~~~~~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS----EL-GFD---AAINYKKDN-VAEQLRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TS-CCS---EEEETTTSC-HHHHHHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH----Hc-CCc---eEEecCchH-HHHHHHHhcC
Confidence            46  8999999999999999999999999 99999998765544332    22 222   234666643 3333333322


Q ss_pred             hcCCccEEEECCc
Q 027991          107 QHHQLNILINNAG  119 (216)
Q Consensus       107 ~~~~id~li~~Ag  119 (216)
                        +++|++|+|+|
T Consensus       229 --~~~d~vi~~~G  239 (357)
T 2zb4_A          229 --AGVDVYFDNVG  239 (357)
T ss_dssp             --TCEEEEEESCC
T ss_pred             --CCCCEEEECCC
Confidence              27999999999

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.41  E-value=5.8e-07  Score=74.36  Aligned_cols=80  Identities=16%  Similarity=0.241  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|++|+||..+++.+...|++|++++++.++.+.+.++    + +...   ..|.++++..+ .+.+..  .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----~-g~~~---~~~~~~~~~~~-~~~~~~--~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE----L-GFDG---AIDYKNEDLAA-GLKREC--PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----T-CCSE---EEETTTSCHHH-HHHHHC--TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----c-CCCE---EEECCCHHHHH-HHHHhc--CC
Confidence            578999999999999999999999999999999987765544222    2 2221   24666544333 333332  24


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+|+|.
T Consensus       218 ~~d~vi~~~g~  228 (336)
T 4b7c_A          218 GIDVFFDNVGG  228 (336)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            79999999984

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.40  E-value=1.1e-06  Score=75.60  Aligned_cols=109  Identities=16%  Similarity=0.222  Sum_probs=72.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEE--ccCC---------CHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LDLS---------SLASVR   98 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~Dv~---------~~~~~~   98 (216)
                      .|+++||+|++|+||...++.+...|++|++++++.++.+.+.     ++ +....+-.  .|+.         +.++++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-----~l-Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-----AL-GCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HT-TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----hc-CCCEEEecccccccccccccccccchhhh
Confidence            5789999999999999999999999999999998876654432     22 22222111  2222         123444


Q ss_pred             HHHHHHHhhcC-CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991           99 NFASEYNIQHH-QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus        99 ~~~~~~~~~~~-~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++.+++.+..+ ++|++|+++|..                        ..+.+++.++       ++|+|+++++..+
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~~------------------------~~~~~~~~l~-------~~G~iv~~G~~~~  340 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGRV------------------------TFGLSVIVAR-------RGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCHH------------------------HHHHHHHHSC-------TTCEEEESCCTTC
T ss_pred             HHHHHHHHHhCCCceEEEECCCch------------------------HHHHHHHHHh-------cCCEEEEEecCCC
Confidence            45555554433 699999999941                        1134455554       4799999987654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.38  E-value=1.6e-06  Score=72.04  Aligned_cols=104  Identities=13%  Similarity=0.167  Sum_probs=71.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++     +...   .+|.++++ +.+.+.+... ..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~~-~~~~~~~~~~-~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHPD-WPKEVRRLTG-GK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTSTT-HHHHHHHHTT-TT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCccc-HHHHHHHHhC-CC
Confidence            5789999999999999999999999999999999877655442 22     2222   24766643 3333333321 24


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++|++|+++| ..                       ..+.+++.++       +.|+++.+++..+
T Consensus       235 ~~d~vi~~~g-~~-----------------------~~~~~~~~l~-------~~G~~v~~g~~~~  269 (343)
T 2eih_A          235 GADKVVDHTG-AL-----------------------YFEGVIKATA-------NGGRIAIAGASSG  269 (343)
T ss_dssp             CEEEEEESSC-SS-----------------------SHHHHHHHEE-------EEEEEEESSCCCS
T ss_pred             CceEEEECCC-HH-----------------------HHHHHHHhhc-------cCCEEEEEecCCC
Confidence            7999999999 21                       1244455554       3689999887544

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.36  E-value=1.3e-05  Score=66.25  Aligned_cols=120  Identities=17%  Similarity=0.129  Sum_probs=76.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++||||+|.+|..++..|+.+|  .+|++.+++++  +....++.......++..    +++.++..+.++       
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT-------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC-------
Confidence            479999999999999999999999  78999998765  222333433211112222    223344444443       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      +.|++|++||....... +.   .+.+..|+.....+++.+.++-        +.+.|+++|.....
T Consensus        76 gaDvVi~~ag~~~~~g~-~r---~dl~~~N~~~~~~i~~~i~~~~--------p~~~viv~SNPv~~  130 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPGM-TR---DDLFKINAGIVKTLCEGIAKCC--------PRAIVNLISNPVNS  130 (326)
T ss_dssp             TCSEEEECCCCCCCSSC-CC---SHHHHHHHHHHHHHHHHHHHHC--------TTSEEEECCSSHHH
T ss_pred             CCCEEEEcCCcCCCCCC-CH---HHHHHHHHHHHHHHHHHHHhhC--------CCeEEEEECCchHH
Confidence            68999999997542221 22   2457788888888887777653        24455555444333

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.36  E-value=6.7e-07  Score=72.04  Aligned_cols=77  Identities=16%  Similarity=0.280  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++|+|+ ||+|.++++.|++.|++|++++|+.+++++..+++...  + .+  ...|+   +++       .+
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~--~~~~~---~~~-------~~  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SI--QALSM---DEL-------EG  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SE--EECCS---GGG-------TT
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Ce--eEecH---HHh-------cc
Confidence            4578999999998 79999999999999999999999988777766655321  1 22  12333   111       11


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                        +++|++||+++..
T Consensus       179 --~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 --HEFDLIINATSSG  191 (271)
T ss_dssp             --CCCSEEEECCSCG
T ss_pred             --CCCCEEEECCCCC
Confidence              5899999999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.35  E-value=9.2e-07  Score=73.77  Aligned_cols=80  Identities=15%  Similarity=0.217  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|+|++||||..+++.+...|++|+++++++++.+.+ +    +. +..   ..+|.++++..+++.+.. . .+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~----~~-ga~---~~~d~~~~~~~~~~~~~~-~-~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-L----QN-GAH---EVFNHREVNYIDKIKKYV-G-EK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H----HT-TCS---EEEETTSTTHHHHHHHHH-C-TT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-H----Hc-CCC---EEEeCCCchHHHHHHHHc-C-CC
Confidence            578999999999999999999999999999999987665532 2    22 222   224666654443333322 1 23


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+|+|.
T Consensus       239 ~~D~vi~~~G~  249 (351)
T 1yb5_A          239 GIDIIIEMLAN  249 (351)
T ss_dssp             CEEEEEESCHH
T ss_pred             CcEEEEECCCh
Confidence            79999999983

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.30  E-value=2e-06  Score=71.25  Aligned_cols=122  Identities=11%  Similarity=-0.036  Sum_probs=80.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcC----CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRD----IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      ..+++||||+|++|..++..|+.+|.       +|++.+++    .++++.....+....  ..+.   .|+....+..+
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~~---~~i~~~~~~~~   79 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPLL---AGMTAHADPMT   79 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTTE---EEEEEESSHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--cccc---CcEEEecCcHH
Confidence            35799999999999999999999885       79999988    544544444454321  0111   24433233333


Q ss_pred             HHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          100 FASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      .+       .+.|++||.||...... .+   -.+.+..|+.....+++.+.++-.       +.++||++|+-..
T Consensus        80 al-------~~aD~Vi~~ag~~~~~g-~~---r~dl~~~N~~i~~~i~~~i~~~~~-------p~a~ii~~SNPv~  137 (329)
T 1b8p_A           80 AF-------KDADVALLVGARPRGPG-ME---RKDLLEANAQIFTVQGKAIDAVAS-------RNIKVLVVGNPAN  137 (329)
T ss_dssp             HT-------TTCSEEEECCCCCCCTT-CC---HHHHHHHHHHHHHHHHHHHHHHSC-------TTCEEEECSSSHH
T ss_pred             Hh-------CCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHHhcC-------CCeEEEEccCchH
Confidence            33       26899999999854322 12   235678888888888887776631       2468999987443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.29  E-value=2.1e-06  Score=71.32  Aligned_cols=80  Identities=16%  Similarity=0.162  Sum_probs=56.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++++||+|++|+||..+++.+... |++|+++++++++.+.+. ++     +...   ..|.++.+..++ +.++... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~-----g~~~---~~~~~~~~~~~~-~~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GADY---VINASMQDPLAE-IRRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHH-HHHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCCE---EecCCCccHHHH-HHHHhcC-
Confidence            5789999999999999999999999 999999999877655442 22     2222   235555433322 3332221 


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|+++|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            489999999994

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.28  E-value=2.6e-06  Score=69.09  Aligned_cols=81  Identities=16%  Similarity=0.268  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++++|+++|+|+ ||+|.+++..|++.|+ +|++++|+.+++++..+++....+...+.  ..+..+   +.+.+.   
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~~---l~~~l~---  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARG---IEDVIA---  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECSTT---HHHHHH---
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHHH---HHHHHh---
Confidence            3578999999998 8999999999999998 79999999999988888887765443333  334333   333333   


Q ss_pred             hhcCCccEEEECCcc
Q 027991          106 IQHHQLNILINNAGI  120 (216)
Q Consensus       106 ~~~~~id~li~~Ag~  120 (216)
                          ..|++||+...
T Consensus       194 ----~~DiVInaTp~  204 (283)
T 3jyo_A          194 ----AADGVVNATPM  204 (283)
T ss_dssp             ----HSSEEEECSST
T ss_pred             ----cCCEEEECCCC
Confidence                46999998754

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.25  E-value=5.7e-06  Score=60.55  Aligned_cols=79  Identities=15%  Similarity=0.097  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++.++|.|+ |.+|..+++.|.++|++|++++++. ++.+...+..     ...+.++..|.++++.++++      ..
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc------Ch
Confidence            4567889986 9999999999999999999999974 4333333221     23467889999998876553      12


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .+.|.+|.+.+.
T Consensus        70 ~~ad~vi~~~~~   81 (153)
T 1id1_A           70 DRCRAILALSDN   81 (153)
T ss_dssp             TTCSEEEECSSC
T ss_pred             hhCCEEEEecCC
Confidence            367999988763

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.24  E-value=1.3e-06  Score=73.13  Aligned_cols=100  Identities=14%  Similarity=0.130  Sum_probs=67.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC---cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ++|+++||+|+ |++|..+++.+...|++|++++++.   ++.+.+ +++     +.  ..+  | ++  ++.+.+.+ .
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-----ga--~~v--~-~~--~~~~~~~~-~  243 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-----KT--NYY--N-SS--NGYDKLKD-S  243 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-----TC--EEE--E-CT--TCSHHHHH-H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-----CC--cee--c-hH--HHHHHHHH-h
Confidence            45899999999 9999999999999999999999987   554322 222     32  222  5 44  22222322 2


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHH-HHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT-NLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~-~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                       . +++|++|+++|...                       .+ +.+++.++       ++|+|++++...+
T Consensus       244 -~-~~~d~vid~~g~~~-----------------------~~~~~~~~~l~-------~~G~iv~~g~~~~  282 (366)
T 2cdc_A          244 -V-GKFDVIIDATGADV-----------------------NILGNVIPLLG-------RNGVLGLFGFSTS  282 (366)
T ss_dssp             -H-CCEEEEEECCCCCT-----------------------HHHHHHGGGEE-------EEEEEEECSCCCS
T ss_pred             -C-CCCCEEEECCCChH-----------------------HHHHHHHHHHh-------cCCEEEEEecCCC
Confidence             2 58999999999521                       22 45555554       3689999886543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.23  E-value=1.4e-05  Score=66.37  Aligned_cols=103  Identities=16%  Similarity=0.085  Sum_probs=68.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +++++|+||+|+||...++.+...|++|++++++.++.+.+. ++     +...   ..|..+++ +.+.+.+.... .+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~-~~~~v~~~~~~-~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAAH---VLNEKAPD-FEATLREVMKA-EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCSE---EEETTSTT-HHHHHHHHHHH-HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEECCcHH-HHHHHHHHhcC-CC
Confidence            489999999999999999999999999999999888765443 22     2222   13444433 22233332211 27


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +|++|+++|..                        .++.+++.++       ++|+++.+++..+
T Consensus       234 ~D~vid~~g~~------------------------~~~~~~~~l~-------~~G~iv~~G~~~~  267 (349)
T 3pi7_A          234 PRIFLDAVTGP------------------------LASAIFNAMP-------KRARWIIYGRLDP  267 (349)
T ss_dssp             CCEEEESSCHH------------------------HHHHHHHHSC-------TTCEEEECCCSCC
T ss_pred             CcEEEECCCCh------------------------hHHHHHhhhc-------CCCEEEEEeccCC
Confidence            99999999851                        1133445554       4799999986543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.22  E-value=3.2e-06  Score=70.48  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+||+|+||..+++.+...|++|++++++.++.+.+.+ +     +...   ..|.++++..+. +.+..  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---~~~~~~~~~~~~-~~~~~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L-----GAKR---GINYRSEDFAAV-IKAET--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHH-HHHHH--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCCE---EEeCCchHHHHH-HHHHh--CC
Confidence            57899999999999999999999999999999999877654432 2     2222   135555433333 33332  45


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+++|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999994

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.19  E-value=1.2e-05  Score=66.00  Aligned_cols=84  Identities=20%  Similarity=0.299  Sum_probs=61.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC---CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD---IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ..++++|+++|+|+ ||.|.+++..|++.|+ +|+++.|+   .+++++..+++.... +..+  ...+..+.+...+.+
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v--~~~~~~~l~~~~~~l  218 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVV--TVTDLADQHAFTEAL  218 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCEE--EEEETTCHHHHHHHH
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-Ccce--EEechHhhhhhHhhc
Confidence            35678999999997 8999999999999998 89999999   777787777776654 2223  334555543333333


Q ss_pred             HHHHhhcCCccEEEECCcc
Q 027991          102 SEYNIQHHQLNILINNAGI  120 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~  120 (216)
                      .       ..|++||+...
T Consensus       219 ~-------~~DiIINaTp~  230 (312)
T 3t4e_A          219 A-------SADILTNGTKV  230 (312)
T ss_dssp             H-------HCSEEEECSST
T ss_pred             c-------CceEEEECCcC
Confidence            3       46999998665

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.18  E-value=5.8e-06  Score=69.14  Aligned_cols=103  Identities=16%  Similarity=0.236  Sum_probs=69.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+||+|++|..+++.+...|++|++++++.++.+.+.+     . +... .  .|.+++ ++.+.+.+..  .+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----~-Ga~~-~--~~~~~~-~~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-----L-GCDR-P--INYKTE-PVGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----T-TCSE-E--EETTTS-CHHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----c-CCcE-E--EecCCh-hHHHHHHHhc--CC
Confidence            57899999999999999999999999999999998766544322     2 3222 1  244442 2333333332  24


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++|++|+++|.         +               ..+.+++.++       +.|+++.+++..+
T Consensus       231 g~D~vid~~g~---------~---------------~~~~~~~~l~-------~~G~iv~~g~~~~  265 (362)
T 2c0c_A          231 GVDVVYESVGG---------A---------------MFDLAVDALA-------TKGRLIVIGFISG  265 (362)
T ss_dssp             CEEEEEECSCT---------H---------------HHHHHHHHEE-------EEEEEEECCCGGG
T ss_pred             CCCEEEECCCH---------H---------------HHHHHHHHHh-------cCCEEEEEeCCCC
Confidence            79999999983         0               1234555555       3689999887543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.12  E-value=1.2e-05  Score=63.80  Aligned_cols=83  Identities=13%  Similarity=0.276  Sum_probs=65.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++++|.|+ ||+|..+++.|+..|. +|.+++++.                   .+.+.+.+.+....|..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            356789999997 8999999999999997 899999887                   7788888888887777777777


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ..++++ +.+.++++       ..|++|.+..
T Consensus       107 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             eccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            777764 34444433       5799998865

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.09  E-value=1.1e-05  Score=67.50  Aligned_cols=100  Identities=15%  Similarity=0.186  Sum_probs=69.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|+ |++|...++.+...|++|++++++.++.+.+.+    ++ +...   ..|..+.+.+.+       ..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~l-Ga~~---v~~~~~~~~~~~-------~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK----NF-GADS---FLVSRDQEQMQA-------AAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH----TS-CCSE---EEETTCHHHHHH-------TTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hc-CCce---EEeccCHHHHHH-------hhC
Confidence            6889999996 999999999999999999999998877654432    22 2221   236666543332       224


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++|++|+++|...                       .++.+++.++       +.|+++++++..+
T Consensus       251 ~~D~vid~~g~~~-----------------------~~~~~~~~l~-------~~G~iv~~g~~~~  286 (366)
T 1yqd_A          251 TLDGIIDTVSAVH-----------------------PLLPLFGLLK-------SHGKLILVGAPEK  286 (366)
T ss_dssp             CEEEEEECCSSCC-----------------------CSHHHHHHEE-------EEEEEEECCCCSS
T ss_pred             CCCEEEECCCcHH-----------------------HHHHHHHHHh-------cCCEEEEEccCCC
Confidence            7999999998631                       1233455554       3789999987543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.09  E-value=1.2e-05  Score=66.49  Aligned_cols=80  Identities=15%  Similarity=0.129  Sum_probs=56.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|++++||...++.+...|++|++++++.++.+.+.+ +     +...   ..|.++.+..+ .+.+... ..
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~---~~~~~~~~~~~-~~~~~~~-~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAY---VIDTSTAPLYE-TVMELTN-GI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEETTTSCHHH-HHHHHTT-TS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcE---EEeCCcccHHH-HHHHHhC-CC
Confidence            57899999999999999999999999999999999887665433 2     2222   13555433332 2222221 23


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+++|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            79999999985

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.07  E-value=1.4e-05  Score=66.10  Aligned_cols=102  Identities=15%  Similarity=0.102  Sum_probs=69.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|+ |++|..+++.+...|++|++++++.++.+.+.     ++ +...   ..|.++++ +.+.+.++.   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----~l-Ga~~---~~d~~~~~-~~~~~~~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-----EL-GADL---VVNPLKED-AAKFMKEKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----HT-TCSE---EECTTTSC-HHHHHHHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HC-CCCE---EecCCCcc-HHHHHHHHh---C
Confidence            5789999999 88999999999999999999999877655432     22 2221   24666543 333333332   5


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++|++|+++|..        +               ..+.+++.++       ++|+++.+++..+
T Consensus       230 ~~d~vid~~g~~--------~---------------~~~~~~~~l~-------~~G~~v~~g~~~~  265 (339)
T 1rjw_A          230 GVHAAVVTAVSK--------P---------------AFQSAYNSIR-------RGGACVLVGLPPE  265 (339)
T ss_dssp             SEEEEEESSCCH--------H---------------HHHHHHHHEE-------EEEEEEECCCCSS
T ss_pred             CCCEEEECCCCH--------H---------------HHHHHHHHhh-------cCCEEEEecccCC
Confidence            899999999841        1               2345556655       3689999886543

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=98.07  E-value=3.4e-05  Score=62.65  Aligned_cols=91  Identities=12%  Similarity=0.271  Sum_probs=73.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC------------------cchHHHHHHHHhhcCCCeEEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI------------------AAGKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|...                  .+.+.+.+.+.+..|..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            467789999987 9999999999999996 899998765                  67788888888888888899988


Q ss_pred             ccCCCHHHHHHHHHHHHhh----cCCccEEEECCc
Q 027991           89 LDLSSLASVRNFASEYNIQ----HHQLNILINNAG  119 (216)
Q Consensus        89 ~Dv~~~~~~~~~~~~~~~~----~~~id~li~~Ag  119 (216)
                      .++++.+.++++++.+...    ..+.|++|.+..
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            8998877777777654321    136799987654

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.06  E-value=6.5e-05  Score=61.62  Aligned_cols=107  Identities=16%  Similarity=0.118  Sum_probs=67.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEc--CCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVR--DIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r--~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++||||+|++|..++..|+.+|.  ++.+.++  +.++++.....+....+  +..+.+...|  |  ++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHH-------
Confidence            689999999999999999999884  6888888  65444433333332211  1122222211  1  1111       


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHH
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM  154 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  154 (216)
                      .+.+.|++||.||...... .+   -.+.+..|+.....+++.+.++-
T Consensus        71 al~gaD~Vi~~Ag~~~~~g-~~---r~dl~~~N~~i~~~i~~~i~~~~  114 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEG-MS---RMDLAKTNAKIVGKYAKKIAEIC  114 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HhCCCCEEEECCCCCCCCC-Cc---HHHHHHHHHHHHHHHHHHHHHhC
Confidence            2237899999999853222 12   24568889988888888887763

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.05  E-value=7e-06  Score=67.77  Aligned_cols=104  Identities=16%  Similarity=0.236  Sum_probs=69.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+||+|+||...++.+...|++|++++++.++.+.+.     +. +...   ..|.++++..+++ .+... ..
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----~~-ga~~---~~~~~~~~~~~~~-~~~~~-~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-----EY-GAEY---LINASKEDILRQV-LKFTN-GK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HT-TCSE---EEETTTSCHHHHH-HHHTT-TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----Hc-CCcE---EEeCCCchHHHHH-HHHhC-CC
Confidence            5789999999999999999999999999999999877655332     22 2222   2355443333322 22221 23


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++|++|+++|..                        ..+.+++.++       ++|+++.++...+
T Consensus       217 g~D~vid~~g~~------------------------~~~~~~~~l~-------~~G~iv~~G~~~~  251 (334)
T 3qwb_A          217 GVDASFDSVGKD------------------------TFEISLAALK-------RKGVFVSFGNASG  251 (334)
T ss_dssp             CEEEEEECCGGG------------------------GHHHHHHHEE-------EEEEEEECCCTTC
T ss_pred             CceEEEECCChH------------------------HHHHHHHHhc-------cCCEEEEEcCCCC
Confidence            699999999951                        1234455555       4789999886544

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.04  E-value=2.4e-05  Score=64.85  Aligned_cols=79  Identities=25%  Similarity=0.332  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|++|+||...++.+...|++|++++++.++.+.+.+ +     +... .+  |..  +++.+.+.+... ..
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----ga~~-v~--~~~--~~~~~~v~~~~~-~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V-----GADI-VL--PLE--EGWAKAVREATG-GA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCSE-EE--ESS--TTHHHHHHHHTT-TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE-Ee--cCc--hhHHHHHHHHhC-CC
Confidence            57899999999999999999999999999999998877654332 2     2222 22  333  233333333321 12


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+++|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999995

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.04  E-value=7.2e-05  Score=61.10  Aligned_cols=116  Identities=15%  Similarity=0.066  Sum_probs=72.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEc--CCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVR--DIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r--~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||||+|.+|..++..|+.+|.  ++++.++  +.++++.....+..... ...+.+.. |  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            689999999999999999999885  6888998  66555443344433211 12222222 2  2222           


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      +.+.|++|+.||......+ +   -.+.+..|+.....+++.+.++-        +.+.|+++|.-.
T Consensus        68 ~~~aDvVi~~ag~~~~~g~-~---r~dl~~~N~~i~~~i~~~i~~~~--------p~~~viv~SNPv  122 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPGQ-T---RIDLAGDNAPIMEDIQSSLDEHN--------DDYISLTTSNPV  122 (303)
T ss_dssp             GTTCSEEEECCCCCCCTTC-C---HHHHHHHHHHHHHHHHHHHHTTC--------SCCEEEECCSSH
T ss_pred             hCCCCEEEEcCCCCCCCCC-C---HHHHHHHHHHHHHHHHHHHHHHC--------CCcEEEEeCChH
Confidence            2378999999998532221 2   23457888887777777665541        345666655433

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.03  E-value=2.9e-05  Score=55.29  Aligned_cols=75  Identities=20%  Similarity=0.290  Sum_probs=54.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +++++|+|+ |.+|..+++.|.+.|++|++++++.+..+.    +...+   .+.++..|.++.+.+.+.      ...+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~----~~~~~---~~~~~~~d~~~~~~l~~~------~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK----ASAEI---DALVINGDCTKIKTLEDA------GIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHC---SSEEEESCTTSHHHHHHT------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHHhc---CcEEEEcCCCCHHHHHHc------Cccc
Confidence            357899987 999999999999999999999998665443    32222   245677899887665331      1246


Q ss_pred             ccEEEECCc
Q 027991          111 LNILINNAG  119 (216)
Q Consensus       111 id~li~~Ag  119 (216)
                      .|++|.+.+
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.01  E-value=9.9e-06  Score=66.63  Aligned_cols=80  Identities=14%  Similarity=0.214  Sum_probs=56.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+||+|++|...++.+...|++|++++++.++.+.+. ++     +...   ..|.++.+..+++.+ .. ...
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~~~~~~~~-~~-~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAWE---TIDYSHEDVAKRVLE-LT-DGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHHHH-HT-TTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCccHHHHHHH-Hh-CCC
Confidence            5789999999999999999999999999999999877655433 22     2222   235554433333322 21 123


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+++|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            79999999995

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.00  E-value=1.7e-05  Score=66.42  Aligned_cols=76  Identities=17%  Similarity=0.211  Sum_probs=56.9

Q ss_pred             CCCCC--EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGL--TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k--~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++||  +|+|.|+ |++|..+++.|.+ .++|.+.+++.++++..         ......+++|++|.+++.++++   
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~---------~~~~~~~~~d~~d~~~l~~~~~---   76 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV---------KEFATPLKVDASNFDKLVEVMK---   76 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------TTTSEEEECCTTCHHHHHHHHT---
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH---------hccCCcEEEecCCHHHHHHHHh---
Confidence            34444  7999998 9999999998865 57999999987665443         2335678899999999888775   


Q ss_pred             hhcCCccEEEECCccC
Q 027991          106 IQHHQLNILINNAGIM  121 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~  121 (216)
                          +.|++|++++..
T Consensus        77 ----~~DvVi~~~p~~   88 (365)
T 3abi_A           77 ----EFELVIGALPGF   88 (365)
T ss_dssp             ----TCSEEEECCCGG
T ss_pred             ----CCCEEEEecCCc
Confidence                579999998853

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.99  E-value=2.5e-05  Score=62.79  Aligned_cols=77  Identities=16%  Similarity=0.247  Sum_probs=57.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+++|+++|+|+ ||+|.+++..|++.|++|++++|+.+++++..+++...  + .+..  .|+.   ++.       +
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--~-~~~~--~~~~---~~~-------~  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--G-NIQA--VSMD---SIP-------L  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--S-CEEE--EEGG---GCC-------C
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--C-CeEE--eeHH---Hhc-------c
Confidence            4578899999998 89999999999999999999999988887777666432  1 2222  2321   110       1


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                        +..|++||+++..
T Consensus       179 --~~~DivIn~t~~~  191 (272)
T 1p77_A          179 --QTYDLVINATSAG  191 (272)
T ss_dssp             --SCCSEEEECCCC-
T ss_pred             --CCCCEEEECCCCC
Confidence              4789999999875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.98  E-value=2.8e-05  Score=67.00  Aligned_cols=85  Identities=13%  Similarity=0.201  Sum_probs=60.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEE--cc--------CCCHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAME--LD--------LSSLASVRN   99 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~D--------v~~~~~~~~   99 (216)
                      .|++++|+|++|++|...++.+...|++|++++++.++++.+ +++     +....+-.  .|        .++.+++++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHHH
Confidence            578999999999999999999999999999999877665543 222     22221111  12        245566666


Q ss_pred             HHHHHHhhc--CCccEEEECCcc
Q 027991          100 FASEYNIQH--HQLNILINNAGI  120 (216)
Q Consensus       100 ~~~~~~~~~--~~id~li~~Ag~  120 (216)
                      +.+.+.+..  .++|++|.++|.
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCc
Confidence            666666543  379999999983

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.94  E-value=2.1e-05  Score=57.68  Aligned_cols=79  Identities=10%  Similarity=0.090  Sum_probs=57.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ...+++++|+|+ |.+|..+++.|.+.|++|++++++.++.+...+       .....++..|.++.+.+.+.      .
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~------~   81 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKEC------G   81 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTT------T
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHc------C
Confidence            355778999986 999999999999999999999999876543210       11234667888886554321      1


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                      ..+.|++|.+.+.
T Consensus        82 ~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           82 MEKADMVFAFTND   94 (155)
T ss_dssp             GGGCSEEEECSSC
T ss_pred             cccCCEEEEEeCC
Confidence            2367999998773

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.92  E-value=3.6e-05  Score=64.45  Aligned_cols=77  Identities=16%  Similarity=0.155  Sum_probs=56.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++++++|+|+ |++|..+++.+...|++|++++|+.++++...+...     ..+..   +..+.+++.+.+.      
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~------  229 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVEL---LYSNSAEIETAVA------  229 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHH------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----ceeEe---eeCCHHHHHHHHc------
Confidence            56789999999 999999999999999999999999877666544332     11211   2234444443332      


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                       +.|++|++++..
T Consensus       230 -~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 -EADLLIGAVLVP  241 (361)
T ss_dssp             -TCSEEEECCCCT
T ss_pred             -CCCEEEECCCcC
Confidence             689999999874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.90  E-value=3.8e-05  Score=63.66  Aligned_cols=78  Identities=14%  Similarity=0.203  Sum_probs=55.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+||+|++|...++.+...|++|++++++.++.+.+.+ +     +... +  .|..+  ++.+.+.+.  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~-v--i~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADI-V--LNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSE-E--ECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE-E--EECCc--cHHHHHHHh--CCC
Confidence            58899999999999999999999999999999998776554432 2     2221 1  23333  233333333  334


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            79999999884

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.88  E-value=1.7e-05  Score=64.59  Aligned_cols=78  Identities=19%  Similarity=0.189  Sum_probs=55.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++++++|+|+ ||+|.+++..|++.|+ +|++++|+.+++++..+++....  .       ++.+.+++.       
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~-------~~~~~~~~~-------  199 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--S-------AYFSLAEAE-------  199 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--C-------CEECHHHHH-------
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--C-------ceeeHHHHH-------
Confidence            3578899999998 8999999999999998 89999999877766655432110  0       111222222       


Q ss_pred             hhcCCccEEEECCccC
Q 027991          106 IQHHQLNILINNAGIM  121 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~  121 (216)
                      +.....|++|++.+..
T Consensus       200 ~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          200 TRLAEYDIIINTTSVG  215 (297)
T ss_dssp             HTGGGCSEEEECSCTT
T ss_pred             hhhccCCEEEECCCCC
Confidence            2234789999999864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.86  E-value=4.7e-05  Score=63.16  Aligned_cols=104  Identities=15%  Similarity=0.135  Sum_probs=69.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|+++||+|+ |++|...++.+...|+ +|++++++.++.+.+. ++     +...   ..|..+++ +.+.+.++.. .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~-~~~~v~~~~~-g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GADY---VINPFEED-VVKEVMDITD-G  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCSE---EECTTTSC-HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCCE---EECCCCcC-HHHHHHHHcC-C
Confidence            6889999999 9999999999999999 9999999876654332 22     2221   13554432 2233333221 1


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      .++|++|+++|..                       ...+.+++.++       +.|+++.+++..+
T Consensus       235 ~g~D~vid~~g~~-----------------------~~~~~~~~~l~-------~~G~iv~~g~~~~  271 (348)
T 2d8a_A          235 NGVDVFLEFSGAP-----------------------KALEQGLQAVT-------PAGRVSLLGLYPG  271 (348)
T ss_dssp             SCEEEEEECSCCH-----------------------HHHHHHHHHEE-------EEEEEEECCCCSS
T ss_pred             CCCCEEEECCCCH-----------------------HHHHHHHHHHh-------cCCEEEEEccCCC
Confidence            2699999999841                       12345556665       3789999987544

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.85  E-value=0.00018  Score=59.88  Aligned_cols=83  Identities=20%  Similarity=0.132  Sum_probs=59.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|+++||.|+ |++|...++.....|++ |+++++++++.+.+.+ +     ...+.....|-.+.+++.+.+.+... .
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-----~~~~~~~~~~~~~~~~~~~~v~~~t~-g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-----CPEVVTHKVERLSAEESAKKIVESFG-G  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-----CTTCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----chhcccccccccchHHHHHHHHHHhC-C
Confidence            5789999998 99999999999999997 9999988776554432 2     22333444555566666555554422 2


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.83  E-value=5.1e-05  Score=61.62  Aligned_cols=74  Identities=14%  Similarity=0.191  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|+|++|++|..+++.+...|++|+++++++++.+.+. +    . +...   ..|..+.+++.   +.+    +
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~----~-ga~~---~~~~~~~~~~~---~~~----~  188 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A----L-GAEE---AATYAEVPERA---KAW----G  188 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H----T-TCSE---EEEGGGHHHHH---HHT----T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h----c-CCCE---EEECCcchhHH---HHh----c
Confidence            5789999999999999999999999999999999887766542 2    2 2221   13544412222   222    5


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+ +|.
T Consensus       189 ~~d~vid-~g~  198 (302)
T 1iz0_A          189 GLDLVLE-VRG  198 (302)
T ss_dssp             SEEEEEE-CSC
T ss_pred             CceEEEE-CCH
Confidence            8999999 884

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.82  E-value=5.2e-05  Score=63.84  Aligned_cols=106  Identities=17%  Similarity=0.232  Sum_probs=71.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+.+++++|+|+ |+||..+++.+...|++|++++++.++++...+.+     +..+   ..|..+.+++.+++.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCHHHHHHHHc-----
Confidence            578999999998 99999999999999999999999977655443322     2222   224445556555543     


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                        +.|++|++++....  +..               ..+.+..++.|+       +++.||++++.
T Consensus       231 --~aDvVi~~~~~p~~--~t~---------------~li~~~~l~~mk-------~g~~iV~va~~  270 (377)
T 2vhw_A          231 --RADLVIGAVLVPGA--KAP---------------KLVSNSLVAHMK-------PGAVLVDIAID  270 (377)
T ss_dssp             --HCSEEEECCCCTTS--CCC---------------CCBCHHHHTTSC-------TTCEEEEGGGG
T ss_pred             --CCCEEEECCCcCCC--CCc---------------ceecHHHHhcCC-------CCcEEEEEecC
Confidence              57999999886431  110               112344555554       46889999853

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.78  E-value=7.5e-05  Score=53.71  Aligned_cols=74  Identities=12%  Similarity=0.052  Sum_probs=56.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +.++|.|+ |.+|..+++.|.++|++|++++++++..+...    .    ..+.++..|.++++.++++      ...+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~----~g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----E----RGVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H----TTCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----H----cCCCEEECCCCCHHHHHhc------CcccC
Confidence            45788887 89999999999999999999999977655432    2    2356788999998876653      12357


Q ss_pred             cEEEECCcc
Q 027991          112 NILINNAGI  120 (216)
Q Consensus       112 d~li~~Ag~  120 (216)
                      |.+|.+.+.
T Consensus        73 d~vi~~~~~   81 (140)
T 3fwz_A           73 KWLILTIPN   81 (140)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEEECCC
Confidence            888887663

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.77  E-value=0.00014  Score=58.67  Aligned_cols=76  Identities=17%  Similarity=0.260  Sum_probs=57.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++++|+++|+|+ ||+|.+++..|++.|+ +|++++|+.+++++..+++....   .+.....  .+   +.       
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~~~--~~---l~-------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQAF--EQ---LK-------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEEEG--GG---CC-------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEeeH--HH---hc-------
Confidence            4678999999998 7999999999999996 89999999988888877775431   2333322  11   10       


Q ss_pred             hhcCCccEEEECCccC
Q 027991          106 IQHHQLNILINNAGIM  121 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~  121 (216)
                         ...|++||+....
T Consensus       186 ---~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 ---QSYDVIINSTSAS  198 (281)
T ss_dssp             ---SCEEEEEECSCCC
T ss_pred             ---CCCCEEEEcCcCC
Confidence               3689999987653

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.76  E-value=7.9e-05  Score=61.73  Aligned_cols=77  Identities=19%  Similarity=0.337  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+||+|++|...++.+...|++|+++ ++.++.+.+ +++     +...    .| .+ +++.+.+.+... ..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~-~~~~~~~~~~~~-~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-AS-REPEDYAAEHTA-GQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TT-SCHHHHHHHHHT-TS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cC-CCHHHHHHHHhc-CC
Confidence            57899999999999999999999999999998 665554332 222     3332    34 32 223333333322 23


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+++|.
T Consensus       216 g~D~vid~~g~  226 (343)
T 3gaz_A          216 GFDLVYDTLGG  226 (343)
T ss_dssp             CEEEEEESSCT
T ss_pred             CceEEEECCCc
Confidence            79999999983

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.75  E-value=6e-05  Score=62.36  Aligned_cols=100  Identities=14%  Similarity=0.119  Sum_probs=67.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|+++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ +     ..    ...|..++ ++.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-----a~----~v~~~~~~-~~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-----AD----RLVNPLEE-DLLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-----CS----EEECTTTS-CHHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----HH----hccCcCcc-CHHHHHHHhc--C
Confidence            6889999999 9999999999999999 99999998765443221 1     11    12355442 3334444433  3


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      +++|++|.++|.        .               ...+.+++.++       +.|+++.++..
T Consensus       230 ~g~D~vid~~g~--------~---------------~~~~~~~~~l~-------~~G~iv~~g~~  264 (343)
T 2dq4_A          230 SGVEVLLEFSGN--------E---------------AAIHQGLMALI-------PGGEARILGIP  264 (343)
T ss_dssp             SCEEEEEECSCC--------H---------------HHHHHHHHHEE-------EEEEEEECCCC
T ss_pred             CCCCEEEECCCC--------H---------------HHHHHHHHHHh-------cCCEEEEEecC
Confidence            479999999984        1               12344556655       36899998764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.72  E-value=3.7e-05  Score=57.74  Aligned_cols=78  Identities=13%  Similarity=0.100  Sum_probs=57.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++.+++++|.|+ |.+|..+++.|.+. |++|+++++++++.+..    ...  +  ..++..|.++++.+.++     .
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~--g--~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSE--G--RNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHT--T--CCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHC--C--CCEEEcCCCCHHHHHhc-----c
Confidence            455677888885 99999999999999 99999999997665443    222  2  45677899987655432     0


Q ss_pred             hcCCccEEEECCc
Q 027991          107 QHHQLNILINNAG  119 (216)
Q Consensus       107 ~~~~id~li~~Ag  119 (216)
                      ...+.|++|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1346899998766

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.70  E-value=0.00017  Score=57.30  Aligned_cols=83  Identities=17%  Similarity=0.312  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|+..                   .+.+.+.+.+....|..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            356789999998 8899999999999997 788886542                   5677778888887777777777


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      ..++++ +.+.++++       +.|++|++..
T Consensus       104 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            666654 34444443       3578877644

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.68  E-value=0.00081  Score=55.11  Aligned_cols=119  Identities=18%  Similarity=0.139  Sum_probs=72.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++.|+|++|.+|..++..|+.+|  .+|++.|+++  .+.....+.......++....    ...+.++.++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            58999999999999999999988  6899999987  333333443321111222211    0112332332       6


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      .|++|+.+|...... .+..   +.+..|+.....+++.+.++-        +.+.||++|.-...
T Consensus        69 aDvVvi~ag~~~~~g-~~r~---dl~~~n~~i~~~i~~~i~~~~--------p~a~viv~sNPv~~  122 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-MTRD---DLFNTNATIVATLTAACAQHC--------PDAMICIISNPVNS  122 (314)
T ss_dssp             CSEEEECCSCCCCTT-CCGG---GGHHHHHHHHHHHHHHHHHHC--------TTSEEEECSSCHHH
T ss_pred             CCEEEECCCcCCCCC-CcHH---HHHHHHHHHHHHHHHHHHhhC--------CCeEEEEECCCcch
Confidence            799999999864322 1222   235666665555555554442        35788887765443

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.68  E-value=0.00013  Score=61.11  Aligned_cols=76  Identities=21%  Similarity=0.327  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|+||+|++|...++.+...|++|+++++ .++.+.+ +    ++ +... .  .|.++++..+    ++.+ .+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~----~l-Ga~~-v--~~~~~~~~~~----~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-R----KL-GADD-V--IDYKSGSVEE----QLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-H----HT-TCSE-E--EETTSSCHHH----HHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-H----Hc-CCCE-E--EECCchHHHH----HHhh-cC
Confidence            5789999999999999999999999999998884 4443322 2    22 3222 1  2554433222    2222 25


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|+++|.
T Consensus       248 g~D~vid~~g~  258 (375)
T 2vn8_A          248 PFDFILDNVGG  258 (375)
T ss_dssp             CBSEEEESSCT
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.67  E-value=0.00013  Score=59.65  Aligned_cols=93  Identities=16%  Similarity=0.178  Sum_probs=59.6

Q ss_pred             CCCCCE-EEEeCCCC-----------------c-hHHHHHHHHHHcCCeEEEEEcCCcchHHHH-----HHHHhhc----
Q 027991           28 DGSGLT-AIVTGATS-----------------G-IGTETARVLALRGVHVVMGVRDIAAGKDVK-----ETIVKEI----   79 (216)
Q Consensus        28 ~~~~k~-~lItG~s~-----------------g-iG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~-----~~~~~~~----   79 (216)
                      ++.||+ +|||+|..                 | .|.++|+.++.+|+.|+++.+.... ....     ..+....    
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl-~p~~r~~~~~~~~~~~~~~~  111 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSA-FPYAHRFPPQTWLSALRPSG  111 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSC-CTTGGGSCHHHHHHHCEECC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCc-CcchhccCccchhhhhcccc
Confidence            367777 99998765                 5 9999999999999999999886432 1100     0000000    


Q ss_pred             -CCCeEEEEEccCCCHHHHHHHHHHH------------------------------HhhcCCccEEEECCccC
Q 027991           80 -PSAKVDAMELDLSSLASVRNFASEY------------------------------NIQHHQLNILINNAGIM  121 (216)
Q Consensus        80 -~~~~~~~~~~Dv~~~~~~~~~~~~~------------------------------~~~~~~id~li~~Ag~~  121 (216)
                       ....+..+..|+...++..+.+.+.                              .+.++..|++|.+|++.
T Consensus       112 ~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVs  184 (313)
T 1p9o_A          112 PALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVS  184 (313)
T ss_dssp             C-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCC
T ss_pred             ccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchh
Confidence             0122345666666655555555432                              24467899999999986

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.65  E-value=0.0005  Score=56.99  Aligned_cols=81  Identities=22%  Similarity=0.192  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHh-h
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNI-Q  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~-~  107 (216)
                      .|+++||+|+ |++|...++.+...|++|++++++.++.+.+.     +. +... .  .|.++ .+..+++.+.... .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-----~l-Ga~~-~--~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-----NC-GADV-T--LVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HT-TCSE-E--EECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----Hh-CCCE-E--EcCcccccHHHHHHHHhcccc
Confidence            5789999997 99999999999999999999998876654332     22 3321 2  24443 2222222221110 1


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                      .+++|++|+++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.64  E-value=3.1e-05  Score=56.00  Aligned_cols=72  Identities=13%  Similarity=0.209  Sum_probs=52.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +++++|.|+ |++|..+++.|...|++|++++|+.++.+...+++     +..+  .  +..+.   .+.++       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~~~~--~--~~~~~---~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----EYEY--V--LINDI---DSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----TCEE--E--ECSCH---HHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----CCce--E--eecCH---HHHhc-------C
Confidence            789999996 99999999999999999999999987766655443     2111  1  22332   23332       5


Q ss_pred             ccEEEECCccCC
Q 027991          111 LNILINNAGIMG  122 (216)
Q Consensus       111 id~li~~Ag~~~  122 (216)
                      .|++|++.+...
T Consensus        81 ~Divi~at~~~~   92 (144)
T 3oj0_A           81 NDVIITATSSKT   92 (144)
T ss_dssp             CSEEEECSCCSS
T ss_pred             CCEEEEeCCCCC
Confidence            799999988653

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.59  E-value=0.00034  Score=57.83  Aligned_cols=63  Identities=14%  Similarity=0.219  Sum_probs=51.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|+..                   .+.+.+.+.+...+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            356889999988 9999999999999997 788887643                   5677788888888887788777


Q ss_pred             EccC
Q 027991           88 ELDL   91 (216)
Q Consensus        88 ~~Dv   91 (216)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.53  E-value=0.00027  Score=54.52  Aligned_cols=73  Identities=16%  Similarity=0.139  Sum_probs=55.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++|+|+ |.+|..+++.|.++|++|++++++++..+...+    .   ....++..|.++++.++++      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~----~---~~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK----K---LKATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----H---SSSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----H---cCCeEEEcCCCCHHHHHhc------CcccCC
Confidence            4889997 999999999999999999999999776554322    2   1356788999998876643      123678


Q ss_pred             EEEECCc
Q 027991          113 ILINNAG  119 (216)
Q Consensus       113 ~li~~Ag  119 (216)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            8887766

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.53  E-value=0.00053  Score=56.91  Aligned_cols=121  Identities=12%  Similarity=0.051  Sum_probs=72.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhh-cCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .|.++++.|+|++|.+|..++..++.+|  .+|+++|.+.++++-....+... ++..++.+ .   +|.   .+.+   
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~~al---   74 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---KEAL---   74 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---HHHH---
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---HHHh---
Confidence            3557889999999999999999999999  48999999887766555555543 12222221 1   122   2222   


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcE-EEEEcCCc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGR-IINVSSEG  174 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~-iv~isS~~  174 (216)
                          ...|++|.+||...... .+   =.+.+..|+.-.-.+.+.+.++-        +.+. |+++|.-.
T Consensus        75 ----~dADvVvitaG~p~kpG-~~---R~dLl~~N~~I~~~i~~~i~~~~--------p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 ----TDAKYIVSSGGAPRKEG-MT---REDLLKGNAEIAAQLGKDIKSYC--------PDCKHVIIIFNPA  129 (343)
T ss_dssp             ----TTEEEEEECCC--------C---HHHHHHHHHHHHHHHHHHHHHHC--------TTCCEEEECSSSH
T ss_pred             ----CCCCEEEEccCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHHhc--------cCcEEEEEecCch
Confidence                26799999999853221 12   23446666655444444444442        3553 66776543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.52  E-value=0.00034  Score=58.46  Aligned_cols=79  Identities=13%  Similarity=0.114  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~  107 (216)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +... .  .|.++ .+++.+.+.++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~v~~~~~-  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GATE-C--INPQDFSKPIQEVLIEMTD-  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCSE-E--ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCce-E--eccccccccHHHHHHHHhC-
Confidence            5789999996 9999999999999999 7999999887765443 23     2221 1  24433 1234444444432 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.++|.
T Consensus       259 -~g~D~vid~~g~  270 (373)
T 2fzw_A          259 -GGVDYSFECIGN  270 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999985

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.52  E-value=0.00014  Score=59.67  Aligned_cols=75  Identities=23%  Similarity=0.300  Sum_probs=49.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++||+|++|++|...++.+...|++|+++++++++.+.+. +    + +....   .|..+.+  .+.++++.  .+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~----l-Ga~~~---i~~~~~~--~~~~~~~~--~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V----L-GAKEV---LAREDVM--AERIRPLD--KQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H----T-TCSEE---EECC-----------CC--SCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H----c-CCcEE---EecCCcH--HHHHHHhc--CCccc
Confidence            7999999999999999999999999999999987765442 2    2 32221   3444432  22222221  24799


Q ss_pred             EEEECCcc
Q 027991          113 ILINNAGI  120 (216)
Q Consensus       113 ~li~~Ag~  120 (216)
                      ++|+++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999984

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.50  E-value=0.0029  Score=52.11  Aligned_cols=119  Identities=12%  Similarity=-0.014  Sum_probs=75.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCC--CeEEEEEccCCCHHHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS--AKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++.|+|+ |.+|..++..|+..|.  +|++.|++.++++....++....|-  ..+.....|   .           
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------
Confidence            3467999996 9999999999999996  8999999987777666666654321  223333222   1           


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +....-|++|..+|....+. .+.   .+.+..|+.-.-.+.+.+.++-        +.+.|+++|.-..
T Consensus        69 ~a~~~aDvVvi~ag~p~kpG-~~R---~dL~~~N~~Iv~~i~~~I~~~~--------p~a~vlvvtNPvd  126 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQKPG-ETR---LELVEKNLKIFKGIVSEVMASG--------FDGIFLVATNPVD  126 (326)
T ss_dssp             GGGTTCSEEEECCSCCCCTT-CCH---HHHHHHHHHHHHHHHHHHHHTT--------CCSEEEECSSSHH
T ss_pred             HHhCCCCEEEEecccCCCCC-ccH---HHHHHHHHHHHHHHHHHHHHhc--------CCeEEEEcCChHH
Confidence            12236799999999853222 222   3345666554444444443331        4567787776443

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.49  E-value=0.00068  Score=56.87  Aligned_cols=104  Identities=13%  Similarity=0.103  Sum_probs=68.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC--CHHHHHHHHHHHHh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~~~~~~~~~~~  106 (216)
                      .|+++||+| +|++|...++.+...| ++|+++++++++.+.+.     ++ +... ++  |..  +.+++.+.+.++..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-----~l-Ga~~-vi--~~~~~~~~~~~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-----EI-GADL-TL--NRRETSVEERRKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-----HT-TCSE-EE--ETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-----Hc-CCcE-EE--eccccCcchHHHHHHHHhC
Confidence            478999999 8999999999999999 59999999876654432     22 3221 22  333  24454444444322


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      . .++|++|.++|..                       ..++.+++.++       +.|+++.++...
T Consensus       265 g-~g~Dvvid~~g~~-----------------------~~~~~~~~~l~-------~~G~iv~~G~~~  301 (380)
T 1vj0_A          265 G-RGADFILEATGDS-----------------------RALLEGSELLR-------RGGFYSVAGVAV  301 (380)
T ss_dssp             T-SCEEEEEECSSCT-----------------------THHHHHHHHEE-------EEEEEEECCCCS
T ss_pred             C-CCCcEEEECCCCH-----------------------HHHHHHHHHHh-------cCCEEEEEecCC
Confidence            1 2699999999842                       02334455554       478999887654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.49  E-value=0.00062  Score=56.92  Aligned_cols=79  Identities=16%  Similarity=0.166  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~  107 (216)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +    + +... .  .|.++ .+++.+.+.++.. 
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----l-Ga~~-v--i~~~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A----L-GATD-C--LNPRELDKPVQDVITELTA-  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----T-TCSE-E--ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H----h-CCcE-E--EccccccchHHHHHHHHhC-
Confidence            4789999995 9999999999999999 7999999887765432 2    2 2221 1  24442 1234444444332 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.++|.
T Consensus       264 -~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 -GGVDYSLDCAGT  275 (376)
T ss_dssp             -SCBSEEEESSCC
T ss_pred             -CCccEEEECCCC
Confidence             479999999985

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.48  E-value=0.00033  Score=58.41  Aligned_cols=103  Identities=14%  Similarity=0.127  Sum_probs=68.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+| +|++|...++.+...|++|++++++.++.+.+ +++     +....   .| .+.+++.+.+.++.. ..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~v---i~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADHG---IN-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSEE---EE-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCEE---Ec-CCcccHHHHHHHHhC-CC
Confidence            578999999 89999999999999999999999987765543 222     32221   24 333334444444322 23


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ++|++|.++|.  .    .                  .+.+++.++       ++|+++.++...+
T Consensus       257 g~D~vid~~g~--~----~------------------~~~~~~~l~-------~~G~iv~~G~~~~  291 (363)
T 3uog_A          257 GADHILEIAGG--A----G------------------LGQSLKAVA-------PDGRISVIGVLEG  291 (363)
T ss_dssp             CEEEEEEETTS--S----C------------------HHHHHHHEE-------EEEEEEEECCCSS
T ss_pred             CceEEEECCCh--H----H------------------HHHHHHHhh-------cCCEEEEEecCCC
Confidence            79999999983  1    1                  233445554       4789999986554

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.45  E-value=0.00051  Score=57.15  Aligned_cols=86  Identities=16%  Similarity=0.169  Sum_probs=53.2

Q ss_pred             CC-CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCH--HHHHHHHHHHHh
Q 027991           30 SG-LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL--ASVRNFASEYNI  106 (216)
Q Consensus        30 ~~-k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~~~  106 (216)
                      .| .++||+|++|++|...++.+...|++|+++.++.++..+..+.++. + +... ++  |..+.  +++.+.+.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-l-Ga~~-vi--~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-L-GATQ-VI--TEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-H-TCSE-EE--EHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHh-c-CCeE-EE--ecCccchHHHHHHHHHHhh
Confidence            46 8999999999999999999999999999998776653222223322 2 3221 12  22110  122222333220


Q ss_pred             -hcCCccEEEECCcc
Q 027991          107 -QHHQLNILINNAGI  120 (216)
Q Consensus       107 -~~~~id~li~~Ag~  120 (216)
                       ..+++|++|.++|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence             22479999999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.44  E-value=0.00083  Score=55.32  Aligned_cols=123  Identities=13%  Similarity=0.121  Sum_probs=67.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCC-CeEEEEEccCCCHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      +.+...++++.|+|+ |.+|..++..|+..|.  +|++.|+++++++-...++....+- ..+.+...   +.       
T Consensus         3 ~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~-------   71 (326)
T 3vku_A            3 SITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EY-------   71 (326)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CG-------
T ss_pred             ccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cH-------
Confidence            345566788999996 9999999999999986  8999999887777666666544321 12222221   21       


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                          +.+...|++|..||....+.    +.=.+.+..|+.-.    +...+.+.+.    .+.+.++++|.-.
T Consensus        72 ----~a~~~aDiVvi~ag~~~kpG----~tR~dL~~~N~~I~----~~i~~~i~~~----~p~a~ilvvtNPv  128 (326)
T 3vku_A           72 ----SDAKDADLVVITAGAPQKPG----ETRLDLVNKNLKIL----KSIVDPIVDS----GFNGIFLVAANPV  128 (326)
T ss_dssp             ----GGGTTCSEEEECCCCC--------------------CH----HHHHHHHHTT----TCCSEEEECSSSH
T ss_pred             ----HHhcCCCEEEECCCCCCCCC----chHHHHHHHHHHHH----HHHHHHHHhc----CCceEEEEccCch
Confidence                22347899999999853221    11123445554333    3333333332    1456677776543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.43  E-value=0.0017  Score=53.46  Aligned_cols=119  Identities=20%  Similarity=0.174  Sum_probs=71.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcC----CCeEEEEEccCCCHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP----SAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++....+    ..++.. ..|   .+.       
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~a-------   72 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YAA-------   72 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GGG-------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HHH-------
Confidence            45678999998 9999999999999998 999999998876644444544311    222222 122   211       


Q ss_pred             HHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                          +..-|++|..+|....+.. +.   .+.+..|+.-.    +...+.+.+.    .+.+.|+++|.-..
T Consensus        73 ----~~~aDiVIiaag~p~k~G~-~R---~dl~~~N~~i~----~~i~~~i~~~----~p~a~iivvtNPvd  128 (324)
T 3gvi_A           73 ----IEGADVVIVTAGVPRKPGM-SR---DDLLGINLKVM----EQVGAGIKKY----APEAFVICITNPLD  128 (324)
T ss_dssp             ----GTTCSEEEECCSCCCC---------CHHHHHHHHHH----HHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             ----HCCCCEEEEccCcCCCCCC-CH---HHHHHhhHHHH----HHHHHHHHHH----CCCeEEEecCCCcH
Confidence                2367999999998533221 21   23444554443    4444444432    14567777776443

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.42  E-value=0.00064  Score=60.21  Aligned_cols=91  Identities=11%  Similarity=0.132  Sum_probs=64.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEEE
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.++|...                   .+++.+.+.+.+..|..++..+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~  402 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  402 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence            56789999998 9999999999999996 899998643                   56778888888888888888877


Q ss_pred             ccC-------CCHHHHHHHHHHHHhhcCCccEEEECCcc
Q 027991           89 LDL-------SSLASVRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        89 ~Dv-------~~~~~~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      .++       ++++....-.+.+.+.+.+.|+||.+..-
T Consensus       403 ~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          403 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             ccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            665       23211111111122222357999987653

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.40  E-value=0.00065  Score=56.16  Aligned_cols=118  Identities=13%  Similarity=0.045  Sum_probs=71.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--e-----EEEEEcCC--cchHHHHHHHHhh-cCCCeEEEEEccCCCHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--H-----VVMGVRDI--AAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~-----Vi~~~r~~--~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      .+++||||+|.||..++..|+..|.  +     |++.|+++  ++++-...++... .+-  ..  ...+++  +..+. 
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~--~~~~~~--~~~~~-   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK--DVIATD--KEEIA-   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE--EEEEES--CHHHH-
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cC--CEEEcC--CcHHH-
Confidence            5799999999999999999998875  5     99999875  3455555555542 121  11  111111  11111 


Q ss_pred             HHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCc-EEEEEcCCc
Q 027991          102 SEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEG-RIINVSSEG  174 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g-~iv~isS~~  174 (216)
                            +...|++|+.||....+. ++   -.+.++.|+.....+.+.+.++-        +++ .|+++|.-.
T Consensus        77 ------~~daDvVvitAg~prkpG-~t---R~dll~~N~~i~~~i~~~i~~~~--------~~~~~vivvsNPv  132 (333)
T 5mdh_A           77 ------FKDLDVAILVGSMPRRDG-ME---RKDLLKANVKIFKCQGAALDKYA--------KKSVKVIVVGNPA  132 (333)
T ss_dssp             ------TTTCSEEEECCSCCCCTT-CC---TTTTHHHHHHHHHHHHHHHHHHS--------CTTCEEEECSSSH
T ss_pred             ------hCCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHHhC--------CCCeEEEEcCCch
Confidence                  236899999999763222 12   23356677766555555554442        345 577777644

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.39  E-value=0.00018  Score=55.20  Aligned_cols=42  Identities=24%  Similarity=0.301  Sum_probs=36.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~   74 (216)
                      +++|+||+|.+|..+++.|++.|++|++++|+.++.+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999997766555443

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.38  E-value=0.00059  Score=57.89  Aligned_cols=74  Identities=18%  Similarity=0.324  Sum_probs=53.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++.|++++|.|+ |++|..+++.+...|+ +|++++|+.+++++..+++     +..  .  .+..   ++.+.+.    
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~--~~~~---~l~~~l~----  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A--VRFD---ELVDHLA----  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E--CCGG---GHHHHHH----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCc--e--ecHH---hHHHHhc----
Confidence            478999999998 9999999999999998 8999999977665544443     222  1  2222   2333332    


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                         +.|++|++.+..
T Consensus       227 ---~aDvVi~at~~~  238 (404)
T 1gpj_A          227 ---RSDVVVSATAAP  238 (404)
T ss_dssp             ---TCSEEEECCSSS
T ss_pred             ---CCCEEEEccCCC
Confidence               679999998754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.37  E-value=0.0003  Score=56.50  Aligned_cols=75  Identities=13%  Similarity=0.212  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++++|+++|+|+ ||.|.+++..|++.|+ +|++++|+.+++++..+++..    ..+...  ++.+   +.       
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~---l~-------  178 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEA---LE-------  178 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGG---GT-------
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHH---hc-------
Confidence            4578999999998 7999999999999996 899999998887777766532    123332  2221   11       


Q ss_pred             hhcCCccEEEECCcc
Q 027991          106 IQHHQLNILINNAGI  120 (216)
Q Consensus       106 ~~~~~id~li~~Ag~  120 (216)
                      .  ...|++||+...
T Consensus       179 ~--~~~DivInaTp~  191 (272)
T 3pwz_A          179 G--QSFDIVVNATSA  191 (272)
T ss_dssp             T--CCCSEEEECSSG
T ss_pred             c--cCCCEEEECCCC
Confidence            1  368999998654

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.37  E-value=0.00069  Score=56.36  Aligned_cols=78  Identities=15%  Similarity=0.151  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.++||+|+ |++|...++.+... |++|++++++.++.+.+.     ++ +... +  .|..++  +.+.+.++.. .
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-----~l-Ga~~-v--i~~~~~--~~~~v~~~~~-g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-----RL-GADH-V--VDARRD--PVKQVMELTR-G  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-----HT-TCSE-E--EETTSC--HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-----Hh-CCCE-E--Eeccch--HHHHHHHHhC-C
Confidence            5789999999 89999999999888 999999999876654432     22 3221 1  355553  4444444322 1


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence            279999999985

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.35  E-value=0.0006  Score=57.01  Aligned_cols=74  Identities=18%  Similarity=0.241  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.++||+|+ |++|...++.+...|++|++++++.++.+.+.+ +     +...   ..|..+++.++    ++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l-----Ga~~---vi~~~~~~~~~----~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L-----GADE---VVNSRNADEMA----AHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCSE---EEETTCHHHHH----TTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCcE---EeccccHHHHH----Hhh---c
Confidence            5789999997 899999999999999999999998877665432 3     2221   13555544322    221   5


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            89999999985

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.35  E-value=0.0017  Score=53.91  Aligned_cols=79  Identities=25%  Similarity=0.230  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC--CHHHHHHHHHHHHh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~~~~~~~~~~~  106 (216)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.     ++ +... +  .|..  +.+++.+.+.+...
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-----~l-Ga~~-v--i~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-----EI-GADL-V--LQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HT-TCSE-E--EECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-----Hh-CCCE-E--EcCcccccchHHHHHHHHhC
Confidence            5789999996 9999999999999999 8999998876554332     22 3221 2  2444  23343333333322


Q ss_pred             hcCCccEEEECCcc
Q 027991          107 QHHQLNILINNAGI  120 (216)
Q Consensus       107 ~~~~id~li~~Ag~  120 (216)
                        +++|++|.++|.
T Consensus       241 --~g~D~vid~~g~  252 (356)
T 1pl8_A          241 --CKPEVTIECTGA  252 (356)
T ss_dssp             --SCCSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              579999999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.33  E-value=0.00028  Score=58.72  Aligned_cols=75  Identities=15%  Similarity=0.225  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|+ |++|...++.+...|++|+.++++.++.+.+.+ +     +... +  .|..++.+   ..+++.   +
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~-v--~~~~~~~~---~~~~~~---~  242 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADH-Y--IATLEEGD---WGEKYF---D  242 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE-E--EEGGGTSC---HHHHSC---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c-----CCCE-E--EcCcCchH---HHHHhh---c
Confidence            5789999999 999999999999999999999999887655432 3     2222 1  23333201   122222   5


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus       243 ~~D~vid~~g~  253 (360)
T 1piw_A          243 TFDLIVVCASS  253 (360)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            89999999986

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.33  E-value=0.00042  Score=57.96  Aligned_cols=79  Identities=13%  Similarity=0.114  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~  107 (216)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +    + +... .  .|.++ .+++.+.+.++.. 
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~----l-Ga~~-v--i~~~~~~~~~~~~~~~~~~-  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V----F-GATD-F--VNPNDHSEPISQVLSKMTN-  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----T-TCCE-E--ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H----h-CCce-E--EeccccchhHHHHHHHHhC-
Confidence            5789999995 9999999999999999 7999999887765432 2    2 3221 1  34443 1234444444433 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|+++|.
T Consensus       261 -~g~D~vid~~g~  272 (374)
T 1cdo_A          261 -GGVDFSLECVGN  272 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999985

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.32  E-value=0.004  Score=50.98  Aligned_cols=120  Identities=18%  Similarity=0.107  Sum_probs=73.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC--CcchHHHHHHHHhhc----CCCeEEEEEccCCCHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD--IAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~--~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      .++.+++.|+|+ |.+|..++..++..|. +|++.+++  +++.+-...++....    ...++... .   +.      
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~---d~------   73 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-S---DY------   73 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-S---CG------
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-C---CH------
Confidence            345678999997 9999999999999999 99999998  444443333333221    01222211 1   21      


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                           +.+...|++|.++|....+. ++.   .+.+..|+.-.-.+.+.+.++-        +.+.|+++|.-..
T Consensus        74 -----~a~~~aDvVIiaag~p~kpg-~~R---~dl~~~N~~i~~~i~~~i~~~~--------p~a~vlvvsNPvd  131 (315)
T 3tl2_A           74 -----ADTADSDVVVITAGIARKPG-MSR---DDLVATNSKIMKSITRDIAKHS--------PNAIIVVLTNPVD  131 (315)
T ss_dssp             -----GGGTTCSEEEECCSCCCCTT-CCH---HHHHHHHHHHHHHHHHHHHHHC--------TTCEEEECCSSHH
T ss_pred             -----HHhCCCCEEEEeCCCCCCCC-CCH---HHHHHHHHHHHHHHHHHHHHhC--------CCeEEEECCChHH
Confidence                 12347899999999864332 232   3456666555444444444431        4667888876443

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.32  E-value=0.0038  Score=51.23  Aligned_cols=121  Identities=12%  Similarity=0.116  Sum_probs=72.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.|+++++++....++....+  +....+...  ++.+.         
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~a---------   70 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYKD---------   70 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHHH---------
Confidence            44567889995 9999999999999987 999999998877655555543210  111222211  12211         


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                        +..-|++|..+|....+. ++.   .+.+..|+.-.-.+.+.+.++-        +.+.++++|.-..
T Consensus        71 --~~~aDvVIi~ag~p~k~G-~~R---~dl~~~N~~i~~~i~~~i~~~~--------p~a~vivvtNPvd  126 (321)
T 3p7m_A           71 --LENSDVVIVTAGVPRKPG-MSR---DDLLGINIKVMQTVGEGIKHNC--------PNAFVICITNPLD  126 (321)
T ss_dssp             --GTTCSEEEECCSCCCCTT-CCH---HHHHHHHHHHHHHHHHHHHHHC--------TTCEEEECCSSHH
T ss_pred             --HCCCCEEEEcCCcCCCCC-CCH---HHHHHHhHHHHHHHHHHHHHHC--------CCcEEEEecCchH
Confidence              236799999999864332 232   2345555544444444444332        3567777765443

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.30  E-value=0.00045  Score=57.56  Aligned_cols=82  Identities=17%  Similarity=0.334  Sum_probs=62.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|+..                   .+.+.+.+.+....|..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            356789999988 8999999999999996 899998652                   3567778888888888888888


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEECC
Q 027991           88 ELDLSSLASVRNFASEYNIQHHQLNILINNA  118 (216)
Q Consensus        88 ~~Dv~~~~~~~~~~~~~~~~~~~id~li~~A  118 (216)
                      ..++++..++.       + +.+.|++|.+.
T Consensus       194 ~~~i~~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          194 ALNINDYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             ECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred             ecccCchhhhh-------H-hccCCEEEEec
Confidence            77777654221       1 34667777654

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=97.29  E-value=0.00068  Score=59.94  Aligned_cols=63  Identities=14%  Similarity=0.211  Sum_probs=51.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|..                   ..+++.+.+.+.+..|..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            356789999988 9999999999999997 79999643                   25678888888888888788777


Q ss_pred             EccC
Q 027991           88 ELDL   91 (216)
Q Consensus        88 ~~Dv   91 (216)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.27  E-value=0.00069  Score=55.81  Aligned_cols=77  Identities=14%  Similarity=0.138  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|+++||+|+ |++|...++.+...|++|+.++++.++.+.+.     ++ +....   .|..+++..+.+. +   ..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-----~l-Ga~~~---i~~~~~~~~~~~~-~---~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-----RL-GAEVA---VNARDTDPAAWLQ-K---EIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HT-TCSEE---EETTTSCHHHHHH-H---HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----Hc-CCCEE---EeCCCcCHHHHHH-H---hCC
Confidence            5789999987 89999999999999999999999877655332     22 32221   3444433322222 2   335


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus       232 ~~d~vid~~g~  242 (340)
T 3s2e_A          232 GAHGVLVTAVS  242 (340)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEEeCCC
Confidence            89999999873

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.26  E-value=0.0075  Score=49.70  Aligned_cols=121  Identities=10%  Similarity=0.005  Sum_probs=76.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhh--cCCCeEEEEEccCCCHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKE--IPSAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ....+++.|+|+ |.+|..++..|+.+|.  +|++.|++.++++-...++...  ++... ..+..  .|.+        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~-~i~~~--~d~~--------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTP-KIVSS--KDYS--------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCC-EEEEC--SSGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCC-eEEEc--CCHH--------
Confidence            355678999997 9999999999999996  8999999987777766666643  22211 12221  1221        


Q ss_pred             HHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                         ....-|++|.+||....+. ++..   +.++.|+.-.-.+.+.+.++ .       +.+.++++|.-..
T Consensus        84 ---~~~~aDiVvi~aG~~~kpG-~tR~---dL~~~N~~I~~~i~~~i~~~-~-------p~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 ---VTANSKLVIITAGARQQEG-ESRL---NLVQRNVNIFKFIIPNVVKY-S-------PQCKLLIVSNPVD  140 (331)
T ss_dssp             ---GGTTEEEEEECCSCCCCTT-CCGG---GGHHHHHHHHHHHHHHHHHH-C-------TTCEEEECSSSHH
T ss_pred             ---HhCCCCEEEEccCCCCCCC-ccHH---HHHHHHHHHHHHHHHHHHHH-C-------CCeEEEEecChHH
Confidence               1237899999999864322 2322   34556655444455554444 1       4567777776443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.26  E-value=0.00059  Score=56.73  Aligned_cols=75  Identities=17%  Similarity=0.247  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+++|+|+ |++|...++.+...|++|++++++.++.+.+.+    ++ +... +  .|..+.+.+.+       ..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~----~l-Ga~~-v--i~~~~~~~~~~-------~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ----DL-GADD-Y--VIGSDQAKMSE-------LAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT----TS-CCSC-E--EETTCHHHHHH-------STT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH----Hc-CCce-e--eccccHHHHHH-------hcC
Confidence            6889999995 999999999999999999999998776544331    22 2221 1  24445433222       224


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.25  E-value=0.00033  Score=56.46  Aligned_cols=44  Identities=14%  Similarity=0.043  Sum_probs=38.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDV   71 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~   71 (216)
                      .++++|+++|+|+ ||.|.+++..|.+.|+ +|+++.|+.+++++.
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            4567899999997 8999999999999998 899999998776543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.21  E-value=0.00069  Score=56.50  Aligned_cols=78  Identities=12%  Similarity=0.173  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLAL-RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|+++||+||+|++|...++.+.. .|++|++++++.++.+.+.     +. +....   .|..+  ++.+.+.++  ..
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-----~l-Gad~v---i~~~~--~~~~~v~~~--~~  237 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-----SL-GAHHV---IDHSK--PLAAEVAAL--GL  237 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-----HT-TCSEE---ECTTS--CHHHHHHTT--CS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-----Hc-CCCEE---EeCCC--CHHHHHHHh--cC
Confidence            578999999999999999887776 5889999999876654432     22 32221   24433  233333322  23


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.++|.
T Consensus       238 ~g~Dvvid~~g~  249 (363)
T 4dvj_A          238 GAPAFVFSTTHT  249 (363)
T ss_dssp             CCEEEEEECSCH
T ss_pred             CCceEEEECCCc
Confidence            589999999884

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.19  E-value=0.001  Score=55.59  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~  107 (216)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +    + +...   ..|.++ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~----l-Ga~~---vi~~~~~~~~~~~~~~~~~~-  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-E----V-GATE---CVNPQDYKKPIQEVLTEMSN-  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----T-TCSE---EECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H----h-CCce---EecccccchhHHHHHHHHhC-
Confidence            5789999995 9999999999999999 7999999887765432 2    2 2221   134443 1234444444432 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.++|.
T Consensus       260 -~g~D~vid~~g~  271 (374)
T 2jhf_A          260 -GGVDFSFEVIGR  271 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             479999999985

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.17  E-value=0.00036  Score=58.46  Aligned_cols=79  Identities=10%  Similarity=0.081  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~  107 (216)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.     ++ +...   ..|..+ .+++.+.+.++.. 
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-----~l-Ga~~---vi~~~~~~~~~~~~i~~~~~-  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-----KF-GVNE---FVNPKDHDKPIQEVIVDLTD-  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-----TT-TCCE---EECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-----Hc-CCcE---EEccccCchhHHHHHHHhcC-
Confidence            4778999998 9999999999999999 8999999887755332     22 3222   134432 2334444444432 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.++|.
T Consensus       262 -gg~D~vid~~g~  273 (378)
T 3uko_A          262 -GGVDYSFECIGN  273 (378)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             389999999985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.17  E-value=0.0016  Score=54.40  Aligned_cols=79  Identities=14%  Similarity=0.143  Sum_probs=52.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      -.|+++||.|++|++|...++.+...|++|+.+. +.++.+. .+    ++ +... +  .|..+++ +.+.+.++.  .
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~----~l-Ga~~-v--i~~~~~~-~~~~v~~~t--~  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AK----SR-GAEE-V--FDYRAPN-LAQTIRTYT--K  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HH----HT-TCSE-E--EETTSTT-HHHHHHHHT--T
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HH----Hc-CCcE-E--EECCCch-HHHHHHHHc--c
Confidence            4578999999999999999999999999998886 4454432 22    22 3221 1  2444433 333333332  2


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.++|.
T Consensus       230 g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 NNLRYALDCITN  241 (371)
T ss_dssp             TCCCEEEESSCS
T ss_pred             CCccEEEECCCc
Confidence            459999999985

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.16  E-value=0.00055  Score=56.00  Aligned_cols=74  Identities=11%  Similarity=0.190  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+++|+||+|++|...++.+...|++|+.+.+.. +. +..+++     +...   ..|..+.+.+.+       ...
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l-----Ga~~---~i~~~~~~~~~~-------~~~  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL-----GAEQ---CINYHEEDFLLA-------IST  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH-----TCSE---EEETTTSCHHHH-------CCS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc-----CCCE---EEeCCCcchhhh-------hcc
Confidence            578999999999999999999999999999887543 22 222222     3222   134444332222       124


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus       215 g~D~v~d~~g~  225 (321)
T 3tqh_A          215 PVDAVIDLVGG  225 (321)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.15  E-value=0.00065  Score=56.20  Aligned_cols=69  Identities=17%  Similarity=0.246  Sum_probs=50.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.++||+|+ |++|...++.+...|++|+++++++++.+.+.+     + +....+     ++.+.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-----l-Ga~~v~-----~~~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-----M-GVKHFY-----TDPKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-----T-TCSEEE-----SSGGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-----c-CCCeec-----CCHHHHhc----------
Confidence            5789999997 999999999999999999999999887664422     2 333222     33332211          


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus       234 ~~D~vid~~g~  244 (348)
T 3two_A          234 ELDFIISTIPT  244 (348)
T ss_dssp             CEEEEEECCCS
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.14  E-value=0.00093  Score=56.02  Aligned_cols=80  Identities=20%  Similarity=0.182  Sum_probs=53.5

Q ss_pred             CCCEEEEeC-CCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG-~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.++||.| |+|++|...++.+...|++|+.+++++++.+.+.+     . +... +  .|..+++ +.+.+.++... 
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----l-Ga~~-~--~~~~~~~-~~~~v~~~t~~-  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-----Q-GAVH-V--CNAASPT-FMQDLTEALVS-  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-----T-TCSC-E--EETTSTT-HHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-----C-CCcE-E--EeCCChH-HHHHHHHHhcC-
Confidence            577899987 99999999999999999999999988776554332     2 2221 1  2444432 22222222211 


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999995

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.14  E-value=0.00071  Score=56.20  Aligned_cols=73  Identities=18%  Similarity=0.213  Sum_probs=51.3

Q ss_pred             CEEEEeCCCCchHHHH-HHHH-HHcCCe-EEEEEcCCc---chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTET-ARVL-ALRGVH-VVMGVRDIA---AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        32 k~~lItG~s~giG~~~-a~~l-~~~g~~-Vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +++||+|+ |++|... ++.+ ...|++ |+.++++.+   +.+.+. +    + +.  ..+  |..++ ++.+ +.++ 
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~----l-Ga--~~v--~~~~~-~~~~-i~~~-  239 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-E----L-DA--TYV--DSRQT-PVED-VPDV-  239 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-H----T-TC--EEE--ETTTS-CGGG-HHHH-
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-H----c-CC--ccc--CCCcc-CHHH-HHHh-
Confidence            89999999 9999999 8888 788997 999999876   554332 2    2 32  222  55443 2333 4444 


Q ss_pred             hhcCCccEEEECCcc
Q 027991          106 IQHHQLNILINNAGI  120 (216)
Q Consensus       106 ~~~~~id~li~~Ag~  120 (216)
                        .+++|++|.++|.
T Consensus       240 --~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 --YEQMDFIYEATGF  252 (357)
T ss_dssp             --SCCEEEEEECSCC
T ss_pred             --CCCCCEEEECCCC
Confidence              2489999999984

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.13  E-value=0.001  Score=54.85  Aligned_cols=77  Identities=16%  Similarity=0.167  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .|+++||+|+ |++|...++.+...  |++|+++++++++.+.+. ++     +... +  .|..+.   .+.++++.+ 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GADY-V--SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCSE-E--ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCCE-E--eccccc---hHHHHHhhc-
Confidence            6889999999 99999999999889  999999998877654432 22     2221 1  233220   122333332 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                      ..++|++|.++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            2379999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.13  E-value=0.00097  Score=55.73  Aligned_cols=80  Identities=21%  Similarity=0.295  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH-hh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN-IQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-~~  107 (216)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +...   ..|.++.+. .+.+.+.. ..
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~-~~~i~~~~~~~  250 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-----GATA---TVDPSAGDV-VEAIAGPVGLV  250 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTSSCH-HHHHHSTTSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EECCCCcCH-HHHHHhhhhcc
Confidence            5789999998 9999999999999999 899888887664432 222     2221   135544332 22222210 12


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                      .+++|++|.++|.
T Consensus       251 ~gg~Dvvid~~G~  263 (370)
T 4ej6_A          251 PGGVDVVIECAGV  263 (370)
T ss_dssp             TTCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2489999999884

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.12  E-value=0.0053  Score=49.74  Aligned_cols=117  Identities=11%  Similarity=0.071  Sum_probs=70.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++.|+|+ |.+|.+++..|+..|.  +|.+.++++++++-...++....+  .....+...  +|.+.+           
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a~-----------   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHHh-----------
Confidence            5789999 9999999999999997  899999998776533333332210  111122211  122222           


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ..-|++|..+|....+. ++.   .+.+..|+.    +++...+.+.+.    .+.+.|+++|.-..
T Consensus        68 ~~aDiVViaag~~~kpG-~~R---~dl~~~N~~----i~~~i~~~i~~~----~p~a~iivvsNPvd  122 (294)
T 1oju_A           68 KGSEIIVVTAGLARKPG-MTR---LDLAHKNAG----IIKDIAKKIVEN----APESKILVVTNPMD  122 (294)
T ss_dssp             TTCSEEEECCCCCCCSS-CCH---HHHHHHHHH----HHHHHHHHHHTT----STTCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC-CcH---HHHHHHHHH----HHHHHHHHHHhh----CCCeEEEEeCCcch
Confidence            36799999999864322 232   234555543    444444444432    24678888886443

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.09  E-value=0.00048  Score=53.69  Aligned_cols=72  Identities=14%  Similarity=0.089  Sum_probs=53.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .+.++|.|+ |.+|..+++.|.++|+ |++++++++..+..    .     ..+.++.+|.++++.++++      ...+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~----~-----~~~~~i~gd~~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL----R-----SGANFVHGDPTRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH----H-----TTCEEEESCTTCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH----h-----cCCeEEEcCCCCHHHHHhc------Ccch
Confidence            457899998 8999999999999999 99999887654432    2     1266788999998776543      1235


Q ss_pred             ccEEEECCc
Q 027991          111 LNILINNAG  119 (216)
Q Consensus       111 id~li~~Ag  119 (216)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            688877655

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.09  E-value=0.0054  Score=50.43  Aligned_cols=123  Identities=13%  Similarity=0.145  Sum_probs=73.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ++.+..++.|+|+ |.+|..++..++..+.  +|++.|++.++++....++....+ ...+.+.. |  +.++       
T Consensus         5 ~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a-------   73 (326)
T 2zqz_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD-------   73 (326)
T ss_dssp             -CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH-------
Confidence            3445578999999 9999999999998885  899999988777666666654321 11222222 2  2222       


Q ss_pred             HHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                          +...|++|..+|...... ++-   .+.+..|..-.-.+++.+.++        .+.+.|+++|.-...
T Consensus        74 ----~~~aDvVii~ag~~~k~g-~~R---~dl~~~n~~i~~~i~~~i~~~--------~p~a~iiv~tNPv~~  130 (326)
T 2zqz_A           74 ----AKDADLVVITAGAPQKPG-ETR---LDLVNKNLKILKSIVDPIVDS--------GFNGIFLVAANPVDI  130 (326)
T ss_dssp             ----GGGCSEEEECCCCC------CH---HHHHHHHHHHHHHHHHHHHHH--------TCCSEEEECSSSHHH
T ss_pred             ----hCCCCEEEEcCCCCCCCC-CCH---HHHHHHHHHHHHHHHHHHHHH--------CCCeEEEEeCCcHHH
Confidence                236799999999853221 122   234445544444444444333        156788888764443

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.07  E-value=0.001  Score=55.26  Aligned_cols=84  Identities=19%  Similarity=0.266  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.++||+|++|++|...++.+...|++++++.+..++.++..+.++ ++ +... ++  |-.+. . .+.+.++....+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~l-Ga~~-vi--~~~~~-~-~~~~~~~~~~~~  239 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK-SL-GAEH-VI--TEEEL-R-RPEMKNFFKDMP  239 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH-HT-TCSE-EE--EHHHH-H-SGGGGGTTSSSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH-hc-CCcE-EE--ecCcc-h-HHHHHHHHhCCC
Confidence            57899999999999999999998899998888766544332223332 23 3221 12  21111 0 111112222223


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus       240 ~~Dvvid~~g~  250 (357)
T 1zsy_A          240 QPRLALNCVGG  250 (357)
T ss_dssp             CCSEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            58999999884

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.07  E-value=0.0009  Score=55.89  Aligned_cols=79  Identities=15%  Similarity=0.115  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~  107 (216)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +    + +... +  .|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----l-Ga~~-v--i~~~~~~~~~~~~i~~~t~-  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E----L-GATE-C--LNPKDYDKPIYEVICEKTN-  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H----T-TCSE-E--ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H----c-CCcE-E--EecccccchHHHHHHHHhC-
Confidence            4789999995 9999999999989999 7999998887765432 2    2 3221 1  24332 1234444444332 


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                       +++|++|.++|.
T Consensus       260 -gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 -GGVDYAVECAGR  271 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999985

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.03  E-value=0.014  Score=47.77  Aligned_cols=120  Identities=13%  Similarity=0.121  Sum_probs=71.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +...++.|+|+ |.+|..++..|+.+|.  +|++.|.++++++.....+....+  +..+.+.. |  +.+.        
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~a--------   71 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYSD--------   71 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGGG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHHH--------
Confidence            34568999998 9999999999999884  899999987766544444433221  12222222 2  2222        


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                         +...|++|..+|...... .+.   .+.+..|..-...+++.+.++        .+.+.|+++|.-..
T Consensus        72 ---~~~aDvVvi~ag~~~~~g-~~r---~dl~~~n~~i~~~i~~~i~~~--------~p~a~viv~tNPv~  127 (317)
T 3d0o_A           72 ---CHDADLVVICAGAAQKPG-ETR---LDLVSKNLKIFKSIVGEVMAS--------KFDGIFLVATNPVD  127 (317)
T ss_dssp             ---GTTCSEEEECCCCCCCTT-CCH---HHHHHHHHHHHHHHHHHHHHT--------TCCSEEEECSSSHH
T ss_pred             ---hCCCCEEEECCCCCCCCC-CcH---HHHHHHHHHHHHHHHHHHHHh--------CCCcEEEEecCcHH
Confidence               237899999999853322 222   233444544333344433333        14677777665443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.03  E-value=0.014  Score=48.39  Aligned_cols=123  Identities=13%  Similarity=0.025  Sum_probs=68.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCCc--chHHHHHHHHhhcCCCeEEEEEccCCCHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVR   98 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   98 (216)
                      .++.-+|.|+||+|+||..++..|+....       ++.+.|..+.  .++-..-++..............  ++..   
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~---   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR---   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH---
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH---
Confidence            35556899999999999999999987542       6888888653  23333334443221122222221  1221   


Q ss_pred             HHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991           99 NFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus        99 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      +.       +..-|++|..||....+. ++.+   +.++.|+.-.-.+.+.+.++-.       +...|+.+|.-
T Consensus        96 ~a-------~~~advVvi~aG~prkpG-mtR~---DLl~~Na~I~~~~~~~i~~~a~-------~~~~vlvvsNP  152 (345)
T 4h7p_A           96 VA-------FDGVAIAIMCGAFPRKAG-MERK---DLLEMNARIFKEQGEAIAAVAA-------SDCRVVVVGNP  152 (345)
T ss_dssp             HH-------TTTCSEEEECCCCCCCTT-CCHH---HHHHHHHHHHHHHHHHHHHHSC-------TTCEEEECSSS
T ss_pred             HH-------hCCCCEEEECCCCCCCCC-CCHH---HHHHHhHHHHHHHHHHHHhhcc-------CceEEEEeCCC
Confidence            11       237899999999864332 2433   4566675544444444333311       23455666653

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.99  E-value=0.00096  Score=54.69  Aligned_cols=87  Identities=17%  Similarity=0.088  Sum_probs=58.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++|++++|.|++.-+|..+++.|+..|++|.+++|+..+..+..+++.    ...........++++++.+.+.+  
T Consensus       172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la----~~~~~~t~~~~t~~~~L~e~l~~--  245 (320)
T 1edz_A          172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK----LNKHHVEDLGEYSEDLLKKCSLD--  245 (320)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS----CCCCEEEEEEECCHHHHHHHHHH--
T ss_pred             CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh----hhcccccccccccHhHHHHHhcc--
Confidence            447899999999997778999999999999999999887433211111110    11111111122445677776664  


Q ss_pred             hhcCCccEEEECCccCCC
Q 027991          106 IQHHQLNILINNAGIMGT  123 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~  123 (216)
                           .|++|...|...+
T Consensus       246 -----ADIVIsAtg~p~~  258 (320)
T 1edz_A          246 -----SDVVITGVPSENY  258 (320)
T ss_dssp             -----CSEEEECCCCTTC
T ss_pred             -----CCEEEECCCCCcc
Confidence                 5999999997554

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.97  E-value=0.0027  Score=53.66  Aligned_cols=79  Identities=14%  Similarity=0.251  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +...   ..|..+++ +.+.+.++.. .
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~~-~~~~i~~~t~-g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GADH---VIDPTKEN-FVEAVLDYTN-G  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTTSC-HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EEcCCCCC-HHHHHHHHhC-C
Confidence            5779999998 9999999999999999 899998887665433 222     3221   12444432 2233333221 1


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            269999999985

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.96  E-value=0.004  Score=52.14  Aligned_cols=75  Identities=11%  Similarity=0.086  Sum_probs=55.2

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      ++....+.+++++|.|+ |.+|..+++.+.+.|.+|++++.+.+....       .. .  -..+..|..|.+.+.++++
T Consensus         4 ~~~~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~-------~~-a--d~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A            4 MNFNKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR-------YV-A--HEFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             SSCCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG-------GG-S--SEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh-------hh-C--CEEEECCCCCHHHHHHHHH
Confidence            44455577899999987 789999999999999999999877543211       00 1  1356689999998888775


Q ss_pred             HHHhhcCCccEEE
Q 027991          103 EYNIQHHQLNILI  115 (216)
Q Consensus       103 ~~~~~~~~id~li  115 (216)
                      +       +|+++
T Consensus        73 ~-------~dvi~   78 (377)
T 3orq_A           73 K-------CDVIT   78 (377)
T ss_dssp             H-------CSEEE
T ss_pred             h-------CCcce
Confidence            3       57763

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.95  E-value=0.0019  Score=54.72  Aligned_cols=43  Identities=16%  Similarity=0.022  Sum_probs=37.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      .+.+++++|+|+ |.+|..+++.+...|++|++++++.++.+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467899999997 9999999999999999999999998776543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.93  E-value=0.041  Score=45.24  Aligned_cols=77  Identities=18%  Similarity=0.129  Sum_probs=52.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhh---cC-CCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE---IP-SAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~---~~-~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++.|+|+ |.+|..++..|+..|+ +|++.++++++++.....+...   .+ ..++...    +|.+   +.+    
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea~----   76 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AAL----   76 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HHH----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HHh----
Confidence            357999998 9999999999999998 9999999988776644433332   11 1222221    2322   122    


Q ss_pred             hhcCCccEEEECCccCC
Q 027991          106 IQHHQLNILINNAGIMG  122 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~  122 (216)
                         ...|++|..+|...
T Consensus        77 ---~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 ---TGADCVIVTAGLTK   90 (331)
T ss_dssp             ---TTCSEEEECCSCSS
T ss_pred             ---CCCCEEEEccCCCC
Confidence               26799999999753

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.93  E-value=0.0015  Score=55.00  Aligned_cols=80  Identities=21%  Similarity=0.215  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|+++||.|+ |++|...++.+...|+ +|++++++.++.+.+.     ++ +..  .  .|.++.+.+.+.+.++.. .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-----~l-Ga~--~--i~~~~~~~~~~~v~~~t~-g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-----AQ-GFE--I--ADLSLDTPLHEQIAALLG-E  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HT-TCE--E--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-----Hc-CCc--E--EccCCcchHHHHHHHHhC-C
Confidence            5789999995 9999999999989999 6899988876654432     22 332  2  354443323333333221 1


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                      .++|++|.++|..
T Consensus       253 ~g~Dvvid~~G~~  265 (398)
T 1kol_A          253 PEVDCAVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCCCEEEECCCCc
Confidence            3699999999863

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.88  E-value=0.013  Score=46.86  Aligned_cols=42  Identities=21%  Similarity=0.173  Sum_probs=36.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~   74 (216)
                      +++.|.|+ |.+|..+|+.|+..|++|++.+++.+.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            57788876 8999999999999999999999998877666554

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.87  E-value=0.0079  Score=49.25  Aligned_cols=118  Identities=16%  Similarity=0.098  Sum_probs=68.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCC-CeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPS-AKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ..++.|+|+ |.+|..++..|+.+|.  +|++.|.++++++.....+....+- ..+.+. .  .+.           +.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------SD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------HH
Confidence            356889998 9999999999999986  8999999987776555555433210 122111 1  121           12


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +...|++|..+|...... .+   -.+.+..|+.-...+++.+.++   .     +.+.|+++|.-.+
T Consensus        72 ~~~aDvVii~~g~p~k~g-~~---r~dl~~~n~~i~~~i~~~i~~~---~-----p~a~viv~tNPv~  127 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKPG-ET---RLDLAKKNVMIAKEVTQNIMKY---Y-----NHGVILVVSNPVD  127 (318)
T ss_dssp             GTTCSEEEECCCC-------C---HHHHHHHHHHHHHHHHHHHHHH---C-----CSCEEEECSSSHH
T ss_pred             hCCCCEEEEcCCCCCCCC-cC---HHHHHHhhHHHHHHHHHHHHHh---C-----CCcEEEEecCcHH
Confidence            347899999999853221 12   2234566665555555555554   1     4667777665443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.83  E-value=0.0027  Score=53.50  Aligned_cols=79  Identities=19%  Similarity=0.265  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.++||.|+ |++|...++.+...|+ +|+.++++.++.+.+    + ++ +.  ..  .|..+.+.+.+.+.++.. .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~-~l-Ga--~~--i~~~~~~~~~~~~~~~~~-g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----S-DA-GF--ET--IDLRNSAPLRDQIDQILG-K  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----H-TT-TC--EE--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----H-Hc-CC--cE--EcCCCcchHHHHHHHHhC-C
Confidence            5789999996 9999999999988999 899999987665432    2 22 33  22  344442221222222221 1


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence            269999999985

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.80  E-value=0.015  Score=47.42  Aligned_cols=118  Identities=19%  Similarity=0.175  Sum_probs=73.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++.|+|+ |.+|..++..|+.++  .+|++.|.++++++....++....+ ...+.+.. |  +.++           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h
Confidence            36889998 999999999999988  5899999998777765666654321 11222222 2  2222           2


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      ...|++|..+|....+. ++-.   +.+..|..-...+++.+.++        .+.+.|+++|.-...
T Consensus        66 ~~aD~Vii~ag~~~~~g-~~r~---dl~~~n~~i~~~i~~~i~~~--------~p~a~iiv~tNPv~~  121 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRPG-ETRL---QLLDRNAQVFAQVVPRVLEA--------APEAVLLVATNPVDV  121 (310)
T ss_dssp             TTEEEEEECCCCCCCTT-CCHH---HHHHHHHHHHHHHHHHHHHH--------CTTCEEEECSSSHHH
T ss_pred             CCCCEEEECCCCCCCCC-cCHH---HHHHhhHHHHHHHHHHHHHH--------CCCcEEEEecCchHH
Confidence            37899999999864332 2222   33444544444444444333        156788888765443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.79  E-value=0.029  Score=45.80  Aligned_cols=118  Identities=15%  Similarity=0.119  Sum_probs=71.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-C--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEc-cCCCHHHHHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLALR-G--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL-DLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~-g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++.|+||+|.+|..++..|..+ +  .+|++.|.++ +.+-...++...  ......... .-.+.+++           
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~-----------   67 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGFSGEDATPAL-----------   67 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CSSEEEEEECSSCCHHHH-----------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CCCceEEEecCCCcHHHh-----------
Confidence            5889999999999999999876 5  4799999987 444334444432  122222211 11122332           


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      ...|++|..||....+. ++.   .+.++.|..-.-.+.+.+.++-        +.+.|+++|.-...
T Consensus        68 ~~aDivii~ag~~rkpG-~~R---~dll~~N~~I~~~i~~~i~~~~--------p~a~vlvvtNPvd~  123 (312)
T 3hhp_A           68 EGADVVLISAGVARKPG-MDR---SDLFNVNAGIVKNLVQQVAKTC--------PKACIGIITNPVNT  123 (312)
T ss_dssp             TTCSEEEECCSCSCCTT-CCH---HHHHHHHHHHHHHHHHHHHHHC--------TTSEEEECSSCHHH
T ss_pred             CCCCEEEEeCCCCCCCC-CCH---HHHHHHHHHHHHHHHHHHHHHC--------CCcEEEEecCcchh
Confidence            26899999999863322 232   4456666655555555554441        45678888764433

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.79  E-value=0.0042  Score=51.71  Aligned_cols=78  Identities=10%  Similarity=0.061  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +++     +... +  .|..+++ +.+.+.+...  
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~-v--i~~~~~~-~~~~~~~~~~--  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GATH-V--INSKTQD-PVAAIKEITD--  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TCSE-E--EETTTSC-HHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCCE-E--ecCCccC-HHHHHHHhcC--
Confidence            5779999995 9999999999988999 699999887665443 222     2222 2  2333322 2222333222  


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999984

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.76  E-value=0.0028  Score=54.20  Aligned_cols=64  Identities=22%  Similarity=0.274  Sum_probs=49.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEEE
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.++|...                   .+++.+.+.+.+..|..++....
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            36788999987 9999999999999997 798986321                   45677778888777777777766


Q ss_pred             ccCCC
Q 027991           89 LDLSS   93 (216)
Q Consensus        89 ~Dv~~   93 (216)
                      .++++
T Consensus       117 ~~i~~  121 (434)
T 1tt5_B          117 NKIQD  121 (434)
T ss_dssp             SCGGG
T ss_pred             cccch
Confidence            65543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.75  E-value=0.0011  Score=53.50  Aligned_cols=45  Identities=11%  Similarity=0.154  Sum_probs=38.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDV   71 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~   71 (216)
                      ..++++|+++|+|+ ||.|.+++..|.+.|+ +|.++.|+.+++++.
T Consensus       117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~L  162 (282)
T 3fbt_A          117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI  162 (282)
T ss_dssp             TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            35578999999997 7999999999999998 899999998765544

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.70  E-value=0.0039  Score=48.50  Aligned_cols=43  Identities=19%  Similarity=0.233  Sum_probs=37.4

Q ss_pred             ccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        22 ~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      .++-..+++||.|||+|| |.+|...++.|++.|++|++++...
T Consensus        22 ~~Pifl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~   64 (223)
T 3dfz_A           22 MYTVMLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTV   64 (223)
T ss_dssp             CCEEEECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred             ccccEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            344567899999999998 7999999999999999999998764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.70  E-value=0.003  Score=50.53  Aligned_cols=41  Identities=22%  Similarity=0.166  Sum_probs=37.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~   72 (216)
                      +|+++|.|+ ||.|.+++..|.+.|.+|.++.|+.+++++..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            789999997 99999999999999999999999998887766

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.70  E-value=0.029  Score=46.11  Aligned_cols=118  Identities=14%  Similarity=0.014  Sum_probs=73.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhc--C-CCeEEEEEccCCCHHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI--P-SAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~--~-~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..+++.|+|+ |.+|..++..++..|.  +|++.|.++++++.....+....  + ..++. ...|..+           
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~t~d~~~-----------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIV-SGKDYSV-----------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEE-EESSSCS-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEE-EcCCHHH-----------
Confidence            3468999998 9999999999999996  89999998877766655555432  1 12221 2223221           


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                         +...|++|.+||....+.+ +..   +.+..|+.-    .+...+.+.+.    .+.+.++++|.-..
T Consensus        87 ---~~daDiVIitaG~p~kpG~-tR~---dll~~N~~I----~k~i~~~I~k~----~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           87 ---SAGSKLVVITAGARQQEGE-SRL---NLVQRNVNI----FKFIIPNIVKH----SPDCLKELHPELGT  142 (330)
T ss_dssp             ---CSSCSEEEECCSCCCCSSC-CTT---GGGHHHHHH----HHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             ---hCCCCEEEEeCCCCCCCCC-CHH---HHHHhhHHH----HHHHHHHHHhh----CCCceEEeCCCccH
Confidence               2368999999998643322 211   233444433    33444444332    14677888886443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.66  E-value=0.0035  Score=50.96  Aligned_cols=68  Identities=6%  Similarity=0.009  Sum_probs=47.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.++||+|+ |++|...++.+...|++|+.++ +.++.+.+. ++     +.... +  |  |   .++    +   .+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~l-----Ga~~v-~--~--d---~~~----v---~~  198 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KR-----GVRHL-Y--R--E---PSQ----V---TQ  198 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HH-----TEEEE-E--S--S---GGG----C---CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-Hc-----CCCEE-E--c--C---HHH----h---CC
Confidence            5789999999 9999999999999999999999 776655442 23     33222 2  3  2   111    1   45


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus       199 g~Dvv~d~~g~  209 (315)
T 3goh_A          199 KYFAIFDAVNS  209 (315)
T ss_dssp             CEEEEECC---
T ss_pred             CccEEEECCCc
Confidence            89999999885

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.66  E-value=0.0031  Score=56.28  Aligned_cols=83  Identities=25%  Similarity=0.336  Sum_probs=60.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC-------------------cchHHHHHHHHhhcCCCeEEEEE
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI-------------------AAGKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      +.+.+|+|.|+ ||+|..+++.|+..|. ++.++|...                   .+++.+.+.+....|..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            45678999988 9999999999999997 899987432                   33556677777777778888888


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEECCc
Q 027991           89 LDLSSLASVRNFASEYNIQHHQLNILINNAG  119 (216)
Q Consensus        89 ~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag  119 (216)
                      .++++.....+++       .+.|++|.+..
T Consensus        94 ~~i~~~~~~~~~~-------~~~DlVvda~D  117 (640)
T 1y8q_B           94 DSIMNPDYNVEFF-------RQFILVMNALD  117 (640)
T ss_dssp             SCTTSTTSCHHHH-------TTCSEEEECCS
T ss_pred             cccchhhhhHhhh-------cCCCEEEECCC
Confidence            8886532112222       36788887643

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.65  E-value=0.0064  Score=50.05  Aligned_cols=103  Identities=17%  Similarity=0.173  Sum_probs=65.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|+|+ |++|...++.+... |++|+.+++++++.+.+.     ++ +... .+  |-.+  +..+.+.++.. .
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-----~l-Ga~~-~i--~~~~--~~~~~v~~~t~-g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-----EV-GADA-AV--KSGA--GAADAIRELTG-G  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-----HT-TCSE-EE--ECST--THHHHHHHHHG-G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-----Hc-CCCE-EE--cCCC--cHHHHHHHHhC-C
Confidence            5789999998 99999999988877 679999999877655332     22 3222 12  2222  22222333221 1


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      .++|++|.++|..                       ...+.++..+.       +.|+++.++...+
T Consensus       238 ~g~d~v~d~~G~~-----------------------~~~~~~~~~l~-------~~G~iv~~G~~~~  274 (345)
T 3jv7_A          238 QGATAVFDFVGAQ-----------------------STIDTAQQVVA-------VDGHISVVGIHAG  274 (345)
T ss_dssp             GCEEEEEESSCCH-----------------------HHHHHHHHHEE-------EEEEEEECSCCTT
T ss_pred             CCCeEEEECCCCH-----------------------HHHHHHHHHHh-------cCCEEEEECCCCC
Confidence            2799999999851                       13344555555       4789998876544

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.65  E-value=0.0093  Score=48.46  Aligned_cols=116  Identities=20%  Similarity=0.146  Sum_probs=63.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++.|+|+ |.+|..++..|+..|.  +|++.++++++++.....+....+ .....+..   ++.+.           ..
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a-----------~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE-----------LA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH-----------hC
Confidence            6889998 9999999999999998  999999997766543443332211 01111111   12211           23


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      ..|++|.++|......+ +   -.+.+..|+.-.-.+++.+.++ .       +.+.|+++|....
T Consensus        67 ~aDvVIi~~~~~~~~g~-~---r~dl~~~n~~i~~~i~~~i~~~-~-------p~~~vi~~tNP~~  120 (304)
T 2v6b_A           67 DAQVVILTAGANQKPGE-S---RLDLLEKNADIFRELVPQITRA-A-------PDAVLLVTSNPVD  120 (304)
T ss_dssp             TCSEEEECC----------------CHHHHHHHHHHHHHHHHHH-C-------SSSEEEECSSSHH
T ss_pred             CCCEEEEcCCCCCCCCC-c---HHHHHHhHHHHHHHHHHHHHHh-C-------CCeEEEEecCchH
Confidence            67999999987532211 1   1223445554444444444443 1       3566666665443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.63  E-value=0.0038  Score=53.07  Aligned_cols=73  Identities=21%  Similarity=0.253  Sum_probs=50.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ..++|.|. |.+|..+++.|.++|..|++++++.+..+...    ..    .+.++..|.++++.++++      ...+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~----g~~vi~GDat~~~~L~~a------gi~~A   69 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KF----GMKVFYGDATRMDLLESA------GAAKA   69 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HT----TCCCEESCTTCHHHHHHT------TTTTC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hC----CCeEEEcCCCCHHHHHhc------CCCcc
Confidence            45889987 88999999999999999999999977655432    21    244566777776655443      11244


Q ss_pred             cEEEECCc
Q 027991          112 NILINNAG  119 (216)
Q Consensus       112 d~li~~Ag  119 (216)
                      |++|.+.+
T Consensus        70 ~~viv~~~   77 (413)
T 3l9w_A           70 EVLINAID   77 (413)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            55555444

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.63  E-value=0.0033  Score=50.59  Aligned_cols=40  Identities=28%  Similarity=0.321  Sum_probs=36.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||.++|+|.++-+|..++..|+.+|++|.++.++.
T Consensus       155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            4678999999999988899999999999999999987653

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.62  E-value=0.032  Score=45.83  Aligned_cols=75  Identities=17%  Similarity=0.135  Sum_probs=51.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhc----CCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI----PSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++.|+|+ |.+|..++..|+..|. +|++.++++++++.....+....    ...++... .|   .+.          
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~a----------   79 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN---YEY----------   79 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC---HHH----------
Confidence            57899998 9999999999999998 99999999877765333332221    12233321 22   111          


Q ss_pred             hcCCccEEEECCccCC
Q 027991          107 QHHQLNILINNAGIMG  122 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~  122 (216)
                       ....|++|..+|...
T Consensus        80 -l~~aD~VI~avg~p~   94 (328)
T 2hjr_A           80 -LQNSDVVIITAGVPR   94 (328)
T ss_dssp             -GTTCSEEEECCSCCC
T ss_pred             -HCCCCEEEEcCCCCC
Confidence             136799999999753

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.61  E-value=0.0031  Score=52.32  Aligned_cols=63  Identities=22%  Similarity=0.253  Sum_probs=49.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEEE
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.++|..                   ..+++.+.+.+....|..++....
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            56789999987 8999999999999997 78888532                   245677788888877777777776


Q ss_pred             ccCC
Q 027991           89 LDLS   92 (216)
Q Consensus        89 ~Dv~   92 (216)
                      .+++
T Consensus       113 ~~~~  116 (346)
T 1y8q_A          113 EDIE  116 (346)
T ss_dssp             SCGG
T ss_pred             cccC
Confidence            6654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.57  E-value=0.012  Score=48.15  Aligned_cols=118  Identities=13%  Similarity=0.120  Sum_probs=69.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++.|+|+ |.+|..++..|+.++.  +|++.|++.++++....++....+ ...+.+.. |  +.+           .+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~-----------a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYS-----------DC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------Hh
Confidence            57999998 9999999999999885  899999988777766666655421 11222222 2  222           23


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      ...|++|..+|......+ +   -.+.+..|..    +++...+.+.+.    .+.+.|+++|.-...
T Consensus        71 ~~aDvVii~ag~~~~~g~-~---R~dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~~  126 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPGE-S---RLDLVNKNLN----ILSSIVKPVVDS----GFDGIFLVAANPVDI  126 (318)
T ss_dssp             TTCSEEEECCCC--------------CHHHHHH----HHHHHHHHHHHT----TCCSEEEECSSSHHH
T ss_pred             CCCCEEEECCCCCCCCCC-C---HHHHHHHHHH----HHHHHHHHHHHh----CCCeEEEEeCCcHHH
Confidence            478999999998532211 1   1123344443    344444444432    156778887664443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.57  E-value=0.0029  Score=52.34  Aligned_cols=103  Identities=13%  Similarity=0.020  Sum_probs=65.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +... +  .|.++++ +.+.+.+... .
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~-v--i~~~~~~-~~~~v~~~t~-g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-----GATD-I--INYKNGD-IVEQILKATD-G  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-----TCCE-E--ECGGGSC-HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCce-E--EcCCCcC-HHHHHHHHcC-C
Confidence            5778999985 9999999999999999 799999887655433 222     3221 1  2433322 2222222211 1


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      .++|++|.++|...                       ..+.+++.+.       ++|+++.++...
T Consensus       234 ~g~D~v~d~~g~~~-----------------------~~~~~~~~l~-------~~G~~v~~G~~~  269 (352)
T 3fpc_A          234 KGVDKVVIAGGDVH-----------------------TFAQAVKMIK-------PGSDIGNVNYLG  269 (352)
T ss_dssp             CCEEEEEECSSCTT-----------------------HHHHHHHHEE-------EEEEEEECCCCC
T ss_pred             CCCCEEEECCCChH-----------------------HHHHHHHHHh-------cCCEEEEecccC
Confidence            26999999988520                       2344555555       478999887543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.56  E-value=0.011  Score=48.28  Aligned_cols=88  Identities=15%  Similarity=0.087  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH-------HHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET-------IVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ...+++.|.|. |.+|..+++.|++.|++|++.+|+.++.+...+.       +.+.....++  +-.-+.++..++.++
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDv--Vi~~vp~~~~~~~v~  105 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADI--VVSMLENGAVVQDVL  105 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSE--EEECCSSHHHHHHHH
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCE--EEEECCCHHHHHHHH
Confidence            34567888866 9999999999999999999999998765544321       1111112233  333345566666666


Q ss_pred             H--HHHhhcCCccEEEECCc
Q 027991          102 S--EYNIQHHQLNILINNAG  119 (216)
Q Consensus       102 ~--~~~~~~~~id~li~~Ag  119 (216)
                      .  ++.....+=.++|+...
T Consensus       106 ~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          106 FAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTTCHHHHCCTTCEEEECSC
T ss_pred             cchhHHhhCCCCCEEEecCC
Confidence            5  44444434456666654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.51  E-value=0.0028  Score=51.85  Aligned_cols=39  Identities=33%  Similarity=0.486  Sum_probs=35.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      ++||+|++|++|...++.+...|++|++++++.++.+.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999999999999999998776544

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.51  E-value=0.0042  Score=52.24  Aligned_cols=43  Identities=16%  Similarity=0.085  Sum_probs=37.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      .+.+++++|+|+ |++|..+++.+...|++|++++++.++.+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            467999999996 8999999999999999999999998776544

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.51  E-value=0.0039  Score=50.84  Aligned_cols=74  Identities=20%  Similarity=0.242  Sum_probs=50.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      |+ +||+|++|++|...++.+...|++|+.+++++++.+.+.+ +     +....+   |..+.+.    ++++  ..++
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~vi---~~~~~~~----~~~~--~~~~  211 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L-----GANRIL---SRDEFAE----SRPL--EKQL  211 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H-----TCSEEE---EGGGSSC----CCSS--CCCC
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCCEEE---ecCCHHH----HHhh--cCCC
Confidence            45 9999999999999999999999999999998877655432 2     322222   2222111    1111  1247


Q ss_pred             ccEEEECCcc
Q 027991          111 LNILINNAGI  120 (216)
Q Consensus       111 id~li~~Ag~  120 (216)
                      +|++|.++|.
T Consensus       212 ~d~v~d~~g~  221 (324)
T 3nx4_A          212 WAGAIDTVGD  221 (324)
T ss_dssp             EEEEEESSCH
T ss_pred             ccEEEECCCc
Confidence            8999998873

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.51  E-value=0.012  Score=47.12  Aligned_cols=85  Identities=13%  Similarity=0.087  Sum_probs=55.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEEcCCcchHHHHHHH--------HhhcCCCeEEEEEccCCCHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV---HVVMGVRDIAAGKDVKETI--------VKEIPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~---~Vi~~~r~~~~~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++++|+.++.+...+.+        .......++.++..   .++.+.+
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356888887 9999999999999998   8999999988766654421        11111234444443   3456677


Q ss_pred             HHHHHHhh-cCCccEEEECCc
Q 027991          100 FASEYNIQ-HHQLNILINNAG  119 (216)
Q Consensus       100 ~~~~~~~~-~~~id~li~~Ag  119 (216)
                      +++++... ...=.++|++++
T Consensus        79 vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHhhccCCCeEEEEecC
Confidence            77776554 322227776644

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.50  E-value=0.054  Score=44.00  Aligned_cols=75  Identities=15%  Similarity=0.142  Sum_probs=50.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhh----cCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++.|+|+ |.+|..++..|+..|. +|++.|+++++++.....+...    ....++...    +|.+.          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t----~d~~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT----NNYAD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE----SCGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC----CCHHH----------
Confidence            57899998 9999999999999996 8999999987776544444431    111222211    22211          


Q ss_pred             hcCCccEEEECCccCC
Q 027991          107 QHHQLNILINNAGIMG  122 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~  122 (216)
                       +...|++|..+|...
T Consensus        68 -~~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           68 -TANSDVIVVTSGAPR   82 (309)
T ss_dssp             -GTTCSEEEECCCC--
T ss_pred             -HCCCCEEEEcCCCCC
Confidence             236799999999853

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.48  E-value=0.15  Score=41.56  Aligned_cols=115  Identities=15%  Similarity=0.160  Sum_probs=68.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCC--eEEEEEccCCCHHHHHHHHHHHHh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+++.|+|+ |.+|..++..++.+|.  +|++.|+++++++.....+....+..  ...+.. |  +.+           
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~-----------   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYD-----------   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGG-----------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHH-----------
Confidence            358999998 9999999999998884  79999999775554445554433211  223222 1  211           


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                      .+...|++|.++|....... +..   +.+..|.    -+.+...+.+.+.    .+.+.++++|.
T Consensus        71 al~~aDvViia~~~~~~~g~-~r~---dl~~~n~----~i~~~i~~~i~~~----~p~a~~iv~tN  124 (316)
T 1ldn_A           71 DCRDADLVVICAGANQKPGE-TRL---DLVDKNI----AIFRSIVESVMAS----GFQGLFLVATN  124 (316)
T ss_dssp             GTTTCSEEEECCSCCCCTTT-CSG---GGHHHHH----HHHHHHHHHHHHH----TCCSEEEECSS
T ss_pred             HhCCCCEEEEcCCCCCCCCC-CHH---HHHHcCh----HHHHHHHHHHHHH----CCCCEEEEeCC
Confidence            12368999999998643322 222   1233342    3444444444433    13556666655

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.47  E-value=0.012  Score=49.35  Aligned_cols=84  Identities=15%  Similarity=0.123  Sum_probs=55.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC-----------CHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-----------SLASV   97 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----------~~~~~   97 (216)
                      +.+++++|+|+ |.+|...++.+...|++|++.+++.++++...+ +     +.+  ++..|+.           .++..
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l-----Ga~--~~~l~~~~~~~~gya~~~~~~~~  252 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V-----GAQ--WLDLGIDAAGEGGYARELSEAER  252 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T-----TCE--ECCCC-------------CHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCe--EEeccccccccccchhhhhHHHH
Confidence            57889999999 899999999999999999999999887665433 2     222  2222210           01112


Q ss_pred             HHHHHHHHhhcCCccEEEECCccC
Q 027991           98 RNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        98 ~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      ..-.+.+.+.....|++|.++.+.
T Consensus       253 ~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          253 AQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             hhhHHHHHHHHhcCCEEEECCCCC
Confidence            222233334446889999987664

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.44  E-value=0.0047  Score=51.61  Aligned_cols=47  Identities=19%  Similarity=0.195  Sum_probs=40.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~   75 (216)
                      +++||+++|+|. |.+|..+|+.|.+.|++|++++++.+++++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999987 89999999999999999999998877666555543

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.43  E-value=0.087  Score=42.75  Aligned_cols=115  Identities=21%  Similarity=0.130  Sum_probs=69.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcCCcchHHHHHHHHhh----cCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           33 TAIVTGATSGIGTETARVLALR--GVHVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++.|+|+ |.+|..++..|+..  |++|++.++++++++.....+...    ....++...    +|.++          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~~----------   66 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS----NDYAD----------   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE----SCGGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC----CCHHH----------
Confidence            5789998 99999999999985  789999999987766443333221    011122211    22211          


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                       ....|++|.+++...... .+   -.+.+..|+.-.-.+++.+.++.        +.+.|++++...+
T Consensus        67 -l~~aDvViiav~~p~~~g-~~---r~dl~~~n~~i~~~i~~~i~~~~--------~~~~viv~tNP~~  122 (310)
T 1guz_A           67 -TANSDIVIITAGLPRKPG-MT---REDLLMKNAGIVKEVTDNIMKHS--------KNPIIIVVSNPLD  122 (310)
T ss_dssp             -GTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHHHHHHHHHHHHHC--------SSCEEEECCSSHH
T ss_pred             -HCCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHHhC--------CCcEEEEEcCchH
Confidence             236799999998642211 12   22455556555555555555552        3567777765433

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.43  E-value=0.0036  Score=53.97  Aligned_cols=74  Identities=12%  Similarity=0.188  Sum_probs=57.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      .+++|.|+ |-+|..+|+.|.++|++|++++++++.++...+    .+   .+.++..|.++++.++++=      -...
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~----~~---~~~~i~Gd~~~~~~L~~Ag------i~~a   69 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQD----KY---DLRVVNGHASHPDVLHEAG------AQDA   69 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH----HS---SCEEEESCTTCHHHHHHHT------TTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----hc---CcEEEEEcCCCHHHHHhcC------CCcC
Confidence            36888888 899999999999999999999999776655433    22   3678899999999887651      1256


Q ss_pred             cEEEECCc
Q 027991          112 NILINNAG  119 (216)
Q Consensus       112 d~li~~Ag  119 (216)
                      |.+|...+
T Consensus        70 d~~ia~t~   77 (461)
T 4g65_A           70 DMLVAVTN   77 (461)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEEcC
Confidence            88887555

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.42  E-value=0.039  Score=45.08  Aligned_cols=118  Identities=18%  Similarity=0.174  Sum_probs=69.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++.|+|+ |.+|..++..++..|.  +|++.|+++++++-...++....+  .....+...|  +.+           .+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-----------a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-----------PT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-----------Hh
Confidence            5788996 9999999999999986  899999998776654444543210  1122222111  221           22


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      ..-|++|.++|....+. ++.   .+.+..|+.-    ++...+.+.+.    .+.+.|+++|.-...
T Consensus        68 ~~aDvVii~ag~~~kpG-~~R---~dl~~~N~~i----~~~i~~~i~~~----~p~a~vivvtNPvd~  123 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG-MSR---DDLLAKNTEI----VGGVTEQFVEG----SPDSTIIVVANPLDV  123 (314)
T ss_dssp             TTCSEEEECCCC--------C---HHHHHHHHHH----HHHHHHHHHTT----CTTCEEEECCSSHHH
T ss_pred             CCCCEEEECCCCCCCCC-CCH---HHHHHhhHHH----HHHHHHHHHHh----CCCcEEEecCCchhH
Confidence            36899999999853222 121   2345555543    44444444432    146788888865443

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.41  E-value=0.012  Score=47.65  Aligned_cols=116  Identities=11%  Similarity=0.060  Sum_probs=70.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++.|+|+ |++|..++..|+.++.  ++++.|.++++++-....+....+  +........  .|.++           .
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~-----------~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH-----------h
Confidence            4778895 9999999999998884  799999988666555555554211  111222221  12222           2


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      ..-|++|..||....+. ++.   .+.++.|+.    +++...+.+.+.    .+.+.|+.+|.-.
T Consensus        68 ~~aDvVvitAG~prkpG-mtR---~dLl~~Na~----I~~~i~~~i~~~----~p~aivlvvsNPv  121 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKPG-MTR---LDLAHKNAG----IIKDIAKKIVEN----APESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCCSS-SCH---HHHHHHHHH----HHHHHHHHHHTT----STTCEEEECSSSH
T ss_pred             CCCCEEEEecCCCCCCC-Cch---HHHHHHHHH----HHHHHHHHHHhc----CCceEEEEecCcc
Confidence            36799999999864332 243   334666655    444444444433    1456777777643

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.39  E-value=0.015  Score=47.00  Aligned_cols=80  Identities=14%  Similarity=0.123  Sum_probs=51.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +++.|.||.|.+|.++++.|.+.|++|++++|+.+.  +..+.+    ....+.++..-...   +.++++++......=
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~----~~aDvVilavp~~~---~~~vl~~l~~~l~~~   92 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESIL----ANADVVIVSVPINL---TLETIERLKPYLTEN   92 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHH----TTCSEEEECSCGGG---HHHHHHHHGGGCCTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHh----cCCCEEEEeCCHHH---HHHHHHHHHhhcCCC
Confidence            568899989999999999999999999999988653  111111    13456555554333   566666665433221


Q ss_pred             cEEEECCcc
Q 027991          112 NILINNAGI  120 (216)
Q Consensus       112 d~li~~Ag~  120 (216)
                      .+++..+++
T Consensus        93 ~iv~~~~sv  101 (298)
T 2pv7_A           93 MLLADLTSV  101 (298)
T ss_dssp             SEEEECCSC
T ss_pred             cEEEECCCC
Confidence            255555543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.38  E-value=0.0069  Score=48.67  Aligned_cols=40  Identities=35%  Similarity=0.415  Sum_probs=36.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||.++|.|.++-.|..++..|+..|++|.++.++.
T Consensus       156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            4678999999999988899999999999999999987653

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.37  E-value=0.0085  Score=47.47  Aligned_cols=40  Identities=25%  Similarity=0.282  Sum_probs=34.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKD   70 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~   70 (216)
                      +++ +++|.|+ ||.|.+++..|.+.|+ +|++++|+.+++++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~  147 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA  147 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            567 8999987 9999999999999998 89999999766543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.34  E-value=0.0084  Score=47.96  Aligned_cols=36  Identities=14%  Similarity=0.076  Sum_probs=33.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      ++||.++|.|.++-.|..+++.|...|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999998889999999999999999998764

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.32  E-value=0.099  Score=42.47  Aligned_cols=115  Identities=16%  Similarity=0.226  Sum_probs=69.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhh---c-CCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE---I-PSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~---~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++.|+|+ |.+|..++..++.+|. +|++.|+++++++....++...   . ...++... .|   .+.           
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~a-----------   64 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---YED-----------   64 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GGG-----------
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---HHH-----------
Confidence            3778998 9999999999998887 7999999987776555555442   1 12223221 22   211           


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +...|++|..+|....+.. +-.   +.+..|..    +.+...+.+.+.    .+.+.||++|.-..
T Consensus        65 ~~~aD~Vi~~ag~~~k~G~-~r~---dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~  120 (308)
T 2d4a_B           65 MRGSDIVLVTAGIGRKPGM-TRE---QLLEANAN----TMADLAEKIKAY----AKDAIVVITTNPVD  120 (308)
T ss_dssp             GTTCSEEEECCSCCCCSSC-CTH---HHHHHHHH----HHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             hCCCCEEEEeCCCCCCCCC-cHH---HHHHHHHH----HHHHHHHHHHHH----CCCeEEEEeCCchH
Confidence            2368999999998643322 222   23334433    444444444432    14677888776443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.32  E-value=0.028  Score=44.28  Aligned_cols=77  Identities=13%  Similarity=0.130  Sum_probs=56.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++.|.|++|.+|..+++.+.+. +++|+......+.+++..    ..  ...   +..|++.++...+.+..+.+.  ++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~--~~D---vvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DG--NTE---VVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HT--TCC---EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----cc--CCc---EEEEccChHHHHHHHHHHHHc--CC
Confidence            5899999999999999999876 888876654444444322    11  222   567999999998888876654  78


Q ss_pred             cEEEECCcc
Q 027991          112 NILINNAGI  120 (216)
Q Consensus       112 d~li~~Ag~  120 (216)
                      +++|.+.|.
T Consensus        71 ~~VigTTG~   79 (245)
T 1p9l_A           71 HAVVGTTGF   79 (245)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEcCCCC
Confidence            999988885

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.31  E-value=0.053  Score=44.22  Aligned_cols=73  Identities=19%  Similarity=0.272  Sum_probs=50.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC---CCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++.|+|+ |.+|..++..|+..|.  +|++.++++++++.....+....+   ..++.   .  ++.+.    +      
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~--~d~~~----~------   65 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---A--GDYAD----L------   65 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---E--CCGGG----G------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---e--CCHHH----h------
Confidence            5789998 9999999999999998  999999998776655444432211   11221   1  23221    1      


Q ss_pred             cCCccEEEECCccCC
Q 027991          108 HHQLNILINNAGIMG  122 (216)
Q Consensus       108 ~~~id~li~~Ag~~~  122 (216)
                       ...|++|.+++...
T Consensus        66 -~~aDvViiav~~~~   79 (319)
T 1a5z_A           66 -KGSDVVIVAAGVPQ   79 (319)
T ss_dssp             -TTCSEEEECCCCCC
T ss_pred             -CCCCEEEEccCCCC
Confidence             26799999998754

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.30  E-value=0.014  Score=49.99  Aligned_cols=79  Identities=18%  Similarity=0.179  Sum_probs=54.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..++++|+++|.|. |+.|.++|+.|.++|++|.+.|++........+.+...  +.  .+....-.  +.   .     
T Consensus         4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~--gi--~~~~g~~~--~~---~-----   68 (451)
T 3lk7_A            4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE--GI--KVVCGSHP--LE---L-----   68 (451)
T ss_dssp             CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT--TC--EEEESCCC--GG---G-----
T ss_pred             hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC--CC--EEEECCCh--HH---h-----
Confidence            34578999999999 88999999999999999999998764333344455543  32  33322211  11   1     


Q ss_pred             hhcCC-ccEEEECCccC
Q 027991          106 IQHHQ-LNILINNAGIM  121 (216)
Q Consensus       106 ~~~~~-id~li~~Ag~~  121 (216)
                        ... .|.+|.+.|+.
T Consensus        69 --~~~~~d~vv~spgi~   83 (451)
T 3lk7_A           69 --LDEDFCYMIKNPGIP   83 (451)
T ss_dssp             --GGSCEEEEEECTTSC
T ss_pred             --hcCCCCEEEECCcCC
Confidence              113 89999999984

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.30  E-value=0.0037  Score=51.33  Aligned_cols=72  Identities=15%  Similarity=0.122  Sum_probs=54.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .+.++|.|+ |.+|..+++.|.++|. |++++++++..+ ..    .    ..+.++..|.+|++.++++      ...+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~----~~~~~i~gd~~~~~~L~~a------~i~~  177 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R----SGANFVHGDPTRVSDLEKA------NVRG  177 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H----TTCEEEESCTTSHHHHHHT------CSTT
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h----CCcEEEEeCCCCHHHHHhc------Chhh
Confidence            457999997 9999999999999999 999999877654 22    1    2467889999998887754      1125


Q ss_pred             ccEEEECCc
Q 027991          111 LNILINNAG  119 (216)
Q Consensus       111 id~li~~Ag  119 (216)
                      .|.+|...+
T Consensus       178 a~~vi~~~~  186 (336)
T 1lnq_A          178 ARAVIVDLE  186 (336)
T ss_dssp             EEEEEECCS
T ss_pred             ccEEEEcCC
Confidence            677776554

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.30  E-value=0.069  Score=43.68  Aligned_cols=75  Identities=15%  Similarity=0.154  Sum_probs=51.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhh----cCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++.|+|+ |.+|..++..|+..|. +|++.|+++++++.....+...    ....++...    +|.+.          
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~a----------   69 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS----NTYDD----------   69 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE----CCGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC----CCHHH----------
Confidence            57899998 9999999999999998 8999999988776544444332    112222221    22211          


Q ss_pred             hcCCccEEEECCccCC
Q 027991          107 QHHQLNILINNAGIMG  122 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~  122 (216)
                       +...|++|..+|...
T Consensus        70 -l~~aD~Vi~a~g~p~   84 (322)
T 1t2d_A           70 -LAGADVVIVTAGFTK   84 (322)
T ss_dssp             -GTTCSEEEECCSCSS
T ss_pred             -hCCCCEEEEeCCCCC
Confidence             236799999999753

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.29  E-value=0.025  Score=43.16  Aligned_cols=77  Identities=13%  Similarity=0.203  Sum_probs=50.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++..+++.|.| .|.+|.++++.|++.|++|++.+|+++           .....++.++.+.   ...++++++++..
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av~---~~~~~~v~~~l~~   79 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAVP---YPALAALAKQYAT   79 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECSC---HHHHHHHHHHTHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcCC---cHHHHHHHHHHHH
Confidence            345677899999 599999999999999999999999865           1113455555443   5667777777654


Q ss_pred             hcCCccEEEECCc
Q 027991          107 QHHQLNILINNAG  119 (216)
Q Consensus       107 ~~~~id~li~~Ag  119 (216)
                      ... =.++|+.+.
T Consensus        80 ~~~-~~~vi~~~~   91 (209)
T 2raf_A           80 QLK-GKIVVDITN   91 (209)
T ss_dssp             HHT-TSEEEECCC
T ss_pred             hcC-CCEEEEECC
Confidence            433 135555543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.28  E-value=0.058  Score=43.44  Aligned_cols=39  Identities=23%  Similarity=0.160  Sum_probs=34.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      +++.|.|+ |.+|..+|..|+..|++|++.++++++++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            57889988 9999999999999999999999998776654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.24  E-value=0.0077  Score=48.40  Aligned_cols=39  Identities=28%  Similarity=0.354  Sum_probs=35.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      ..+++||.++|.|.++-.|..+++.|...|++|.++.++
T Consensus       156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            467899999999998889999999999999999988664

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.24  E-value=0.04  Score=45.82  Aligned_cols=88  Identities=14%  Similarity=0.153  Sum_probs=54.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHH----------HHHHhhcCCCeEEEEEccCCCHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK----------ETIVKEIPSAKVDAMELDLSSLASVR   98 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~----------~~~~~~~~~~~~~~~~~Dv~~~~~~~   98 (216)
                      ++++++.|.| .|.+|..+++.|++.|++|++.+|+.++.+...          +++....+..++.++..  .+. .++
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~v--p~~-~v~   95 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMV--PAA-VVD   95 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECS--CGG-GHH
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeC--CHH-HHH
Confidence            5567888887 499999999999999999999999977655432          12222111123433332  232 566


Q ss_pred             HHHHHHHhhcCCccEEEECCcc
Q 027991           99 NFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        99 ~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      ++++++......=+++|.....
T Consensus        96 ~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           96 SMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHhhCCCCCEEEeCCCC
Confidence            6666665544444566665543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.20  E-value=0.0093  Score=48.30  Aligned_cols=40  Identities=25%  Similarity=0.350  Sum_probs=36.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||.++|.|.++-.|..+++.|...|++|.++.|+.
T Consensus       160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            4678999999999988899999999999999999988743

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.18  E-value=0.012  Score=47.34  Aligned_cols=40  Identities=33%  Similarity=0.401  Sum_probs=36.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||.++|.|++.-+|..+++.|...|++|.++.++.
T Consensus       154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  193 (288)
T 1b0a_A          154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT  193 (288)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            5679999999999988899999999999999999987664

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.16  E-value=0.085  Score=45.52  Aligned_cols=80  Identities=9%  Similarity=0.081  Sum_probs=51.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-----CCeEEEEEcCCcchHHHHHHHHh---hc-CCCeEEEEEccCCCHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALR-----GVHVVMGVRDIAAGKDVKETIVK---EI-PSAKVDAMELDLSSLASVR   98 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~-----g~~Vi~~~r~~~~~~~~~~~~~~---~~-~~~~~~~~~~Dv~~~~~~~   98 (216)
                      +|+.+++.|.||+++.|.+++..|+.+     +.+|++.++++++++...+....   .. ...++...    +|.   +
T Consensus        25 ~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t----~D~---~   97 (472)
T 1u8x_X           25 KKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT----TDP---E   97 (472)
T ss_dssp             -CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE----SCH---H
T ss_pred             ccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE----CCH---H
Confidence            345568889999888899999889888     66899999998776553322111   11 12233321    232   1


Q ss_pred             HHHHHHHhhcCCccEEEECCccC
Q 027991           99 NFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        99 ~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      +.+       ..-|++|..+|..
T Consensus        98 eal-------~~AD~VViaag~~  113 (472)
T 1u8x_X           98 EAF-------TDVDFVMAHIRVG  113 (472)
T ss_dssp             HHH-------SSCSEEEECCCTT
T ss_pred             HHH-------cCCCEEEEcCCCc
Confidence            222       2679999999974

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.16  E-value=0.029  Score=45.15  Aligned_cols=84  Identities=15%  Similarity=0.105  Sum_probs=57.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH-------HHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET-------IVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +++.|.|. |.+|..+++.|++.|++|++.+|+.++.+...+.       +.+...   ..++-.-+.++..+++.++++
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~---aDvvi~~vp~~~~~~~v~~~l   91 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA---ADLIHITVLDDAQVREVVGEL   91 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT---SSEEEECCSSHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh---CCEEEEECCChHHHHHHHHHH
Confidence            45777774 9999999999999999999999998887665431       111111   233444455677788777777


Q ss_pred             HhhcCCccEEEECCc
Q 027991          105 NIQHHQLNILINNAG  119 (216)
Q Consensus       105 ~~~~~~id~li~~Ag  119 (216)
                      ......=.++|+...
T Consensus        92 ~~~l~~g~ivv~~st  106 (296)
T 3qha_A           92 AGHAKPGTVIAIHST  106 (296)
T ss_dssp             HTTCCTTCEEEECSC
T ss_pred             HHhcCCCCEEEEeCC
Confidence            665544456776655

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.13  E-value=0.026  Score=45.16  Aligned_cols=40  Identities=15%  Similarity=0.128  Sum_probs=35.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      +++.|.|++|.+|..+++.|.+.|++|++++|+.++.+..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~   51 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRL   51 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            4799999999999999999999999999999987665544

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.13  E-value=0.12  Score=42.04  Aligned_cols=40  Identities=18%  Similarity=0.130  Sum_probs=34.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDV   71 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~   71 (216)
                      .+++.|+|+ |.+|..++..|+..|. +|++.++++++++..
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            357899998 9999999999999998 999999998776653

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.12  E-value=0.0057  Score=50.08  Aligned_cols=41  Identities=17%  Similarity=0.178  Sum_probs=36.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~   67 (216)
                      ...+.||++.|.|. |.||.++|+.+...|.+|+..+|+.+.
T Consensus       134 ~~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~  174 (315)
T 3pp8_A          134 EYTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKS  174 (315)
T ss_dssp             CCCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCC
T ss_pred             CCCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence            35688999999987 999999999999999999999988653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.11  E-value=0.0098  Score=48.12  Aligned_cols=42  Identities=29%  Similarity=0.289  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~   69 (216)
                      .++.+++++|.|+ |+||.++++.+...|++|++.+|+.++.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            4688999999997 99999999999999999999999875543

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.09  E-value=0.04  Score=46.07  Aligned_cols=71  Identities=13%  Similarity=0.078  Sum_probs=51.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..+.+|+++|.|+ |.+|..+++.+.+.|.+|++++.+......          ...-..+..|..|.+.+.++++    
T Consensus        10 ~~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~----------~~ad~~~~~~~~d~~~l~~~~~----   74 (389)
T 3q2o_A           10 IILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCA----------QVADIEIVASYDDLKAIQHLAE----   74 (389)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTT----------TTCSEEEECCTTCHHHHHHHHH----
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchH----------HhCCceEecCcCCHHHHHHHHH----
Confidence            3468899999987 569999999999999999999876543110          0111245578888888877775    


Q ss_pred             hcCCccEEE
Q 027991          107 QHHQLNILI  115 (216)
Q Consensus       107 ~~~~id~li  115 (216)
                         ..|++.
T Consensus        75 ---~~dvI~   80 (389)
T 3q2o_A           75 ---ISDVVT   80 (389)
T ss_dssp             ---TCSEEE
T ss_pred             ---hCCEee
Confidence               357663

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.06  E-value=0.024  Score=45.34  Aligned_cols=85  Identities=12%  Similarity=0.022  Sum_probs=54.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH-------HHhhcCCCeEEEEEccCCCHHHHHHHH---
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET-------IVKEIPSAKVDAMELDLSSLASVRNFA---  101 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~~~~~~---  101 (216)
                      +++.|.|. |.+|..+++.|++.|++|++.+|+.++.+...+.       +.+.....+  ++-.-+.++..+++.+   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aD--vvi~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCP--VTFAMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCS--EEEECCSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCC--EEEEEcCCHHHHHHHHcCc
Confidence            46788875 9999999999999999999999998877655431       000000122  3333445566777776   


Q ss_pred             HHHHhhcCCccEEEECCc
Q 027991          102 SEYNIQHHQLNILINNAG  119 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag  119 (216)
                      +++......=.++|+..+
T Consensus        79 ~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             chHhhcCCCCCEEEeCCC
Confidence            555544433356666654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	216
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-28
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-27
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-25
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-24
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-23
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-22
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-22
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-21
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-21
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-20
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-20
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-20
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	7e-20
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-19
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-19
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-19
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-19
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-19
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	6e-19
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-18
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-18
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	4e-18
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	5e-18
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-18
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	8e-18
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-17
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-17
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-16
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-16
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-16
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-16
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	9e-16
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-15
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-15
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-15
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-15
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-15
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-14
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-14
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-14
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-13
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-13
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-13
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-13
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-13
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-13
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-13
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-13
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-13
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	8e-13
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-12
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-12
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-12
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	4e-12
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	5e-12
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-11
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-11
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-10
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-09
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-09
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-09
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-07
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	7e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-06
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-06
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	9e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	6e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-04
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.003
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.003
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.004

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 2e-28
 Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 5/142 (3%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA+ GIG   AR L  +G+ VV   R +   +++            +     DLS
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
           +   + +  S    QH  ++I INNAG+    T    S    +  F  N L   + T   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 151 LDTMKKTARKSGGEGRIINVSS 172
             +MK+   ++  +G IIN++S
Sbjct: 132 YQSMKE---RNVDDGHIININS 150

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 4e-27
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 10/153 (6%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           ++G    A+VTGA  GIG   A  L L+G  V +   ++ AG   K  + ++    K   
Sbjct: 1   VNGK--VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 58

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLL 146
           ++ D++    +R+   +      +L+IL+NNAG+       ++ N E     N +     
Sbjct: 59  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISG 112

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
           T L LD M K  +  G  G IIN+SS    +  
Sbjct: 113 TYLGLDYMSK--QNGGEGGIIINMSSLAGLMPV 143

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (242), Expect = 3e-25
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 12/148 (8%)

Query: 34  AIVTGATSGIGTETARVLA-LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           A+VTG   GIG    R L  L    VV+  RD+  G+   + +  E         +LD+ 
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDID 63

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLL 150
            L S+R        ++  L++L+NNAGI              E+   TN  G   +   L
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123

Query: 151 LDTMKKTARKSGGEGRIINVSSEGHRLA 178
           L  +K        +GR++NVSS     A
Sbjct: 124 LPLIKP-------QGRVVNVSSIMSVRA 144

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.5 bits (232), Expect = 5e-24
 Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 9/152 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   ++TGA  GIG  TA   A     +V+   +    ++           AKV    +
Sbjct: 6   TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVV 63

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHFLLT 147
           D S+   + + A +   +   ++IL+NNA        F      IE  F  N L HF  T
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 123

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
              L  M K        G I+ V+S    ++ 
Sbjct: 124 KAFLPAMTK-----NNHGHIVTVASAAGHVSV 150

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 90.7 bits (224), Expect = 8e-23
 Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 14/177 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           S  + +VTGA  GIG    + L       H++   RD+    +     +K I  ++V  +
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVL 56

Query: 88  ELDLSSLASVRNFASEYN--IQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLG 142
            L ++   S+  F S+    +    L++LINNAG++   GT    ++  I  Q   N   
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSA 199
             LLT  LL  +K     S   G  ++VS                    S  F   A
Sbjct: 117 VVLLTQKLLPLLKN--AASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLA 171

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 88.9 bits (220), Expect = 3e-22
 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 11/154 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           +   AI+TG+++GIG  TA + A  G  V +  R     ++ ++ I+   +    V+++ 
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIM------GTPFMLSKDNIELQFATNHLG 142
            D+++ A      S    +  +L+IL+NNAG         T    S ++ +     N   
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
              LT   +  +  T     GE   I+  + G  
Sbjct: 124 VIALTKKAVPHLSST----KGEIVNISSIASGLH 153

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 88.1 bits (218), Expect = 7e-22
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 13/153 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG  SG+G E  ++L   G  V     + AAG+ +   +       +   +  
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRH 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D+SS A      +    +   LN+L+NNAGI+  G       ++       N    F+  
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
              +  MK+T       G IIN++S    L   
Sbjct: 120 QQGIAAMKETG------GSIINMASVSSWLPIE 146

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.9 bits (215), Expect = 2e-21
 Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 15/154 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG   GIG    R     G  VV+  +D + G+ +++ +           +  
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILC 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNA---GIMGTPFMLSKDNIELQFATNHLGHFLL 146
           D++    V+   SE   +  +L+ ++NNA        P   S          N LG + L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
           T L L  ++K       +G +IN+SS    +   
Sbjct: 119 TKLALPYLRK------SQGNVINISSLVGAIGQA 146

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 86.1 bits (213), Expect = 3e-21
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 11/152 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               A++TG  +GIG   A   A+ G  +   + D+    + +  I       +V  ++ 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIA--IADLVPAPEAEAAI--RNLGRRVLTVKC 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM-GTPFM-LSKDNIELQFATNHLGHFLLT 147
           D+S    V  F  +      + +IL+NNAGI    PF  L+ +  +  F  N    FL+ 
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 119

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
              +  MK+      G GRIIN++S  + L  
Sbjct: 120 KAFVPGMKR-----NGWGRIINLTSTTYWLKI 146

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 84.7 bits (209), Expect = 1e-20
 Identities = 40/155 (25%), Positives = 60/155 (38%), Gaps = 10/155 (6%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           +D +    I   A  GIG +T+R L  R +   + +  +     + E      P   +  
Sbjct: 1   MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITF 59

Query: 87  MELDLS-SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFL 145
              D++  +A  +    +   Q   ++ILIN AGI+          IE   A N  G   
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVN 113

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
            T  +LD   K  RK G  G I N+ S     A H
Sbjct: 114 TTTAILDFWDK--RKGGPGGIIANICSVTGFNAIH 146

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 83.0 bits (205), Expect = 4e-20
 Identities = 37/145 (25%), Positives = 55/145 (37%), Gaps = 15/145 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTG   GIG   A+  A  G  V +       GK+V E I            ++
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEAI-------GGAFFQV 55

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           DL        F  E      ++++L+NNA I   G+   +           N      L+
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
            L    M+K      G G I+NV+S
Sbjct: 116 ALAAREMRK-----VGGGAIVNVAS 135

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 82.8 bits (204), Expect = 6e-20
 Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 10/156 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              T +VTG T GIG       A  G  +    R+     +      K+    +V     
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVC 64

Query: 90  DLSSLASVRNFASEYNIQHH-QLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHFLL 146
           D S            +     +L+ILINN G +   P +  + ++     +TN    + L
Sbjct: 65  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 124

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG 182
           + L    +K +     G G II +SS    ++   G
Sbjct: 125 SQLAHPLLKAS-----GCGNIIFMSSIAGVVSASVG 155

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 83.1 bits (205), Expect = 7e-20
 Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 11/154 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           S  T I+TG+++GIG  TA + A  G +V +  R     ++ ++ I+K  +   +V+++ 
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLG 142
            D+++        +    Q  ++++L+NNAG         T      D        N   
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
              +T  +   +  +     GE   ++    G +
Sbjct: 124 VIEMTKKVKPHLVAS----KGEIVNVSSIVAGPQ 153

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 2e-19
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---AKVDA 86
            G  AIVTG  +GIG    + L   G +VV+  R +   K   + +   +P    A+V  
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHF 144
           ++ ++ +   V N          ++N L+NN G   +     +S         TN  G F
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 130

Query: 145 LLTNLLLDTM 154
            +   +  + 
Sbjct: 131 YMCKAVYSSW 140

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 81.3 bits (200), Expect = 2e-19
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 3/158 (1%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           I     T IVTG   GIG    R +A  G +V +  R  A   +V E + KE    K  A
Sbjct: 5   ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKA 63

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLL 146
            + D+S+   V     + +     ++ LI NA    +    + +     FA  +  +   
Sbjct: 64  YQCDVSNTDIVTKTIQQIDADLGPISGLIANA--GVSVVKPATELTHEDFAFVYDVNVFG 121

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR 184
                  + K   +   +G I+  SS   ++     + 
Sbjct: 122 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN 159

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 81.2 bits (200), Expect = 2e-19
 Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 12/153 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG T I+TG   G+G E AR     G  VV+       G      +             L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHL 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           D++     +   +    +   ++ L+NNAGI         S +        N  G F+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
             ++  MK       G G I+N+SS    +   
Sbjct: 119 KTVIPAMKD-----AGGGSIVNISSAAGLMGLA 146

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 80.8 bits (199), Expect = 3e-19
 Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 9/150 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG + GIG      LA  G  V    R+     D       +    KV+A   
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 64

Query: 90  DLSSLASVRNFASE-YNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLL 146
           DLSS +  +   +   N  H +LNIL+NNAGI+        + ++  L  + N    + L
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 124

Query: 147 TNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
           + L    +K     S     +   S  G  
Sbjct: 125 SVLAHPFLK----ASERGNVVFISSVSGAL 150

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.6 bits (201), Expect = 4e-19
 Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 13/158 (8%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD-----IAAGKDVKETIVKEIPSAKV 84
            G   +VTGA  G+G   A   A RG  VV+         +  G    + +V+EI   + 
Sbjct: 6   DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRG 64

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLG 142
                +  S+ +             ++++++NNAGI+   +   +S ++ ++    +  G
Sbjct: 65  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
            F +T    D MKK        GRII  +S        
Sbjct: 125 SFQVTRAAWDHMKK-----QNYGRIIMTASASGIYGNF 157

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 80.0 bits (197), Expect = 6e-19
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 9/152 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  AI+TG T GIG   A      G  V++  R    G+   +++       ++   + 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQH 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFM--LSKDNIELQFATNHLGHFLLT 147
           D S                  ++ L+NNAGI     +   +        A N  G F  T
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
            L +  M    +  G    IIN+SS    +  
Sbjct: 122 RLGIQRM----KNKGLGASIINMSSIEGFVGD 149

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 78.9 bits (194), Expect = 2e-18
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 1/92 (1%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG + G+G   A+ LA  G  VV+  R++    +  + + ++    +  A   
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRC 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           D+S+   V+        +  +L+ ++N AGI 
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN 94

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.5 bits (193), Expect = 2e-18
 Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 16/155 (10%)

Query: 27  IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
           ++ SGL A+VTGA  GIG +T + L   G  VV   R  +    + +          ++ 
Sbjct: 1   LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEP 54

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHF 144
           + +DL    +              +++L+NNA +  M     ++K+  +  F+ N    F
Sbjct: 55  VCVDLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 110

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
            ++ ++     +     G  G I+NVSS    + +
Sbjct: 111 QVSQMVA----RDMINRGVPGSIVNVSSMVAHVTF 141

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 78.2 bits (192), Expect = 4e-18
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE-IPSAKVDAME 88
           SG + I+TG+++GIG   A + A  G  V +  R+    ++ K+ I+K  +P+ K++A+ 
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 89  LDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML----SKDNIELQFATNHLGHF 144
            D++  +   +  +    +  +++IL+NNAG              +  +  F  N     
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 145 LL 146
            +
Sbjct: 123 EM 124

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 77.9 bits (191), Expect = 5e-18
 Identities = 23/92 (25%), Positives = 41/92 (44%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +    ++TG  SG+G  TA  LA  G  + +        +  K  +++  P A+V     
Sbjct: 3   TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM 121
           D+S  A V  + +    +  +++   NNAGI 
Sbjct: 63  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIE 94

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 78.1 bits (192), Expect = 5e-18
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 17/154 (11%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   ++TG  SG+G          G  V +  +      +++           V  +  
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVG 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLG 142
           D+ SL   +  AS    +  +++ LI NAGI          P        +  F  N  G
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 143 HFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
           +       L  +            I  +S+ G  
Sbjct: 119 YIHAVKACLPALVA-----SRGNVIFTISNAGFY 147

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 77.0 bits (189), Expect = 8e-18
 Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 11/119 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           TAIVT      G  +A  L+  G  V                   E+ +      +L   
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ--------KDELEAFAETYPQLKPM 53

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMG--TPFM-LSKDNIELQFATNHLGHFLLTN 148
           S              + Q+++L++N        P    + ++         +  F L N
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 112

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 76.2 bits (187), Expect = 2e-17
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 24  TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAK 83
           +D +   G  AI+TGA +GIG E A   A  G  VV+   +  A   V + I +     +
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQ 61

Query: 84  VDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLG 142
             A   D++S   +   A     +  +++IL+NNAG  G  PF +   +    +  N   
Sbjct: 62  AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFS 121

Query: 143 HFL 145
            F 
Sbjct: 122 FFH 124

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 75.9 bits (186), Expect = 3e-17
 Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 9/147 (6%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
               AI+TG   GIG  TA++    G  VV+       G+ V   I        +  +  
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGT----PFMLSKDNIELQFATNHLGHFL 145
           D++    VRN       +H +L+I+  N G++ T          ++ +     N  G FL
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
           +       M     K G      ++SS
Sbjct: 122 VAKHAARVMIP--AKKGSIVFTASISS 146

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 74.1 bits (181), Expect = 1e-16
 Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 14/150 (9%)

Query: 25  DGIDGSGLTAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPS 81
           DG+  +    ++TGA+ G G   A  LA     G  +++  R  +  + +KE +  + P 
Sbjct: 2   DGLGCA--VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD 59

Query: 82  AKVDAMELDLSSLASVRNFASEY----NIQHHQLNILINNAGIMGTPFM-----LSKDNI 132
            KV     DL + A V+   S        +  Q  +LINNA  +G              +
Sbjct: 60  LKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV 119

Query: 133 ELQFATNHLGHFLLTNLLLDTMKKTARKSG 162
              +A N      LT+  L+  + +   S 
Sbjct: 120 NNYWALNLTSMLCLTSGTLNAFQDSPGLSK 149

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 2e-16
 Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 16/149 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA  GIG  T + L   G  VV   R  A      +++V+E P   ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECP--GIEPVCV 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           DL    +              +++L+NNA +        ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHR 176
            ++     +     G  G I+NVSS+  +
Sbjct: 116 QIVA----RGLIARGVPGAIVNVSSQCSQ 140

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 73.1 bits (179), Expect = 2e-16
 Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 14/149 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                ++TGA  GIG  T  + A  G  +V    +    ++  E +           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLT 147
           D++  ASV    +E      +L+ +++ AG       + +  ++ EL    N  G FL+ 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHR 176
               + M++        G I+  +S  + 
Sbjct: 117 KAASEAMRE-----KNPGSIVLTASRVYL 140

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 72.0 bits (176), Expect = 5e-16
 Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 7/129 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G  A+V+G   G+G    R +   G  VV G      GK +   +     +     + L
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHL 59

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML--SKDNIELQFATNHLGHFLLT 147
           D++  A  +            L++L+NNAGI+    +   +    +     N  G FL  
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 148 NLLLDTMKK 156
             ++  MK+
Sbjct: 120 RAVVKPMKE 128

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 9e-16
 Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 9/152 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   IVTGA+ GIG E A  LA  G HVV+  R     + V    + E+ +A    +  
Sbjct: 13  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAG 71

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
            +  +     F ++       L++LI N         F     ++      N L + +LT
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 131

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
              L  +K+        G I+ VSS   ++AY
Sbjct: 132 VAALPMLKQ------SNGSIVVVSSLAGKVAY 157

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 71.3 bits (174), Expect = 1e-15
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 12/151 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
           +G  A+ TGA  GIG   A  L  RG  VV+            E +V E+     +  A+
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQGVAI 61

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFL 145
           + D+S  + V     +       L+ +++N+G+        ++++  +  F  N  G F 
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 121

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSSEGHR 176
           +    L   ++     GG   + +  +    
Sbjct: 122 VAQQGLKHCRR-----GGRIILTSSIAAVMT 147

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 1e-15
 Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 3/151 (1%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A +TG  +G+G     +L+  G   V+  R +   K   E I  +  + KV A++ 
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQC 82

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D+     V+N  SE        NI+INNA   G     ++      + T        T  
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAF 140

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
           +   + K   K+      +++++        
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSG 171

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (173), Expect = 2e-15
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 9/150 (6%)

Query: 34  AIVTGATSGIGTETARVLALRG---VHVVMGVRDIAAGKDVKETIVK-EIPSAKVDAMEL 89
            ++TG +SGIG   A  LA        V   +RD+     + E       P   ++ ++L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D+    SV             + +     G++G    L +D +      N +G   +   
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
            L  MK+      G GR++   S G  +  
Sbjct: 125 FLPDMKR-----RGSGRVLVTGSVGGLMGL 149

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 70.0 bits (171), Expect = 3e-15
 Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 5/140 (3%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA  GIG E A++LA    HV+   R   +   V + I       +      D+S
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVS 69

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
               +    ++   +H  ++IL+NNAGI      L   N E +     L   L +   + 
Sbjct: 70  KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWED---VLRTNLNSLFYIT 126

Query: 153 TMKKTARKSGGEGRIINVSS 172
                   +   GRIIN+SS
Sbjct: 127 QPISKRMINNRYGRIINISS 146

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 69.8 bits (170), Expect = 3e-15
 Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 16/155 (10%)

Query: 34  AIVTGATSGIGTETARVLALRGVH-------VVMGVRDIAAGKDVKETIVKEIPSAKVDA 86
            ++TGA  GIG   A   A    H       +V+  R  A  + +      E   A  D 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDT 61

Query: 87  MELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHF 144
           +  D+S +A VR   +    ++  ++ L+NNAG+   G    L++++ +    TN  G F
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 145 LLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
            LT  L   M++        G I  ++S     A+
Sbjct: 122 FLTQALFALMER-----QHSGHIFFITSVAATKAF 151

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 67.8 bits (165), Expect = 2e-14
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 12/143 (8%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAMELDL 91
            +VTGA+ GIG   A  L   G  V++            E + K+I +   +      D+
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYAR---SAKAAEEVSKQIEAYGGQAITFGGDV 60

Query: 92  SSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN--HLGHFLLTNL 149
           S  A V             +++++NNAGI     ++     +     +    G FL T  
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
               M K       +GRIIN++S
Sbjct: 121 ATKIMMK-----KRKGRIINIAS 138

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 67.5 bits (164), Expect = 2e-14
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 12/153 (7%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTGA+ GIG   A  LA RG  V+         + + + +      A    + L
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLML 57

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQF--ATNHLGHFLLT 147
           +++  AS+ +   +   +  +++IL+NNAGI     ++   + E      TN    F L+
Sbjct: 58  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
             ++  M K        GRII + S    +   
Sbjct: 118 KAVMRAMMK-----KRHGRIITIGSVVGTMGNG 145

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 66.8 bits (162), Expect = 5e-14
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
            A+VTGA  GIG   A  L   G  V +   + A  K V   I +        A+++D+S
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 60

Query: 93  SLASVRNFASEYNIQHHQLNILINNAG--IMGTPFMLSKDNIELQFATNHLGHFLLTNLL 150
               V     +        ++++NNAG         ++ + ++  +  N  G        
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 151 LDTMKK 156
           ++  KK
Sbjct: 121 VEAFKK 126

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 65.5 bits (159), Expect = 1e-13
 Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 7/129 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G   ++TG+++G+G   A   A     VV+  R     +D   ++++EI     +  A+
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGEAIAV 62

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFL 145
           + D++  + V N       +  +L+++INNAG+    +   +S  +      TN  G FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 146 LTNLLLDTM 154
            +   +   
Sbjct: 123 GSREAIKYF 131

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 65.1 bits (158), Expect = 2e-13
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 4/117 (3%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
              A+VTGATSGIG E AR L   G+ V +  R     +   + + +     + D    D
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCD 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFL 145
           + S+  +    +    ++  +++L+NNAG    G    L+ +       TN  G F 
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFR 116

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 65.1 bits (158), Expect = 2e-13
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 16/151 (10%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
              + +VTG   GIG   A+ LA  G  V +  R   A K +               +E+
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEV 52

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           D++   +V    +        + +L++NAG+    F++     + +   N          
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV- 111

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
                   + +    GR+I + S        
Sbjct: 112 --AQRASRSMQRNKFGRMIFIGSVSGLWGIG 140

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 2e-13
 Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 18/145 (12%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G   I+T A  GIG   A   A  G  V+    + +  ++     +++ P  +   ++ 
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLD- 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGI--MGTPFMLSKDNIELQFATNHLGHFLLT 147
                 + +    ++  +  +L++L N AG    GT     + + +     N    +L+ 
Sbjct: 59  -----VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 148 NLLLDTMKKTARKSGGEGRIINVSS 172
              L  M          G IIN+SS
Sbjct: 114 KAFLPKMLA-----QKSGNIINMSS 133

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 65.5 bits (159), Expect = 2e-13
 Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 7/119 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSA--KVDAM 87
            G  A+VTGA  GIG E A  L  RG  V++   +     +  E +V  I         +
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDAACV 73

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FATNHLGHF 144
           + ++  +  +     E      +L+I+ +N+G++    +      E    F  N  G F
Sbjct: 74  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQF 132

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 2e-13
 Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 4/153 (2%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           GL A++TG  SG+G  TA  L  +G   V+     + G+   + +      A  D     
Sbjct: 5   GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEK 64

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAG---IMGTPFMLSKDNIELQFATNHLGHFLLT 147
               A          +        I  A     +      + ++ +     N +G F + 
Sbjct: 65  DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 124

Query: 148 NLLLDTMKKTARKSG-GEGRIINVSSEGHRLAY 179
            L+   M +     G   G IIN +S       
Sbjct: 125 RLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 157

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 64.4 bits (156), Expect = 2e-13
 Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 20/153 (13%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           +A+VTG  SG+G   A  L  RG  VV+                       +  +E D++
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------DLIYVEGDVT 48

Query: 93  SLASVRNFASEYNIQHHQLNILINN-----AGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
               VR   +    +     ++          I+G       ++       N LG F + 
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 108

Query: 148 NLLLDTMKK-TARKSGGEGRIINVSSEGHRLAY 179
            L    M++      G  G I+N +S       
Sbjct: 109 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ 141

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 64.8 bits (157), Expect = 3e-13
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 5/118 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA+VTG + GIG      LA  G  V    R+     +  E   ++     V+    
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 62

Query: 90  DLSSLASVRNFASE-YNIQHHQLNILINNAGIMG-TPFM-LSKDNIELQFATNHLGHF 144
           DL S            ++   +LNIL+NNAG++        ++ +  +   TN    +
Sbjct: 63  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 64.4 bits (156), Expect = 3e-13
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 7/118 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G TA++TG+  GIG   A      G  V +   ++ A +     I          A+ L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIAL 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFL 145
           D++  AS+    +E   +   ++IL+NNA +        +++++ +  FA N  G   
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLF 116

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 63.2 bits (153), Expect = 8e-13
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           SG T +VTGA SGIG     + A  G  +V   R+     +    +      A+  A+  
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHF 144
           D+S   +V    +E   +  +L+ + + AG+      + L  +  E     N  G F
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSF 115

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 63.3 bits (153), Expect = 1e-12
 Identities = 46/142 (32%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
            G  A+VTG+TSGIG   A  LA +G  +V+     AA  +     +      KV     
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLT 147
           DLS   +VR        Q  +++IL+NNAGI           +  +   A N    F  T
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122

Query: 148 NLLLDTMKKTARKSGGEGRIIN 169
              L  MKK      G GRIIN
Sbjct: 123 AAALPHMKK-----QGFGRIIN 139

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 62.5 bits (151), Expect = 2e-12
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 2/104 (1%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           +G   +VTGA   IG  TA  LA  G  + +   +  A +  + ++ ++    +  +   
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 61

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIE 133
           D++S  +V            +++ L NNAG  G    +     +
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSD 105

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 61.8 bits (149), Expect = 3e-12
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 10/106 (9%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDA------ 86
            A++TG    IG   A  L  +G  VV+  R     +   + +V E+ +A+  +      
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRH---SEGAAQRLVAELNAARAGSAVLCKG 59

Query: 87  -MELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDN 131
            + L  S L    +          + ++L+NNA       +L  D+
Sbjct: 60  DLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDD 105

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 61.3 bits (147), Expect = 4e-12
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 7/135 (5%)

Query: 33  TAIVTGATSGIGTETARVL---ALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           + ++TG   G+G    + L        H+    R+    K++++ + K   +  +  ++L
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDL 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLL 146
                        E   +   LN+L NNAGI         +    +     TN +   +L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 147 TNLLLDTMKKTARKS 161
               L  +KK A+ +
Sbjct: 123 AKACLPLLKKAAKAN 137

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 61.0 bits (147), Expect = 5e-12
 Identities = 19/154 (12%), Positives = 45/154 (29%), Gaps = 18/154 (11%)

Query: 27  IDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
           +D SG  A+V G T+   +G   A  L   G  V +  +      + ++       +   
Sbjct: 4   VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLF 63

Query: 85  DAMELDLSSLASVRNFASEYNIQHHQLNILINNA------GIMGTPFMLSKDNIELQFAT 138
            A          +    +        L+ L++         + G      + +  L    
Sbjct: 64  RADVTQ---DEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 139 NHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS 172
           +      +       +++        G I+ ++ 
Sbjct: 121 SAYSLVAVARRAEPLLREG-------GGIVTLTY 147

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.8 bits (144), Expect = 1e-11
 Identities = 11/122 (9%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
               +V G    +G+   +    R   V     D+   ++   +++ ++  +  +  +  
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVA--SIDVVENEEASASVIVKMTDSFTEQADQV 59

Query: 91  LSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFML---SKDNIELQFATNHLGHFLLT 147
            + +  +        +   +++ ++  AG              N +L +  +     + +
Sbjct: 60  TAEVGKL--------LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 111

Query: 148 NL 149
           +L
Sbjct: 112 HL 113

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 58.0 bits (139), Expect = 6e-11
 Identities = 21/152 (13%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 30  SGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAM 87
           SG   +VTG  S   I    A+ +   G  +    ++      V+E             +
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVL 60

Query: 88  ELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLT 147
           + D++  AS+    +E      + +  +++ G      +       +      + H + +
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 148 NLLLDTMKKTARKSGGEGRIINVSSEGHRLAY 179
              +   K           ++ +S  G   A 
Sbjct: 121 YSFVAMAKACRSMLNPGSALLTLSYLGAERAI 152

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 55.8 bits (134), Expect = 3e-10
 Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 19/117 (16%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
                +V  A+ GIG   A VL+  G  V +  R+    K      V             
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 50

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNA--GIMGTPFMLSKDNIELQFATNHLGHF 144
                  +R        +  +++IL+ NA     G    L+ ++ +    +  L   
Sbjct: 51  -----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMI 102

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 53.8 bits (128), Expect = 2e-09
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 20/89 (22%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS 93
            +++G  +GIG  T +VL   G  +V                      A+V A   DLS+
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIR----------------DAEVIA---DLST 44

Query: 94  LASVRNFASEYNIQHHQ-LNILINNAGIM 121
               +   ++   +  + ++ L+  AG+ 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLG 73

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 53.1 bits (126), Expect = 4e-09
 Identities = 19/141 (13%), Positives = 36/141 (25%), Gaps = 24/141 (17%)

Query: 34  AIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPS----------- 81
           A+VTGA   +G   A  L   G  V +   R  A    +  T+    P+           
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 82  -----AKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMG-------TPFMLSK 129
                         ++         +       + ++L+NNA                  
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124

Query: 130 DNIELQFATNHLGHFLLTNLL 150
              + +           +N +
Sbjct: 125 CVGDREAMETATADLFGSNAI 145

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 52.6 bits (125), Expect = 4e-09
 Identities = 20/151 (13%), Positives = 38/151 (25%), Gaps = 14/151 (9%)

Query: 30  SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL 89
           S    IV G    +G+         G  V+    D++A       I+ +      +  + 
Sbjct: 1   SSGKVIVYGGKGALGSAILEFFKKNGYTVL--NIDLSANDQADSNILVDGNKNWTEQEQS 58

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
            L   AS         +Q  Q++ +   AG        SKD ++          +     
Sbjct: 59  ILEQTASS--------LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 110

Query: 150 LLDTMKKTARKSGGEGRIINVSSEGHRLAYH 180
                            +    +        
Sbjct: 111 AKLATTHLKPGG----LLQLTGAAAAMGPTP 137

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 19/138 (13%), Positives = 45/138 (32%), Gaps = 8/138 (5%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++TG    IG+   R +       V+ +  +    +  E++     S + +    D+   
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDS 62

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 154
           A +         + +Q + +++ A         S         TN +G + L  +     
Sbjct: 63  AEITRI-----FEQYQPDAVMHLAAESHVD--RSITGPAAFIETNIVGTYALLEVARKYW 115

Query: 155 KKTARKSGGEGRIINVSS 172
                      R  ++S+
Sbjct: 116 SALGEDKKNNFRFHHIST 133

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 47.3 bits (111), Expect = 3e-07
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETI 75
          T +VTG T G+G + AR LA RG  H+++  R         E +
Sbjct: 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELV 54

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.8 bits (107), Expect = 7e-07
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
           A++ G    +G   A  LA  G  +V+G R     +       +    A +
Sbjct: 3  VALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI 53

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 45.5 bits (106), Expect = 1e-06
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 27 IDGSGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKV 84
          ID  G  A + G    +G G   A+ LA  G  +++G    A           +   ++V
Sbjct: 4  IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63

Query: 85 DA 86
            
Sbjct: 64 LP 65

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 44.9 bits (105), Expect = 1e-06
 Identities = 23/147 (15%), Positives = 44/147 (29%), Gaps = 16/147 (10%)

Query: 26  GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVD 85
           G    G  A+V   T  +G  +A +LA  G  VV+  R +   +   +++ K        
Sbjct: 18  GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA 77

Query: 86  AMELDLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFL 145
           A   D +S A                + +     I     +L +   + + +   +  + 
Sbjct: 78  AETADDASRAEA----------VKGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYN 125

Query: 146 LTNLLLDTMKKTARKSGGEGRIINVSS 172
               L         K    G+      
Sbjct: 126 AQPPLGIGGIDATDK----GKEYGGKR 148

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 44.7 bits (104), Expect = 2e-06
 Identities = 7/46 (15%), Positives = 16/46 (34%), Gaps = 2/46 (4%)

Query: 30 SGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKE 73
           G   ++ G  +   I    A+    +G  +     + +  K V+ 
Sbjct: 4  KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP 49

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 44.2 bits (103), Expect = 4e-06
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 12/126 (9%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           +VTG +  IG+ T   L   G H V+ + ++   K     +++ +       +E D+ + 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTM 154
           A +     ++ I     + +I+ AG+       S       +  N  G    T  L+  M
Sbjct: 63  ALMTEILHDHAI-----DTVIHFAGLKAVG--ESVQKPLEYYDNNVNG----TLRLISAM 111

Query: 155 KKTARK 160
           +    K
Sbjct: 112 RAANVK 117

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 43.2 bits (100), Expect = 9e-06
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 5/53 (9%)

Query: 30 SGLTAIVTGA--TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP 80
           G   +V+G    S I    ARV   +G  +V+   D      + + I   +P
Sbjct: 5  DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRLP 54

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 42.5 bits (98), Expect = 1e-05
 Identities = 13/80 (16%), Positives = 25/80 (31%)

Query: 31  GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELD 90
           G   +VTGA   + +     L   G  V    R  +   ++++    + P     A+  D
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

Query: 91  LSSLASVRNFASEYNIQHHQ 110
           +    +            H 
Sbjct: 71  MLKQGAYDEVIKGAAGVAHI 90

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 42.1 bits (97), Expect = 2e-05
 Identities = 11/91 (12%), Positives = 25/91 (27%)

Query: 36  VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA 95
           + G T  IG          G    +  R        K  ++          +E  L    
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 67

Query: 96  SVRNFASEYNIQHHQLNILINNAGIMGTPFM 126
            + +   + ++    L   + +  I+    +
Sbjct: 68  RLVDALKQVDVVISALAGGVLSHHILEQLKL 98

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (94), Expect = 6e-05
 Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 8/157 (5%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
             +VTG    IG+ T   L   G   V    +++         ++ +    +   E+DL 
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCV-VADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
               +     EY I         + AG+               +  N LG  +L  L+  
Sbjct: 62  DRKGLEKVFKEYKIDSVI-----HFAGLKAVGESTQIPLR--YYHNNILGTVVLLELMQQ 114

Query: 153 TMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN 189
                   S       + +   + +   E       N
Sbjct: 115 YNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTN 151

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 16/143 (11%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMEL--- 89
            A++TG T   G+  A  L  +G  V    R  ++    +   + + P        L   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 90  DLSSLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNL 149
           DLS  +++     E           +++         +S ++ E     + +G    T  
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVA-------VSFESPEYTADVDAMG----TLR 111

Query: 150 LLDTMKKTARKSGGEGRIINVSS 172
           LL+ ++    +     R    S+
Sbjct: 112 LLEAIRFLGLEKK--TRFYQAST 132

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 5/69 (7%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           T  V GAT   G    RV A  G HV   V  +           +      V   +  L 
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIAEELQAIPNVTLFQGPLL 59

Query: 93  SLASVRNFA 101
           +   + +  
Sbjct: 60  NNVPLMDTL 68

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.7 bits (88), Expect = 3e-04
 Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 2/87 (2%)

Query: 34  AIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL 91
             + G     G G   A+ L+ R V ++ G+        +K     +  +  +   +  +
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 92  SSLASVRNFASEYNIQHHQLNILINNA 118
           + L  +   AS             N  
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKR 91

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.8 bits (86), Expect = 6e-04
 Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD-VKETIVKEIPSAKVDAM 87
          GS    ++ GAT  IG   A+     G    + VR+  A  +  K  +++   ++  + +
Sbjct: 1  GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 60

Query: 88 ELDL 91
             +
Sbjct: 61 HGSI 64

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 17/140 (12%)

Query: 33  TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS 92
           +A+VTG T   G   A++L  +G  V   V   ++    +  + +      +   + D++
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMA 59

Query: 93  SLASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLD 152
              SV+    +   Q        +  G      + +          + LG   L      
Sbjct: 60  DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTT-------GVVDGLGVTHLLE---- 108

Query: 153 TMKKTARKSGGEGRIINVSS 172
                 R+   E R    S+
Sbjct: 109 ----AIRQFSPETRFYQAST 124

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (79), Expect = 0.003
 Identities = 10/30 (33%), Positives = 12/30 (40%)

Query: 35 IVTGATSGIGTETARVLALRGVHVVMGVRD 64
           + GAT   G  T       G  V + VRD
Sbjct: 7  AIFGATGQTGLTTLAQAVQAGYEVTVLVRD 36

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 35.3 bits (79), Expect = 0.004
 Identities = 11/92 (11%), Positives = 24/92 (26%), Gaps = 6/92 (6%)

Query: 35  IVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSL 94
           ++ G    IG      L     + V G+   +          + +       +E D+S  
Sbjct: 4   LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS------RFLNHPHFHFVEGDISIH 57

Query: 95  ASVRNFASEYNIQHHQLNILINNAGIMGTPFM 126
           +    +  +       L  +         P  
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLR 89

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	216
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.98
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.98
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.98
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.97
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.97
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.97
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.96
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.95
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.95
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.94
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.94
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.93
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.92
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.92
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.92
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.91
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.9
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.84
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.79
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.79
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.76
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.74
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.72
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.72
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.71
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.71
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.71
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.7
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.67
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.63
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.62
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.61
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.61
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.6
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.59
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.52
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.47
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.45
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.35
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.29
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.21
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.13
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.04
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.01
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.94
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.4
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.25
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.23
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.1
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.09
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.05
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.03
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.02
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.99
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.9
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.83
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.81
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.81
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.75
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.74
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.67
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.62
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.61
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.56
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.53
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.52
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.5
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.5
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.48
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.45
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.42
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.42
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.41
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.34
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.34
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.32
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.32
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.29
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.28
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.27
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.23
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.23
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.22
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.22
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.19
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.19
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.18
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.12
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.12
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.07
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.06
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.01
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.01
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.0
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.95
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.95
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.94
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.92
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.88
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.86
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.84
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.76
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.75
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.72
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.72
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.71
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.69
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.65
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.62
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.58
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.52
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.42
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.3
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.29
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.28
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.23
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.21
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.21
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.21
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.19
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.16
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.14
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.08
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.89
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.88
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.83
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.79
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.7
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.64
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.63
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.54
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.52
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.51
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.44
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.44
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.41
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.35
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.31
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.3
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.29
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.29
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.28
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.27
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	95.25
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.23
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.08
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.04
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.02
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.01
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.97
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.97
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.87
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.83
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.77
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.77
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.72
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.65
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.53
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.53
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.51
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.5
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.44
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.33
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.31
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.31
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.31
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.22
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.18
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.12
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.09
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.05
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.99
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.94
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.8
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.78
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.78
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	93.68
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.62
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.54
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.43
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.41
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.36
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.24
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.18
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.06
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.0
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	92.88
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	92.79
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.66
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.62
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.57
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.54
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.4
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	92.3
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.28
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.28
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.19
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.12
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.01
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.96
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.93
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	91.55
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	90.99
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.87
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.87
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.86
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.58
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.08
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.07
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.93
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	89.69
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	89.68
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.65
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	89.41
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.36
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	89.3
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	89.26
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.19
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.18
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.14
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.53
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	88.36
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.35
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	87.88
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.87
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	87.82
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	87.72
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.58
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.36
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.29
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.0
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	86.92
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	86.61
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	86.58
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	86.23
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	85.78
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	85.77
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	85.63
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	85.62
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	85.58
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	85.54
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	85.37
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.99
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	84.97
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	84.96
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	84.82
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	84.58
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	84.43
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	84.32
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.91
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	83.87
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	83.44
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.31
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	83.13
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	82.94
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	82.64
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	82.56
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	82.43
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.35
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.07
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	81.93
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	81.92
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.92
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	81.46
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.35
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	81.29
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	81.24
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	81.21
d2h00a1	250	Methyltransferase 10 domain containing protein MET	81.18
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.12
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	81.11
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	81.09
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	81.01
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	80.84
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.82
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	80.81
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	80.74
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	80.54

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.1e-38  Score=254.35  Aligned_cols=171  Identities=21%  Similarity=0.247  Sum_probs=158.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++....++.++..+++|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999988877788999999999999999999999999


Q ss_pred             cCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +|+||+||||||+..   +..+.+.++|+++|++|+.++++++|+++|+|+++     ++|+||++||.++..+.|+.. 
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~~~~~~~-  154 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIRGIGNQS-  154 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSBCSSBH-
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-----cCCCCcccccHhhccCCCCch-
Confidence            999999999999753   45678999999999999999999999999999987     789999999999998866655 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               .|+.||+++.+|++.++...
T Consensus       155 ---------~Y~asKaal~~lt~~lA~el  174 (258)
T d1iy8a_         155 ---------GYAAAKHGVVGLTRNSAVEY  174 (258)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHh
Confidence                     89999999999999997643

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=8.7e-38  Score=249.82  Aligned_cols=171  Identities=26%  Similarity=0.249  Sum_probs=157.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|++|||||++|||+++|+.|+++|++|++++|+.++++++.+++...  +.++..+++|++|+++++++++++.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46689999999999999999999999999999999999999999999998765  5678999999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +++|++|+||||||..  .+..+.+.++|++++++|+.++++++|+++|.|+++     ++|+||++||.++..+.++..
T Consensus        83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~IVnisS~~~~~~~~~~~  157 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLTGNVGQA  157 (251)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTTCH
T ss_pred             HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-----CCeEEEEECCHHhcCCCCCCH
Confidence            9999999999999986  456688999999999999999999999999999987     689999999999998866654


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                                .|+.||+++.+|++.++...
T Consensus       158 ----------~Y~asKaal~~ltr~lA~el  177 (251)
T d2c07a1         158 ----------NYSSSKAGVIGFTKSLAKEL  177 (251)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHh
Confidence                      89999999999999998654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-37  Score=248.90  Aligned_cols=171  Identities=27%  Similarity=0.328  Sum_probs=157.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+.++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999999999876  5678899999999999999999999


Q ss_pred             hhcCCccEEEECCccCC-CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          106 IQHHQLNILINNAGIMG-TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +++|++|+||||||+.. ...+.+.++|++++++|+.++++++|.++|+|.++     ++|+||++||.++..+.++.. 
T Consensus        84 ~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~Ii~isS~~~~~~~~~~~-  157 (255)
T d1fmca_          84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAENKNINMT-  157 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCTTCH-
T ss_pred             HHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-----cccccccccccchhccccccc-
Confidence            99999999999999874 24478999999999999999999999999999997     788999999999998866654 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               .|+.||+++.+|++.++...
T Consensus       158 ---------~Y~asKaal~~lt~~lA~el  177 (255)
T d1fmca_         158 ---------SYASSKAAASHLVRNMAFDL  177 (255)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------cchhHHHHHHHHHHHHHHHh
Confidence                     89999999999999998653

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-37  Score=247.73  Aligned_cols=171  Identities=20%  Similarity=0.262  Sum_probs=154.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.+ +.++.++++|++|+++++++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999988887776 56788999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccCCc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~  183 (216)
                      ++|+||+||||||+.  .+..+.+.++|++.+++|+.++++++|.++|+|+++     +.|+||+++|..+.. +.++..
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~i~S~~~~~~~~~~~~  154 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----DNPSIINIGSLTVEEVTMPNIS  154 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SSCEEEEECCGGGTCCCSSSCH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----ccccccccccchhccccCcccc
Confidence            999999999999986  466788999999999999999999999999999986     689999999976644 444433


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                                .|+.||+++.+|++.++...
T Consensus       155 ----------~Y~asKaal~~lt~~lA~e~  174 (251)
T d1vl8a_         155 ----------AYAASKGGVASLTKALAKEW  174 (251)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------chHHHHHhHHHHHHHHHHHh
Confidence                      89999999999999997653

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-37  Score=248.01  Aligned_cols=166  Identities=23%  Similarity=0.312  Sum_probs=151.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||+++||||++|||+++|+.|+++|++|++++|++++++++.+++     +.+...+++|++|+++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            578999999999999999999999999999999999988888877766     345788999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|++|+||||||..  .+..+.+.++|++.+++|+.+++.++|.++|+|+++     ++|+||++||.++..+.++..  
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~II~isS~~~~~~~~~~~--  148 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-----RHGRIITIGSVVGTMGNGGQA--  148 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCTTCH--
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-----CCCEeeeecchhhcCCCCCCH--
Confidence            99999999999986  456688999999999999999999999999999987     689999999999998866654  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              .|+.||+++.+|++.++...
T Consensus       149 --------~Y~asKaal~~lt~~lA~el  168 (243)
T d1q7ba_         149 --------NYAAAKAGLIGFSKSLAREV  168 (243)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHHHh
Confidence                    89999999999999987643

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2e-37  Score=248.91  Aligned_cols=170  Identities=28%  Similarity=0.271  Sum_probs=154.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+. +.++++.+++...+ +.++.++++|++|+++++++++++.+
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999985 55677777776665 56899999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .+|+||+||||||+.  .+..+.+.++|+++|++|+.+++.++|.++|+|+++     +.|+||++||.++..+.|+.. 
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~~~~~~~-  153 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLVASANKS-  153 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTTCH-
T ss_pred             HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-----CCceEeecccccceeccCCcc-
Confidence            999999999999986  456688999999999999999999999999999987     689999999999999876654 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               .|+.||+++.+|++.++...
T Consensus       154 ---------~Y~asKaal~~lt~~lA~el  173 (260)
T d1x1ta1         154 ---------AYVAAKHGVVGFTKVTALET  173 (260)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhhhhhhhHHHhHHHHHHHh
Confidence                     89999999999999998654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=246.80  Aligned_cols=168  Identities=25%  Similarity=0.282  Sum_probs=155.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++.||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++..+.||++|+++++++++++.++
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999999999999998765  678999999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|++|++|||||..  .+..+.+.++|++++++|+.+++.+++.++|.|.++     ++|+||++||.++..|.|++.  
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~G~Iv~isS~~~~~~~~~~~--  154 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----NHGHIVTVASAAGHVSVPFLL--  154 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCC-CCCHHHHH--
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-----CCceEEEeecchhcCCCCCcH--
Confidence            99999999999986  355677889999999999999999999999999987     689999999999999877765  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              .|++||+++.+|++.++..
T Consensus       155 --------~Y~asKaal~~~~~~La~E  173 (244)
T d1yb1a_         155 --------AYCSSKFAAVGFHKTLTDE  173 (244)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHHH
Confidence                    8999999999999999753

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.3e-37  Score=248.53  Aligned_cols=170  Identities=19%  Similarity=0.187  Sum_probs=156.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.++..++||++|+++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999988765  567899999999999999999999999


Q ss_pred             cCCccEEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          108 HHQLNILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       108 ~~~id~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      +|++|+||||||+.   .+..+.+.++|++++++|+.++++++|+++|.|.++     ++|+||++||.++..+.|+.. 
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-----~~G~II~isS~~~~~~~~~~~-  153 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVKGPPNMA-  153 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHSCCTTBH-
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-----cCCCCCeeechhhccCCcchH-
Confidence            99999999999975   356688999999999999999999999999999987     789999999999998866654 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                               .|+.||+++.+|++.++....
T Consensus       154 ---------~Y~asKaal~~ltk~lA~el~  174 (260)
T d1zema1         154 ---------AYGTSKGAIIALTETAALDLA  174 (260)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHhh
Confidence                     899999999999999986543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=6.3e-37  Score=245.87  Aligned_cols=170  Identities=26%  Similarity=0.272  Sum_probs=156.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.+..++++|++|+++++++++++.+
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998776  67888999999999999999999999


Q ss_pred             hcC-CccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHH-QLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~-~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +++ ++|+||||||+.  .+..+.+.++|++++++|+.++++++|.++|+|.++     ++|+||++||..+..+.|+..
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~~~~~~~  156 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----ERGNVVFISSVSGALAVPYEA  156 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----SSEEEEEECCGGGTSCCTTCH
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-----ccccccccccccccccccccc
Confidence            887 799999999986  456688999999999999999999999999999987     789999999999988766654


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                                .|+.||+++.+|++.++...
T Consensus       157 ----------~Y~asKaal~~lt~~lA~el  176 (259)
T d2ae2a_         157 ----------VYGATKGAMDQLTRCLAFEW  176 (259)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHT
T ss_pred             ----------chHHHHHHHHHHHHHHHHHh
Confidence                      89999999999999998654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.9e-37  Score=244.84  Aligned_cols=167  Identities=23%  Similarity=0.278  Sum_probs=152.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++     +.+..++++|++|+++++++++++.+
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999988877776665     34678899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++|++|+||||||+.  .+..+.+.++|+++|++|+.++++++|.++|.|.++     +.|+||++||..+..+.++.. 
T Consensus        77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~~~~~~~-  150 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLAGTVACH-  150 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTTBH-
T ss_pred             HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-----CcceEEecccccccccccccc-
Confidence            999999999999986  467789999999999999999999999999999987     689999999999998866654 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               .|+.||+++++|++.++...
T Consensus       151 ---------~Y~asKaal~~ltk~lA~el  170 (244)
T d1nffa_         151 ---------GYTATKFAVRGLTKSTALEL  170 (244)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------chhhHHHHHHHHHHHHHHHh
Confidence                     89999999999999998653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=8.2e-37  Score=243.58  Aligned_cols=167  Identities=24%  Similarity=0.265  Sum_probs=148.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++  ...+.+...  +.++..+++|++|+++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998653  333333333  678899999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|+||+||||||+.  .+..+.+.++|+++|++|+.++++++|+++|+|+++     +.|+||++||.++..+.++..  
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~~~~~~~--  150 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWLKIEAYT--  150 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGSCCSSCH--
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-----CCCCccccccchhcccCcccc--
Confidence            99999999999986  456688999999999999999999999999999987     689999999999998866654  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              .|+.||+++.+|++.++...
T Consensus       151 --------~Y~asKaal~~ltk~lA~el  170 (247)
T d2ew8a1         151 --------HYISTKAANIGFTRALASDL  170 (247)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------cchhhhccHHHHHHHHHHHh
Confidence                    89999999999999998653

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.9e-37  Score=246.99  Aligned_cols=166  Identities=24%  Similarity=0.239  Sum_probs=151.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999988777666554     457889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|++|+||||||+.  .+..+.+.++|++++++|+.++++++|.++|+|+++     ++|+||++||.++..+.++..  
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-----~~G~II~isS~~~~~~~~~~~--  149 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLMGLALTS--  149 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTTCH--
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-----CCCeecccccchhcccccchh--
Confidence            99999999999986  456688999999999999999999999999999987     689999999999998766654  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              .|+.||+++.+|++.++...
T Consensus       150 --------~Y~asKaal~~lt~~lA~e~  169 (254)
T d1hdca_         150 --------SYGASKWGVRGLSKLAAVEL  169 (254)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hHHHHHHHHHHHHHHHHHHh
Confidence                    89999999999999998653

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-36  Score=243.67  Aligned_cols=171  Identities=22%  Similarity=0.199  Sum_probs=146.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.++.++.+|++++++++++++++.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVS   80 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999998776  5679999999999999999999999


Q ss_pred             hhc-CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQH-HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~-~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +++ |++|+||||||+.  .+..+.+.++|++++++|+.++++++|.++|+|+++     +.|+||++||..+..+.++.
T Consensus        81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~~~~~~  155 (259)
T d1xq1a_          81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVVSASVG  155 (259)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC----------C
T ss_pred             HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-----cccccccccccccccccccc
Confidence            998 6899999999986  466789999999999999999999999999999987     68999999999999886655


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .          .|+.||+++.+|++.++...
T Consensus       156 ~----------~Y~asKaal~~lt~~lA~e~  176 (259)
T d1xq1a_         156 S----------IYSATKGALNQLARNLACEW  176 (259)
T ss_dssp             C----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             c----------cccccccchhhhhHHHHHHh
Confidence            4          89999999999999998654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1e-36  Score=244.35  Aligned_cols=166  Identities=26%  Similarity=0.329  Sum_probs=152.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.++.++++|++|+++++++++++.+++|+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999999999999999999999765  567999999999999999999999999999


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHH--HHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDT--MKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      ||+||||||+.  .+..+.+.++|+++|++|+.++++++|+++|+  |.++     +.|+||+++|..+..+.|+..   
T Consensus        80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-----~~g~Ii~i~S~~~~~~~~~~~---  151 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQGVVHAA---  151 (257)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-----TEEEEEEECCGGGTSCCTTCH---
T ss_pred             CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-----CCcccccccccccccccccch---
Confidence            99999999986  45668899999999999999999999999997  4554     578999999999999877665   


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                             .|+.||+++.+|++.++...
T Consensus       152 -------~Y~asKaal~~ltk~lA~el  171 (257)
T d2rhca1         152 -------PYSASKHGVVGFTKALGLEL  171 (257)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHT
T ss_pred             -------hHHHHHHHHHHHHHHHHHHh
Confidence                   89999999999999998654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.1e-36  Score=243.42  Aligned_cols=167  Identities=22%  Similarity=0.219  Sum_probs=151.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++..   +.++.++++|++|+++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            48899999999999999999999999999999999999888888777642   457889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|+||+||||||+.  .+..+.+.++|+++|++|+.++++++|+++|+|+++    +.+|+||++||.++..+.|+..  
T Consensus        80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~----~~gg~Ii~isS~~~~~~~~~~~--  153 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK----GLGASIINMSSIEGFVGDPSLG--  153 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS----SSCEEEEEECCGGGTSCCTTCH--
T ss_pred             hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhc----CCCCceEeeeccceeccCCCch--
Confidence            99999999999986  467789999999999999999999999999999875    1246999999999998766554  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              .|+.||+++.+|++.++.
T Consensus       154 --------~Y~asKaal~~lt~~lA~  171 (251)
T d1zk4a1         154 --------AYNASKGAVRIMSKSAAL  171 (251)
T ss_dssp             --------HHHHHHHHHHHHHHHHHH
T ss_pred             --------hHHHHHHHHhcchHHHHH
Confidence                    899999999999998874

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.4e-36  Score=241.23  Aligned_cols=165  Identities=25%  Similarity=0.340  Sum_probs=152.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCe-------EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVH-------VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~-------Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +++|||||++|||+++|+.|+++|++       |++++|+.++++++.+++...  +.+..++++|++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999997       999999999999999988765  678999999999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+++|++|+||||||+.  .+..+.+.++|+++|++|+.++++++|.++|+|+++     ++|+||++||.++..+.|+.
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~~~~~~  154 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATKAFRHS  154 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTTC
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-----CCCceEEEechhhcCCCCCC
Confidence            99999999999999986  466788999999999999999999999999999987     68999999999999987765


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .          .|++||+++.+|++.++...
T Consensus       155 ~----------~Y~asK~al~~lt~~la~el  175 (240)
T d2bd0a1         155 S----------IYCMSKFGQRGLVETMRLYA  175 (240)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             h----------HHHHHHHHHHHHHHHHHHHh
Confidence            4          89999999999999997643

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.9e-36  Score=243.18  Aligned_cols=172  Identities=23%  Similarity=0.273  Sum_probs=153.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+ .++.+.+++.+.  +.++..+++|++|+++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999864 567777777765  6688999999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +++|+||+||||||+.  .+..+.+.++|++++++|+.++++++|.++|+|.++    +.+++||++||.++..+.|+..
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~----~~g~~Iv~isS~~~~~~~~~~~  156 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN----DIKGTVINMSSVHEKIPWPLFV  156 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----TCCCEEEEECCGGGTSCCTTCH
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccc----cccccccccccchhcccCcccc
Confidence            9999999999999986  456688999999999999999999999999999876    1345699999999998866654


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                                .|+.||+++.+|++.++....
T Consensus       157 ----------~Y~asKaal~~lt~~lA~e~~  177 (261)
T d1geea_         157 ----------HYAASKGGMKLMTETLALEYA  177 (261)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----------ccccCCccchhhHHHHHHHhh
Confidence                      899999999999999986543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.1e-36  Score=242.43  Aligned_cols=167  Identities=22%  Similarity=0.294  Sum_probs=151.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++     +.++..+++|++|+++++++++++.++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            488999999999999999999999999999999999988887777665     567889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|+||+||||||+.  .+..+.+.++|++.+++|+.++++++|+++|.|.++.    .+|+||++||.++..+.++..  
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~----~~g~Iv~isS~~~~~~~~~~~--  150 (256)
T d1k2wa_          77 WGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGG----RGGKIINMASQAGRRGEALVG--  150 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSCCTTCH--
T ss_pred             hCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhc----cCCccccccchhhcccccccc--
Confidence            99999999999986  4666889999999999999999999999999876651    479999999999998876655  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              .|+.||+++.+|++.++...
T Consensus       151 --------~Y~asKaal~~lt~~lA~el  170 (256)
T d1k2wa_         151 --------VYCATKAAVISLTQSAGLNL  170 (256)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------chhhhhhHHHHHHHHHHHHh
Confidence                    89999999999999998654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.3e-36  Score=241.13  Aligned_cols=167  Identities=23%  Similarity=0.245  Sum_probs=152.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .|++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.  +.++..+++|++|+++++++++++.+++|+
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            378999999999999999999999999999999999999999999876  567899999999999999999999999999


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      ||+||||||+.  .+..+.+.++|++++++|+.++++++|+++|+|.++    +.+|+||++||.++..+.|+..     
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~~~~~~~~-----  149 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE----GHGGKIINACSQAGHVGNPELA-----  149 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTSCCTTBH-----
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhh----ccccccccccchhhcccCcccc-----
Confidence            99999999986  456688999999999999999999999999998775    2468899999999998866655     


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhhh
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                           .|+.||+++.+|++.++...
T Consensus       150 -----~Y~asKaal~~ltk~lA~el  169 (255)
T d1gega_         150 -----VYSSSKFAVRGLTQTAARDL  169 (255)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cchhCHHHHHhhHHHHHHHh
Confidence                 89999999999999998653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2e-36  Score=242.08  Aligned_cols=164  Identities=24%  Similarity=0.278  Sum_probs=149.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++     +.+..++++|++|+++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999988887777665     456788999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|++|+||||||+.  .+..+.+.++|++.|++|+.++|+++|.++|+|++      .+|+||++||.++..+.++..  
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~------~~G~Iv~isS~~~~~~~~~~~--  149 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE------TGGSIINMASVSSWLPIEQYA--  149 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT------TCEEEEEECCGGGTSCCTTBH--
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh------cCCceecccchhhhcCccccc--
Confidence            99999999999986  45678899999999999999999999999999976      379999999999998766654  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              .|+.||+++.+|++.++..
T Consensus       150 --------~Y~asKaal~~lt~~lA~e  168 (253)
T d1hxha_         150 --------GYSASKAAVSALTRAAALS  168 (253)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHH
T ss_pred             --------cccchhHHHHHHHHHHHHH
Confidence                    8999999999999988753

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.3e-36  Score=239.47  Aligned_cols=163  Identities=25%  Similarity=0.287  Sum_probs=145.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .++||++|||||++|||+++|+.|+++|++|++++|+++.. +..+++     +  ..++++|++|+++++++++++.+.
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-----~--~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-----G--GAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-----T--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-----C--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999997653 333332     2  356899999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|+||+||||||+.  .+..+.+.++|+++|++|+.++++++|+++|+|+++     ++|+||++||..+..+.++..  
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~Ii~isS~~~~~~~~~~~--  146 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----GGGAIVNVASVQGLFAEQENA--  146 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCGGGTSBCTTBH--
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-----ccccccccccccccccccccc--
Confidence            99999999999986  467789999999999999999999999999999987     689999999999999866654  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              .|+.||+++.+|++.++...
T Consensus       147 --------~Y~asKaal~~ltk~lA~el  166 (248)
T d2d1ya1         147 --------AYNASKGGLVNLTRSLALDL  166 (248)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hhHHHHHHHHHHHHHHHHHh
Confidence                    89999999999999987653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5e-36  Score=238.55  Aligned_cols=166  Identities=22%  Similarity=0.234  Sum_probs=149.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEc-CCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVR-DIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +++|||||++|||+++|++|+++|++|+++++ +.+.++++.+++...  +.++.++++|++|+++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999865 556677788887765  678899999999999999999999999999


Q ss_pred             ccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          111 LNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       111 id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +|+||||||..  .+..+.+.++|++++++|+.++++++|+++|+|+++     ++|+||++||.++..+.++..     
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~IVnisS~~~~~~~~~~~-----  149 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLIGNIGQA-----  149 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTTCH-----
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-----CCcEEEEEcChhhcCCCCCCH-----
Confidence            99999999986  456788999999999999999999999999999987     789999999999998866654     


Q ss_pred             CCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          189 NDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                           .|+.||+++.+|++.++....
T Consensus       150 -----~Y~asKaal~~ltk~lA~el~  170 (244)
T d1edoa_         150 -----NYAAAKAGVIGFSKTAAREGA  170 (244)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHChHHHHHHHh
Confidence                 899999999999999986543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-36  Score=239.29  Aligned_cols=165  Identities=23%  Similarity=0.336  Sum_probs=146.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+++++++..+++      .+..++++|++|+++++++++++.+
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999977766554432      3477899999999999999999999


Q ss_pred             hcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      ++|+||+||||||+..   +..+.+.++|++++++|+.++++++|.++|+|+++      +|+||++||.++..+.++..
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~Ii~isS~~~~~~~~~~~  149 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIGQAQAV  149 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHCCTTCH
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC------CCCCcccccccccccccCcc
Confidence            9999999999999752   34578999999999999999999999999999874      69999999999998866554


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                                .|+.||+++.+|++.++...
T Consensus       150 ----------~Y~asKaal~~lt~~lA~e~  169 (250)
T d1ydea1         150 ----------PYVATKGAVTAMTKALALDE  169 (250)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hhHHHHhhHHHHHHHHHHHh
Confidence                      89999999999999998654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=237.44  Aligned_cols=175  Identities=24%  Similarity=0.228  Sum_probs=156.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      |.+++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++..+.++.++.+++||++++++++++++++.
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            44589999999999999999999999999999999999999999999999988766789999999999999999999999


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +++|+||+||||||..  .+..+.+.++|++.+++|+.+++++++.++|.|.++.   ..+|+||++||.++..+.|.. 
T Consensus        85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~---~~~g~Ii~isS~~~~~~~p~~-  160 (257)
T d1xg5a_          85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN---VDDGHIININSMSGHRVLPLS-  160 (257)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CCSCEEEEECCGGGTSCCSCG-
T ss_pred             HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhc---cCCCceEEEechHhcCCCCCc-
Confidence            9999999999999986  4677899999999999999999999999999998752   146899999999887543221 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             ....|+.+|+++.+|++.++.
T Consensus       161 -------~~~~Y~~sKaal~~ltr~la~  181 (257)
T d1xg5a_         161 -------VTHFYSATKYAVTALTEGLRQ  181 (257)
T ss_dssp             -------GGHHHHHHHHHHHHHHHHHHH
T ss_pred             -------ccHHHHHHHHHHHhCHHHHHH
Confidence                   223799999999999998875

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.6e-36  Score=236.49  Aligned_cols=158  Identities=19%  Similarity=0.229  Sum_probs=138.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..++||++|||||++|||+++|+.|+++|++|++++|+.+..             ..+..+++|++|+++++++++++.+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-------------cCceEEEEecCCHHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999997653             3457899999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++|++|+||||||+.  .+..+.+.++|++++++|+.+++.++|.++|+|.++     +.|+||++||.++..+.++.. 
T Consensus        70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~Iv~isS~~~~~~~~~~~-  143 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----KFGRMIFIGSVSGLWGIGNQA-  143 (237)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCCC-----CCH-
T ss_pred             hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----CCCceEEEcchhhccCCcccH-
Confidence            999999999999986  456788999999999999999999999999999987     688999999999998866654 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|+.||+++.+|++.++..
T Consensus       144 ---------~Y~asKaal~~lt~~lA~e  162 (237)
T d1uzma1         144 ---------NYAASKAGVIGMARSIARE  162 (237)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHHHHHHhh
Confidence                     8999999999999998764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.3e-35  Score=237.32  Aligned_cols=171  Identities=22%  Similarity=0.196  Sum_probs=146.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc-CCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.... +..++.++++|++++++++++++++.
T Consensus         1 ~rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           1 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999988763 23579999999999999999999999


Q ss_pred             hhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc-cccc
Q 027991          106 IQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG-HRLA  178 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~  178 (216)
                      +++|++|+||||||+..      +..+.+.++|++.|++|+.++++++|.++|+|+++      +|+||+++|.. +..+
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~S~~~~~~~  154 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLHA  154 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSSC
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc------cCcceeeeeecccccc
Confidence            99999999999999852      23456889999999999999999999999999885      56777777755 4566


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .|+..          .|+.||+++.+|++.++...
T Consensus       155 ~~~~~----------~Y~asKaal~~lt~~lA~el  179 (264)
T d1spxa_         155 TPDFP----------YYSIAKAAIDQYTRNTAIDL  179 (264)
T ss_dssp             CTTSH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCch----------hhhhhhhhHHHHHHHHHHHh
Confidence            55544          89999999999999998654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.4e-35  Score=232.81  Aligned_cols=163  Identities=21%  Similarity=0.259  Sum_probs=141.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .++||++|||||++|||+++|+.|+++|++|++++|+++++++..+++       +..+++||++|+++++++++++.++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999999999987776665433       3567899999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|++|+||||||+.  .+..+.+.++|++.+++|+.++++++|.++|.|.++     +.+.|+++|| .+..+.++.   
T Consensus        75 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~~~i~~~ss-~~~~~~~~~---  145 (242)
T d1ulsa_          75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----NPGSIVLTAS-RVYLGNLGQ---  145 (242)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CCEEEEEECC-GGGGCCTTC---
T ss_pred             cCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-----ccceeeeecc-ccccCCCCC---
Confidence            99999999999986  456688999999999999999999999999999986     5677777666 455554443   


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                             ..|+.||+++.+|++.++...
T Consensus       146 -------~~Y~asKaal~~ltk~lA~el  166 (242)
T d1ulsa_         146 -------ANYAASMAGVVGLTRTLALEL  166 (242)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cchHHHHHHHHHHHHHHHHHH
Confidence                   389999999999999987643

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.4e-34  Score=231.87  Aligned_cols=171  Identities=22%  Similarity=0.215  Sum_probs=156.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.+|++++++++++++++.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999999999888776  56788999999999999999999999


Q ss_pred             hc-CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          107 QH-HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       107 ~~-~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .+ +.+|+||||||..  .+..+.+.++|.+++++|+.++++++++++|.|.++     ..|+||++||.++..+.++..
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-----~~g~ii~isS~~~~~~~~~~~  154 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFSALPSVS  154 (258)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTSCCTTCH
T ss_pred             HhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-----cccccccccccccccccccch
Confidence            98 5799999999986  456788999999999999999999999999999987     799999999999998866655


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                                .|+.+|+++++|++.++....
T Consensus       155 ----------~Y~~sK~al~~lt~~lA~el~  175 (258)
T d1ae1a_         155 ----------LYSASKGAINQMTKSLACEWA  175 (258)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----------hHHHHHHHHHHHHHHHHHhcC
Confidence                      899999999999999876543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.3e-35  Score=236.91  Aligned_cols=171  Identities=20%  Similarity=0.177  Sum_probs=152.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc-CCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.. +..++.++++|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999987763 235799999999999999999999999


Q ss_pred             hcCCccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          107 QHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      ++|++|++|||||...    +..+.+.++|++.+++|+.+++.++|.++|+|.++     ++|+|+++||.++..+.++.
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~ii~~ss~~~~~~~~~~  155 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-----KGEIVNVSSIVAGPQAHSGY  155 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEECCGGGSSSCCTTS
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-----ccccccchhhhhccccCCCC
Confidence            9999999999999752    22346889999999999999999999999999986     67888888888888776655


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .          .|+.||+++.+|++.++...
T Consensus       156 ~----------~Y~asKaal~~ltk~lA~el  176 (274)
T d1xhla_         156 P----------YYACAKAALDQYTRCTAIDL  176 (274)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             c----------eehhhhhHHHHHHHHHHHHH
Confidence            4          89999999999999987654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5e-35  Score=236.32  Aligned_cols=170  Identities=21%  Similarity=0.189  Sum_probs=148.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc-CCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.. ++.++.+++||++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999887653 245799999999999999999999999


Q ss_pred             hcCCccEEEECCccCCC--C----CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC-Ccccccc
Q 027991          107 QHHQLNILINNAGIMGT--P----FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS-EGHRLAY  179 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~--~----~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS-~~~~~~~  179 (216)
                      ++|++|+||||||...+  .    .+.+.++|++++++|+.+++.++|+++|+|+++      +|++|+++| .++..+.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~Ss~a~~~~~  155 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQAQ  155 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSSCC
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc------CCccccccchhccccCC
Confidence            99999999999998632  2    245777899999999999999999999999985      456666665 5667776


Q ss_pred             cCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          180 HEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      ++..          .|+.||+++.+|++.++...
T Consensus       156 ~~~~----------~Y~asKaal~~ltk~lA~el  179 (272)
T d1xkqa_         156 PDFL----------YYAIAKAALDQYTRSTAIDL  179 (272)
T ss_dssp             CSSH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcc----------hhhhHHHHHHHHHHHHHHHh
Confidence            6554          89999999999999998643

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=6.4e-35  Score=235.20  Aligned_cols=169  Identities=22%  Similarity=0.268  Sum_probs=150.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++..   ..++.+++||++|+++++++++++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999988888888754   245778999999999999999999999


Q ss_pred             cCCccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          108 HHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       108 ~~~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +|++|+||||||+..    +..+.+.++|++++++|+.++++++|.++|+|.++     ++|+||++||..+..+.++. 
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~ii~iss~~~~~~~~~~-  153 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----KKGSIVFTASISSFTAGEGV-  153 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----TCEEEEEECCGGGTCCCTTS-
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-----CCCCcccccccccccccccc-
Confidence            999999999999863    24578999999999999999999999999999987     68999999999888764432 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              ...|+.||+++.+|++.++...
T Consensus       154 --------~~~Y~asKaal~~lt~~lA~el  175 (268)
T d2bgka1         154 --------SHVYTATKHAVLGLTTSLCTEL  175 (268)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------ccccchhHHHHHhCHHHHHHHh
Confidence                    1269999999999999997653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-35  Score=234.90  Aligned_cols=162  Identities=27%  Similarity=0.322  Sum_probs=147.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ..||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++...+++.++.++++|++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            36999999999999999999999999999999999999999999998887777889999999999999999999999999


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      |++|+||||||+.      ..++|++.+++|+.+++.+++.++|+|.++  ..+.+|+||++||.++..|.|+..     
T Consensus        81 G~iDilVnnAg~~------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--~~~~~g~Iv~isS~~~~~~~~~~~-----  147 (254)
T d2gdza1          81 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQ--NGGEGGIIINMSSLAGLMPVAQQP-----  147 (254)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGG--GTCCCEEEEEECCGGGTSCCTTCH-----
T ss_pred             CCcCeeccccccc------ccccchheeeeehhhHHHHHHHHHHHHHHh--hcCCCcEEEeeccHhhccCCCCcc-----
Confidence            9999999999985      345689999999999999999999999876  233468999999999999866655     


Q ss_pred             CCCCccchHHHHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~~~  208 (216)
                           .|+.||+++.+|+++
T Consensus       148 -----~Y~asKaal~~ltrs  162 (254)
T d2gdza1         148 -----VYCASKHGIVGFTRS  162 (254)
T ss_dssp             -----HHHHHHHHHHHHHHH
T ss_pred             -----chHHHHHHHHHHHHH
Confidence                 899999999999986

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=9.3e-35  Score=235.16  Aligned_cols=165  Identities=19%  Similarity=0.212  Sum_probs=145.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++     +.++..+++|++++++++++++++.++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999988777665554     457899999999999999999999999


Q ss_pred             cCCccEEEECCccCCC-------CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          108 HHQLNILINNAGIMGT-------PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~-------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +|++|++|||||+..+       ..+.+.++|+++|++|+.++++++|.++|+|+++      +|+||+++|..+..+.+
T Consensus        77 ~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~g~iI~i~S~~~~~~~~  150 (276)
T d1bdba_          77 FGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS------RGNVIFTISNAGFYPNG  150 (276)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTSTTS
T ss_pred             hCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc------CCCceeeeechhccCCC
Confidence            9999999999998532       2344556799999999999999999999999885      68999999999988766


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      +..          .|+.||+++.+|++.++...
T Consensus       151 ~~~----------~Y~asKaal~~ltr~lA~el  173 (276)
T d1bdba_         151 GGP----------LYTAAKHAIVGLVRELAFEL  173 (276)
T ss_dssp             SCH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCc----------hHHHHHHHHHHHHHHHHHHh
Confidence            554          89999999999999998653

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.1e-34  Score=232.81  Aligned_cols=181  Identities=23%  Similarity=0.225  Sum_probs=154.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.++++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+++ +.++..+++|++|+++++++++++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999999999888887766 567899999999999999999999


Q ss_pred             HhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          105 NIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      .+++|++|+||||||+.  .+..+.+.++|++++++|+.+++.++|.++|+|.++    ..+|+|++++|.....+.+..
T Consensus        82 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~----~~~g~i~~~~s~~~~~~~~~~  157 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK----QQKGSIVVTSSMSSQIINQSS  157 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCEEE
T ss_pred             HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc----ccceEEEEeeccccccccccc
Confidence            99999999999999986  456688999999999999999999999999998654    257788888887665543221


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .   ........|+.||+++.+|++.++...
T Consensus       158 ~---~~~~~~~~Y~asKaal~~lt~~lA~el  185 (260)
T d1h5qa_         158 L---NGSLTQVFYNSSKAACSNLVKGLAAEW  185 (260)
T ss_dssp             T---TEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c---ccCccccchhhhhhhHHHHHHHHHHHh
Confidence            1   112234589999999999999997643

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-34  Score=234.13  Aligned_cols=171  Identities=21%  Similarity=0.254  Sum_probs=152.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC---CCeEEEEEccCCCHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      ..++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++....+   +.++..+++|++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            569999999999999999999999999999999999999999999999987653   45799999999999999999999


Q ss_pred             HHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC
Q 027991          104 YNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE  181 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (216)
                      +.+.+|++|+||||||..  .+..+.+.++|++++++|+.++++++|+++|.|.++     ++|+||++||. +..+.|+
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~Ii~~ss~-~~~~~~~  161 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVP-TKAGFPL  161 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCC-CTTCCTT
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-----ccccccccccc-ccccccc
Confidence            999999999999999985  466788999999999999999999999999999987     67889988653 3344343


Q ss_pred             CccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          182 GIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       182 ~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .          ..|+.||+++.+|++.++...
T Consensus       162 ~----------~~Y~asKaal~~ltk~lA~el  183 (297)
T d1yxma1         162 A----------VHSGAARAGVYNLTKSLALEW  183 (297)
T ss_dssp             C----------HHHHHHHHHHHHHHHHHHHHT
T ss_pred             c----------ccchhHHHHHHHHHHHHHHHh
Confidence            3          489999999999999998654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=3.9e-34  Score=228.84  Aligned_cols=167  Identities=25%  Similarity=0.285  Sum_probs=147.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC-CHHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYN  105 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~  105 (216)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++.+. .+++....++.++.++.+|++ +.++++++++++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998877544 455666666789999999998 6678999999999


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +++|+||+||||||..      ++++|++++++|+.+++++++.++|.|.++  +.+..|+||++||.++..+.++..  
T Consensus        80 ~~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~--~~~~~g~Ii~isS~~~~~~~~~~~--  149 (254)
T d1sbya1          80 DQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKR--KGGPGGIIANICSVTGFNAIHQVP--  149 (254)
T ss_dssp             HHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGG--GTCCCEEEEEECCGGGTSCCTTSH--
T ss_pred             HHcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhc--ccCCCceEEEEechhhccCCCCCH--
Confidence            9999999999999963      567899999999999999999999999875  233579999999999998866655  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                              .|++||+++.+|++.++..
T Consensus       150 --------~Y~asKaal~~~t~~la~e  168 (254)
T d1sbya1         150 --------VYSASKAAVVSFTNSLAKL  168 (254)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHhh
Confidence                    8999999999999999865

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-34  Score=231.32  Aligned_cols=172  Identities=23%  Similarity=0.217  Sum_probs=153.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH---cCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLAL---RGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      .|+||+++||||++|||+++|++|++   +|++|++++|+.++++++.+++..+.++.++..++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            47899999999999999999999986   799999999999999999999999888889999999999999999999988


Q ss_pred             Hh----hcCCccEEEECCccCC-----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991          105 NI----QHHQLNILINNAGIMG-----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus       105 ~~----~~~~id~li~~Ag~~~-----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      .+    .++.+|++|||||..+     +..+.+.++|+++|++|+.+++.++|.++|+|+++   ++..|+||++||.++
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~---~~~~g~Iv~isS~~~  159 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDS---PGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCC---TTCEEEEEEECCGGG
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhc---CCCcccccccccccc
Confidence            76    3468999999999753     24577899999999999999999999999999875   113589999999999


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+.+++.          .|+.||+++.+|++.++..
T Consensus       160 ~~~~~~~~----------~Y~asKaal~~lt~~la~e  186 (259)
T d1oaaa_         160 LQPYKGWG----------LYCAGKAARDMLYQVLAAE  186 (259)
T ss_dssp             TSCCTTCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCccch----------HHHHHHHHHHHHHHHHHhC
Confidence            99877654          8999999999999998753

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-34  Score=236.18  Aligned_cols=167  Identities=25%  Similarity=0.281  Sum_probs=146.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC---------cchHHHHHHHHhhcCCCeEEEEEccCCCHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI---------AAGKDVKETIVKEIPSAKVDAMELDLSSLASV   97 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   97 (216)
                      ++++||++|||||++|||+++|+.|+++|++|++++++.         +.+++..+++...     .....+|++|.+++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~   77 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVEAG   77 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGGGH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHHHH
Confidence            468999999999999999999999999999999997754         3344555555433     34567899999999


Q ss_pred             HHHHHHHHhhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcc
Q 027991           98 RNFASEYNIQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGH  175 (216)
Q Consensus        98 ~~~~~~~~~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  175 (216)
                      +++++++.+.+|+||+||||||+.  .++.+.+.++|++++++|+.++++++|.++|+|+++     +.|+||++||..+
T Consensus        78 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IV~isS~~~  152 (302)
T d1gz6a_          78 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASASG  152 (302)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-----CCcEEEEeCChhh
Confidence            999999999999999999999987  456789999999999999999999999999999987     6899999999999


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      ..+.++..          .|++||+++.+|++.++...
T Consensus       153 ~~~~~~~~----------~Y~asKaal~~lt~~la~E~  180 (302)
T d1gz6a_         153 IYGNFGQA----------NYSAAKLGLLGLANTLVIEG  180 (302)
T ss_dssp             HHCCTTCH----------HHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCcH----------HHHHHHHHHHHHHHHHHHHH
Confidence            98866654          89999999999999998653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-35  Score=235.45  Aligned_cols=172  Identities=26%  Similarity=0.266  Sum_probs=150.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+++|||||++|||+++|++|+++ |++|++++|+.++++++.++++.+  +.++.+++||++|.++++++++++.+++|
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            357799999999999999999987 899999999999999999999887  56688999999999999999999999999


Q ss_pred             CccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCC
Q 027991          110 QLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDK  187 (216)
Q Consensus       110 ~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  187 (216)
                      +||+||||||+..  +..+.+.++|+..|++|+++++.++|.++|+|++       .|+||++||..+..+.+...+|.+
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~g~ivnisS~~~~~~~~~~~~y~~  153 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQ  153 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHH
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCcccccccceeccccccchhhh
Confidence            9999999999863  4456678899999999999999999999999964       589999999999887776665532


Q ss_pred             -------------------------------CCCCCccchHHHHHHHHHHHHHHh
Q 027991          188 -------------------------------INDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       188 -------------------------------~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                                                     ...+...|+.||+++.+|++.++.
T Consensus       154 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~  208 (275)
T d1wmaa1         154 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHAR  208 (275)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHH
Confidence                                           222345799999999999988764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-34  Score=225.59  Aligned_cols=164  Identities=21%  Similarity=0.258  Sum_probs=141.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .+.++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++      ..+..+++|++|++++++++    
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~----   71 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERAL----   71 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----
Confidence            45689999999999999999999999999999999999987766655443      24678899999999987766    


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +++|++|+||||||..  .+..+.+.++|++.+++|+.+++.++|.++|.|.++    ..+|+||++||.++..+.|+..
T Consensus        72 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~Ii~isS~~~~~~~~~~~  147 (244)
T d1pr9a_          72 GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR----GVPGAIVNVSSQCSQRAVTNHS  147 (244)
T ss_dssp             TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCTTBH
T ss_pred             HHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh----CCcceEeecccccccccccchh
Confidence            4578999999999986  456688999999999999999999999999976543    1579999999999988766655


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                                .|+.||+++.+|++.++...
T Consensus       148 ----------~Y~asKaal~~lt~~lA~el  167 (244)
T d1pr9a_         148 ----------VYCSTKGALDMLTKVMALEL  167 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hhhhhHHHHHHHHHHHHHHh
Confidence                      89999999999999998654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-33  Score=224.53  Aligned_cols=163  Identities=23%  Similarity=0.339  Sum_probs=140.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..++    .  ..+..+++|++|++++++++    +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~----~--~~~~~~~~Dv~~~~~v~~~~----~   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----C--PGIEPVCVDLGDWDATEKAL----G   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----S--TTCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----c--CCCeEEEEeCCCHHHHHHHH----H
Confidence            358999999999999999999999999999999999998776655443    3  24678899999999887665    4


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      ++|++|+||||||+.  .+..+.+.++|++.+++|+.+++.++|.++|.|.++    +.+|+||+++|..+..+.|+.. 
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~~~~-  145 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR----GVPGSIVNVSSMVAHVTFPNLI-  145 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCTTBH-
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh----cccCcccccchhhccccCCccc-
Confidence            679999999999986  456788999999999999999999999999987654    1578999999999888766654 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               .|+.||+++.+|++.++...
T Consensus       146 ---------~Y~asKaal~~lt~~lA~e~  165 (242)
T d1cyda_         146 ---------TYSSTKGAMTMLTKAMAMEL  165 (242)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------cccchHHHHHHHHHHHHHHh
Confidence                     89999999999999998654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-33  Score=224.07  Aligned_cols=166  Identities=25%  Similarity=0.248  Sum_probs=153.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.... +.....+.+|+++.+.+..+++++.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999988877665 6688999999999999999999999999


Q ss_pred             CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +.+|++|||||..  .+..+.+.++|++++++|+.+++.+++.++|+|+++      +|+||++||.++..+.|+..   
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~------~G~ii~isS~~~~~~~p~~~---  161 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVAYPMVA---  161 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSCCTTCH---
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc------CCcceEeccchhcCCCCCch---
Confidence            9999999999986  355678999999999999999999999999999864      79999999999999877655   


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                             .|++||+++.+|++.++.
T Consensus       162 -------~Y~asKaal~~~~~~La~  179 (269)
T d1xu9a_         162 -------AYSASKFALDGFFSSIRK  179 (269)
T ss_dssp             -------HHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHH
Confidence                   999999999999999975

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.2e-33  Score=221.01  Aligned_cols=169  Identities=12%  Similarity=0.108  Sum_probs=146.1

Q ss_pred             CCCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      +..+++||++|||||+|  |||+++|++|+++|++|++++|+++..+. .+++...  ..+...+++|++|+++++++++
T Consensus         2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   78 (256)
T d1ulua_           2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEA--LGGALLFRADVTQDEELDALFA   78 (256)
T ss_dssp             EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHH--TTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhc--cCcccccccccCCHHHHHHHHH
Confidence            45679999999999987  99999999999999999999998654443 4444444  3456789999999999999999


Q ss_pred             HHHhhcCCccEEEECCccCC------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccc
Q 027991          103 EYNIQHHQLNILINNAGIMG------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  176 (216)
                      ++.+++|++|+||||||...      +..+.+.++|+..+++|+.+++.++|.++|+|++       +|+||++||..+.
T Consensus        79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~Iv~isS~~~~  151 (256)
T d1ulua_          79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASE  151 (256)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGT
T ss_pred             HHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-------CCEEEEEeehHhc
Confidence            99999999999999999752      3457789999999999999999999999999874       6899999999998


Q ss_pred             ccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          177 LAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .+.|+..          .|+.||+++.+|++.++...
T Consensus       152 ~~~~~~~----------~Y~asKaal~~ltr~lA~el  178 (256)
T d1ulua_         152 KVVPKYN----------VMAIAKAALEASVRYLAYEL  178 (256)
T ss_dssp             SBCTTCH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCch----------HHHHHHHHHHHHHHHHHHHh
Confidence            8866654          89999999999999988653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=5.3e-33  Score=222.00  Aligned_cols=158  Identities=18%  Similarity=0.111  Sum_probs=139.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||++|||+++|+.|+++|++|++++|+.+.++++.. ....       +.++|++++++++++++++.+++|+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~-~~~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-hhCc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999999888766543 3322       246899999999999999999999999


Q ss_pred             EEEECCccC---CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCC
Q 027991          113 ILINNAGIM---GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKIN  189 (216)
Q Consensus       113 ~li~~Ag~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  189 (216)
                      +||||||..   .+..+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||..+..+.++..      
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-----~~G~IV~isS~~~~~~~~~~~------  142 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFGPWKELS------  142 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTSCCTTCH------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-----ccceeeccccccccccccccc------
Confidence            999999975   355678999999999999999999999999999987     689999999999988766554      


Q ss_pred             CCCccchHHHHHHHHHHHHHHhhh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                          .|+.||+++.+|++.++...
T Consensus       143 ----~Y~asKaal~~lt~~lA~el  162 (252)
T d1zmta1         143 ----TYTSARAGACTLANALSKEL  162 (252)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----ccccccccHHHHHHHHHHHh
Confidence                89999999999999997654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.7e-32  Score=218.64  Aligned_cols=166  Identities=22%  Similarity=0.263  Sum_probs=144.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .++||++|||||++|||+++|+.|+++|++|++++++. +.++++.+++.+.  +.++..+++|++|+++++++++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999987655 4467777777665  56789999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccCCc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~  183 (216)
                      ++|+||++|||||..  .+..+.+.++|++.+++|+.++++++|.++|+|++       .|++++++|..+.. +.+++ 
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~~iii~s~~~~~~~~~~~-  152 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMTGIPNH-  152 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCCSCCSC-
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc-------CCcccccccccccccCCCCc-
Confidence            999999999999986  35567899999999999999999999999999975       46788888766654 44443 


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               ..|+.||+++.+|++.++..
T Consensus       153 ---------~~Y~asK~al~~l~r~lA~e  172 (259)
T d1ja9a_         153 ---------ALYAGSKAAVEGFCRAFAVD  172 (259)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHH
Confidence                     38999999999999999864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=9.9e-32  Score=214.03  Aligned_cols=172  Identities=21%  Similarity=0.293  Sum_probs=143.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH---HcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH--
Q 027991           31 GLTAIVTGATSGIGTETARVLA---LRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN--  105 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~---~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~--  105 (216)
                      -|++|||||++|||+++|++|+   ++|++|++++|+.++++++.+ +...  +.++.+++||++|+++++++++++.  
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            3789999999999999999996   579999999999999887654 4444  4578999999999999999999885  


Q ss_pred             hhcCCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc------CCCCcEEEEEcCCccc
Q 027991          106 IQHHQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGHR  176 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~isS~~~~  176 (216)
                      ..++++|+||||||+..   +..+.+.++|++++++|+.+++.+++.++|+|+++...      ....|+||+++|..+.
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence            46789999999999863   34577899999999999999999999999999876431      2257899999999887


Q ss_pred             ccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          177 LAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      .+.+.       .....+|+.||+++.+|++.++..
T Consensus       159 ~~~~~-------~~~~~~Y~aSKaal~~lt~~la~e  187 (248)
T d1snya_         159 IQGNT-------DGGMYAYRTSKSALNAATKSLSVD  187 (248)
T ss_dssp             STTCC-------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCC-------CCChHHHHHHHHHHHHHHHHHHHH
Confidence            65322       223448999999999999998754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-32  Score=222.24  Aligned_cols=166  Identities=23%  Similarity=0.292  Sum_probs=139.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE---cCCcchHHHHHHHHhh-cCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGV---RDIAAGKDVKETIVKE-IPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~---r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .|++|||||++|||+++|+.|+++|++|++++   |+.+..+...+..... ..+.++..++||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            58899999999999999999999999866554   4444444433333322 2356899999999999999999998754


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                        |.+|++|||||..  .+..+.+.++|++++++|+.|++.++|+++|+|+++     +.|+||++||.++..+.|+.. 
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-----~~G~Iv~isS~~g~~~~~~~~-  153 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLMGLPFND-  153 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTSCCTTCH-
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-----CCCceEEEechhhcCCCCCch-
Confidence              7899999999986  456678999999999999999999999999999987     689999999999999877665 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                               .|++||+++.+|++.++...
T Consensus       154 ---------~Y~asKaal~~l~~~la~El  173 (285)
T d1jtva_         154 ---------VYCASKFALEGLCESLAVLL  173 (285)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHh
Confidence                     89999999999999998653

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.98  E-value=2.5e-32  Score=216.63  Aligned_cols=164  Identities=21%  Similarity=0.211  Sum_probs=137.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .++||++|||||++|||.++|+.|+++|++|++++|+.+++++..++    + +.++.++++|++++++++++++++.+.
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA----L-EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----C-CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----c-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998776554443    3 567889999999999999999999999


Q ss_pred             cCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          108 HHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       108 ~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      +|++|+||||||..  .+..+.+.++|++.+++|+.+++.++|.++|+|.+       .+.|+++||.+.. +.|++.  
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~-------~~~i~~~ss~a~~-~~~~~~--  146 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE-------GGSLVLTGSVAGL-GAFGLA--  146 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT-------TCEEEEECCCTTC-CHHHHH--
T ss_pred             hCCccEeccccccccccchhhhhcccccccccccccccccccccccccccc-------ccceeeccccccc-cccCcc--
Confidence            99999999999986  45668899999999999999999999999999875       4566666665443 334433  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                              .|+.+|+++++|++.++....
T Consensus       147 --------~Y~~sK~al~~lt~~lA~el~  167 (241)
T d2a4ka1         147 --------HYAAGKLGVVGLARTLALELA  167 (241)
T ss_dssp             --------HHHHCSSHHHHHHHHHHHHHT
T ss_pred             --------ccchhhHHHHHHHHHHHHHHh
Confidence                    799999999999999976543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.98  E-value=3.7e-31  Score=213.44  Aligned_cols=167  Identities=20%  Similarity=0.287  Sum_probs=145.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      .|+||++|||||++|||+++|+.|+++|++|++++++. +.++++.+++...  +.++.++++|++|+++++++++++.+
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            38999999999999999999999999999999999875 4567777777665  56899999999999999999999999


Q ss_pred             hcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          107 QHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                      .+|++|++|||+|..  .+..+.+.++|++.+++|+.+++.++|.++|+|.+       .|++++++|..+..+.     
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-------~g~~i~i~s~~~~~~~-----  160 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQAKA-----  160 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGGGTCSS-----
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc-------cccccccccccccccc-----
Confidence            999999999999986  45567899999999999999999999999999985       5789999987765431     


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                          ......|+.+|+++++|++.++..
T Consensus       161 ----~~~~~~Y~asKaal~~ltk~lA~e  184 (272)
T d1g0oa_         161 ----VPKHAVYSGSKGAIETFARCMAID  184 (272)
T ss_dssp             ----CSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHH
Confidence                122337999999999999998764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.98  E-value=3e-31  Score=211.48  Aligned_cols=176  Identities=25%  Similarity=0.269  Sum_probs=145.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.    +.. +.++.++++|++|+++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIK-DSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TCC-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hhh-CCceEEEEEecCCHHHHHHHHHHHHH
Confidence            5679999999999999999999999996  6888999988876543    332 56799999999999999999999988


Q ss_pred             hcCC--ccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc------CCCCcEEEEEcCCcc
Q 027991          107 QHHQ--LNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARK------SGGEGRIINVSSEGH  175 (216)
Q Consensus       107 ~~~~--id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~~~g~iv~isS~~~  175 (216)
                      .++.  +|+||||||+..   +..+.+.++|++.|++|+.|++.+++.++|+|+++...      ....++++++++..+
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            7764  999999999863   45578899999999999999999999999999987432      123578999998777


Q ss_pred             cccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          176 RLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ..+.+...   ....+..+|+.||+++.+|++.++..
T Consensus       156 ~~~~~~~~---~~~~~~~aY~aSKaal~~l~~~la~e  189 (250)
T d1yo6a1         156 SITDNTSG---SAQFPVLAYRMSKAAINMFGRTLAVD  189 (250)
T ss_dssp             CSTTCCST---TSSSCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCccc---ccchhHHHHHHHHHHHHHHHHHHHHH
Confidence            66543322   22334558999999999999998864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=1.8e-31  Score=210.88  Aligned_cols=153  Identities=23%  Similarity=0.202  Sum_probs=131.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.+++           ....++.+|+++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-----------~~~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-----------SGHRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------TCSEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-----------cCCcEEEcchHHH------HHHHHHHh
Confidence            689999999999999999999999999999999998654332           1234678999874      44556778


Q ss_pred             CCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCC
Q 027991          109 HQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (216)
                      +++|+||||||..  .+..+.+.++|++.+++|+.+++.++|.++|.|+++     +.|+||+++|..+..+.++..   
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----~~G~ii~i~S~~~~~~~~~~~---  136 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVISPIENLY---  136 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTTBH---
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-----ccccccccccccccccccccc---
Confidence            9999999999986  356688999999999999999999999999999987     689999999988887755554   


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                             .|+.||+++.+|++.++...
T Consensus       137 -------~Y~asKaal~~ltk~lA~el  156 (234)
T d1o5ia_         137 -------TSNSARMALTGFLKTLSFEV  156 (234)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHH
T ss_pred             -------cchhHHHHHHHHHHHHHHHh
Confidence                   89999999999999988653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.97  E-value=4.2e-30  Score=209.24  Aligned_cols=179  Identities=19%  Similarity=0.113  Sum_probs=157.0

Q ss_pred             cccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHH
Q 027991           21 EEVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        21 ~~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      ..|++..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..+. +.++.++++|++++++++++
T Consensus        15 ~~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~   93 (294)
T d1w6ua_          15 KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNT   93 (294)
T ss_dssp             SCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHH
Confidence            34555678999999999999999999999999999999999999999999999888776 56788999999999999999


Q ss_pred             HHHHHhhcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          101 ASEYNIQHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++.+.+.++++|+||||||...  +..+.+.+++++.+.+|+.+.+.+.+...+.+...    ...+.|++++|.++..+
T Consensus        94 ~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~i~~~ss~~~~~~  169 (294)
T d1w6ua_          94 VSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIYAETG  169 (294)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTHHHHC
T ss_pred             hhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccc----cccccccccccchhhhc
Confidence            9999999999999999999863  45577899999999999999999998888877654    25678888999888887


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                      .++..          .|+.+|+++.+|++.++....
T Consensus       170 ~~~~~----------~YsasKaal~~ltk~lA~ela  195 (294)
T d1w6ua_         170 SGFVV----------PSASAKAGVEAMSKSLAAEWG  195 (294)
T ss_dssp             CTTCH----------HHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccccc----------hHHHHHHHHHHHHHHHHHHHh
Confidence            66544          799999999999999986543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.6e-30  Score=203.48  Aligned_cols=161  Identities=20%  Similarity=0.257  Sum_probs=135.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..++||++|||||++|||+++++.|+++|++|++++|+++++++..+       ...+....+|+.+.+.++..+    +
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~~~~~~~~----~   70 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFA----N   70 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHHH----H
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeeccccccccccc----c
Confidence            35899999999999999999999999999999999999776654322       234778889998876665544    4


Q ss_pred             hcCCccEEEECCccCC--CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccc-cccCCc
Q 027991          107 QHHQLNILINNAGIMG--TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRL-AYHEGI  183 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~  183 (216)
                      .++++|+||||||...  +..+.+.++|++.+++|+.+++.++|.++|+|.++     +.|+||++||..+.. +.++  
T Consensus        71 ~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----~~g~Ii~isS~~~~~~~~~~--  143 (245)
T d2ag5a1          71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSVKGVVN--  143 (245)
T ss_dssp             HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTBCCTT--
T ss_pred             ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-----CCceeeeeechhhccCCccc--
Confidence            5679999999999874  46688999999999999999999999999999987     789999999987754 3333  


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                              ...|+.+|+++++|++.++...
T Consensus       144 --------~~~Y~~sKaal~~l~r~lA~e~  165 (245)
T d2ag5a1         144 --------RCVYSTTKAAVIGLTKSVAADF  165 (245)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hhHHHHHHHHHHHHHHHHHHHh
Confidence                    3389999999999999998653

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-29  Score=200.12  Aligned_cols=171  Identities=19%  Similarity=0.202  Sum_probs=150.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.......+|+.+.+.+++.++++...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            479999999999999999999999999999999999999988877766     456788999999999999999999999


Q ss_pred             cCCccEEEECCccCC--------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-cCCCCcEEEEEcCCccccc
Q 027991          108 HHQLNILINNAGIMG--------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       108 ~~~id~li~~Ag~~~--------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~  178 (216)
                      ++.+|.+++|+++..        +..+.+.++|++++++|+.++++++|++.|+|..+.. ...++|+||++||..+..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence            999999999987642        3345688999999999999999999999999976532 2335789999999999988


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .|+..          .|+.||+++++|++.++...
T Consensus       157 ~~~~~----------~Y~asKaal~~lt~~la~e~  181 (248)
T d2o23a1         157 QVGQA----------AYSASKGGIVGMTLPIARDL  181 (248)
T ss_dssp             CTTCH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCch----------HHHHHHHHHHHHHHHHHHHh
Confidence            76655          89999999999999998654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=3.1e-28  Score=192.33  Aligned_cols=154  Identities=11%  Similarity=0.035  Sum_probs=131.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc-
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-  108 (216)
                      +||++|||||++|||+++|+.|+++|++|++++++.+..            ........+|.++.++.+.+++++.+.+ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999876531            2345567788888888888888776654 


Q ss_pred             -CCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc
Q 027991          109 -HQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR  184 (216)
Q Consensus       109 -~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (216)
                       +++|+||||||...   +..+.+.++|++.|++|+.+++++++.++|+|++       +|+||++||.++..+.++.. 
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~~~~~~-  140 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDGTPGMI-  140 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCTTBH-
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-------ccceeEEccHHHcCCccCCc-
Confidence             47999999999642   3445667899999999999999999999999964       68999999999988766654 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                               .|++||+++.+|++.++..
T Consensus       141 ---------~Y~asKaal~~lt~~la~E  159 (236)
T d1dhra_         141 ---------GYGMAKGAVHQLCQSLAGK  159 (236)
T ss_dssp             ---------HHHHHHHHHHHHHHHHTST
T ss_pred             ---------ccHHHHHHHHHHHHHHHHH
Confidence                     8999999999999998753

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=4.6e-28  Score=191.16  Aligned_cols=152  Identities=12%  Similarity=0.020  Sum_probs=127.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh--hc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI--QH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--~~  108 (216)
                      +++||||||++|||++++++|+++|++|++++|+.+..            ......+.+|+++.+......+.+..  ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            35679999999999999999999999999999987532            23455677888888887777766655  46


Q ss_pred             CCccEEEECCccCC---CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          109 HQLNILINNAGIMG---TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       109 ~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                      ++||+||||||...   +..+.+.++|+.++++|+.+++.++|.++|+|++       +|+||++||..+..+.+++.  
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~Iv~isS~~~~~~~~~~~--  140 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGPTPSMI--  140 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCTTBH--
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-------ceEEEEeccHHhcCCccccc--
Confidence            89999999999752   3344556889999999999999999999999964       68999999999998876655  


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                              .|++||+++.+|++.++.
T Consensus       141 --------~Y~asKaal~~l~~~la~  158 (235)
T d1ooea_         141 --------GYGMAKAAVHHLTSSLAA  158 (235)
T ss_dssp             --------HHHHHHHHHHHHHHHHHS
T ss_pred             --------chHHHHHHHHHHHHHHHH
Confidence                    899999999999999864

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.95  E-value=5.7e-27  Score=189.21  Aligned_cols=171  Identities=16%  Similarity=0.161  Sum_probs=135.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-cchHHHHHHHHhhcCCCeEEE-----------------EEccCCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-AAGKDVKETIVKEIPSAKVDA-----------------MELDLSS   93 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~-----------------~~~Dv~~   93 (216)
                      -++|||||++|||+++|+.|+++|++|++++++. +..+...+++....+ .....                 ..+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcC-CceEEEEeecccccccccccccccccCCC
Confidence            3799999999999999999999999999988765 556777777777653 33333                 4556999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEECCccCC--CCCCCChHH--------------HHHHHHHHHhHHHHHHHHHHHHHHHh
Q 027991           94 LASVRNFASEYNIQHHQLNILINNAGIMG--TPFMLSKDN--------------IELQFATNHLGHFLLTNLLLDTMKKT  157 (216)
Q Consensus        94 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~--------------~~~~~~~N~~~~~~l~~~~~~~~~~~  157 (216)
                      +++++++++++.+++|+||+||||||...  +..+.+.++              +.+.|++|+.++++++|.+.+.+...
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            99999999999999999999999999863  333444333              34579999999999999999987654


Q ss_pred             h-ccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          158 A-RKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       158 ~-~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      + ......++||+++|..+..+.++..          .|+.||+++.+|++.++...
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~----------~Y~asKaal~~lt~~lA~el  208 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYT----------IYTMAKGALEGLTRSAALEL  208 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCcccccccccccCCcccee----------eeccccccchhhhHHHHHHh
Confidence            3 2334578999999998888766654          89999999999999998653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.94  E-value=1.1e-26  Score=185.53  Aligned_cols=160  Identities=22%  Similarity=0.190  Sum_probs=135.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC---cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDI---AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++...  +.++.++.||++|+++++++++++.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~   85 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIG   85 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhcccc
Confidence            357999999999999999999999999 689999875   3455556666544  6789999999999999999999886


Q ss_pred             hhcCCccEEEECCccC--CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc
Q 027991          106 IQHHQLNILINNAGIM--GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      +. +++|.+|||+|..  .+..+.+.++|+.++++|+.+++++.+.+.    +.     +.++||++||.++..|.++..
T Consensus        86 ~~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~-----~~~~iv~~SS~a~~~g~~~~~  155 (259)
T d2fr1a1          86 DD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----EL-----DLTAFVLFSSFASAFGAPGLG  155 (259)
T ss_dssp             TT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TS-----CCSEEEEEEEHHHHTCCTTCT
T ss_pred             cc-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhh----cc-----CCceEeeecchhhccCCcccH
Confidence            65 5899999999987  355678999999999999999999877542    22     578999999999999877765


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                                .|+++|++++.|++.++.
T Consensus       156 ----------~YaAaka~l~~la~~~~~  173 (259)
T d2fr1a1         156 ----------GYAPGNAYLDGLAQQRRS  173 (259)
T ss_dssp             ----------TTHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHhHHHHHHHHHh
Confidence                      789999999999988765

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=6.1e-27  Score=193.33  Aligned_cols=166  Identities=14%  Similarity=0.165  Sum_probs=133.0

Q ss_pred             CCEEEEeC--CCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC----------CCeEEEEE----------
Q 027991           31 GLTAIVTG--ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----------SAKVDAME----------   88 (216)
Q Consensus        31 ~k~~lItG--~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~----------   88 (216)
                      +|++||||  +++|||+++|+.|+++|++|+++++...............+.          ........          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            69999999  557999999999999999999999886654433332222211          01122333          


Q ss_pred             ----------ccCCCHHHHHHHHHHHHhhcCCccEEEECCccCC----CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHH
Q 027991           89 ----------LDLSSLASVRNFASEYNIQHHQLNILINNAGIMG----TPFMLSKDNIELQFATNHLGHFLLTNLLLDTM  154 (216)
Q Consensus        89 ----------~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~----~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  154 (216)
                                +|+++.++++++++++.+.+|+||+||||||...    +..+.+.++|++.+++|+++++.++|.++|+|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                      3666888899999999999999999999999753    45678999999999999999999999999999


Q ss_pred             HHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          155 KKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       155 ~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++       .|+||++||.++..+.|++.         ..|+.||+++++|++.++..
T Consensus       162 ~~-------~GsIv~iss~~~~~~~p~y~---------~~y~asKaal~~ltr~lA~E  203 (329)
T d1uh5a_         162 KP-------QSSIISLTYHASQKVVPGYG---------GGMSSAKAALESDTRVLAYH  203 (329)
T ss_dssp             EE-------EEEEEEEECGGGTSCCTTCT---------TTHHHHHHHHHHHHHHHHHH
T ss_pred             cc-------ccccccceeehhcccccccc---------hhhhhhhccccccchhhHHH
Confidence            64       68999999998888766532         25899999999999998764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3.6e-25  Score=176.45  Aligned_cols=166  Identities=11%  Similarity=0.098  Sum_probs=140.3

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .++||++|||||++  |||.++|+.|+++|++|++++|+++..+ ..+++...  ..+......|+++..++.+.++++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-RVEEFAAQ--LGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-HHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHhh--cCCcceeecccchHHHHHHHHHHhh
Confidence            58999999999998  8999999999999999999999965444 44555544  3456788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCC-------CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          106 IQHHQLNILINNAGIMGTP-------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~-------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      +.++.+|++|||++.....       .+...+.+...+++|+.+.+.+++.+.+.+.+       ++.||++||..+..+
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Ii~iss~~~~~~  151 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA  151 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB
T ss_pred             hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CcEEEEecchhhccC
Confidence            9999999999999985321       13567778999999999999999999999864       568999999988887


Q ss_pred             ccCCccCCCCCCCCccchHHHHHHHHHHHHHHhhh
Q 027991          179 YHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFLQ  213 (216)
Q Consensus       179 ~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~  213 (216)
                      .|...          .|+.||+++++|++.++..-
T Consensus       152 ~~~~~----------~Y~~sKaal~~ltr~lA~el  176 (258)
T d1qsga_         152 IPNYN----------VMGLAKASLEANVRYMANAM  176 (258)
T ss_dssp             CTTTT----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcH----------HHHHHHHHHHHHHHHHHHHh
Confidence            66544          79999999999999987643

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.92  E-value=5e-25  Score=178.86  Aligned_cols=172  Identities=19%  Similarity=0.138  Sum_probs=127.5

Q ss_pred             CCCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCC---------Ce-EEEEEcc--
Q 027991           25 DGIDGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS---------AK-VDAMELD--   90 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~---------~~-~~~~~~D--   90 (216)
                      +.++|+||++|||||++  |||+++|+.|+++|++|++++|+.................         .. -....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            34679999999999876  9999999999999999999999864433222222111100         00 1222233  


Q ss_pred             ------------------CCCHHHHHHHHHHHHhhcCCccEEEECCccC----CCCCCCChHHHHHHHHHHHhHHHHHHH
Q 027991           91 ------------------LSSLASVRNFASEYNIQHHQLNILINNAGIM----GTPFMLSKDNIELQFATNHLGHFLLTN  148 (216)
Q Consensus        91 ------------------v~~~~~~~~~~~~~~~~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~  148 (216)
                                        .++...++++++++.++||+||+||||||..    .+..+.+.++|.+.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              2455567889999999999999999999974    356678999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          149 LLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       149 ~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ++++.|.+       .|+++++++..+....+         .....|..+|+++.++++.+...
T Consensus       162 ~~~~~~~~-------~g~~~~~~~~~~~~~~~---------~~~~~y~~aKaa~~~l~~~~a~e  209 (297)
T d1d7oa_         162 HFLPIMNP-------GGASISLTYIASERIIP---------GYGGGMSSAKAALESDTRVLAFE  209 (297)
T ss_dssp             HHGGGEEE-------EEEEEEEECGGGTSCCT---------TCTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhc-------CCcceeeeehhhccccc---------ccccceecccccccccccccchh
Confidence            99998875       46677777655544321         12237999999999999877654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.92  E-value=4.8e-24  Score=170.21  Aligned_cols=169  Identities=15%  Similarity=0.119  Sum_probs=133.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCC----CHHHHHHHHHHHHhh
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLS----SLASVRNFASEYNIQ  107 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~----~~~~~~~~~~~~~~~  107 (216)
                      ++|||||++|||+++|+.|+++|++|++++|+.++ .+++.+++.... +.+....++|+.    .++.++++++.+.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999998655 567788888776 445666666554    356788888899999


Q ss_pred             cCCccEEEECCccCCCCC-------------CCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          108 HHQLNILINNAGIMGTPF-------------MLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~-------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      +|++|+||||||+..+..             +...+.+...+..|+.+.+...+...+.+..........+.++++++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            999999999999864221             2234567788999999999999999998876654444678889999988


Q ss_pred             ccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          175 HRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      +..+.|++.          .|+.||+++.+|++.++..
T Consensus       162 ~~~~~~~~~----------~Y~asKaal~~lt~~lA~e  189 (266)
T d1mxha_         162 TDLPLPGFC----------VYTMAKHALGGLTRAAALE  189 (266)
T ss_dssp             GGSCCTTCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCcchh----------hhhhhHHHHhhhHHHHHHH
Confidence            887766655          8999999999999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=4.8e-24  Score=167.88  Aligned_cols=159  Identities=21%  Similarity=0.185  Sum_probs=130.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .|++|||||++|||+++|++|+++|++|++++|+.+.              .+....++|+++.....++..+...... 
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~-   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAP-   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------------ccceEeeccccchhhhHHHHHhhhcccc-
Confidence            4899999999999999999999999999999998653              3456789999999999999888776654 


Q ss_pred             ccEEEECCccC------CCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-cCCCCcEEEEEcCCcccccccCCc
Q 027991          111 LNILINNAGIM------GTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAR-KSGGEGRIINVSSEGHRLAYHEGI  183 (216)
Q Consensus       111 id~li~~Ag~~------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~~~~~~  183 (216)
                      .|.++++++..      ........+.|++.+++|+.+++.+++.+.+.+.+... ...+.|+||++||..+..+.++..
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~  145 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA  145 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCH
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCch
Confidence            45556666543      22335678899999999999999999999999765422 233679999999999999876655


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHhhhc
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFFLQC  214 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~~~~  214 (216)
                                .|+.||+++.+|++.++....
T Consensus       146 ----------~Y~asKaal~~lt~~lA~ela  166 (241)
T d1uaya_         146 ----------AYAASKGGVVALTLPAARELA  166 (241)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHh
Confidence                      899999999999999987543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.91  E-value=7.9e-24  Score=169.95  Aligned_cols=168  Identities=11%  Similarity=0.055  Sum_probs=118.1

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATS--GIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lItG~s~--giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .|+||++|||||+|  |||+++|+.|+++|++|++++|++ ++++..+++.++  +....+.++|++++++++++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHH
Confidence            58899999999765  999999999999999999999985 456667777776  4556788999999999999999999


Q ss_pred             hhcCCccEEEECCccCCCC---CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC
Q 027991          106 IQHHQLNILINNAGIMGTP---FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG  182 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~---~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (216)
                      +.++++|++|||+|.....   .+...+.+.....++....+.........+...    +..+.|+++|+.+...+.+..
T Consensus        79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~~~~~~~~~~~  154 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL----NNGASVLTLSYLGSTKYMAHY  154 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEEECGGGTSBCTTC
T ss_pred             HHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc----ccCcceeeecccccccccccc
Confidence            9999999999999986321   122222233333333333332333333332221    123445555555545443333


Q ss_pred             ccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          183 IRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       183 ~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                ..|+.+|+++++|++.++..
T Consensus       155 ----------~~y~asK~al~~ltr~lA~e  174 (274)
T d2pd4a1         155 ----------NVMGLAKAALESAVRYLAVD  174 (274)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------hhhhHHHHHHHHHHHhhHHH
Confidence                      37999999999999988754

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.90  E-value=1.5e-23  Score=167.59  Aligned_cols=164  Identities=18%  Similarity=0.118  Sum_probs=131.5

Q ss_pred             CCCCCCEEEEeC--CCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTG--ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG--~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..|+||++||||  |++|||+++|++|+++|++|++++|+.++..   +++.++. +.+...++||++++++++++++.+
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~---~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRL-PAKAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH---HHHHTTS-SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH---HHHHHHc-CCceeeEeeecccccccccccchh
Confidence            368999999999  4579999999999999999999999876543   3344444 567788999999999999999988


Q ss_pred             Hhh---cCCccEEEECCccCC-------CCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          105 NIQ---HHQLNILINNAGIMG-------TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       105 ~~~---~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      .+.   ++.+|++|||+|+..       +..+.+.+++.+.+++|+.+.+...+...+.+.        ++.+++++|..
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~~  149 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN--------PGGSIVGMDFD  149 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--------EEEEEEEEECC
T ss_pred             hhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc--------ccccccccccc
Confidence            765   467999999999752       234678899999999999999999988877654        33556666666


Q ss_pred             ccccccCCccCCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          175 HRLAYHEGIRFDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                      ...+.|++.          .|+.+|+++.+|++.++..
T Consensus       150 ~~~~~p~~~----------~y~~sK~a~~~ltr~lA~e  177 (268)
T d2h7ma1         150 PSRAMPAYN----------WMTVAKSALESVNRFVARE  177 (268)
T ss_dssp             CSSCCTTTH----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCcccc----------hhhccccchhhccccchhh
Confidence            666555443          8999999999999988764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=5.5e-20  Score=152.58  Aligned_cols=165  Identities=15%  Similarity=0.077  Sum_probs=121.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-----hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .|+||||||+|.||..++++|+++|++|+.++|....     .+....+...  ...++.++++|++|.+++++++++. 
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDTSNLTRILREV-   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh--cCCCeEEEEeecCCHHHHHHHHhcc-
Confidence            3899999999999999999999999999999985432     2222221111  1457999999999999999999876 


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC--Cc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE--GI  183 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~  183 (216)
                          .+|++||.|+..+..  .+.++...++++|+.++.++++++...-.+      +..++|++||... +|.+.  ..
T Consensus        78 ----~~d~v~h~aa~~~~~--~~~~~~~~~~~~Nv~gt~nllea~~~~~~~------~~~r~i~~SS~~v-YG~~~~~~~  144 (357)
T d1db3a_          78 ----QPDEVYNLGAMSHVA--VSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSEL-YGLVQEIPQ  144 (357)
T ss_dssp             ----CCSEEEECCCCCTTT--TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGG-GTTCCSSSB
T ss_pred             ----CCCEEEEeecccccc--hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEEEchhh-hCCCCCCCc
Confidence                689999999986433  245667788999999999999988665332      2457999998543 33332  23


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ..+.+..|...|+.||.+.+.+++.+..
T Consensus       145 ~E~~~~~P~~~Y~~sK~~~E~~~~~~~~  172 (357)
T d1db3a_         145 KETTPFYPRSPYAVAKLYAYWITVNYRE  172 (357)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            3456667888999999999998887654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=1.6e-18  Score=142.80  Aligned_cols=164  Identities=18%  Similarity=0.160  Sum_probs=122.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .|+||||||+|.||..++++|+++|++|+++++....-.+......... ..++.++.+|++|.+.+++++...     +
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-----~   74 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-----K   74 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence            3789999999999999999999999999999865433222222222211 457889999999999999988754     7


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-----ccC
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-----IRF  185 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----~~~  185 (216)
                      +|++||.|+...+..  ..+....++.+|+.++.++++++...-         .-++|++||...+...+..     ...
T Consensus        75 ~d~VihlAa~~~~~~--~~~~~~~~~~~N~~~t~~ll~~~~~~~---------i~~~i~~SS~~vyg~~~~~~~~~~~~e  143 (347)
T d1z45a2          75 IDSVIHFAGLKAVGE--STQIPLRYYHNNILGTVVLLELMQQYN---------VSKFVFSSSATVYGDATRFPNMIPIPE  143 (347)
T ss_dssp             CCEEEECCSCCCHHH--HHHSHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             CCEEEEccccccccc--cccCcccccccchhhhHHHHHHHHhcc---------cceEEeecceeeecCcccCCCCCcccc
Confidence            999999999753222  345556788999999999999986652         3379999996655332221     233


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +.+..+...|+.||.+.+.+.+.+..
T Consensus       144 ~~~~~p~~~Y~~sK~~~E~~~~~~~~  169 (347)
T d1z45a2         144 ECPLGPTNPYGHTKYAIENILNDLYN  169 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCChhHhHHHHHHHHHHHHHH
Confidence            56667788999999999998887754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.79  E-value=1.3e-21  Score=149.21  Aligned_cols=113  Identities=19%  Similarity=0.220  Sum_probs=96.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+++||+++||||++|||.++++.|+++|++|++++|+.+++++..+++....   ++....+|+++.+++++++    
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~----   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAV----   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHT----
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccHHHHHHHh----
Confidence            568999999999999999999999999999999999999999999888887653   3456889999999888765    


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHH
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLL  150 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  150 (216)
                         +++|+||||||+.  ....+.++|.+.+++|+.+.++.+..+
T Consensus        91 ---~~iDilin~Ag~g--~~~~~~e~~~~~~~~nv~~~~~~~~~~  130 (191)
T d1luaa1          91 ---KGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYNAQPPL  130 (191)
T ss_dssp             ---TTCSEEEECCCTT--CCCBCHHHHHTCTTCCEEEECCCSSSC
T ss_pred             ---cCcCeeeecCccc--cccCCHHHHHhhhcceeehhHhhHHHH
Confidence               4789999999974  345689999999999987777655443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.78  E-value=2.8e-18  Score=135.68  Aligned_cols=152  Identities=17%  Similarity=0.128  Sum_probs=114.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH-hhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN-IQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-~~~~~  110 (216)
                      |++|||||++|||+++|++|+++|++|++++|+.++                   ..+|+.+++..+....++. +..+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999999998543                   3469999998888766655 44567


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc------
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR------  184 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~------  184 (216)
                      +|++|||||+..     ..+.+.+..++|..+...+.+...+.+.+.     ..+.+.++++.....-......      
T Consensus        63 id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          63 MDGLVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CSEEEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CcEEEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----ccCcceeeeeccccchhhhhhhhhhhcc
Confidence            999999999753     234577889999999999999999998865     4566777766443321111000      


Q ss_pred             ------------CCCCCCCCccchHHHHHHHHHHHHHHhh
Q 027991          185 ------------FDKINDPSGSFQSSALLLLLLLHLLFFL  212 (216)
Q Consensus       185 ------------~~~~~~~~~~Y~~ska~~~~l~~~~~~~  212 (216)
                                  +........+|+.||+++++|++.++..
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~e  172 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAA  172 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccc
Confidence                        0111112337999999999999998754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=7.2e-18  Score=138.48  Aligned_cols=161  Identities=18%  Similarity=0.111  Sum_probs=120.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|.||..++++|+++|++|++++|............... ...++.++++|++|.+.+.++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh-cCCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            4999999999999999999999999999987543333322222221 1467999999999999999988864     689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc--CCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR--FDKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~--~~~~~~  190 (216)
                      ++||.|+...  ...+.++..+.+++|+.++.++++++...-         -.++|++||...+.+.+....  ......
T Consensus        76 ~ViHlAa~~~--~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~---------v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  144 (338)
T d1udca_          76 TVIHFAGLKA--VGESVQKPLEYYDNNVNGTLRLISAMRAAN---------VKNFIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_dssp             EEEECCSCCC--HHHHHHCHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             EEEECCCccc--hhhHHhCHHHHHHhHHHHHHHHHHHHHHhC---------CCEEEecCcceEEccccccccccccccCC
Confidence            9999999642  122455667899999999999999887762         347899888665544333222  233456


Q ss_pred             CCccchHHHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~~~  210 (216)
                      +...|+.+|.+.+.+.....
T Consensus       145 p~~~Y~~sK~~~e~~~~~~~  164 (338)
T d1udca_         145 PQSPYGKSKLMVEQILTDLQ  164 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHhhhhHHHHHHH
Confidence            77899999999998876544

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=2.2e-17  Score=138.03  Aligned_cols=166  Identities=11%  Similarity=0.070  Sum_probs=118.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC----------------cchHHHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI----------------AAGKDVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~----------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      |++||||||+|.||.+++++|+++|++|+++|+..                ....+......... +.++.++++|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            68999999999999999999999999999997321                11222222222222 46789999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCCC-CCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIMGT-PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      +.++++++..     ++|++||.|+.... ....+.+....++++|+.|+.++++.+...-.+        .++++.||.
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~--------~~~i~~ss~  146 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE--------CHLVKLGTM  146 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT--------CEEEEECCG
T ss_pred             HHHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHhccc--------cceeecccc
Confidence            9999999876     79999999997542 223466778889999999999999988766332        255556654


Q ss_pred             cccccccCCcc--C------------CCCCCCCccchHHHHHHHHHHHHHH
Q 027991          174 GHRLAYHEGIR--F------------DKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       174 ~~~~~~~~~~~--~------------~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...........  |            ..+..+...|+.||.+.+.++..+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~  197 (393)
T d1i24a_         147 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTC  197 (393)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccc
Confidence            43322111111  1            1245666789999999998887654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.3e-17  Score=135.44  Aligned_cols=164  Identities=14%  Similarity=0.070  Sum_probs=118.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-----hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-----GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      |+||||||+|.||..++++|+++|++|+.++|....     .+......... ...++.++.+|++|.+.+.+++++.  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh-ccCCcEEEEeecCCchhhHHHHhhc--
Confidence            455999999999999999999999999999986432     22221111111 1357899999999999999999876  


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--cc
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--IR  184 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~  184 (216)
                         .+++++|.++...  ...+.+.....+++|+.++.++++++......      ...++|++||.+- +|.+..  ..
T Consensus        79 ---~~~~v~~~~a~~~--~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~------~~~~~i~~SS~~v-yg~~~~~~~~  146 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSH--VKISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSEL-YGKVQEIPQK  146 (347)
T ss_dssp             ---CCSEEEECCSCCC--HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGG-TCSCSSSSBC
T ss_pred             ---ccceeeeeeeccc--cchhhccchhhhhhHHHHHHHHHHHHHHcCCC------CCcEEEEecchhe-ecCCCCCCCC
Confidence               6789999988642  22245556677899999999999888766432      2347999988543 443332  33


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+.+..|...|+.||.+.+.++..+.
T Consensus       147 E~~~~~P~~~Yg~sK~~aE~~~~~~~  172 (347)
T d1t2aa_         147 ETTPFYPRSPYGAAKLYAYWIVVNFR  172 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            45667788899999999998887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=1.1e-16  Score=130.80  Aligned_cols=169  Identities=14%  Similarity=0.024  Sum_probs=122.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc-----chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA-----AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      .|++|||||+|.||.++++.|+++|++|+.++|...     +......... ......+.+..+|+++.+.+.+.++.. 
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Di~~~~~~~~~~~~~-   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH-NVNKALMKLHYADLTDASSLRRWIDVI-   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhh-hccccceEEEEccccCHHHHHHHHhhh-
Confidence            389999999999999999999999999999998532     2211111111 111356889999999999999998865 


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                          ++|++||.|+.....  .+.++....+++|..+...+..++.....+.    ....+++..||.......+.....
T Consensus        79 ----~~D~Vih~Aa~~~~~--~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~~~~ss~~~~~~~~~~~~E  148 (339)
T d1n7ha_          79 ----KPDEVYNLAAQSHVA--VSFEIPDYTADVVATGALRLLEAVRSHTIDS----GRTVKYYQAGSSEMFGSTPPPQSE  148 (339)
T ss_dssp             ----CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             ----ccchhhhcccccccc--ccccCccccccccccccchhhhhhhhccccc----ccceeeeecccceecccCCCCCCC
Confidence                799999999974322  2445667889999999999999888776543    123345555555444333444555


Q ss_pred             CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 ~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      +.+..|...|+.+|.+.+.++..+..
T Consensus       149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~  174 (339)
T d1n7ha_         149 TTPFHPRSPYAASKCAAHWYTVNYRE  174 (339)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHH
Confidence            66777888999999999988876654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.72  E-value=2.6e-17  Score=135.32  Aligned_cols=162  Identities=13%  Similarity=0.026  Sum_probs=118.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      -+||+||||||+|.||..++++|+++|++|+.+.|+.++...................+..|++|.+.+.+++.      
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------
Confidence            45899999999999999999999999999999999877666555544444445566678889999988776653      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-Cc----
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GI----  183 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~----  183 (216)
                       .+|+++|+++.....     ......+++|+.++.++++.+...-        .-.++|++||..+..+... ..    
T Consensus        83 -~~~~v~~~a~~~~~~-----~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~~~i~~SS~~~~~~~~~~~~~~~~  148 (342)
T d1y1pa1          83 -GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAATP--------SVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             -TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTCT--------TCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             -cchhhhhhccccccc-----ccccccccchhhhHHHHHHhhhccc--------ccccccccccceeeccCCCCCCCccc
Confidence             689999999975322     2234567889999999888876642        2358999999765443221 11    


Q ss_pred             ----------------cCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          184 ----------------RFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ----------------~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                                      .......+...|+.||.+.+.++..+.
T Consensus       149 ~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~  191 (342)
T d1y1pa1         149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM  191 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhh
Confidence                            122334455589999999998877664

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.71  E-value=2e-17  Score=137.18  Aligned_cols=170  Identities=15%  Similarity=0.098  Sum_probs=118.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEE-EEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVV-MGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +||||||+|.||.+++++|++.|++|+ .+++......  .+.+.......++.++.+|++|.+.++++++..     .+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            589999999999999999999999754 4554321110  011111222457999999999999999998865     68


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC---------
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG---------  182 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  182 (216)
                      |++||+|+..+.  ..+.++..+++++|+.++.++++.+.....+.........++|++||...+-.....         
T Consensus        75 d~VihlAa~~~~--~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (361)
T d1kewa_          75 DAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL  152 (361)
T ss_dssp             SEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred             CEEEECccccch--hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCC
Confidence            999999997532  224455678899999999999999988754210000023589999986644322111         


Q ss_pred             --ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 --IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 --~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                        ....+...|...|+.||.+.+.++..+..
T Consensus       153 ~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~  183 (361)
T d1kewa_         153 PLFTETTAYAPSSPYSASKASSDHLVRAWRR  183 (361)
T ss_dssp             CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence              11245566777899999999999877653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.71  E-value=3.4e-16  Score=127.32  Aligned_cols=160  Identities=15%  Similarity=0.067  Sum_probs=115.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      +||||||+|.||..++++|+++|++|+.+++.... ..+....+..   ..++.++.+|++|.+.+.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            68999999999999999999999999998854322 2222222322   457899999999999999998876     68


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC---------
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG---------  182 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  182 (216)
                      |++||+|+.....  ...++..+.+++|+.|+.++++++...-         ..+.|++||.....+.+..         
T Consensus        74 d~Vih~aa~~~~~--~~~~~~~~~~~~Nv~gt~nll~~~~~~~---------~~~~i~~sS~~~~~~~~~~~~~~~~~~~  142 (338)
T d1orra_          74 DSCFHLAGQVAMT--TSIDNPCMDFEINVGGTLNLLEAVRQYN---------SNCNIIYSSTNKVYGDLEQYKYNETETR  142 (338)
T ss_dssp             SEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHC---------TTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             ceEEeeccccccc--ccccChHHHHHHHHHHHHHHHHhhhccc---------cccccccccccccccccccccccccccc
Confidence            9999999985321  2344567899999999999999877653         3355666665544433211         


Q ss_pred             ---------ccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          183 ---------IRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       183 ---------~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                               ........+...|+.+|...+.+......
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~  180 (338)
T d1orra_         143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR  180 (338)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCcccCCccccccccccccchhhhhhhhhhh
Confidence                     11234445677899999998887765543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=2.1e-16  Score=128.18  Aligned_cols=162  Identities=15%  Similarity=0.031  Sum_probs=118.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |+||||||+|.||..++++|+++|++|+.++|......  .+.+.......++.++.+|++|.+.+.+.+...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cc
Confidence            78999999999999999999999999999998754321  122222222457899999999999999988876     57


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc--cCCCCC
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI--RFDKIN  189 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~--~~~~~~  189 (216)
                      ++++|.|+.....  ...++....+..|+.++..+++++...-.+        .++++.|| ....+.....  ..+.+.
T Consensus        74 ~~~~~~a~~~~~~--~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~--------~~~i~~Ss-~~~~~~~~~~~~~E~~~~  142 (321)
T d1rpna_          74 QEVYNLAAQSFVG--ASWNQPVTTGVVDGLGVTHLLEAIRQFSPE--------TRFYQAST-SEMFGLIQAERQDENTPF  142 (321)
T ss_dssp             SEEEECCSCCCHH--HHTTSHHHHHHHHTHHHHHHHHHHHHHCTT--------SEEEEEEE-GGGGCSCSSSSBCTTSCC
T ss_pred             ccccccccccccc--ccccchHHHHhhhhhchHHHHHHHHHhCCC--------cccccccc-hhhcCcccCCCCCCCCCc
Confidence            8888888764321  123445778999999999999988766332        25555554 4444443332  345666


Q ss_pred             CCCccchHHHHHHHHHHHHHHh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .+...|+.+|.+.+.++..+.+
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~  164 (321)
T d1rpna_         143 YPRSPYGVAKLYGHWITVNYRE  164 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cccChhHHHHHHHHHHHHHHHh
Confidence            7888999999999988877653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.70  E-value=1.6e-16  Score=130.65  Aligned_cols=165  Identities=16%  Similarity=0.012  Sum_probs=122.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+||+||||||+|.||..+++.|+++|++|++++|+..+.....+....   ...+.++.+|++|++.+.++++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhhc----
Confidence            4789999999999999999999999999999999987765544333211   346889999999999999988875    


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCcc--CC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIR--FD  186 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~--~~  186 (216)
                       .+|+++|.|+.....  .+.+.....+++|+.++..+++++...-.        ...+++.|+............  .+
T Consensus        79 -~~~~v~~~aa~~~~~--~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~--------~~~~~~~s~~~~~~~~~~~~~~~~~  147 (356)
T d1rkxa_          79 -QPEIVFHMAAQPLVR--LSYSEPVETYSTNVMGTVYLLEAIRHVGG--------VKAVVNITSDKCYDNKEWIWGYREN  147 (356)
T ss_dssp             -CCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHCC--------CCEEEEECCGGGBCCCCSSSCBCTT
T ss_pred             -hhhhhhhhhcccccc--ccccCCccccccccccchhhhhhhhcccc--------ccccccccccccccccccccccccc
Confidence             689999999974322  24556778899999999999998876522        234555554433333322222  34


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHh
Q 027991          187 KINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       187 ~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ....+...|+.+|...+.++..+..
T Consensus       148 ~~~~p~~~y~~~k~~~e~~~~~~~~  172 (356)
T d1rkxa_         148 EAMGGYDPYSNSKGCAELVTSSYRN  172 (356)
T ss_dssp             SCBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCccccccccchhhhhHHhh
Confidence            5566777899999998887766543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.3e-16  Score=126.13  Aligned_cols=163  Identities=15%  Similarity=0.087  Sum_probs=117.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC------CcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRD------IAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      |+||||||+|.||.+++++|+++|++|+.+++.      ........+.+... ...++.++++|++|.+.+++++... 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKKY-   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeecccccccccccccc-
Confidence            789999999999999999999999999999752      12222222322222 2567899999999999999888763 


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccC
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRF  185 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (216)
                          .+|+++|.|+..+.  ..+.++..+.+++|+.++.++++++...         +-.+++++||.............
T Consensus        81 ----~~~~i~h~Aa~~~~--~~~~~~p~~~~~~Nv~gt~~l~~~~~~~---------~v~~~i~~ss~~~~~~~~~~~~~  145 (346)
T d1ek6a_          81 ----SFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMKAH---------GVKNLVFSSSATVYGNPQYLPLD  145 (346)
T ss_dssp             ----CEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             ----ccccccccccccCc--HhhHhCHHHHHHhhhcccccccchhhhc---------Ccccccccccceeeecccccccc
Confidence                68899999997542  2244556788999999999998887554         23478888876555443332222


Q ss_pred             --CCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          186 --DKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       186 --~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                        .....+...|+.+|...+...+.+..
T Consensus       146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~  173 (346)
T d1ek6a_         146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQ  173 (346)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCChHHHHHHHHHHHHHHHHH
Confidence              23345566899999999987776543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=1.7e-15  Score=124.02  Aligned_cols=165  Identities=13%  Similarity=0.054  Sum_probs=122.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC---CCeEEEEEccCCCHHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP---SAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..+.|++|||||+|.||..++++|.++|++|+.++|....-....+.+.....   ...+.++.+|+.|.........  
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--   90 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--   90 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--
Confidence            35678999999999999999999999999999999754333333333322221   2468899999999887665443  


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-Cc
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GI  183 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~  183 (216)
                           ..+.++|.++....  ..+.++....+++|+.++.++++++...         +..++|++||...+...+. ..
T Consensus        91 -----~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---------~~~~~i~~SS~~vyg~~~~~~~  154 (341)
T d1sb8a_          91 -----GVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA---------KVQSFTYAASSSTYGDHPGLPK  154 (341)
T ss_dssp             -----TCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGTTCCCSSB
T ss_pred             -----cccccccccccccc--cccccCccchhheeehhHHHHHHHHHhc---------CCceEEEcccceeeCCCCCCCc
Confidence                 67889988876432  1256677889999999999999988655         2348999998765433322 24


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ..+.+..|...|+.||.+.+.++..+.
T Consensus       155 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~  181 (341)
T d1sb8a_         155 VEDTIGKPLSPYAVTKYVNELYADVFS  181 (341)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHH
Confidence            456777888899999999999887665

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=2.2e-15  Score=123.27  Aligned_cols=153  Identities=14%  Similarity=0.049  Sum_probs=110.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++|||||+|.||..++++|+++|+ +|+.+++.........       ...++.++++|+++.+++.+.+.+      ++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~------~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK------KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH------HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHh------CC
Confidence            589999999999999999999995 8999988765433222       146799999999987776553321      58


Q ss_pred             cEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--------c
Q 027991          112 NILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--------I  183 (216)
Q Consensus       112 d~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------~  183 (216)
                      |++||+|+......  ..++....+++|+.++.++++.+...          +-+++++||...+.+.+..        .
T Consensus        69 d~Vih~a~~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~----------~~~~~~~ss~~~~~~~~~~~~~~~~~~~  136 (342)
T d2blla1          69 DVVLPLVAIATPIE--YTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSDKYFDEDHSNL  136 (342)
T ss_dssp             SEEEECBCCCCHHH--HHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCCSSBCTTTCCC
T ss_pred             Cccccccccccccc--cccCCccccccccccccccccccccc----------cccccccccccccccccccccccccccc
Confidence            99999999854321  34445678999999999999987554          3366777775554443222        1


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      .+.....+...|+.||.+.+.++..+.
T Consensus       137 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~  163 (342)
T d2blla1         137 IVGPVNKPRWIYSVSKQLLDRVIWAYG  163 (342)
T ss_dssp             BCCCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCcchhhhcccchhhhhhhhh
Confidence            123334456689999999998887665

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=3e-15  Score=121.01  Aligned_cols=143  Identities=10%  Similarity=0.051  Sum_probs=105.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .|+||||||+|.||.+|+++|+++|+.|+++++..+                      +|+.+.+.+.++++.-     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCHHHHHHHHhhc-----C
Confidence            478999999999999999999999999887654421                      5899999998887753     6


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-----cc-
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-----IR-  184 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----~~-  184 (216)
                      +|.++|.|+..+... ....+..+.+++|+.++.++++++...         .-.++|++||.+.+.+....     .. 
T Consensus        55 ~d~v~~~a~~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~v~~~i~~SS~~vyg~~~~~~~~E~~~~  124 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIV-ANNTYPADFIYQNMMIESNIIHAAHQN---------DVNKLLFLGSSCIYPKLAKQPMAESELL  124 (315)
T ss_dssp             CSEEEECCCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGSCTTCCSSBCGGGTT
T ss_pred             CCEEEEcchhccccc-cchhhHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEECCceEcCCCCCCCccCCccc
Confidence            899999998753221 234455677899999999999888665         23479999997765433221     11 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHH
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLF  210 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~  210 (216)
                      ...+..+...|+.||.+.+.+++.+.
T Consensus       125 ~~~~~~~~~~Y~~sK~~~E~~~~~~~  150 (315)
T d1e6ua_         125 QGTLEPTNEPYAIAKIAGIKLCESYN  150 (315)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            11223334579999999999887765

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.61  E-value=3.2e-15  Score=123.37  Aligned_cols=157  Identities=17%  Similarity=0.058  Sum_probs=115.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++.+||||||+|.||..++++|+++|++|+++++.......      ..  .....+..+|+.+.+.+.++++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~------~~--~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT------ED--MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC------GG--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh------hh--cccCcEEEeechhHHHHHHHhh-------
Confidence            56789999999999999999999999999999876543110      00  1234677889999888776654       


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCc------
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGI------  183 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~------  183 (216)
                      ++|++||.|+...... ...+.....+.+|+.++..++.++...-         ..++|++||...+...+...      
T Consensus        79 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~n~~gt~~ll~~~~~~~---------vk~~i~~SS~~~~~~~~~~~~~~~~~  148 (363)
T d2c5aa1          79 GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMIEAARING---------IKRFFYASSACIYPEFKQLETTNVSL  148 (363)
T ss_dssp             TCSEEEECCCCCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEEEEGGGSCGGGSSSSSSCEE
T ss_pred             cCCeEeeccccccccc-ccccccccccccccchhhHHHHhHHhhC---------cccccccccccccccccccccccccc
Confidence            6899999998753321 1234567788999999999999887663         34899999966554332211      


Q ss_pred             --cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 --RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 --~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                        ....+..|...|+.||.+.+.+++.+..
T Consensus       149 ~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~  178 (363)
T d2c5aa1         149 KESDAWPAEPQDAFGLEKLATEELCKHYNK  178 (363)
T ss_dssp             CGGGGSSBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence              1234556778999999999988877654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.61  E-value=2.6e-15  Score=123.27  Aligned_cols=157  Identities=19%  Similarity=0.165  Sum_probs=109.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC--Ccc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRD--IAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~--~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |+||||||+|.||..++++|+++|++|.++.+.  ... .....    ....+.++.++.+|++|.+.+.+++.      
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~----~~~~~~~i~~~~~Di~d~~~~~~~~~------   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----EAILGDRVELVVGDIADAELVDKLAA------   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----GGGCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH----HHhhcCCeEEEEccCCCHHHHHHHHh------
Confidence            689999999999999999999999865444332  111 01100    11225689999999999999888764      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc--c-------
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA--Y-------  179 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~-------  179 (216)
                       ..|.++|.|+.....  ...++..+.+++|+.++.+++..+...          +.++|++||...+..  .       
T Consensus        73 -~~~~v~~~a~~~~~~--~~~~~~~~~~~~N~~g~~nll~~~~~~----------~~k~i~~ss~~vyg~~~~~~~~~~~  139 (346)
T d1oc2a_          73 -KADAIVHYAAESHND--NSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGH  139 (346)
T ss_dssp             -TCSEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             -hhhhhhhhhhccccc--chhhCcccceeeehHhHHhhhhhhccc----------cccccccccceEecccCcccccccc
Confidence             578899999875322  123445678999999999999877555          236777776543321  1       


Q ss_pred             ----cCCccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          180 ----HEGIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       180 ----~~~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                          ......+....|...|+.+|.+.+.+++.+.+
T Consensus       140 ~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~  175 (346)
T d1oc2a_         140 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVR  175 (346)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             ccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence                11233455667778899999999998876653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.61  E-value=1.3e-14  Score=120.63  Aligned_cols=166  Identities=14%  Similarity=0.104  Sum_probs=116.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEEc---------CCcchHHHHHHHHhhc------CCCeEEEEEccCCCH
Q 027991           31 GLTAIVTGATSGIGTETARVLAL-RGVHVVMGVR---------DIAAGKDVKETIVKEI------PSAKVDAMELDLSSL   94 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~-~g~~Vi~~~r---------~~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~   94 (216)
                      +.+||||||+|.||..++++|++ .|++|+++|+         ..+..++....+....      ...++.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            34699999999999999999986 6899999874         1122233332232211      134688999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991           95 ASVRNFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus        95 ~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      +.++++++..    .++|++||.|+.....  ...+.....+++|+.++..+++++...-         ..++++++|..
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~--~~~~~~~~~~~~N~~~t~~~l~~~~~~~---------~~~~~~~~s~~  146 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLLHK---------CDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEEEEGG
T ss_pred             HHhhhhhhcc----ceeehhhccccccccc--ccccccccccccccccccccchhhhccC---------Ccccccccccc
Confidence            9988888654    4789999999975322  2344556788999999999998887653         33677766654


Q ss_pred             ccccccC--------CccCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          175 HRLAYHE--------GIRFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       175 ~~~~~~~--------~~~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .....+.        .........|...|+.+|.+.+.+++.+..
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~  191 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAE  191 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHH
Confidence            4332211        122345667788999999999999887653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6e-15  Score=119.62  Aligned_cols=153  Identities=14%  Similarity=0.087  Sum_probs=104.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .|++|||||+|.||..++++|+++|++|+.+++......+....   .....++.....|+.+.            .+.+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~------------~~~~   65 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH---WIGHENFELINHDVVEP------------LYIE   65 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG---GTTCTTEEEEECCTTSC------------CCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH---hcCCCceEEEehHHHHH------------HHcC
Confidence            37899999999999999999999999999998743322211111   11133456666665432            1236


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC-------c
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG-------I  183 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------~  183 (216)
                      +|++||.|+......  +.++..+.+++|+.++.++++++...          +-++|++||.+.+ +.+..       .
T Consensus        66 ~d~VihlAa~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~~~~~----------~~k~I~~SS~~vy-~~~~~~~~~e~~~  132 (312)
T d2b69a1          66 VDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVY-GDPEVHPQSEDYW  132 (312)
T ss_dssp             CSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGG-BSCSSSSBCTTCC
T ss_pred             CCEEEECcccCCchh--HHhCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEEChhee-cCCCCCCCCcccc
Confidence            899999999754211  23455678999999999999877543          2379999985443 32221       1


Q ss_pred             cCCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          184 RFDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       184 ~~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      ....+..|...|+.||.+.+.++..+..
T Consensus       133 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~  160 (312)
T d2b69a1         133 GHVNPIGPRACYDEGKRVAETMCYAYMK  160 (312)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            1224456778999999999999887654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.2e-14  Score=109.48  Aligned_cols=139  Identities=15%  Similarity=0.047  Sum_probs=95.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |..|+++||||+|+||.+++++|+++|++|.+..|+.++++..        ....+.++.+|++|.+++.++++      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc------
Confidence            4568999999999999999999999999999999998765321        13568899999999999888765      


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                       +.|++|+++|...+....         +++..++.+++    +.++++     +-.++|++||.......+..      
T Consensus        67 -~~d~vi~~~g~~~~~~~~---------~~~~~~~~~l~----~aa~~~-----~v~r~i~~ss~~~~~~~~~~------  121 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDLSPT---------TVMSEGARNIV----AAMKAH-----GVDKVVACTSAFLLWDPTKV------  121 (205)
T ss_dssp             -TCSEEEECCCCTTCCSCC---------CHHHHHHHHHH----HHHHHH-----TCCEEEEECCGGGTSCTTCS------
T ss_pred             -CCCEEEEEeccCCchhhh---------hhhHHHHHHHH----HHHHhc-----CCCeEEEEeeeeccCCCccc------
Confidence             679999999975433211         12333333444    444444     45689999986554332221      


Q ss_pred             CCCCccchHHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLLL  206 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~  206 (216)
                      ......|...|...+.+.
T Consensus       122 ~~~~~~~~~~~~~~e~~l  139 (205)
T d1hdoa_         122 PPRLQAVTDDHIRMHKVL  139 (205)
T ss_dssp             CGGGHHHHHHHHHHHHHH
T ss_pred             cccccccchHHHHHHHHH
Confidence            112235566666555443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.52  E-value=6.8e-14  Score=113.54  Aligned_cols=158  Identities=16%  Similarity=0.085  Sum_probs=112.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEE------EEEcCCcc-hHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVV------MGVRDIAA-GKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi------~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +||||||+|.||..+++.|+++|++|.      ..++.... -.....   ......++.++.+|.++........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA---PVDADPRLRFVHGDIRDAGLLAREL----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG---GGTTCTTEEEEECCTTCHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhh---hhhcCCCeEEEEeccccchhhhccc----
Confidence            589999999999999999999997553      33322111 011011   1112467999999999988776543    


Q ss_pred             hhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-Ccc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIR  184 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~  184 (216)
                         ..+|.++|.|+.....  ...+...+.+++|+.++.++++++...         +..++|++||...+.+... ...
T Consensus        75 ---~~~d~vi~~a~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~---------~~~~~I~~Ss~~~yg~~~~~~~~  140 (322)
T d1r6da_          75 ---RGVDAIVHFAAESHVD--RSIAGASVFTETNVQGTQTLLQCAVDA---------GVGRVVHVSTNQVYGSIDSGSWT  140 (322)
T ss_dssp             ---TTCCEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCCCSSSCBC
T ss_pred             ---cccceEEeeccccccc--ccccchHHHhhhhHHHHHHHHHHHHHc---------CCceEEEeecceeecCCCCCCCC
Confidence               3789999999874322  244556678899999999999988654         2347999988665543322 344


Q ss_pred             CCCCCCCCccchHHHHHHHHHHHHHHh
Q 027991          185 FDKINDPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       185 ~~~~~~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .+.+..|...|+.||.+.+.+++.+..
T Consensus       141 E~~~~~p~~~Y~~sK~~~E~~~~~~~~  167 (322)
T d1r6da_         141 ESSPLEPNSPYAASKAGSDLVARAYHR  167 (322)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            567778888999999999998887653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.3e-14  Score=110.52  Aligned_cols=143  Identities=12%  Similarity=0.042  Sum_probs=103.7

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      +.+...|.+|++|||||+|.||.+++++|+++|.  +|++..|+.......      .  ...+....+|+.+.+++.+.
T Consensus         6 ~~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~~~~~~~   77 (232)
T d2bkaa1           6 LREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKLDDYASA   77 (232)
T ss_dssp             HHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGGGGGGGG
T ss_pred             HHHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeeccccccccccc
Confidence            4455668899999999999999999999999995  899999986543211      0  23567777888886655433


Q ss_pred             HHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccccc
Q 027991          101 ASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYH  180 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  180 (216)
                      +       .+.|++||++|...     ......+..++|+.++..+++.+...         +-.++|++|+......  
T Consensus        78 ~-------~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~fi~~Ss~~~~~~--  134 (232)
T d2bkaa1          78 F-------QGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKAG---------GCKHFNLLSSKGADKS--  134 (232)
T ss_dssp             G-------SSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT--
T ss_pred             c-------cccccccccccccc-----cccchhhhhhhcccccceeeeccccc---------CccccccCCccccccC--
Confidence            3       47899999998631     33445667889999999988877543         3458999998654321  


Q ss_pred             CCccCCCCCCCCccchHHHHHHHHHH
Q 027991          181 EGIRFDKINDPSGSFQSSALLLLLLL  206 (216)
Q Consensus       181 ~~~~~~~~~~~~~~Y~~ska~~~~l~  206 (216)
                                ....|+.+|...+...
T Consensus       135 ----------~~~~Y~~~K~~~E~~l  150 (232)
T d2bkaa1         135 ----------SNFLYLQVKGEVEAKV  150 (232)
T ss_dssp             ----------CSSHHHHHHHHHHHHH
T ss_pred             ----------ccchhHHHHHHhhhcc
Confidence                      2236899998777544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.45  E-value=1.8e-13  Score=108.82  Aligned_cols=140  Identities=15%  Similarity=0.077  Sum_probs=101.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|.||.++++.|.++|.. +.++++...                   +.+|++|.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE-------------------FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS-------------------SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc-------------------ccCcCCCHHHHHHHHHHc-----CCC
Confidence            5999999999999999999999864 444544321                   236999999999998876     689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccC-CccCCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHE-GIRFDKINDP  191 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~~~~~~~~  191 (216)
                      ++||+||.....  .+.+.....+++|+.++..+.+++...          +.+++++||.....+... .........+
T Consensus        57 ~Vih~Aa~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~~~ss~~~~~~~~~~~~~E~~~~~p  124 (298)
T d1n2sa_          57 VIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANET----------GAWVVHYSTDYVFPGTGDIPWQETDATSP  124 (298)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTTT----------TCEEEEEEEGGGSCCCTTCCBCTTSCCCC
T ss_pred             EEEEeccccccc--ccccCccccccccccccccchhhhhcc----------ccccccccccccccCCCCCCCccccccCC
Confidence            999999976322  133445678899999998888876432          446777777654443322 2334566677


Q ss_pred             CccchHHHHHHHHHHHHH
Q 027991          192 SGSFQSSALLLLLLLHLL  209 (216)
Q Consensus       192 ~~~Y~~ska~~~~l~~~~  209 (216)
                      ...|+.+|.+.+.+.+..
T Consensus       125 ~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_         125 LNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             SSHHHHHHHHHHHHHHHH
T ss_pred             CchHhhhhhhhhhhHHhh
Confidence            889999999888666543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.35  E-value=9.4e-12  Score=98.13  Aligned_cols=135  Identities=19%  Similarity=0.254  Sum_probs=96.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      ++|||||+|.||..++++|.++|++|+.++|+.                       +|++|.+++++++++.     .+|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CCC
Confidence            499999999999999999999999999988752                       4899999999988865     689


Q ss_pred             EEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCC--ccCCCCCC
Q 027991          113 ILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEG--IRFDKIND  190 (216)
Q Consensus       113 ~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~~~~~~~  190 (216)
                      ++||+|+.....  .+.......+..|+.....+...+...          ...+++.||... .+.+..  ........
T Consensus        55 ~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~----------~~~~~~~ss~~v-~~~~~~~~~~e~~~~~  121 (281)
T d1vl0a_          55 VVINCAAHTAVD--KCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYV-FDGEAKEPITEFDEVN  121 (281)
T ss_dssp             EEEECCCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGG-SCSCCSSCBCTTSCCC
T ss_pred             EEEeeccccccc--cccccchhhcccccccccccccccccc----------ccccccccccee-eecccccccccccccc
Confidence            999999875321  233444566777877777666655443          235555555433 333332  23345566


Q ss_pred             CCccchHHHHHHHHHHHH
Q 027991          191 PSGSFQSSALLLLLLLHL  208 (216)
Q Consensus       191 ~~~~Y~~ska~~~~l~~~  208 (216)
                      +...|+.+|...+.+.+.
T Consensus       122 ~~~~~~~~k~~~e~~~~~  139 (281)
T d1vl0a_         122 PQSAYGKTKLEGENFVKA  139 (281)
T ss_dssp             CCSHHHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhHHHHHHHH
Confidence            777899999888776654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.29  E-value=1.5e-11  Score=94.23  Aligned_cols=122  Identities=16%  Similarity=0.105  Sum_probs=86.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCe--EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVH--VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++||||||+|+||.++++.|+++|++  |+...|+.++.+.    +     ..++.++.+|+++.+.+.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~-----~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-----GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-----TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c-----cCCcEEEEeeeccccccccccc-------
Confidence            68999999999999999999999976  4445666543221    1     3467899999999999887775       


Q ss_pred             CccEEEECCccCCCC-----------CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          110 QLNILINNAGIMGTP-----------FMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       110 ~id~li~~Ag~~~~~-----------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++|.+||+++.....           .......+.....+|+.++..+.......         ..+...+.++.....+
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~s~~~~~~~  138 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------GVKHIVVVGSMGGTNP  138 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------TCSEEEEEEETTTTCT
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc---------cccccccccccccCCC
Confidence            689999999864210           11122334556778888888877666554         3456777776555443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.21  E-value=1.5e-10  Score=92.09  Aligned_cols=84  Identities=13%  Similarity=0.085  Sum_probs=63.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .++||||||+|.||.+++++|+++|++|+++.|+.........+.........+.++++|++|.+.+.+.+.       +
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            346999999999999999999999999999999765432222222222224568899999999998877665       6


Q ss_pred             ccEEEECCccC
Q 027991          111 LNILINNAGIM  121 (216)
Q Consensus       111 id~li~~Ag~~  121 (216)
                      .+.++++++..
T Consensus        76 ~~~~~~~~~~~   86 (312)
T d1qyda_          76 VDVVISALAGG   86 (312)
T ss_dssp             CSEEEECCCCS
T ss_pred             cchhhhhhhhc
Confidence            78888888764

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.13  E-value=1.3e-10  Score=92.11  Aligned_cols=151  Identities=14%  Similarity=0.072  Sum_probs=93.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH--hhcCC
Q 027991           34 AIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN--IQHHQ  110 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~--~~~~~  110 (216)
                      ||||||+|.||..++++|+++|. +|+.+++-....+. . .+.    ..    ..+|..+.+..   .+...  ..+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~-~~~----~~----~~~~~~~~~~~---~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-NLV----DL----NIADYMDKEDF---LIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H-HHH----TS----CCSEEEEHHHH---HHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h-ccc----cc----chhhhccchHH---HHHHhhhhcccc
Confidence            89999999999999999999996 68887644332111 1 111    11    11233333332   33222  34567


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccc-cCCccCCCCC
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAY-HEGIRFDKIN  189 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~~~~~~~  189 (216)
                      +++++|.|+......    .......+.|+.+...+...+...-         . ++++.||.....+. +.........
T Consensus        69 ~~~i~~~aa~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~---------i-~~v~~ss~~~~~~~~~~~~~~~~~~  134 (307)
T d1eq2a_          69 VEAIFHEGACSSTTE----WDGKYMMDNNYQYSKELLHYCLERE---------I-PFLYASSAATYGGRTSDFIESREYE  134 (307)
T ss_dssp             CCEEEECCSCCCTTC----CCHHHHHHHTHHHHHHHHHHHHHHT---------C-CEEEEEEGGGGTTCCSCBCSSGGGC
T ss_pred             hhhhhhhcccccccc----ccccccccccccccccccccccccc---------c-ccccccccccccccccccccccccc
Confidence            899999998643222    2234466777777777776655442         2 35555554444433 3344455666


Q ss_pred             CCCccchHHHHHHHHHHHHHHh
Q 027991          190 DPSGSFQSSALLLLLLLHLLFF  211 (216)
Q Consensus       190 ~~~~~Y~~ska~~~~l~~~~~~  211 (216)
                      .+...|+.+|.+.+.++..+..
T Consensus       135 ~~~~~Y~~~K~~~e~~~~~~~~  156 (307)
T d1eq2a_         135 KPLNVYGYSKFLFDEYVRQILP  156 (307)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGG
T ss_pred             ccccccccccchhhhhcccccc
Confidence            7788999999999988877643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.04  E-value=8.2e-10  Score=83.71  Aligned_cols=130  Identities=15%  Similarity=0.082  Sum_probs=87.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|++|||||+|.||.+++++|+++|+  +|+...|+....            ..+   +..+..|..++.+      ...
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~---~~~~~~d~~~~~~------~~~   60 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPR---LDNPVGPLAELLP------QLD   60 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTT---EECCBSCHHHHGG------GCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------ccc---ccccccchhhhhh------ccc
Confidence            48999999999999999999999997  566666653220            122   3345555443321      233


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCcccccccCCccCCCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLAYHEGIRFDKI  188 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  188 (216)
                      +.+|.+|+++|....    .........++|+.++..+++.+...         +-.+++++||..+..           
T Consensus        61 ~~~d~vi~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~~i~~Ss~~~~~-----------  116 (212)
T d2a35a1          61 GSIDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADA-----------  116 (212)
T ss_dssp             SCCSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCT-----------
T ss_pred             cchheeeeeeeeecc----ccccccccccchhhhhhhcccccccc---------ccccccccccccccc-----------
Confidence            578999999987421    11123467888999998888876443         345899999865432           


Q ss_pred             CCCCccchHHHHHHHHHH
Q 027991          189 NDPSGSFQSSALLLLLLL  206 (216)
Q Consensus       189 ~~~~~~Y~~ska~~~~l~  206 (216)
                       .+...|..+|...+...
T Consensus       117 -~~~~~y~~~K~~~E~~l  133 (212)
T d2a35a1         117 -KSSIFYNRVKGELEQAL  133 (212)
T ss_dssp             -TCSSHHHHHHHHHHHHH
T ss_pred             -ccccchhHHHHHHhhhc
Confidence             22347999998877554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.01  E-value=9.9e-09  Score=83.30  Aligned_cols=79  Identities=22%  Similarity=0.170  Sum_probs=59.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHH-HHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASV-RNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~-~~~~~~~~~~~  108 (216)
                      +.|+++||||+|.||.+++++|+++|++|+++.|+..+...  ..+. .  ...+..+++|++|..++ +.++       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~--~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-A--IPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-T--STTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-c--cCCCEEEEeeCCCcHHHHHHHh-------
Confidence            46899999999999999999999999999999998766432  2222 1  35688999999986653 3333       


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      ...|.++.+...
T Consensus        70 ~~~~~~~~~~~~   81 (350)
T d1xgka_          70 EGAHLAFINTTS   81 (350)
T ss_dssp             TTCSEEEECCCS
T ss_pred             cCCceEEeeccc
Confidence            367887776543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.94  E-value=5.8e-09  Score=81.98  Aligned_cols=84  Identities=18%  Similarity=0.226  Sum_probs=64.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH--HHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +.|++|||||+|.||.++++.|+++|++|++++|+......  ....+... ....+.++.+|+.+.....+.++     
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh-ccCCcEEEEeecccchhhhhhhh-----
Confidence            35789999999999999999999999999999997654321  12222221 14567889999999998877765     


Q ss_pred             cCCccEEEECCccC
Q 027991          108 HHQLNILINNAGIM  121 (216)
Q Consensus       108 ~~~id~li~~Ag~~  121 (216)
                        ..|.+|++++..
T Consensus        76 --~~~~vi~~~~~~   87 (307)
T d1qyca_          76 --NVDVVISTVGSL   87 (307)
T ss_dssp             --TCSEEEECCCGG
T ss_pred             --hceeeeeccccc
Confidence              578999988763

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.40  E-value=2.5e-07  Score=67.99  Aligned_cols=47  Identities=21%  Similarity=0.244  Sum_probs=42.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI   79 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~   79 (216)
                      ++.|+||+|+||.++|+.|+++|++|++.+|++++++...+++....
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            46788999999999999999999999999999999999888887664

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.25  E-value=3.9e-06  Score=61.99  Aligned_cols=87  Identities=16%  Similarity=0.157  Sum_probs=57.5

Q ss_pred             CCEEE-EeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH-hhc
Q 027991           31 GLTAI-VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN-IQH  108 (216)
Q Consensus        31 ~k~~l-ItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-~~~  108 (216)
                      |..++ ++||+|++|...++..-..|++||.+.++.++.++..+.+++.  +.... +..|-.+..+..+.+.++. ...
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l--Gad~v-i~~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQV-ITEDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSEE-EEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc--cccEE-EeccccchhHHHHHHHHHHhhcc
Confidence            44445 5799999999999999999999999999888877777666655  33222 2222111122333334433 234


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|+++.+.|-
T Consensus       106 ~~vdvv~D~vg~  117 (189)
T d1gu7a2         106 GEAKLALNCVGG  117 (189)
T ss_dssp             CCEEEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            579999998773

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.23  E-value=5.4e-06  Score=60.89  Aligned_cols=84  Identities=19%  Similarity=0.214  Sum_probs=64.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHH---HHHHhhcCCCeEEEEEccCCCHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVK---ETIVKEIPSAKVDAMELDLSSLASVRNFA  101 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (216)
                      ..++++|.|+|.|+ ||.|.+++..|...|. ++++..|+.+..+...   +.+....   .......|+.+.+.+.+..
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~   88 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT---DCVVTVTDLADQQAFAEAL   88 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS---SCEEEEEETTCHHHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc---CcceEeeecccccchhhhh
Confidence            35688999999998 8999999999999998 7889999887665543   3344332   3445678999988877665


Q ss_pred             HHHHhhcCCccEEEECCcc
Q 027991          102 SEYNIQHHQLNILINNAGI  120 (216)
Q Consensus       102 ~~~~~~~~~id~li~~Ag~  120 (216)
                      .       ..|++||+..+
T Consensus        89 ~-------~~diiIN~Tp~  100 (182)
T d1vi2a1          89 A-------SADILTNGTKV  100 (182)
T ss_dssp             H-------TCSEEEECSST
T ss_pred             c-------ccceeccccCC
Confidence            4       57999999765

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.10  E-value=4.7e-06  Score=61.11  Aligned_cols=80  Identities=15%  Similarity=0.198  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|.++||+||+|++|...++.....|++|+.+.+++++.+..    +..  +....+   |-.+++..++..+..  ...
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~----~~~--Ga~~vi---~~~~~~~~~~~~~~~--~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQI--GFDAAF---NYKTVNSLEEALKKA--SPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHT--TCSEEE---ETTSCSCHHHHHHHH--CTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH----Hhh--hhhhhc---ccccccHHHHHHHHh--hcC
Confidence            578999999999999999999999999999999887654332    222  333322   333333333333322  234


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|+++++.|-
T Consensus        98 Gvd~v~D~vG~  108 (182)
T d1v3va2          98 GYDCYFDNVGG  108 (182)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCceeEEecCc
Confidence            79999999984

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.09  E-value=5.4e-06  Score=60.63  Aligned_cols=105  Identities=19%  Similarity=0.212  Sum_probs=67.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|.++||+||+||.|...++.....|++|+.+.+++++.+...+ +     +....+   |-++  ...+....  -..+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l-----Ga~~vi---~~~~--~~~~~~~~--~~~~   97 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L-----GAKEVL---ARED--VMAERIRP--LDKQ   97 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T-----TCSEEE---ECC-------------CCSC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c-----ccceee---ecch--hHHHHHHH--hhcc
Confidence            47889999999999999999999999999999999887654332 2     333322   2222  11222221  1235


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCccccc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEGHRLA  178 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  178 (216)
                      ++|++|.+.|-.      .                  ....+..++       ++|+++.++...+...
T Consensus        98 gvD~vid~vgg~------~------------------~~~~l~~l~-------~~Griv~~G~~~g~~~  135 (176)
T d1xa0a2          98 RWAAAVDPVGGR------T------------------LATVLSRMR-------YGGAVAVSGLTGGAEV  135 (176)
T ss_dssp             CEEEEEECSTTT------T------------------HHHHHHTEE-------EEEEEEECSCCSSSCC
T ss_pred             CcCEEEEcCCch------h------------------HHHHHHHhC-------CCceEEEeecccCccc
Confidence            899999998842      1                  122333444       4799999998766554

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=9.3e-06  Score=58.99  Aligned_cols=79  Identities=15%  Similarity=0.264  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|.++||+||+|++|...++.....|++|+.+.+++++.+.+.     ++ +... +  .|.++++-.+++.+...  ..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-----~~-Ga~~-v--i~~~~~~~~~~i~~~t~--~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-----QN-GAHE-V--FNHREVNYIDKIKKYVG--EK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HT-TCSE-E--EETTSTTHHHHHHHHHC--TT
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-----cc-Cccc-c--cccccccHHHHhhhhhc--cC
Confidence            5789999999999999999999999999999998765543332     23 2222 1  36666543333333221  23


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6999999877

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.03  E-value=5e-05  Score=54.61  Aligned_cols=82  Identities=21%  Similarity=0.186  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc-
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH-  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-  108 (216)
                      .|.+++|+| +|++|...++.+...|++|+++++++++.+.+.+     . +....+ ..|-.+ ++..+..+++.+.. 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-----~-ga~~~~-~~~~~~-~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-----C-GADVTL-VVDPAK-EEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----T-TCSEEE-ECCTTT-SCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-----c-CCcEEE-eccccc-cccchhhhhhhcccc
Confidence            467899997 6899999999999999999999999877554332     2 222222 222221 12233334444433 


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            478999999985

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.02  E-value=9.2e-06  Score=58.64  Aligned_cols=75  Identities=16%  Similarity=0.287  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .+|.++|.|+ |.+|..+|+.|+++|++|++++|+.+++++..+    .+  ........+..+.......+.       
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~----~~--~~~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GV--QHSTPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT----TC--TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh----cc--cccccccccccchhhhHhhhh-------
Confidence            3689999987 999999999999999999999999887665443    32  234445566666666655543       


Q ss_pred             CccEEEECC
Q 027991          110 QLNILINNA  118 (216)
Q Consensus       110 ~id~li~~A  118 (216)
                      ..|.++...
T Consensus        67 ~~~~~i~~~   75 (182)
T d1e5qa1          67 KHDLVISLI   75 (182)
T ss_dssp             TSSEEEECS
T ss_pred             ccceeEeec
Confidence            456666544

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.99  E-value=2.3e-05  Score=56.16  Aligned_cols=84  Identities=17%  Similarity=0.307  Sum_probs=59.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++.++|.|+ |++|..+++.|...|. ++.++.|+.+++++...++     +..  +.  +   .+++.+.+.    
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~--~~--~---~~~~~~~l~----   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--AV--R---FDELVDHLA----   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--EC--C---GGGHHHHHH----
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hcc--cc--c---chhHHHHhc----
Confidence            678999999998 9999999999999998 6889999987776665544     211  11  2   233443333    


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHH
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIE  133 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~  133 (216)
                         ..|++|++.+...+..  +.+.+.
T Consensus        84 ---~~Divi~atss~~~ii--~~~~i~  105 (159)
T d1gpja2          84 ---RSDVVVSATAAPHPVI--HVDDVR  105 (159)
T ss_dssp             ---TCSEEEECCSSSSCCB--CHHHHH
T ss_pred             ---cCCEEEEecCCCCccc--cHhhhH
Confidence               6799999998755443  444433

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=1.5e-05  Score=57.87  Aligned_cols=80  Identities=11%  Similarity=0.148  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|++++|+||+|++|...++.....|++|+++++++++.+... ++     +... +  .|-++++-.++ +.++- ...
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~~-v--i~~~~~d~~~~-v~~~t-~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAWQ-V--INYREEDLVER-LKEIT-GGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSE-E--EETTTSCHHHH-HHHHT-TTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCeE-E--EECCCCCHHHH-HHHHh-CCC
Confidence            4789999999999999999999999999999999987755433 22     3322 2  36565443333 33332 234


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|+++.+.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            78999999875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=0.00018  Score=51.70  Aligned_cols=81  Identities=21%  Similarity=0.188  Sum_probs=55.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.+. ++     +.. .++..+-.+..+..+.++.-  ..
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~-~~~~~~~~~~~~~~~~~~~~--~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LVLQISKESPQEIARKVEGQ--LG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EEEECSSCCHHHHHHHHHHH--HT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCc-cccccccccccccccccccc--CC
Confidence            4678999986 9999999999999998 7999999987765432 22     222 23333444555544444432  12


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence            478999999985

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.83  E-value=1.2e-05  Score=58.70  Aligned_cols=79  Identities=14%  Similarity=0.239  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|.++||+||+|++|...++.+...|++|+++.++.++.+    .+++ . +....   .|-.+++ +.+.+.+.. ...
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~-~-Ga~~v---i~~~~~~-~~~~v~~~t-~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSR-L-GVEYV---GDSRSVD-FADEILELT-DGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHT-T-CCSEE---EETTCST-HHHHHHHHT-TTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccc-c-ccccc---ccCCccC-HHHHHHHHh-CCC
Confidence            4689999999999999999999999999999998865543    2332 2 33322   2444433 322232222 124


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            7999999988

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.81  E-value=7.7e-05  Score=54.28  Aligned_cols=82  Identities=17%  Similarity=0.202  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +... ++...=.+..+..+.+.+... .
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~-vi~~~~~~~~~~~~~i~~~~~-~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GADL-TLNRRETSVEERRKAIMDITH-G   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCSE-EEETTTSCHHHHHHHHHHHTT-T
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cceE-EEeccccchHHHHHHHHHhhC-C
Confidence            5789999987 8999999999999998 799999998776433 222     3322 222221233333333333322 2


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            369999999986

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.81  E-value=2.3e-05  Score=54.18  Aligned_cols=72  Identities=18%  Similarity=0.247  Sum_probs=55.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      +++|.|+ |.+|..+++.|.++|++|++++++++..+...+    +.   ...++..|.++++.++++-      ....|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~----~~---~~~vi~Gd~~~~~~l~~~~------i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI---DALVINGDCTKIKTLEDAG------IEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC---SSEEEESCTTSHHHHHHTT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhh----hh---hhhhccCcccchhhhhhcC------hhhhh
Confidence            5889998 999999999999999999999999877665433    22   3567889999999877641      12567


Q ss_pred             EEEECC
Q 027991          113 ILINNA  118 (216)
Q Consensus       113 ~li~~A  118 (216)
                      .++...
T Consensus        68 ~vv~~t   73 (132)
T d1lssa_          68 MYIAVT   73 (132)
T ss_dssp             EEEECC
T ss_pred             hhcccC
Confidence            777653

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=2.7e-05  Score=48.75  Aligned_cols=42  Identities=24%  Similarity=0.306  Sum_probs=37.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      ++.++||+||+||.|...++.+...|++|+.+.+++++.+..
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            567899999999999999999999999999999998775543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.74  E-value=5.3e-05  Score=54.76  Aligned_cols=74  Identities=15%  Similarity=0.202  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|++++|+||+|++|...++.....|++|+.+++++++.+...+ +     +....   .|..+.  .    +++. ...
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-l-----Ga~~~---i~~~~~--~----~~~~-~~~   90 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L-----GAEEA---ATYAEV--P----ERAK-AWG   90 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T-----TCSEE---EEGGGH--H----HHHH-HTT
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-c-----cccee---eehhhh--h----hhhh-ccc
Confidence            57899999999999999999999999999999998777654432 2     32221   133321  1    2222 235


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|++|.+.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            7999999776

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=8.2e-05  Score=53.68  Aligned_cols=77  Identities=17%  Similarity=0.319  Sum_probs=56.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...++||.++|.|+ ||-+++++-.|.+.|.+|.++.|+.++.++..+.+....   .+..+  +..+.           
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~~--~~~~~-----------   75 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQAL--SMDEL-----------   75 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEEC--CSGGG-----------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---ccccc--ccccc-----------
Confidence            35678999999998 999999999999999999999999988887776665432   22222  22211           


Q ss_pred             hhcCCccEEEECCcc
Q 027991          106 IQHHQLNILINNAGI  120 (216)
Q Consensus       106 ~~~~~id~li~~Ag~  120 (216)
                       .....|++||+...
T Consensus        76 -~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 -EGHEFDLIINATSS   89 (170)
T ss_dssp             -TTCCCSEEEECCSC
T ss_pred             -cccccceeeccccc
Confidence             11367999998654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.62  E-value=0.00068  Score=47.59  Aligned_cols=118  Identities=15%  Similarity=0.170  Sum_probs=73.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..++++.|+|+ |.+|..++..++.+|.  +|++.|+++++++-...++.....  .........|.   ++        
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~--------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD--------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG--------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH--------
Confidence            35678999997 9999999999999884  799999998876666666654321  22333333332   22        


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                         ...-|++|.++|......+.-.+    .+..|+    -+.+...+.+.+.    .+.+.++++|.-
T Consensus        72 ---l~daDvvvitag~~~~~~~~R~d----l~~~N~----~i~~~i~~~i~~~----~p~a~~ivvtNP  125 (148)
T d1ldna1          72 ---CRDADLVVICAGANQKPGETRLD----LVDKNI----AIFRSIVESVMAS----GFQGLFLVATNP  125 (148)
T ss_dssp             ---TTTCSEEEECCSCCCCTTTCSGG----GHHHHH----HHHHHHHHHHHHH----TCCSEEEECSSS
T ss_pred             ---hccceeEEEecccccccCcchhH----HHHHHH----HHHHHHHHHHHhh----CCCceEEEecCc
Confidence               22579999999986433322222    233343    3445555555443    146778877753

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.61  E-value=0.00026  Score=50.23  Aligned_cols=125  Identities=16%  Similarity=0.072  Sum_probs=71.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      -+.+++.|+|+ |.+|..++..+..++. ++++.|.+++.++.....+.....  +.......  -++.+   +.+    
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~---~~~----   74 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYE---AAL----   74 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHH---HHH----
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCchh---hhh----
Confidence            34567888897 9999999999988884 899999998776655555543211  11111111  11221   111    


Q ss_pred             hhcCCccEEEECCccCCCCCCCChH-HHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          106 IQHHQLNILINNAGIMGTPFMLSKD-NIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~~~~~~~~~~-~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                         ..-|++|.++|....+.+.+.+ .=.+.+..|..    +++...+.+.+.    .+.+.++++|.-.
T Consensus        75 ---~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~----iv~~i~~~i~~~----~p~aiviivsNPv  133 (154)
T d1pzga1          75 ---TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKY----CPKTFIIVVTNPL  133 (154)
T ss_dssp             ---TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHH----CTTCEEEECCSSH
T ss_pred             ---cCCCeEEEecccccCCCCCCcccchhhhhhhhHH----HHHHHHHHHHhc----CCCcEEEEeCCcH
Confidence               2679999999986433321111 11223444444    444455544443    2466777777543

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.00023  Score=53.65  Aligned_cols=78  Identities=21%  Similarity=0.253  Sum_probs=54.5

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccC
Q 027991           28 DGSGLTAIVTGA----------------TSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDL   91 (216)
Q Consensus        28 ~~~~k~~lItG~----------------s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   91 (216)
                      +++|+++|||+|                ||-.|.+||+.+..+|++|.++.-.....          . ...+..+  .+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----------~-p~~~~~~--~~   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------T-PPFVKRV--DV   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------C-CTTEEEE--EC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----------c-ccccccc--ee
Confidence            688999999987                57899999999999999999886543310          1 2233333  44


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEECCccC
Q 027991           92 SSLASVRNFASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~  121 (216)
                      ...++..+.+.+   .....|++|++|++.
T Consensus        70 ~t~~~m~~~~~~---~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          70 MTALEMEAAVNA---SVQQQNIFIGCAAVA   96 (223)
T ss_dssp             CSHHHHHHHHHH---HGGGCSEEEECCBCC
T ss_pred             hhhHHHHHHHHh---hhccceeEeeeechh
Confidence            555555444443   334679999999975

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.53  E-value=0.00014  Score=51.23  Aligned_cols=119  Identities=14%  Similarity=0.128  Sum_probs=71.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      |++.|+|+ |.+|..++-.++.+|  .++++.|.++++++.....+....+  .........|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            67788895 999999999999998  3899999998876655555554321  2223333323   3222          


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                       ..-|++|.+||...+..+...++=.+.+..|.    -+.+...+.+.+.    .+.+-++++|.-
T Consensus        68 -~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~----~p~aivivvtNP  124 (146)
T d1hyha1          68 -ADADVVISTLGNIKLQQDNPTGDRFAELKFTS----SMVQSVGTNLKES----GFHGVLVVISNP  124 (146)
T ss_dssp             -TTCSEEEECCSCGGGTC-------CTTHHHHH----HHHHHHHHHHHHT----TCCSEEEECSSS
T ss_pred             -ccccEEEEeccccccccccCCccHHHHHHHHH----HHHHHHHHHHhhc----CCCeEEEEecCc
Confidence             25799999999753222111111112344443    4556666666543    246777777753

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.52  E-value=0.00082  Score=47.07  Aligned_cols=116  Identities=12%  Similarity=0.126  Sum_probs=68.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +++++.|.|+ |.+|..+|..|+.+|  .+|++.|+++++++-....+..... .........|.   ++          
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----------   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----------   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----------
Confidence            3568888996 999999999999998  4899999998776555555543211 12223333332   22          


Q ss_pred             hcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          107 QHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       107 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                       ...-|++|.+||......    +.-.+.+..|+    .+.+...+.+.+.    .+++.++++|.
T Consensus        70 -~~~adivvitag~~~~~g----~~r~~l~~~N~----~i~~~~~~~i~~~----~p~aivivvtN  122 (146)
T d1ez4a1          70 -CKDADLVVITAGAPQKPG----ESRLDLVNKNL----NILSSIVKPVVDS----GFDGIFLVAAN  122 (146)
T ss_dssp             -GTTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHT----TCCSEEEECSS
T ss_pred             -hccccEEEEecccccCCC----CCHHHHHHHHH----HHHHHHHHHHhhc----CCCcEEEEeCC
Confidence             236799999999753221    11223344554    3445555555543    25667777664

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=0.00054  Score=48.73  Aligned_cols=124  Identities=14%  Similarity=0.116  Sum_probs=76.6

Q ss_pred             cCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHH
Q 027991           23 VTDGIDGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVR   98 (216)
Q Consensus        23 ~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~   98 (216)
                      +.+...++..++.|+|+ |.+|..+|..++.+|.  ++++.|++++.++-....+.....  +........|.   +++ 
T Consensus        11 ~~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~~-   85 (159)
T d2ldxa1          11 LVPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NVS-   85 (159)
T ss_dssp             CSSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GGG-
T ss_pred             hcccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hhh-
Confidence            34555677778889996 9999999999999984  799999998776655556654321  11222222232   221 


Q ss_pred             HHHHHHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991           99 NFASEYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus        99 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                                ..-|++|..||......+ +..+   .++.|    ..+.+...+.+.+.    .+.+.++++|.-
T Consensus        86 ----------~~adivvitag~~~~~~~-~R~d---ll~~N----~~i~~~i~~~i~~~----~p~~ivivvtNP  138 (159)
T d2ldxa1          86 ----------ANSKLVIITAGARMVSGQ-TRLD---LLQRN----VAIMKAIVPGVIQN----SPDCKIIVVTNP  138 (159)
T ss_dssp             ----------TTEEEEEECCSCCCCTTT-CSSC---TTHHH----HHHHHHHTTTHHHH----STTCEEEECSSS
T ss_pred             ----------ccccEEEEecccccCCCC-CHHH---HHHHH----HHHHHHHHHHHhcc----CCCeEEEEeCCc
Confidence                      367999999998643322 2111   13333    33455555655544    256778877763

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.50  E-value=0.00024  Score=51.29  Aligned_cols=78  Identities=15%  Similarity=0.206  Sum_probs=58.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ...+++|.++|.|+ ||-+.+++..|.+.+.+|+++.|+.++++...+.+...   ..+..+..|-.             
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~-------------   75 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI-------------   75 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC-------------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc-------------
Confidence            35678999999987 89999999999987789999999998888888877543   23444443311             


Q ss_pred             hhcCCccEEEECCccC
Q 027991          106 IQHHQLNILINNAGIM  121 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~  121 (216)
                       .....|++||+....
T Consensus        76 -~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 -PLQTYDLVINATSAG   90 (171)
T ss_dssp             -CCSCCSEEEECCCC-
T ss_pred             -cccccceeeeccccc
Confidence             124689999997653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.48  E-value=0.0029  Score=44.01  Aligned_cols=117  Identities=17%  Similarity=0.177  Sum_probs=67.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++.|+||+|.+|..++..++.+|.  ++++.|.++.+.+  ...+...  .. ......-+ ...+..+.+       ..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~--~~-~~~~~~~~-~~~~~~~~~-------~~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHI--ET-RATVKGYL-GPEQLPDCL-------KG   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTS--SS-SCEEEEEE-SGGGHHHHH-------TT
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhh--hh-hcCCCeEE-cCCChHHHh-------CC
Confidence            688999999999999999999984  6999998754322  2233211  11 11111111 122222222       26


Q ss_pred             ccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          111 LNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       111 id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      -|++|.+||......+ +..+   .+..|+.-.    +.+.+.+.+.    .+.+.|+++|.-.
T Consensus        69 aDivVitag~~~~~g~-sR~~---ll~~N~~i~----~~i~~~i~~~----~p~~iiivvtNPv  120 (144)
T d1mlda1          69 CDVVVIPAGVPRKPGM-TRDD---LFNTNATIV----ATLTAACAQH----CPDAMICIISNPV  120 (144)
T ss_dssp             CSEEEECCSCCCCTTC-CGGG---GHHHHHHHH----HHHHHHHHHH----CTTSEEEECSSCH
T ss_pred             CCEEEECCCcCCCCCC-Ccch---HHHHHHHHH----HHHHHHHHhc----CCCeEEEEecCch
Confidence            7999999998543322 3222   355555444    4445554443    1467777777643

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=0.0001  Score=53.90  Aligned_cols=78  Identities=17%  Similarity=0.187  Sum_probs=50.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEE-EEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVM-GVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +++|||+||+||+|...++..-..|+++++ +..+.++.....    .+. +...   ..|.++++ ..+.++++.  ..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~----~~~-gad~---vi~~~~~~-~~~~~~~~~--~~   99 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLT----SEL-GFDA---AVNYKTGN-VAEQLREAC--PG   99 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHH----HHS-CCSE---EEETTSSC-HHHHHHHHC--TT
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhh----hcc-cceE---Eeeccchh-HHHHHHHHh--cc
Confidence            478999999999999999999999986544 555544433333    232 2221   23555433 333344433  24


Q ss_pred             CccEEEECCc
Q 027991          110 QLNILINNAG  119 (216)
Q Consensus       110 ~id~li~~Ag  119 (216)
                      ++|+++.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            7999999987

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.42  E-value=0.0003  Score=50.29  Aligned_cols=80  Identities=15%  Similarity=0.134  Sum_probs=54.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+.+++|+|++|++|...++.+...|. +|+++++++++.+.+.+ +     +... ++  |.++++..++..+..  ..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~-----Ga~~-~i--~~~~~~~~~~~~~~~--~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-----GADY-VI--NASMQDPLAEIRRIT--ES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-----TCSE-EE--ETTTSCHHHHHHHHT--TT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c-----CCce-ee--ccCCcCHHHHHHHHh--hc
Confidence            467899999999999999999999995 89999988766544322 2     3322 22  344443344333322  22


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            469999999885

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.42  E-value=8.1e-05  Score=51.28  Aligned_cols=72  Identities=13%  Similarity=0.077  Sum_probs=53.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHH-HHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNF-ASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~-~~~~~~~~~~  110 (216)
                      |.++|.|+ |-+|..+++.|.++|++|++++.+++..+..    ..    .....+.+|.++++.++++ ++       .
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~----~~~~~~~gd~~~~~~l~~a~i~-------~   64 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----AS----YATHAVIANATEENELLSLGIR-------N   64 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TT----TCSEEEECCTTCTTHHHHHTGG-------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HH----hCCcceeeecccchhhhccCCc-------c
Confidence            45677776 8999999999999999999999997765543    22    2235677899998877654 22       4


Q ss_pred             ccEEEECCc
Q 027991          111 LNILINNAG  119 (216)
Q Consensus       111 id~li~~Ag  119 (216)
                      .|.+|...+
T Consensus        65 a~~vi~~~~   73 (134)
T d2hmva1          65 FEYVIVAIG   73 (134)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEEEcC
Confidence            677776655

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.41  E-value=0.00087  Score=47.29  Aligned_cols=118  Identities=11%  Similarity=0.044  Sum_probs=63.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---------eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV---------HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~---------~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .++.|+||+|.+|..++..|+..+.         +++..+++.++++....++.... ......+...-.+.+.      
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------   77 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDPKVA------   77 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCHHHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCchhhh------
Confidence            3799999999999999999998753         12222334444444433333322 2223333332222222      


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                           ....|++|.++|...... .+.+   +.+..|+.    .++...+.+.+..   .+.+.|+.+|.
T Consensus        78 -----~~~advViitaG~~~~pg-~~r~---dl~~~N~~----i~~~~~~~i~k~a---~~~~~vivvsN  131 (154)
T d1y7ta1          78 -----FKDADYALLVGAAPRKAG-MERR---DLLQVNGK----IFTEQGRALAEVA---KKDVKVLVVGN  131 (154)
T ss_dssp             -----TTTCSEEEECCCCCCCTT-CCHH---HHHHHHHH----HHHHHHHHHHHHS---CTTCEEEECSS
T ss_pred             -----cccccEEEeecCcCCCCC-CcHH---HHHHHHHH----HHHHHHHHHHHhC---CCCcEEEEecC
Confidence                 236899999999853222 2333   33444543    4555555555421   12355666664

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.34  E-value=0.001  Score=47.38  Aligned_cols=77  Identities=13%  Similarity=0.145  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+.+. ++     +.... +  |-.++.+..      ....+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l-----Ga~~~-i--~~~~~~~~~------~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADHY-I--ATLEEGDWG------EKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSEE-E--EGGGTSCHH------HHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc-----CCcEE-e--eccchHHHH------Hhhhc
Confidence            5788999987 89999999988899999999999988766543 22     33322 2  222211111      12335


Q ss_pred             CccEEEECCccCC
Q 027991          110 QLNILINNAGIMG  122 (216)
Q Consensus       110 ~id~li~~Ag~~~  122 (216)
                      .+|++|.+.|...
T Consensus        91 ~~d~vi~~~~~~~  103 (168)
T d1piwa2          91 TFDLIVVCASSLT  103 (168)
T ss_dssp             CEEEEEECCSCST
T ss_pred             ccceEEEEecCCc
Confidence            7899999887643

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.34  E-value=0.0036  Score=44.35  Aligned_cols=119  Identities=13%  Similarity=0.041  Sum_probs=74.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASE  103 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~  103 (216)
                      .+.++++.|+|+ |.+|..++..++.+|.  ++++.|++++.++-....+.....  .........|   .+++      
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~~~------   86 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YSVT------   86 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GGGG------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hhhc------
Confidence            345678888896 9999999999999995  799999998776655555543211  1222222222   2222      


Q ss_pred             HHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          104 YNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       104 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                           ..-|++|..||...... .+..   +.+..|    ..+.+...+.+.+.    .+++-++++|.-
T Consensus        87 -----~~adiVVitAg~~~~~g-~tR~---~l~~~N----~~i~~~i~~~i~~~----~p~aiiivvtNP  139 (160)
T d1i0za1          87 -----ANSKIVVVTAGVRQQEG-ESRL---NLVQRN----VNVFKFIIPQIVKY----SPDCIIIVVSNP  139 (160)
T ss_dssp             -----TTCSEEEECCSCCCCTT-CCGG---GGHHHH----HHHHHHHHHHHHHH----CTTCEEEECSSS
T ss_pred             -----ccccEEEEecCCccccC-cchH---HHHHHH----HHHHHHHHHHHHhc----CCCcEEEEeCCc
Confidence                 25799999999864332 2222   223334    34666666666654    256777777753

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.32  E-value=0.0044  Score=43.10  Aligned_cols=114  Identities=17%  Similarity=0.217  Sum_probs=66.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCc--chHHHHHHHHhhcC----CCeEEEEEccCCCHHHHHHHHHHH
Q 027991           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIA--AGKDVKETIVKEIP----SAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~--~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++.|+||+|.+|..++..++.+|  .++++.+++++  +++-....+.....    ..++.+...+  +.+.        
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~~--------   71 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLRI--------   71 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGGG--------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHHH--------
Confidence            58899999999999999999999  38999998853  23333344443211    2233333221  2222        


Q ss_pred             HhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          105 NIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                         ...-|++|.+||...... .+.   .+.+..|..    +.+...+.+.+.     ....|+.+|.
T Consensus        72 ---l~~aDvVVitAG~~~~~g-~sR---~dl~~~Na~----iv~~i~~~i~~~-----~~~~iivVtN  123 (145)
T d1hyea1          72 ---IDESDVVIITSGVPRKEG-MSR---MDLAKTNAK----IVGKYAKKIAEI-----CDTKIFVITN  123 (145)
T ss_dssp             ---GTTCSEEEECCSCCCCTT-CCH---HHHHHHHHH----HHHHHHHHHHHH-----CCCEEEECSS
T ss_pred             ---hccceEEEEecccccCCC-CCh---hhhhhhhHH----HHHHHHHHHhcc-----CCCeEEEEcC
Confidence               136799999999853222 232   234555654    445555555443     1234555653

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.32  E-value=0.00026  Score=47.36  Aligned_cols=63  Identities=10%  Similarity=0.113  Sum_probs=45.2

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC
Q 027991           24 TDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        24 ~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      +-.++++||+++|+|| |.+|..-++.|++.|++|++++.....  +... +..   ..++.+..-++.+
T Consensus         5 Pi~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~--~~~~-~~~---~~~i~~~~~~~~~   67 (113)
T d1pjqa1           5 PIFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIP--QFTV-WAN---EGMLTLVEGPFDE   67 (113)
T ss_dssp             EEEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCH--HHHH-HHT---TTSCEEEESSCCG
T ss_pred             ceEEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCCh--HHHH-HHh---cCCceeeccCCCH
Confidence            3456899999999999 789999999999999999998765432  2221 221   3456666655543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.29  E-value=0.00066  Score=48.45  Aligned_cols=74  Identities=16%  Similarity=0.245  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+++|.|+ |++|...++.+...|+++++++++.++.+. ..++     +....   .|..+++...       ...+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l-----Gad~~---i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL-----GADEV---VNSRNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH-----TCSEE---EETTCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc-----CCcEE---EECchhhHHH-------HhcC
Confidence            4788999986 999999999999999999999988876543 3333     33221   3555554332       2235


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      ++|++|.++|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999985

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.28  E-value=0.00015  Score=52.18  Aligned_cols=42  Identities=31%  Similarity=0.409  Sum_probs=37.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      ++.+|||+||+||+|...++.....|++|+.+.++.++.+..
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            456799999999999999999999999999999998876554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.27  E-value=0.0015  Score=45.45  Aligned_cols=115  Identities=17%  Similarity=0.132  Sum_probs=66.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcCCC-eEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIPSA-KVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +++.|+|+ |.+|..++-.++.+|.  ++++.|++++.++-...++....+.. .......   +.+           ..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------Hh
Confidence            45667787 9999999999999984  79999999887766555665432211 2222111   222           12


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      ..-|++|..||...... .+   -.+.+..|+    .+.+...+.+.+.    .+++-++++|.-
T Consensus        67 ~~adivvitag~~~~~~-~~---r~~l~~~N~----~i~~~i~~~i~~~----~p~ai~ivvtNP  119 (142)
T d1y6ja1          67 KDCDVIVVTAGANRKPG-ET---RLDLAKKNV----MIAKEVTQNIMKY----YNHGVILVVSNP  119 (142)
T ss_dssp             TTCSEEEECCCC-------C---HHHHHHHHH----HHHHHHHHHHHHH----CCSCEEEECSSS
T ss_pred             CCCceEEEecccccCcC-cc---hhHHhhHHH----HHHHHHHHHhhcc----CCCceEEEecCh
Confidence            36799999999753222 12   234455554    4555555555543    146677777753

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.23  E-value=0.0028  Score=43.88  Aligned_cols=114  Identities=16%  Similarity=0.217  Sum_probs=70.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++.|+|+ |.+|..++..++.++  .++++.|.++++++-....+....+ .........   +.+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHHh-----------c
Confidence            4677786 899999999999888  4899999998777655555554322 122233332   22222           2


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      .-|++|.+||......+ +.   .+.+..|+    .+.+...+.+.+.    .+.+.++++|.-
T Consensus        67 ~adivvitag~~~~~g~-~r---~dl~~~N~----~I~~~i~~~i~~~----~p~aivivvtNP  118 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPGE-TR---LQLLGRNA----RVMKEIARNVSKY----APDSIVIVVTNP  118 (140)
T ss_dssp             TCSEEEECCCCCCCSSC-CH---HHHHHHHH----HHHHHHHHHHHHH----CTTCEEEECSSS
T ss_pred             CCCEEEEecccccCCCc-ch---hhhhcccc----chHHHHHHHHHhc----CCCcEEEEeCCc
Confidence            67999999998543322 22   23344453    3555556665553    246777777753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00022  Score=51.80  Aligned_cols=42  Identities=24%  Similarity=0.306  Sum_probs=37.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      ++..+||+||+||+|...++..-..|++|+.+.++.++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            345899999999999999999999999999999998875543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.22  E-value=0.00056  Score=49.18  Aligned_cols=80  Identities=16%  Similarity=0.146  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+...+     . +....+...|  .++.+.+..++..  .
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-----~-Ga~~~i~~~~--~~~~~~~~~~~~~--~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-----V-GATECVNPQD--YKKPIQEVLTEMS--N   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----T-TCSEEECGGG--CSSCHHHHHHHHT--T
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-----h-CCeeEEecCC--chhHHHHHHHHHh--c
Confidence            4679999999 7899999999999996 89999999887654432     2 2222211112  2233444444432  2


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            589999999986

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.22  E-value=0.00024  Score=51.36  Aligned_cols=79  Identities=15%  Similarity=0.101  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +... +  .|..+++.. +.+.++.+ .
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~~-~--i~~~~~~~~-~~v~~~t~-g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GATD-I--LNYKNGHIE-DQVMKLTN-G   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCSE-E--ECGGGSCHH-HHHHHHTT-T
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Cccc-c--ccccchhHH-HHHHHHhh-c
Confidence            4678999976 9999999999999998 7999999877654432 23     3222 1  344443322 33333322 2


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            369999999995

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.19  E-value=0.0041  Score=44.67  Aligned_cols=118  Identities=10%  Similarity=-0.010  Sum_probs=62.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC---C----eEEEEEcCC--cchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRG---V----HVVMGVRDI--AAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g---~----~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .++.||||+|.||..++..|++..   .    .+.+.+...  +.++...-++........-..+..  ++..   +   
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~---~---   96 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY---E---   96 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH---H---
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch---h---
Confidence            379999999999999999998743   1    344445443  223333333333221111111211  1211   1   


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                          .+...|++|..+|....+. ++.   .+.+..|+.    +++...+.+.+-.   .+...|+.+|.
T Consensus        97 ----~~~~aDvVvi~ag~~rkpg-~tR---~Dll~~N~~----I~k~~~~~i~~~a---~~~~~vlvv~N  151 (175)
T d7mdha1          97 ----VFEDVDWALLIGAKPRGPG-MER---AALLDINGQ----IFADQGKALNAVA---SKNVKVLVVGN  151 (175)
T ss_dssp             ----HTTTCSEEEECCCCCCCTT-CCH---HHHHHHHHH----HHHHHHHHHHHHS---CTTCEEEECSS
T ss_pred             ----hccCCceEEEeeccCCCCC-CcH---HHHHHHHHH----HHHHHHHHHHhhC---CCCcEEEEecC
Confidence                1237899999999853222 233   345555643    4455555555421   02345666654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.001  Score=46.57  Aligned_cols=76  Identities=16%  Similarity=0.105  Sum_probs=58.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCcc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLN  112 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id  112 (216)
                      .++|.|. +.+|..+++.|.++|.+|++++.+++......++..    ...+.++..|.++++.++++-      ....|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~----~~~~~vi~Gd~~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh----cCCcEEEEccCcchHHHHHhc------cccCC
Confidence            5788888 799999999999999999999998876555555443    345788999999998776542      12567


Q ss_pred             EEEECCc
Q 027991          113 ILINNAG  119 (216)
Q Consensus       113 ~li~~Ag  119 (216)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            8877654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.18  E-value=0.0012  Score=46.81  Aligned_cols=84  Identities=17%  Similarity=0.101  Sum_probs=55.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHH--------hhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV--------KEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ++.|.|. |-+|.++|+.|.++|++|++.+|+.+..+.+.+.-.        +.....++.++..   ..+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            3667765 999999999999999999999999776555433210        0111233444333   356788888888


Q ss_pred             HhhcCCccEEEECCcc
Q 027991          105 NIQHHQLNILINNAGI  120 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~  120 (216)
                      .....+=.++++.++.
T Consensus        78 ~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          78 IPHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGGSCTTCEEEECCSC
T ss_pred             hhhcccccceeecccc
Confidence            7655554566665543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.12  E-value=0.0011  Score=47.67  Aligned_cols=78  Identities=12%  Similarity=0.088  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|.|+ |++|...++.+...|++ |+++++++++.+.+. ++     +.. .+  .|.++++ +.+.+.++..  
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~-----Ga~-~~--i~~~~~~-~~~~i~~~t~--   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GAT-HV--INSKTQD-PVAAIKEITD--   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCS-EE--EETTTSC-HHHHHHHHTT--
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc-----CCe-EE--EeCCCcC-HHHHHHHHcC--
Confidence            4678999987 89999999999999985 556677766544432 22     222 12  2444433 3334444322  


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.+.|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence            479999999995

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.12  E-value=0.005  Score=42.67  Aligned_cols=115  Identities=14%  Similarity=0.108  Sum_probs=69.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCC--cchHHHHHHHHhhcC-CCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDI--AAGKDVKETIVKEIP-SAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~--~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++.|+|++|.+|..+|..+..+|.  ++++.|...  +.++-....+....+ .........|   .++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-----------
Confidence            588999999999999999999984  799988543  333333334443211 2233333333   222           


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      ...-|++|.+||...... .+   =.+.+..|+    -+.+...+.+.+.    .+++.++++|.-
T Consensus        68 ~~~aDiVvitaG~~~~~g-~~---R~dl~~~N~----~I~~~i~~~i~~~----~p~~i~ivvtNP  121 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQPG-QT---RIDLAGDNA----PIMEDIQSSLDEH----NDDYISLTTSNP  121 (142)
T ss_dssp             GTTCSEEEECCCCCCCTT-CC---HHHHHHHHH----HHHHHHHHHHHTT----CSCCEEEECCSS
T ss_pred             hhhcCEEEEecccccccC-Cc---hhhHHHHHH----HHHHHHHHHHHhc----CCCceEEEecCh
Confidence            126799999999753322 22   233455554    4566666666653    246777777653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.07  E-value=0.0024  Score=44.52  Aligned_cols=82  Identities=13%  Similarity=0.056  Sum_probs=54.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ..-|++.|+||.|.+|..+++.|.++|++|.+.+|+.+...+...    .  ...+.....++   ..+...+.++....
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~--~~~~v~~~~~~---~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----A--NADVVIVSVPI---NLTLETIERLKPYL   77 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----T--TCSEEEECSCG---GGHHHHHHHHGGGC
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----h--hccccccccch---hhheeeeecccccc
Confidence            334689999999999999999999999999999998765443221    1  34444444443   34555666665544


Q ss_pred             CCccEEEECCc
Q 027991          109 HQLNILINNAG  119 (216)
Q Consensus       109 ~~id~li~~Ag  119 (216)
                      ..=.+++..++
T Consensus        78 ~~~~iiiD~~S   88 (152)
T d2pv7a2          78 TENMLLADLTS   88 (152)
T ss_dssp             CTTSEEEECCS
T ss_pred             cCCceEEEecc
Confidence            33235555554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.06  E-value=0.0017  Score=46.77  Aligned_cols=80  Identities=11%  Similarity=0.025  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|.|+ ||+|...++.+...|+ +|+++++++++++.+.+ +     +....+   |..+.+...+.+.+.. ..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~-----GA~~~i---n~~~~~~~~~~~~~~~-~g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V-----GATECI---SPKDSTKPISEVLSEM-TG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H-----TCSEEE---CGGGCSSCHHHHHHHH-HT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c-----CCcEEE---CccccchHHHHHHHHh-cc
Confidence            4778999986 9999999999999995 89999999998765443 2     333222   3332222222222221 23


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +++|++|.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            479999999985

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.01  E-value=0.001  Score=46.24  Aligned_cols=116  Identities=17%  Similarity=0.135  Sum_probs=67.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhc--CCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      |++.|+|+ |.+|..+|-.|+.++. ++++.|.+++..+.....+....  ......+..+  .|.+++           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence            57778886 9999999999998884 89999998876555444443211  0112222211  122222           


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      ..-|++|.+||......+ +   -.+.+..|+    .+.+...+.+.+.    .+.+.++++|.-
T Consensus        68 ~~advvvitag~~~~~~~-~---r~dl~~~N~----~i~~~i~~~i~k~----~p~aivivvtNP  120 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKPGM-S---REDLIKVNA----DITRACISQAAPL----SPNAVIIMVNNP  120 (142)
T ss_dssp             TTCSEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGG----CTTCEEEECSSS
T ss_pred             cCCCEEEEeeeccCCcCc-c---hhHHHhHHH----HHHHHHHHHHhcc----CCCceEEEeCCc
Confidence            256999999998532221 1   123344443    4666777776653    256777776653

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.01  E-value=0.025  Score=39.11  Aligned_cols=117  Identities=17%  Similarity=0.164  Sum_probs=67.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-C--CeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           33 TAIVTGATSGIGTETARVLALR-G--VHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~-g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ++.|+|++|.+|.+++..|..+ +  .++.+.+..+ ..+.....+........... ...-.+.++++           
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~~~-----------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDATPALE-----------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCHHHHT-----------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCccccC-----------
Confidence            5789999999999999988654 4  5899999764 44333334443211122222 12233333322           


Q ss_pred             CccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          110 QLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       110 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      .-|++|.+||......+ +..   +.+..|..    +.+...+.+.+.    .+++.|+++|.-.
T Consensus        69 ~aDvvvitaG~~~k~g~-~R~---dl~~~N~~----i~~~v~~~i~~~----~p~aivivvtNPv  121 (145)
T d2cmda1          69 GADVVLISAGVRRKPGM-DRS---DLFNVNAG----IVKNLVQQVAKT----CPKACIGIITNPV  121 (145)
T ss_dssp             TCSEEEECCSCCCCTTC-CGG---GGHHHHHH----HHHHHHHHHHHH----CTTSEEEECSSSH
T ss_pred             CCCEEEECCCccCCCCc-chh---hHHHHHHH----HHHHHHHHHHhh----CCCcEEEEccCCc
Confidence            56999999998643322 322   23455543    444555555443    1456777777643

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.00  E-value=0.0062  Score=42.20  Aligned_cols=114  Identities=13%  Similarity=0.105  Sum_probs=68.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhc--CCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .++.|+|+ |.+|..+|..++.+|.  ++++.|.++++++-....+....  .+. ......  .+.+++          
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~-~~i~~~--~~~~~~----------   67 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPT-VSIDGS--DDPEIC----------   67 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTT-CEEEEE--SCGGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCC-ceeecC--CCHHHh----------
Confidence            35677786 9999999999999984  79999999877655544554421  111 112211  122222          


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                       ..-|++|.+||...... .+.   .+.+..|+    .+.+...+.+.+.    .+.+.++++|.
T Consensus        68 -~daDvVVitaG~~~~~g-~~R---~dl~~~N~----~i~~~i~~~i~~~----~p~ai~ivvtN  119 (143)
T d1llda1          68 -RDADMVVITAGPRQKPG-QSR---LELVGATV----NILKAIMPNLVKV----APNAIYMLITN  119 (143)
T ss_dssp             -TTCSEEEECCCCCCCTT-CCH---HHHHHHHH----HHHHHHHHHHHHH----CTTSEEEECCS
T ss_pred             -hCCcEEEEecccccCCC-Cch---hhhhhhhH----HHHHHHHHHHHhh----CCCeEEEEeCC
Confidence             14699999999853322 232   23455555    3445555555443    14566777765

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.96  E-value=0.0035  Score=44.69  Aligned_cols=41  Identities=29%  Similarity=0.235  Sum_probs=35.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHH
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~   72 (216)
                      .|++.|.|+ |.+|.++|..|+++|++|.+.+|++++.+...
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            478999998 99999999999999999999999876655443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.95  E-value=0.0011  Score=47.68  Aligned_cols=80  Identities=16%  Similarity=0.140  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHH-HHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLA-SVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~  106 (216)
                      -.|.+++|.|+ ||+|...++.+...|+ +|+++++++++++.+.+     + +....   .|.++.+ .+.+...+.  
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-----l-Ga~~~---i~~~~~d~~~~~~~~~~--   93 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-----L-GATEC---LNPKDYDKPIYEVICEK--   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-----T-TCSEE---ECGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-----c-CCcEE---EcCCCchhHHHHHHHHh--
Confidence            35778999986 9999999999999997 79999999887655432     2 32222   2333222 223333322  


Q ss_pred             hcCCccEEEECCcc
Q 027991          107 QHHQLNILINNAGI  120 (216)
Q Consensus       107 ~~~~id~li~~Ag~  120 (216)
                      ..+++|++|.++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            23579999999885

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.00053  Score=44.10  Aligned_cols=38  Identities=18%  Similarity=0.224  Sum_probs=34.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      +++||+++|.|. |.-|.++|+.|.++|++|++.|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999998 77899999999999999999998654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.94  E-value=0.0018  Score=45.80  Aligned_cols=41  Identities=22%  Similarity=0.208  Sum_probs=35.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            4778999876 9999999999999999999999997765543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.93  E-value=0.0023  Score=44.31  Aligned_cols=115  Identities=21%  Similarity=0.127  Sum_probs=67.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCcchHHHHHHHHhhc--CCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLALRG--VHVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++.|+|+ |.+|..++..++.+|  .++++.|.++++++.....+....  ......+...  .+.+++           
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~-----------   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT-----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh-----------
Confidence            4678896 999999999999998  489999999877654443332211  0122223222  222222           


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      ..-|++|.++|......+ +.   .+.+..|..-    .+...+.+.+.    .+.+.++++|.-
T Consensus        68 ~dadvvvitag~~~~~g~-~r---~~l~~~N~~i----~~~i~~~i~~~----~p~aivivvtNP  120 (142)
T d1guza1          68 ANSDIVIITAGLPRKPGM-TR---EDLLMKNAGI----VKEVTDNIMKH----SKNPIIIVVSNP  120 (142)
T ss_dssp             TTCSEEEECCSCCCCTTC-CH---HHHHHHHHHH----HHHHHHHHHHH----CSSCEEEECCSS
T ss_pred             cCCeEEEEEEecCCCCCC-ch---HHHHHHHHHH----HHHHHHHhhcc----CCCeEEEEecCC
Confidence            267999999998543222 22   2344455443    44444444433    146677777653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.93  E-value=0.0017  Score=46.68  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCC-HHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSS-LASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~  107 (216)
                      .|.+|+|.|+ |+||...++.+...|+ +|+++++++++.+.. +++     +... ++  |..+ ++...+..+..  .
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~-----Ga~~-~i--~~~~~~~~~~~~~~~~--~   95 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GATD-CL--NPRELDKPVQDVITEL--T   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCSE-EE--CGGGCSSCHHHHHHHH--H
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh-----CCCc-cc--CCccchhhhhhhHhhh--h
Confidence            4678999975 9999999999999998 688888888775433 222     2222 22  2221 22333333332  2


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                      .+++|++|.++|.
T Consensus        96 ~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 AGGVDYSLDCAGT  108 (174)
T ss_dssp             TSCBSEEEESSCC
T ss_pred             cCCCcEEEEeccc
Confidence            3589999999995

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.92  E-value=0.0012  Score=47.13  Aligned_cols=78  Identities=15%  Similarity=0.207  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++...     +. +.. .++  |-++ +.+++..+..  ..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-----~~-ga~-~~i--~~~~-~~~~~~~~~~--~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-----RL-GAD-HVV--DARR-DPVKQVMELT--RG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-----HT-TCS-EEE--ETTS-CHHHHHHHHT--TT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-----hc-ccc-eee--cCcc-cHHHHHHHhh--CC
Confidence            4678999886 9999999999988997 6777788876644332     22 222 222  3332 2333333321  22


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            469999999995

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.88  E-value=0.0019  Score=46.11  Aligned_cols=79  Identities=11%  Similarity=0.106  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC-CHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS-SLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~  107 (216)
                      .|.+++|.|+ +|+|...++.+...|+ +|+.+++++++.+. .+++     +... ++  |.. +.+.+.+.+++..  
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l-----Ga~~-~i--~~~~~~~~~~~~~~~~~--   95 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF-----GATE-CI--NPQDFSKPIQEVLIEMT--   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH-----TCSE-EE--CGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh-----CCcE-EE--eCCchhhHHHHHHHHHc--
Confidence            4778999988 6999999999999997 57777777666543 3333     3222 12  232 2233444444432  


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                      .+++|++|.+.|.
T Consensus        96 ~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 DGGVDYSFECIGN  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEeeecCCC
Confidence            3479999999985

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.86  E-value=0.0043  Score=43.01  Aligned_cols=115  Identities=12%  Similarity=0.085  Sum_probs=68.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHhhcC--CCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           33 TAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVKEIP--SAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++.|+|+ |.+|..+|..++.+|.  ++++.|.+++.++-....+....+  .........  .|.+++           
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHHh-----------
Confidence            4677886 9999999999998883  799999998776555545543211  111222221  122222           


Q ss_pred             CCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCC
Q 027991          109 HQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSE  173 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~  173 (216)
                      ..-|++|..||......+ +.   .+.+..|.    .+.+...+.+.+.    .+.+.++++|.-
T Consensus        68 ~~adiVvitag~~~~~g~-~r---~~l~~~n~----~i~~~i~~~i~~~----~p~aivivvtNP  120 (142)
T d1ojua1          68 KGSEIIVVTAGLARKPGM-TR---LDLAHKNA----GIIKDIAKKIVEN----APESKILVVTNP  120 (142)
T ss_dssp             TTCSEEEECCCCCCCSSC-CH---HHHHHHHH----HHHHHHHHHHHTT----STTCEEEECSSS
T ss_pred             ccccEEEEeccccCCCCC-ch---HHHHHHhh----HHHHHHHHHHHhh----CCCcEEEEecCC
Confidence            257999999997533221 22   33444443    3455555555543    246777777753

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.84  E-value=0.0055  Score=43.77  Aligned_cols=86  Identities=16%  Similarity=0.147  Sum_probs=60.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH---------------HHhhcCCCeEEEEEccCCCHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET---------------IVKEIPSAKVDAMELDLSSLAS   96 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~~~Dv~~~~~   96 (216)
                      +.+-|.|- |-+|..+|+.|++.|++|++.+|+.++.++..+.               +....  .....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHH
Confidence            45677876 9999999999999999999999998887665432               11111  112334446677788


Q ss_pred             HHHHHHHHHhhcCCccEEEECCcc
Q 027991           97 VRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        97 ~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      +.+..+.+......=+++|.....
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHhccccCcEEEecCcc
Confidence            888888776665555677776554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.76  E-value=0.00048  Score=48.32  Aligned_cols=42  Identities=12%  Similarity=0.130  Sum_probs=36.4

Q ss_pred             ccCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           22 EVTDGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        22 ~~~~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      +++...+++||++||+|| |.+|..-++.|++.|++|.+++..
T Consensus         4 ~lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           4 SLQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CEEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             cchhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            344557799999999999 779999999999999999999654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.75  E-value=0.002  Score=45.17  Aligned_cols=121  Identities=14%  Similarity=0.076  Sum_probs=71.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhc--CCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI--PSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .++.|+|+ |.+|..++..+..++. ++++.|++++.++-....+....  ...+..+...|  +.++           .
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-----------~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-----------L   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-----------c
Confidence            46888895 9999999998888884 89999998877665555554321  12233333322  2222           2


Q ss_pred             CCccEEEECCccCCCCCCCC-hHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcCCc
Q 027991          109 HQLNILINNAGIMGTPFMLS-KDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSSEG  174 (216)
Q Consensus       109 ~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  174 (216)
                      ..-|++|.++|....+.+.+ ..+=.+.+..|.    -+.+.+.+.+.+.    .+.+.++++|.-.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~----~p~aivivvtNPv  128 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKN----CPNAFIIVVTNPV  128 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHH----CTTSEEEECSSSH
T ss_pred             CCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhc----CCCeEEEEecCch
Confidence            36799999999864332221 111122345554    3445555555443    1466777777643

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.72  E-value=0.015  Score=40.63  Aligned_cols=118  Identities=13%  Similarity=0.045  Sum_probs=61.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEEcCCc--chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV-------HVVMGVRDIA--AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~-------~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .++.|+||+|.+|..++..|++.+-       .+++.+.+..  +++....++.... ......+..- ++.+   +.  
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~~---~~--   76 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA-LPLLKDVIAT-DKEE---IA--   76 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC-CTTEEEEEEE-SCHH---HH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccc-cccccccccC-cccc---cc--
Confidence            4799999999999999999987542       3555554432  2233222222221 1112212211 1111   11  


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEcC
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVSS  172 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  172 (216)
                           ....|++|.++|......+ +.++   .+..|+    ..++...+.+.+.   .+..+.|+.+|.
T Consensus        77 -----~~~~dvVVitag~~~~~g~-sr~d---ll~~N~----~i~k~~~~~i~k~---a~~~~~iivvsN  130 (154)
T d5mdha1          77 -----FKDLDVAILVGSMPRRDGM-ERKD---LLKANV----KIFKCQGAALDKY---AKKSVKVIVVGN  130 (154)
T ss_dssp             -----TTTCSEEEECCSCCCCTTC-CTTT---THHHHH----HHHHHHHHHHHHH---SCTTCEEEECSS
T ss_pred             -----cCCceEEEEecccCCCCCC-chhH---HHHHhH----HHHHHHHHHHHhh---CCCceEEEEecC
Confidence                 1368999999998644332 2222   234443    4555555555542   113455666664

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.012  Score=38.89  Aligned_cols=72  Identities=14%  Similarity=0.124  Sum_probs=55.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ..+.++.|.|| |-+|+-++....+.|.++++.+.+.+....          ..--.++..|..|.+.+.++....    
T Consensus         9 ~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~----   73 (111)
T d1kjqa2           9 PAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE----   73 (111)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh----
Confidence            34568999996 899999999999999999999988654221          111256788999999999888764    


Q ss_pred             CCccEEEE
Q 027991          109 HQLNILIN  116 (216)
Q Consensus       109 ~~id~li~  116 (216)
                       ++|++..
T Consensus        74 -~~DviT~   80 (111)
T d1kjqa2          74 -KPHYIVP   80 (111)
T ss_dssp             -CCSEEEE
T ss_pred             -CCceEEE
Confidence             5788854

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.71  E-value=0.0017  Score=47.58  Aligned_cols=79  Identities=18%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+++|.|+ |++|...+......|+ +|+++++++++++.+.     ++ +...  + .|-.+ +++.+.+.++. ..
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-----~~-Ga~~--~-~~~~~-~~~~~~i~~~t-~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-----AQ-GFEI--A-DLSLD-TPLHEQIAALL-GE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HT-TCEE--E-ETTSS-SCHHHHHHHHH-SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-----hc-cccE--E-EeCCC-cCHHHHHHHHh-CC
Confidence            4779999986 8999999998888887 7888898877654332     22 3322  1 23233 23333333332 23


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      .++|++|.+.|.
T Consensus        93 ~g~D~vid~vG~  104 (195)
T d1kola2          93 PEVDCAVDAVGF  104 (195)
T ss_dssp             SCEEEEEECCCT
T ss_pred             CCcEEEEECccc
Confidence            479999999985

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.69  E-value=0.0028  Score=45.13  Aligned_cols=79  Identities=13%  Similarity=0.116  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHH-HHHHHHHHHhh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLAS-VRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~~~~~~  107 (216)
                      .|.+++|.|+ +|+|...+..+...|+ +|+.+++++++++.+.+     + +.... +  |.++++. .++..+..  .
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-----~-GAd~~-i--n~~~~~~~~~~~~~~~--~   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-----F-GATDF-V--NPNDHSEPISQVLSKM--T   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----T-TCCEE-E--CGGGCSSCHHHHHHHH--H
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-----c-CCcEE-E--cCCCcchhHHHHHHhh--c
Confidence            5678999986 8899999999999987 68888998887655432     2 33222 2  3333222 22222222  2


Q ss_pred             cCCccEEEECCcc
Q 027991          108 HHQLNILINNAGI  120 (216)
Q Consensus       108 ~~~id~li~~Ag~  120 (216)
                      .+++|++|.++|.
T Consensus        96 ~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 NGGVDFSLECVGN  108 (175)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCcceeeeecCC
Confidence            2479999999995

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.65  E-value=0.0029  Score=44.64  Aligned_cols=41  Identities=17%  Similarity=0.114  Sum_probs=34.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDV   71 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~   71 (216)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            4678899865 9999999999999999999999987765543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.0017  Score=47.54  Aligned_cols=44  Identities=25%  Similarity=0.183  Sum_probs=38.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIV   76 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~   76 (216)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            68899998 889999999999999999999999887766655544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.58  E-value=0.0018  Score=46.60  Aligned_cols=51  Identities=16%  Similarity=0.263  Sum_probs=44.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI   79 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~   79 (216)
                      .++++|.|+|.|+ ||-+++++..|...| +|.+..|+.++.++..+.+....
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~   64 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL   64 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhh
Confidence            4588999999987 899999999997766 99999999999988888887654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.52  E-value=0.00036  Score=51.65  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=36.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~   70 (216)
                      +++||+++|-| -|.+|..+++.|.+.|++|++++.+.+...+
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            58999999997 5899999999999999999999887665544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.42  E-value=0.0074  Score=43.10  Aligned_cols=40  Identities=25%  Similarity=0.206  Sum_probs=36.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      ...+++||.++|.|-|.-.|..++..|+++|++|..+..+
T Consensus        23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            3458999999999999999999999999999999988755

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.0083  Score=45.18  Aligned_cols=64  Identities=16%  Similarity=0.263  Sum_probs=48.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEE
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAM   87 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~   87 (216)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|..                   ..+.+.+.+.+.+..|...+..+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            467889999996 9999999999999997 78888632                   23456667777777776666655


Q ss_pred             EccCC
Q 027991           88 ELDLS   92 (216)
Q Consensus        88 ~~Dv~   92 (216)
                      ...++
T Consensus       106 ~~~~~  110 (247)
T d1jw9b_         106 NALLD  110 (247)
T ss_dssp             CSCCC
T ss_pred             hhhhh
Confidence            54444

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.29  E-value=0.0026  Score=45.32  Aligned_cols=45  Identities=16%  Similarity=0.322  Sum_probs=38.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETI   75 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~   75 (216)
                      ++|.|+|.|+ ||-+.+++..|.+.|. +|.++.|+.++.+...+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5788999988 9999999999999997 7999999988776665543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.28  E-value=0.0029  Score=46.40  Aligned_cols=39  Identities=15%  Similarity=0.026  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .++.||++.|.|- |.||..+|+.+...|.+|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4578999999987 99999999999999999999887643

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.23  E-value=0.0056  Score=44.26  Aligned_cols=68  Identities=21%  Similarity=0.166  Sum_probs=46.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHH-----HHHhhcCCCeEEEEEccCCCH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE-----TIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      ...+.+|++.|.|. |.||..+++.+...|.+|+..++..........     .+.+.....++..+.+.++++
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~  111 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPE  111 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTT
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCch
Confidence            34678999999986 999999999999999999999887543221110     011111134677777777753

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.21  E-value=0.0071  Score=43.82  Aligned_cols=105  Identities=18%  Similarity=0.109  Sum_probs=62.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHH-------HHHhhcCCCeEEEEEccCCCHHHH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKE-------TIVKEIPSAKVDAMELDLSSLASV   97 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~~~~~~   97 (216)
                      ...++.++++.|.|. |.||.++++.+...|.+|+..++..........       .+.......++..+.+.++++  .
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~--T  114 (188)
T d2naca1          38 HAYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPE--T  114 (188)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTT--T
T ss_pred             cceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhccccccc--c
Confidence            345688999999987 999999999999999999999986433211111       112222245677777887763  2


Q ss_pred             HHHHHHH-HhhcCCccEEEECCccCCCCCCCChHHHHHHH
Q 027991           98 RNFASEY-NIQHHQLNILINNAGIMGTPFMLSKDNIELQF  136 (216)
Q Consensus        98 ~~~~~~~-~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~  136 (216)
                      +.++++- .+.. +-+.++.|.+-.   .-.+++++.+.+
T Consensus       115 ~~li~~~~l~~m-k~ga~lIN~aRG---~ivd~~aL~~aL  150 (188)
T d2naca1         115 EHMINDETLKLF-KRGAYIVNTARG---KLCDRDAVARAL  150 (188)
T ss_dssp             TTCBSHHHHTTS-CTTEEEEECSCG---GGBCHHHHHHHH
T ss_pred             hhhhHHHHHHhC-CCCCEEEecCch---hhhhHHHHHHHH
Confidence            3333321 1222 345555555432   112455544444

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.21  E-value=0.0064  Score=43.16  Aligned_cols=44  Identities=30%  Similarity=0.305  Sum_probs=38.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~   68 (216)
                      ...+++||.++|.|-|.-.|..++..|.++|++|.++......+
T Consensus        31 y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          31 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             cCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            35679999999999999999999999999999999987665443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0024  Score=52.45  Aligned_cols=64  Identities=22%  Similarity=0.265  Sum_probs=49.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC-------------------CcchHHHHHHHHhhcCCCeEEEEE
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRD-------------------IAAGKDVKETIVKEIPSAKVDAME   88 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~   88 (216)
                      +++.+|||+|+ ||||.++++.|+..|. ++.++|..                   ..+++.+.+.++...|..++....
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            56778999998 8899999999999997 79888632                   134566677777777777777777


Q ss_pred             ccCCC
Q 027991           89 LDLSS   93 (216)
Q Consensus        89 ~Dv~~   93 (216)
                      .++.+
T Consensus       114 ~~i~~  118 (426)
T d1yovb1         114 NKIQD  118 (426)
T ss_dssp             SCGGG
T ss_pred             ccccc
Confidence            66654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.19  E-value=0.0067  Score=44.23  Aligned_cols=66  Identities=14%  Similarity=0.128  Sum_probs=47.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH---------HHHHHHhhcCCCeEEEEEccCCCH
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD---------VKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      ....+.||++.|.|. |.||..+++.+...|.+|+..++.......         ..+++..   ..++..+.+.++++
T Consensus        43 ~~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~---~sD~i~~~~plt~~  117 (193)
T d1mx3a1          43 GAARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLF---HSDCVTLHCGLNEH  117 (193)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHH---HCSEEEECCCCCTT
T ss_pred             CceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhccc---cCCEEEEeeccccc
Confidence            345689999999987 999999999999999999999886543211         1122222   34677777777753

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.16  E-value=0.0025  Score=46.21  Aligned_cols=45  Identities=22%  Similarity=0.115  Sum_probs=38.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHh
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK   77 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~   77 (216)
                      |++.|.|+ |-+|..+|..++..|++|++.+++.+.+++..+.+..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~   49 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAK   49 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhh
Confidence            46888988 8999999999999999999999998877766655543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.14  E-value=0.0056  Score=43.09  Aligned_cols=86  Identities=19%  Similarity=0.162  Sum_probs=52.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC-----CCeEEEEEccCCCHHHHHHHH---HHHH
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-----SAKVDAMELDLSSLASVRNFA---SEYN  105 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~---~~~~  105 (216)
                      +-|.|- |-+|..+|+.|+++|++|++.+|++++.++..+.......     -.+..++-.-+.+++.+++.+   +.+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            566655 9999999999999999999999998776654331100000     012234444566777777765   2333


Q ss_pred             hhcCCccEEEECCcc
Q 027991          106 IQHHQLNILINNAGI  120 (216)
Q Consensus       106 ~~~~~id~li~~Ag~  120 (216)
                      .....=+++|.....
T Consensus        82 ~~~~~g~iiid~sT~   96 (161)
T d1vpda2          82 EGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HHCCTTCEEEECSCC
T ss_pred             hccCCCCEEEECCCC
Confidence            333333566655443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.08  E-value=0.0015  Score=47.39  Aligned_cols=65  Identities=23%  Similarity=0.238  Sum_probs=45.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH-HHHHHHhhcCCCeEEEEEccCCC
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD-VKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      .+.||++.|.|. |.||..+++.+...|.+|+..+|+...... ..+.+.+.....++..+.+.+++
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~~  104 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNK  104 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCST
T ss_pred             cccCceEEEecc-ccccccceeeeeccccccccccccccccceeeeechhhhhhccchhhccccccc
Confidence            478999999998 779999999999999999999987533211 01112222224566677776664

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0079  Score=42.90  Aligned_cols=44  Identities=20%  Similarity=0.228  Sum_probs=39.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~   68 (216)
                      ...+++||.++|.|-|.-+|..++..|.++|++|.++......+
T Consensus        33 ~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          33 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             hCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            35678999999999999999999999999999999988776543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.88  E-value=0.028  Score=39.79  Aligned_cols=78  Identities=18%  Similarity=0.204  Sum_probs=58.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+..+++|.|+ |--|+.-++.....|++|.+.|.+.+++++....+.     .++.   .-..+++.+.+.+.      
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~-----~~~~---~~~~~~~~l~~~~~------   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVE---LLYSNSAEIETAVA------   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSE---EEECCHHHHHHHHH------
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc-----ccce---eehhhhhhHHHhhc------
Confidence            35678999998 899999999999999999999999887665544332     2222   23456666666555      


Q ss_pred             CCccEEEECCccCC
Q 027991          109 HQLNILINNAGIMG  122 (216)
Q Consensus       109 ~~id~li~~Ag~~~  122 (216)
                       .-|++|.++-+.+
T Consensus        95 -~aDivI~aalipG  107 (168)
T d1pjca1          95 -EADLLIGAVLVPG  107 (168)
T ss_dssp             -TCSEEEECCCCTT
T ss_pred             -cCcEEEEeeecCC
Confidence             5699999998864

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.83  E-value=0.0047  Score=41.77  Aligned_cols=70  Identities=20%  Similarity=0.215  Sum_probs=49.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      |.++|.|. +.+|..+++.|  +|..|++++.+++..+..    ..    ..+.++.+|.++++.++++      ...+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~----~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LR----SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HH----TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hh----cCccccccccCCHHHHHHh------hhhcC
Confidence            56788886 88999999998  466788888887654432    22    2467888999998877653      22356


Q ss_pred             cEEEECC
Q 027991          112 NILINNA  118 (216)
Q Consensus       112 d~li~~A  118 (216)
                      +.+|...
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            7777644

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.79  E-value=0.013  Score=42.47  Aligned_cols=40  Identities=18%  Similarity=-0.002  Sum_probs=35.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ...+.||++.|.|. |.||..+++.+...|.+|+..++...
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            35678999999988 99999999999999999999987654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.70  E-value=0.0079  Score=39.87  Aligned_cols=35  Identities=23%  Similarity=0.153  Sum_probs=31.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478999998 99999999999999999999988764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.64  E-value=0.031  Score=37.73  Aligned_cols=73  Identities=14%  Similarity=0.235  Sum_probs=55.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQL  111 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i  111 (216)
                      ++.|.|++|-.|..+++.+.++|++++.. +++....          ....+   +..|+|.++...+.++.+.+.  ++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~----------~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE----------LDSPD---VVIDFSSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE----------CSCCS---EEEECSCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH----------hccCC---EEEEecCHHHHHHHHHHHHhc--CC
Confidence            58999999999999999999999987654 4433211          11223   346999999999999988765  56


Q ss_pred             cEEEECCcc
Q 027991          112 NILINNAGI  120 (216)
Q Consensus       112 d~li~~Ag~  120 (216)
                      -+++-+.|+
T Consensus        67 p~ViGTTG~   75 (128)
T d1vm6a3          67 GLVLGTTAL   75 (128)
T ss_dssp             EEEECCCSC
T ss_pred             CEEEEcCCC
Confidence            788988887

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.63  E-value=0.02  Score=41.75  Aligned_cols=64  Identities=17%  Similarity=0.083  Sum_probs=46.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH------HHHHHHHhhcCCCeEEEEEccCCCH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK------DVKETIVKEIPSAKVDAMELDLSSL   94 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~~~   94 (216)
                      .++.||++.|.|. |.||..+++.+...|.+|+..++......      ...+++..   ..++..+.+.++++
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~---~~D~v~~~~plt~~  110 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFK---QSDVIDLHVPGIEQ  110 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHH---HCSEEEECCCCCGG
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHH---hcccceeeeccccc
Confidence            4678999999988 99999999999999999999987643211      01222322   34677777777754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.54  E-value=0.012  Score=39.27  Aligned_cols=36  Identities=25%  Similarity=0.272  Sum_probs=32.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .+++++|.|| |.+|.++|..|.++|.+|.++.+...
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            4688999988 99999999999999999999998764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.52  E-value=0.012  Score=43.59  Aligned_cols=35  Identities=34%  Similarity=0.451  Sum_probs=31.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      +.|+|+|+|| |-.|+..|..|+++|++|.+++|..
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4568999998 9999999999999999999999853

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.51  E-value=0.013  Score=39.23  Aligned_cols=37  Identities=24%  Similarity=0.128  Sum_probs=32.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .++|+++|.|| |.+|.++|..|.+.|.+|.++.+...
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            35678999987 89999999999999999999988753

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.44  E-value=0.069  Score=37.22  Aligned_cols=85  Identities=11%  Similarity=0.075  Sum_probs=52.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCCcchHHHHHHHHh-h---------cCCCeEEEEEccCCCHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGV--HVVMGVRDIAAGKDVKETIVK-E---------IPSAKVDAMELDLSSLASVRN   99 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~-~---------~~~~~~~~~~~Dv~~~~~~~~   99 (216)
                      |.++|.|. |-+|.++|+.|.+.|.  +|+..+++.+..+.+.+.-.. .         .....+.++..   -++.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~---p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS---PVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS---CHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccC---Cchhhhh
Confidence            46888875 9999999999999996  688888887665544332100 0         00112222222   3566777


Q ss_pred             HHHHHHhhcCCccEEEECCcc
Q 027991          100 FASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus       100 ~~~~~~~~~~~id~li~~Ag~  120 (216)
                      .++++......=.+++...+.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            777776665544555565554

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.44  E-value=0.0093  Score=40.10  Aligned_cols=35  Identities=23%  Similarity=0.275  Sum_probs=31.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .|+++|.|| |.||.++|..|.+.|.+|.++.|...
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            478999998 89999999999999999999998753

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.41  E-value=0.0098  Score=41.50  Aligned_cols=35  Identities=20%  Similarity=0.107  Sum_probs=31.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~   68 (216)
                      +++|.|+ |.+|..++..|++.|++|.+++|+.+..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            5888988 9999999999999999999999987653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.35  E-value=0.011  Score=39.22  Aligned_cols=35  Identities=26%  Similarity=0.084  Sum_probs=31.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .|+++|.|| |.+|.++|..|.+.|.+|.++.|...
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            477889988 99999999999999999999988754

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.31  E-value=0.0069  Score=43.97  Aligned_cols=38  Identities=24%  Similarity=0.174  Sum_probs=32.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKD   70 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~   70 (216)
                      +++.|.|+ |..|.++|..|++.|++|.+.+|+++..+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~   45 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRL   45 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHH
Confidence            56889988 889999999999999999999998665443

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.30  E-value=0.01  Score=39.43  Aligned_cols=35  Identities=17%  Similarity=0.143  Sum_probs=31.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .|+++|.|| |.+|.++|..|...|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            578999988 99999999999999999999998753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.29  E-value=0.021  Score=38.15  Aligned_cols=33  Identities=36%  Similarity=0.340  Sum_probs=29.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      .+.++|+|| |-||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            357889988 999999999999999999999865

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.29  E-value=0.049  Score=38.48  Aligned_cols=40  Identities=20%  Similarity=0.238  Sum_probs=33.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~   74 (216)
                      +-|.| .|-+|..+++.|++.|++|.+.+|++++.++..++
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            55554 59999999999999999999999998877766554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.28  E-value=0.036  Score=38.73  Aligned_cols=87  Identities=11%  Similarity=0.006  Sum_probs=51.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC-----CCeEEEEEccCCCHHHHHHHHHH---H
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP-----SAKVDAMELDLSSLASVRNFASE---Y  104 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~---~  104 (216)
                      ++.+.|- |-+|.++|+.|+++|++|.+.+|+.++.+.....-.....     -.....+..-+.+.+.++.++..   +
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            4666654 9999999999999999999999997765543321100000     01223444556666777766543   2


Q ss_pred             HhhcCCccEEEECCcc
Q 027991          105 NIQHHQLNILINNAGI  120 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~  120 (216)
                      .....+=+++|.....
T Consensus        82 ~~~l~~g~iiid~st~   97 (162)
T d3cuma2          82 LAHIAPGTLVLECSTI   97 (162)
T ss_dssp             HHHSCTTCEEEECSCC
T ss_pred             cccCCCCCEEEECCCC
Confidence            2222222466655544

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.27  E-value=0.018  Score=38.24  Aligned_cols=36  Identities=28%  Similarity=0.066  Sum_probs=32.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      -.+.++|.|| |.||.++|..|++.|.+|.++.+...
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            4578999998 99999999999999999999987754

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.25  E-value=0.077  Score=41.22  Aligned_cols=80  Identities=18%  Similarity=0.069  Sum_probs=54.5

Q ss_pred             CCCEEE-EeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc-CCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAI-VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~l-ItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ++++|| +=.++|+++.+.+    ..|++|+.++.+...++.+.+.+.... ...++.+++.|+.+      .++.....
T Consensus       132 ~~~rVLdlf~~tG~~sl~aa----~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVAA----AAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHHH----HTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHHHH----hCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhhc
Confidence            467788 5555666666544    578999999999888877777665442 23468888877643      34444444


Q ss_pred             cCCccEEEECCc
Q 027991          108 HHQLNILINNAG  119 (216)
Q Consensus       108 ~~~id~li~~Ag  119 (216)
                      ..+.|+||.+.=
T Consensus       202 ~~~fD~IilDPP  213 (309)
T d2igta1         202 GSTYDIILTDPP  213 (309)
T ss_dssp             TCCBSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            457899998753

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.23  E-value=0.021  Score=38.04  Aligned_cols=34  Identities=38%  Similarity=0.339  Sum_probs=30.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      +|.++|.|| |.+|.++|..|.+.|.+|.++.+..
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            478899988 9999999999999999999998764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.14  Score=39.45  Aligned_cols=77  Identities=10%  Similarity=0.056  Sum_probs=54.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ..++|+||-.|++.|+   ++..++++|+ +|+.++.++. +..+.+...+.....++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            3578999999998775   5566777897 7999998865 34444444444445679999999876421          


Q ss_pred             hcCCccEEEECC
Q 027991          107 QHHQLNILINNA  118 (216)
Q Consensus       107 ~~~~id~li~~A  118 (216)
                      ...++|++|...
T Consensus        99 ~~~~~D~Ivse~  110 (311)
T d2fyta1          99 PVEKVDVIISEW  110 (311)
T ss_dssp             SCSCEEEEEECC
T ss_pred             ccccceEEEEee
Confidence            124789999753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.04  E-value=0.022  Score=40.18  Aligned_cols=40  Identities=25%  Similarity=0.303  Sum_probs=36.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ...+.||+++|.|- |-||+.+|+.+...|++|++++..+-
T Consensus        19 ~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          19 DVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccc
Confidence            45689999999988 79999999999999999999998863

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.02  E-value=0.013  Score=38.66  Aligned_cols=35  Identities=20%  Similarity=0.123  Sum_probs=31.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .|+++|.|| |.+|.++|..|.+.|.+|.++.+...
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            478888887 99999999999999999999988754

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.01  E-value=0.1  Score=40.58  Aligned_cols=82  Identities=15%  Similarity=0.068  Sum_probs=54.9

Q ss_pred             CCCCEEEEeC-CCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG-~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+|++||=.+ |+|+++.+++    ..+.+|+.++.+...++.+.+.+.... -.++.++..|+.+..      +.....
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~~------~~~~~~  212 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHLA----LGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDLL------RRLEKE  212 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHHH------HHHHHT
T ss_pred             hCCCeeeccCCCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHHh------hhhHhh
Confidence            4788888554 4566665543    345689999999988888777776542 246788888775532      233334


Q ss_pred             cCCccEEEECCccC
Q 027991          108 HHQLNILINNAGIM  121 (216)
Q Consensus       108 ~~~id~li~~Ag~~  121 (216)
                      ..+.|++|.++-.+
T Consensus       213 ~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         213 GERFDLVVLDPPAF  226 (318)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             hcCCCEEEEcCCcc
Confidence            45799999987544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.97  E-value=0.014  Score=39.03  Aligned_cols=35  Identities=20%  Similarity=0.130  Sum_probs=31.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .|+++|.|| |-||.++|..|.+.|.+|.++.+...
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            478999988 99999999999999999999988754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.97  E-value=0.069  Score=36.28  Aligned_cols=76  Identities=12%  Similarity=0.127  Sum_probs=53.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CeEEEE-EcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRG-VHVVMG-VRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g-~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++.|.|++|-.|..+++...+.. .+++.. ++. +....    +...  +.+   +..|+|.++...+.++.+.+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~-~~~~~----~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAG-DPLSL----LTDG--NTE---VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTT-CCTHH----HHTT--TCS---EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC-Cchhh----hccc--cCC---EEEEcccHHHHHHHHHHHHhc--C
Confidence            58899999999999999887654 565543 333 22222    2211  222   457999999999999988765  6


Q ss_pred             ccEEEECCcc
Q 027991          111 LNILINNAGI  120 (216)
Q Consensus       111 id~li~~Ag~  120 (216)
                      +-+++-+.|.
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            7788888887

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.87  E-value=0.018  Score=38.17  Aligned_cols=36  Identities=31%  Similarity=0.341  Sum_probs=32.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .+|.++|.|| |-+|.++|..|.+.|.+|.++.+...
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4688999988 99999999999999999999988753

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.83  E-value=0.015  Score=41.44  Aligned_cols=35  Identities=17%  Similarity=0.117  Sum_probs=30.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~   66 (216)
                      +|+|+|+|| |-.|+..|..|+++|+ .|.+..++..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            688999998 9999999999999998 5988887653

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.77  E-value=0.043  Score=39.20  Aligned_cols=39  Identities=23%  Similarity=0.064  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ....+|+++|+|| |--|++.|..|+++|++|.+..+...
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3356789999998 89999999999999999999988754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.77  E-value=0.1  Score=37.25  Aligned_cols=42  Identities=17%  Similarity=0.123  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVK   72 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~   72 (216)
                      ..-+++|.|+ |-.|+.-++.....|+.|.+.|.+.+..++..
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            4568999998 89999999999999999999999988765543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.72  E-value=0.015  Score=38.90  Aligned_cols=36  Identities=25%  Similarity=0.163  Sum_probs=32.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcc
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAA   67 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~   67 (216)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.|...-
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            578999988 999999999999999999999887643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.65  E-value=0.22  Score=38.44  Aligned_cols=77  Identities=12%  Similarity=0.082  Sum_probs=53.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+||+||-.|++.|+   ++..++++|+ +|+.++.++ ....+.+......-..++.++..|+.+.+          ..
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE----------LP   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC----------CS
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHcc----------cc
Confidence            478999999988775   4556777897 699999775 34555554444433557999999987642          12


Q ss_pred             cCCccEEEECCc
Q 027991          108 HHQLNILINNAG  119 (216)
Q Consensus       108 ~~~id~li~~Ag  119 (216)
                      ..++|+++...-
T Consensus        98 ~~~~D~ivs~~~  109 (316)
T d1oria_          98 VEKVDIIISEWM  109 (316)
T ss_dssp             SSCEEEEEECCC
T ss_pred             cceeEEEeeeee
Confidence            247899987644

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.53  E-value=0.011  Score=42.67  Aligned_cols=63  Identities=13%  Similarity=0.102  Sum_probs=45.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH------HHHHHHHhhcCCCeEEEEEccCCC
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK------DVKETIVKEIPSAKVDAMELDLSS   93 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~~   93 (216)
                      .++.++++.|.|. |.||..+++.+...|.+|+..++......      ...+++.+   ..++..+.+.+++
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~---~sDii~i~~plt~  108 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLN---MSDVVSLHVPENP  108 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHH---HCSEEEECCCSST
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHh---hccceeecccCCc
Confidence            3578999999976 99999999999999999999987643211      01222322   2467777777775

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.53  E-value=0.061  Score=39.84  Aligned_cols=78  Identities=8%  Similarity=-0.060  Sum_probs=58.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           28 DGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        28 ~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      ..+++++|=.|.+.|.   ++..|+++|.+|+.++.+++-++.+.+.....  +.++.++..|+.+.+           .
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------~   98 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------I   98 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------C
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------c
Confidence            4567889999998775   67788899999999999988777766655544  557888999987532           1


Q ss_pred             cCCccEEEECCccC
Q 027991          108 HHQLNILINNAGIM  121 (216)
Q Consensus       108 ~~~id~li~~Ag~~  121 (216)
                      .+.+|++++.-+..
T Consensus        99 ~~~fD~i~~~~~~~  112 (246)
T d1y8ca_          99 NRKFDLITCCLDST  112 (246)
T ss_dssp             SCCEEEEEECTTGG
T ss_pred             cccccccceeeeee
Confidence            24789999765543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.51  E-value=0.33  Score=37.55  Aligned_cols=81  Identities=12%  Similarity=0.076  Sum_probs=54.8

Q ss_pred             CCCEEE-EeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhc-CCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           30 SGLTAI-VTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEI-PSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~k~~l-ItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +|++|| +-.++|+++.+.    +..|+ .|+.++.+...++.+.+.+.... ...++.+++.|+-+      .++....
T Consensus       144 ~g~~VLdlf~~~G~~sl~a----a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~------~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVAA----AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD------YFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHHH----HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH------HHHHHHH
T ss_pred             CCCceeecCCCCcHHHHHH----HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH------HHHHHHh
Confidence            578888 455556666543    34687 69999999988888777775542 13468889988743      3334444


Q ss_pred             hcCCccEEEECCcc
Q 027991          107 QHHQLNILINNAGI  120 (216)
Q Consensus       107 ~~~~id~li~~Ag~  120 (216)
                      +..+.|++|...=.
T Consensus       214 ~~~~fD~Ii~DPP~  227 (317)
T d2b78a2         214 HHLTYDIIIIDPPS  227 (317)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             hcCCCCEEEEcChh
Confidence            45689999988543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.50  E-value=0.11  Score=36.58  Aligned_cols=123  Identities=11%  Similarity=0.063  Sum_probs=63.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-----CCeEEEEEcCCcchHHHHHHHHh---hcC-CCeEEEEEccCCCHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALR-----GVHVVMGVRDIAAGKDVKETIVK---EIP-SAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~-----g~~Vi~~~r~~~~~~~~~~~~~~---~~~-~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      .++.|.||++.....+...++.+     +.+|+++|.++++++...+.+..   ... ..++.. ..   |.   ++.+ 
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---d~---~eal-   75 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-TT---DP---EEAF-   75 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-ES---CH---HHHH-
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-cC---Ch---hhcc-
Confidence            46777888654333343444332     24899999998887644333332   211 112221 11   22   2222 


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHHH----------------HhHHHHHHHHHHHHHHHhhccCCCCcE
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFATN----------------HLGHFLLTNLLLDTMKKTARKSGGEGR  166 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N----------------~~~~~~l~~~~~~~~~~~~~~~~~~g~  166 (216)
                            ..-|++|+.+|.....    .+.-++.+..|                ..-.+-+.+.+.+.+.+.    .+.+.
T Consensus        76 ------~~AD~Vvitag~~~~~----g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~----~P~A~  141 (167)
T d1u8xx1          76 ------TDVDFVMAHIRVGKYA----MRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY----SPDAW  141 (167)
T ss_dssp             ------SSCSEEEECCCTTHHH----HHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCE
T ss_pred             ------CCCCEEEECCCcCCCC----ceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhh----CCCeE
Confidence                  2679999999985211    11122223333                122344556666666654    25678


Q ss_pred             EEEEcCCccc
Q 027991          167 IINVSSEGHR  176 (216)
Q Consensus       167 iv~isS~~~~  176 (216)
                      ++++|.-...
T Consensus       142 li~~TNPvdv  151 (167)
T d1u8xx1         142 MLNYSNPAAI  151 (167)
T ss_dssp             EEECCSCHHH
T ss_pred             EEEeCCHHHH
Confidence            8888864433

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.44  E-value=0.021  Score=42.74  Aligned_cols=34  Identities=24%  Similarity=0.213  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      +|+|+|+|| |-=|+..|..|+++|++|.+..++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999988 8889999999999999999997653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.33  E-value=0.045  Score=40.77  Aligned_cols=47  Identities=19%  Similarity=0.187  Sum_probs=39.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKET   74 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~   74 (216)
                      .+++||+++|-|- |..|..+|+.|.+.|++|++++.+....+....+
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            4589999999986 9999999999999999999998887665555443

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.31  E-value=0.028  Score=38.82  Aligned_cols=41  Identities=12%  Similarity=0.232  Sum_probs=33.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CeEEEEEcCCcchHHHHHH
Q 027991           33 TAIVTGATSGIGTETARVLALRG-VHVVMGVRDIAAGKDVKET   74 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~   74 (216)
                      ++.+.|+ |-+|.++++.|++.| ++|++++|+.++.+...++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3567766 999999999999888 7999999998776655443

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.31  E-value=0.044  Score=39.59  Aligned_cols=82  Identities=10%  Similarity=0.071  Sum_probs=61.1

Q ss_pred             CCEEE-EeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           31 GLTAI-VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        31 ~k~~l-ItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +.+++ +|-|+||...++.+.+ . +.+|+.+|++++.++.+.+.+...  +.++.+++.++++...+   +...  ..+
T Consensus        24 ~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~--~~~   94 (192)
T d1m6ya2          24 EKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTL--GIE   94 (192)
T ss_dssp             TCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHT--TCS
T ss_pred             CCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHc--CCC
Confidence            34444 7888899999999887 3 468999999998887777666543  56899999999875443   2221  235


Q ss_pred             CccEEEECCccC
Q 027991          110 QLNILINNAGIM  121 (216)
Q Consensus       110 ~id~li~~Ag~~  121 (216)
                      .+|.++..-|++
T Consensus        95 ~vdgIl~DlGvS  106 (192)
T d1m6ya2          95 KVDGILMDLGVS  106 (192)
T ss_dssp             CEEEEEEECSCC
T ss_pred             Ccceeeeccchh
Confidence            899999999985

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.31  E-value=0.032  Score=37.38  Aligned_cols=36  Identities=17%  Similarity=0.070  Sum_probs=32.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ..+.++|.|| |-||.++|..|...|.+|.++.+...
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            3578999998 99999999999999999999987753

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.22  E-value=0.3  Score=35.10  Aligned_cols=77  Identities=22%  Similarity=0.177  Sum_probs=55.6

Q ss_pred             CCCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           25 DGIDGSGLTAIVTGATSG-IGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~g-iG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      ...+++|+++|=.|++.| +|.+    ++..|+ +|+.++.+++.++.+.+.+...  +.+..++..|+.+.        
T Consensus        41 ~~~dl~g~~vLDlg~GtG~l~i~----a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~--------  106 (201)
T d1wy7a1          41 SLGDIEGKVVADLGAGTGVLSYG----ALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF--------  106 (201)
T ss_dssp             HTTSSTTCEEEEETCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC--------
T ss_pred             hcCCCCCCEEEECcCcchHHHHH----HHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh--------
Confidence            356789999997776655 4443    456786 8999999988777776665543  56788888887542        


Q ss_pred             HHHhhcCCccEEEECCcc
Q 027991          103 EYNIQHHQLNILINNAGI  120 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~  120 (216)
                           .+++|++|.|.=+
T Consensus       107 -----~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 -----NSRVDIVIMNPPF  119 (201)
T ss_dssp             -----CCCCSEEEECCCC
T ss_pred             -----CCcCcEEEEcCcc
Confidence                 3479999988754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.18  E-value=0.21  Score=38.82  Aligned_cols=117  Identities=13%  Similarity=0.096  Sum_probs=70.7

Q ss_pred             CCCEEEEeCC-CCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           30 SGLTAIVTGA-TSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        30 ~~k~~lItG~-s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      +|++||=.++ +|+++..++    ..|+ +|+.++.+++.++.+.+.+....-..++.++..|+.+      ........
T Consensus       145 ~g~~VLDl~~g~G~~si~~a----~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHAA----IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhhhh----hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            4788885555 456666544    4676 7999999998888777777655333467888877653      22333334


Q ss_pred             cCCccEEEECCccCCCCCCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcEEEEEc
Q 027991          108 HHQLNILINNAGIMGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTARKSGGEGRIINVS  171 (216)
Q Consensus       108 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~is  171 (216)
                      ..++|++|.++-.+.+.    ..+....    ......+.+.+++.++       ++|.+++.|
T Consensus       215 ~~~fD~Vi~DpP~~~~~----~~~~~~~----~~~y~~l~~~a~~ll~-------pGG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQH----EKDLKAG----LRAYFNVNFAGLNLVK-------DGGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCSS----GGGHHHH----HHHHHHHHHHHHTTEE-------EEEEEEEEE
T ss_pred             cCCCCchhcCCccccCC----HHHHHHH----HHHHHHHHHHHHHHcC-------CCcEEEEEe
Confidence            46899999886554322    2222211    1122335566666665       467666544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.12  E-value=0.023  Score=40.61  Aligned_cols=42  Identities=17%  Similarity=0.245  Sum_probs=32.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHh
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVK   77 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~   77 (216)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|..+.  +..+.+..
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            4778887 999999999999999999999986442  33444443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.09  E-value=0.042  Score=37.13  Aligned_cols=36  Identities=22%  Similarity=0.198  Sum_probs=32.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .+|+++|.|| |.+|.++|..|.+.|.+|.++.+...
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4688999987 99999999999999999999988754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.05  E-value=0.033  Score=38.59  Aligned_cols=41  Identities=10%  Similarity=0.219  Sum_probs=33.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHH
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~   75 (216)
                      +.+.|+ |-+|.++++.|.+.|++|++.+|+.++.++..+++
T Consensus         3 Ig~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            556654 99999999999999999999999987766554443

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.99  E-value=0.25  Score=32.24  Aligned_cols=82  Identities=10%  Similarity=0.170  Sum_probs=55.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ||++||+--...+-..+...|-+.|++|+....+.   +++.+.+...  ...+.++-.++-+.+.+ ++++++++....
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~---~~al~~~~~~--~~dliilD~~mp~~~G~-e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNG---REAVEKYKEL--KPDIVTMDITMPEMNGI-DAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH--CCSEEEEECSCGGGCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCH---HHHHHHHHhc--cCCEEEEecCCCCCCHH-HHHHHHHHhCCC
Confidence            78999999999999999999999999987655553   3444455544  33454444444444333 466666666666


Q ss_pred             ccEEEECC
Q 027991          111 LNILINNA  118 (216)
Q Consensus       111 id~li~~A  118 (216)
                      +-+++..+
T Consensus        75 ~pvi~ls~   82 (118)
T d1u0sy_          75 AKIIVCSA   82 (118)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEEc
Confidence            77776653

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.94  E-value=0.23  Score=37.68  Aligned_cols=78  Identities=14%  Similarity=0.124  Sum_probs=53.0

Q ss_pred             CEEEEeCCCCc-hHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~g-iG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      ++++-.|+++| |+.+++ +  ...++|+.++.+.+.++-+.+......-..++.+...|+.+.         ..+.+++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            45564555444 555554 3  356799999999988877777766543345678888888653         2234578


Q ss_pred             ccEEEECCccC
Q 027991          111 LNILINNAGIM  121 (216)
Q Consensus       111 id~li~~Ag~~  121 (216)
                      +|++|.|.=+.
T Consensus       180 fDlIVsNPPYI  190 (271)
T d1nv8a_         180 IEMILSNPPYV  190 (271)
T ss_dssp             CCEEEECCCCB
T ss_pred             ccEEEEccccc
Confidence            99999997654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.80  E-value=0.25  Score=34.60  Aligned_cols=121  Identities=14%  Similarity=0.088  Sum_probs=64.2

Q ss_pred             CEEEEeCCCCchHH--HHHHHHHHc----CCeEEEEEcCCcchHHHHHHHHh---hcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           32 LTAIVTGATSGIGT--ETARVLALR----GVHVVMGVRDIAAGKDVKETIVK---EIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        32 k~~lItG~s~giG~--~~a~~l~~~----g~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      -++.|.|| |..|.  ++...++..    +.+++++|.++++++.....+..   .. +....+..  .+|.++   .++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-~~~~~i~~--~td~~e---aL~   75 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEV-GADLKFEK--TMNLDD---VII   75 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHT-TCCCEEEE--ESCHHH---HHT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhc-CCCeEEEE--eCChhh---ccc
Confidence            35778886 55554  454445433    45999999998876544333332   22 12222221  123222   222


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHHHHH---------------H---------HhHHHHHHHHHHHHHHHhh
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQFAT---------------N---------HLGHFLLTNLLLDTMKKTA  158 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~---------------N---------~~~~~~l~~~~~~~~~~~~  158 (216)
                             ..|++|+.++..+      .+.+.+...+               +         ....+-+.+.+.+.+.+. 
T Consensus        76 -------dad~Vv~~~~~g~------~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~-  141 (171)
T d1obba1          76 -------DADFVINTAMVGG------HTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL-  141 (171)
T ss_dssp             -------TCSEEEECCCTTH------HHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH-
T ss_pred             -------CCCeEeeeccccc------ccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHH-
Confidence                   6799999988642      1111111110               1         123555677777777654 


Q ss_pred             ccCCCCcEEEEEcCCccc
Q 027991          159 RKSGGEGRIINVSSEGHR  176 (216)
Q Consensus       159 ~~~~~~g~iv~isS~~~~  176 (216)
                         .+.+.++++|.-...
T Consensus       142 ---~p~a~~i~~TNPvdv  156 (171)
T d1obba1         142 ---SPKAWYLQAANPIFE  156 (171)
T ss_dssp             ---CTTCEEEECSSCHHH
T ss_pred             ---CcCeEEEEECChHHH
Confidence               256788888865443

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.78  E-value=0.085  Score=36.23  Aligned_cols=38  Identities=21%  Similarity=0.111  Sum_probs=30.1

Q ss_pred             CCCEEEEe-CCCCchHHHHHHHHHHcCCeEEEEEcCCcc
Q 027991           30 SGLTAIVT-GATSGIGTETARVLALRGVHVVMGVRDIAA   67 (216)
Q Consensus        30 ~~k~~lIt-G~s~giG~~~a~~l~~~g~~Vi~~~r~~~~   67 (216)
                      .++.++|. .|++.||.++|..|+++|.+|.++.+...-
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            34455554 466899999999999999999999987543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.78  E-value=0.04  Score=38.21  Aligned_cols=35  Identities=20%  Similarity=0.295  Sum_probs=30.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEEcCC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGV--HVVMGVRDI   65 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~--~Vi~~~r~~   65 (216)
                      .||+++|+|| |..|..+|..|.+++.  +|.++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 8999999999999885  788887664

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.68  E-value=0.22  Score=35.24  Aligned_cols=81  Identities=19%  Similarity=0.261  Sum_probs=56.5

Q ss_pred             CCCCCEEE-EeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAI-VTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~l-ItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      ..+|+++| +-.|+|++|.+    .+++|+ .|+.++.+.+..+.+.+.+....-..++.++..|+.+      .+++..
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhc
Confidence            46788888 66666778886    455888 6999999988777776666554334478888888743      344444


Q ss_pred             hhcCCccEEEECC
Q 027991          106 IQHHQLNILINNA  118 (216)
Q Consensus       106 ~~~~~id~li~~A  118 (216)
                      +.....|+++...
T Consensus       109 ~~~~~fDlIflDP  121 (182)
T d2fhpa1         109 EEKLQFDLVLLDP  121 (182)
T ss_dssp             HTTCCEEEEEECC
T ss_pred             ccCCCcceEEech
Confidence            4445789998664

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.62  E-value=0.46  Score=33.08  Aligned_cols=120  Identities=8%  Similarity=-0.007  Sum_probs=61.5

Q ss_pred             EEEEeCC-CCchHHHHHHHHHHcC----CeEEEEEcCCcchH-HHHHHH----HhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           33 TAIVTGA-TSGIGTETARVLALRG----VHVVMGVRDIAAGK-DVKETI----VKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        33 ~~lItG~-s~giG~~~a~~l~~~g----~~Vi~~~r~~~~~~-~~~~~~----~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      ++.|.|| +.|.+..++..+....    .++++.|.+++..+ +..+..    ..++ +..  +.....+|..+   .+ 
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~-~~~--~~~~~~td~~~---al-   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKA-GVP--IEIHLTLDRRR---AL-   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHT-TCC--CEEEEESCHHH---HH-
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhc-CCC--ceeeecCCchh---hc-
Confidence            4666675 4577777766665432    48999999875421 111211    1111 111  12222334322   22 


Q ss_pred             HHHhhcCCccEEEECCccCCCCCCCChHHHHHH--HH----------------HHHhHHHHHHHHHHHHHHHhhccCCCC
Q 027991          103 EYNIQHHQLNILINNAGIMGTPFMLSKDNIELQ--FA----------------TNHLGHFLLTNLLLDTMKKTARKSGGE  164 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~--~~----------------~N~~~~~~l~~~~~~~~~~~~~~~~~~  164 (216)
                            .+-|++|++||....      +.+...  +.                ......+-+.+.+.+.+.+.    .+.
T Consensus        76 ------~gaDvVv~ta~~~~~------~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~----~pd  139 (169)
T d1s6ya1          76 ------DGADFVTTQFRVGGL------EARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL----CPD  139 (169)
T ss_dssp             ------TTCSEEEECCCTTHH------HHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH----CTT
T ss_pred             ------CCCCEEEEccccCCC------CCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhc----CCC
Confidence                  256999999997521      111111  11                11234445666777776654    256


Q ss_pred             cEEEEEcCCcc
Q 027991          165 GRIINVSSEGH  175 (216)
Q Consensus       165 g~iv~isS~~~  175 (216)
                      +.++++|.-..
T Consensus       140 a~~i~vtNPvd  150 (169)
T d1s6ya1         140 AWLINFTNPAG  150 (169)
T ss_dssp             CEEEECSSSHH
T ss_pred             eEEEEeCChHH
Confidence            77888876433

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.54  E-value=0.19  Score=36.60  Aligned_cols=81  Identities=11%  Similarity=0.014  Sum_probs=56.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+||-+|+.+|.-.++.-++...+.+|+.++.+++..+.+.+.+... .-.++.++..|..+..          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~-~~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-GIENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh-cccccccccCchHHcc----------cccc
Confidence            4668998888777666555555555568999999988888777776554 2456777777765411          1224


Q ss_pred             CccEEEECCccC
Q 027991          110 QLNILINNAGIM  121 (216)
Q Consensus       110 ~id~li~~Ag~~  121 (216)
                      .+|.++.+++..
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            789999988763

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.43  E-value=0.051  Score=42.19  Aligned_cols=36  Identities=22%  Similarity=0.183  Sum_probs=31.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      +.|+++|+|| |--|+.+|..|+++|++|.+..++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4689999988 88899999999999999999987654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.41  E-value=0.18  Score=38.65  Aligned_cols=25  Identities=20%  Similarity=0.252  Sum_probs=21.9

Q ss_pred             CCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           40 TSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        40 s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      ||-.|.++|+.+..+|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4678999999999999999998654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.36  E-value=0.056  Score=39.99  Aligned_cols=36  Identities=28%  Similarity=0.154  Sum_probs=31.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ..++|+|+|| |--|+.+|..|+++|.+|++..++.+
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3578999998 88999999999999999999988643

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.24  E-value=0.074  Score=37.24  Aligned_cols=40  Identities=20%  Similarity=0.193  Sum_probs=36.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ...+.||+++|.|- |-+|+.+|+.+...|++|+++..++-
T Consensus        18 ~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          18 DFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             CceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            46689999999998 89999999999999999999988763

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.18  E-value=0.044  Score=41.05  Aligned_cols=32  Identities=25%  Similarity=0.230  Sum_probs=29.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      -|+|+|| |-.|.++|.+|+++|.+|+++++..
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3889988 9999999999999999999998764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.06  E-value=0.066  Score=39.42  Aligned_cols=36  Identities=28%  Similarity=0.312  Sum_probs=32.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      -.+|+++|+|| |--|...|..|+++|++|.+..++.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            46789999998 8899999999999999999998664

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.00  E-value=0.051  Score=41.30  Aligned_cols=36  Identities=25%  Similarity=0.205  Sum_probs=31.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      -+.|+|+|+|| |--|+..|..|+++|++|.+..++.
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35578999998 7889999999999999999998754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.88  E-value=0.29  Score=35.68  Aligned_cols=79  Identities=16%  Similarity=0.095  Sum_probs=58.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +|.+||.+|+++|--.++.-++.  |.+|+.+.++++-.+.+.+.+... .-.++.++..|..+..          ...+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g~~nv~~~~gd~~~g~----------~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-GVKNVHVILGDGSKGF----------PPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-CCceeEEEECccccCC----------cccC
Confidence            46689999999888888877776  567999999976666666655543 3468999999986421          2235


Q ss_pred             CccEEEECCccC
Q 027991          110 QLNILINNAGIM  121 (216)
Q Consensus       110 ~id~li~~Ag~~  121 (216)
                      ..|.++.++++.
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            789999998874

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.79  E-value=0.62  Score=31.93  Aligned_cols=83  Identities=17%  Similarity=0.146  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC---CHHHHHHHHHHHHh
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS---SLASVRNFASEYNI  106 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~~~~~~~~~~~  106 (216)
                      +|+++.|++.+||.|--++..+...|-++--      -.+++.+.+++..|.....-=..|++   +.+...+.++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~------l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT------LEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC------CCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC------CCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            5788888889999999999999999966532      23556666666665322111123433   56667777766544


Q ss_pred             hcCCccEEEECCc
Q 027991          107 QHHQLNILINNAG  119 (216)
Q Consensus       107 ~~~~id~li~~Ag  119 (216)
                       ...+|.++....
T Consensus        76 -d~~vd~v~v~~~   87 (163)
T d2csua3          76 -DPNVDMLIAICV   87 (163)
T ss_dssp             -STTCSEEEEEEE
T ss_pred             -CCCcCEEEEeec
Confidence             357887665433

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.66  E-value=0.44  Score=33.47  Aligned_cols=76  Identities=18%  Similarity=0.096  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~g-iG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++.++|=.|++.| ++.    .++..+.+|+.++.+++.++.+.+.++...-..++.++++|..+          .....
T Consensus        33 ~g~~VLDiGcGsG~~s~----~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTGGVTL----ELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKI   98 (186)
T ss_dssp             TTCEEEEESCTTSHHHH----HHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTS
T ss_pred             CCCEEEEEECCeEcccc----cccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------ccccc
Confidence            5678887777665 443    45566779999999999888888887765323588999988522          12234


Q ss_pred             CCccEEEECCc
Q 027991          109 HQLNILINNAG  119 (216)
Q Consensus       109 ~~id~li~~Ag  119 (216)
                      ..+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57899987754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.62  E-value=0.88  Score=34.97  Aligned_cols=77  Identities=18%  Similarity=0.129  Sum_probs=53.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+|++||-.|++.|+   ++..++++|+ +|+.++.++ .++.+.+.........++.++..|+.+-+          ..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Cc
Confidence            478999999988774   4556677897 788888774 34455555555444567899999987632          11


Q ss_pred             cCCccEEEECCc
Q 027991          108 HHQLNILINNAG  119 (216)
Q Consensus       108 ~~~id~li~~Ag  119 (216)
                      ...+|+++...-
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            247899987643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.57  E-value=0.62  Score=31.62  Aligned_cols=78  Identities=10%  Similarity=0.190  Sum_probs=52.7

Q ss_pred             CCCCCEEEEe-CCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           28 DGSGLTAIVT-GATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        28 ~~~~k~~lIt-G~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +++|+.+|=. .|+|.+|.+    .+.+|+ +|+.++.+.+..+...+.+.......++.+++.|+.+      .++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            4678888844 455566664    456787 7999999988777766666544334568999988543      222   


Q ss_pred             hhcCCccEEEECC
Q 027991          106 IQHHQLNILINNA  118 (216)
Q Consensus       106 ~~~~~id~li~~A  118 (216)
                      ...++.|+++.++
T Consensus        79 ~~~~~fDiIf~DP   91 (152)
T d2esra1          79 CLTGRFDLVFLDP   91 (152)
T ss_dssp             HBCSCEEEEEECC
T ss_pred             ccccccceeEech
Confidence            2335789998864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.54  E-value=0.072  Score=44.58  Aligned_cols=34  Identities=21%  Similarity=0.212  Sum_probs=29.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVR   63 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r   63 (216)
                      +++.+|+|.|+ ||+|.++++-|+..|. ++.++|.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            45678999987 8999999999999996 7888854

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.40  E-value=0.092  Score=36.90  Aligned_cols=64  Identities=17%  Similarity=0.069  Sum_probs=45.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhc-----------CCCeEEEEEccCCCHH
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEI-----------PSAKVDAMELDLSSLA   95 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Dv~~~~   95 (216)
                      .+|.+||..|.+.|   ..+..|+++|++|+.+|.+++.++.+.+......           .+....++.+|+.+..
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            35789999998777   4677889999999999999877766655443211           0233467777777643

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=92.30  E-value=0.47  Score=35.41  Aligned_cols=73  Identities=15%  Similarity=0.120  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+|+++|=.|.++|+-   +..++..|++|+.++.+++..+.+.+.....  +.+..++..|+.+      .     ...
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~------~-----~~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEA------A-----LPF  182 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHH------H-----GGG
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccccc------c-----ccc
Confidence            4788999999988862   3356678999999999999888887766654  4556677766421      1     123


Q ss_pred             CCccEEEEC
Q 027991          109 HQLNILINN  117 (216)
Q Consensus       109 ~~id~li~~  117 (216)
                      ++.|+++.|
T Consensus       183 ~~fD~V~an  191 (254)
T d2nxca1         183 GPFDLLVAN  191 (254)
T ss_dssp             CCEEEEEEE
T ss_pred             cccchhhhc
Confidence            578999876

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.28  E-value=0.087  Score=36.14  Aligned_cols=34  Identities=24%  Similarity=0.258  Sum_probs=28.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~   68 (216)
                      +.|.|. |-+|..+++.|+++|++|++.+++..+.
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~   36 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPS   36 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence            556654 9999999999999999999888776543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.28  E-value=0.083  Score=38.15  Aligned_cols=35  Identities=20%  Similarity=0.122  Sum_probs=29.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchH
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGK   69 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~   69 (216)
                      +.|.| .|.+|+.+|..|++.|++|+..|.++++.+
T Consensus         3 I~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~   37 (202)
T d1mv8a2           3 ISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKID   37 (202)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            56664 599999999999999999999998865543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.19  E-value=0.18  Score=31.93  Aligned_cols=71  Identities=14%  Similarity=0.156  Sum_probs=45.5

Q ss_pred             CCCEEEEeCCCCchH-HHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIG-TETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG-~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +.|++.+.|- +|+| .++|+.|.++|++|...|+....   ..+.+.+.  +..  +...+-.  +.+           
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~---~~~~L~~~--Gi~--v~~g~~~--~~i-----------   65 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGV---VTQRLAQA--GAK--IYIGHAE--EHI-----------   65 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSH---HHHHHHHT--TCE--EEESCCG--GGG-----------
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCCh---hhhHHHHC--CCe--EEECCcc--ccC-----------
Confidence            3467888887 5666 66799999999999999987543   22333333  332  2222221  111           


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                      ...|.+|...++.
T Consensus        66 ~~~d~vV~S~AI~   78 (96)
T d1p3da1          66 EGASVVVVSSAIK   78 (96)
T ss_dssp             TTCSEEEECTTSC
T ss_pred             CCCCEEEECCCcC
Confidence            2579999998884

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.12  E-value=0.2  Score=36.78  Aligned_cols=76  Identities=13%  Similarity=0.050  Sum_probs=55.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ...+++|=.|++.|   .++..|+++|++|+.++.+++-++.+.+.....  +.++.+.+.|+.+-.           ..
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~  103 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FK  103 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CC
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------cc
Confidence            34578999998776   345678889999999999987777766666554  457889999987632           11


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +..|.+++.-+.
T Consensus       104 ~~fD~I~~~~~~  115 (251)
T d1wzna1         104 NEFDAVTMFFST  115 (251)
T ss_dssp             SCEEEEEECSSG
T ss_pred             cccchHhhhhhh
Confidence            368988876443

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.01  E-value=0.38  Score=32.86  Aligned_cols=85  Identities=15%  Similarity=0.053  Sum_probs=54.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCC----CeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPS----AKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      +-+.|- |-+|..+|+.|++.|+.+ +.+|+.++.++..++.......    .....+-..+.+.+.+....+.+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            556666 999999999999888755 5777777666555543221100    1223333456677788888887776666


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      +-.++|.+...
T Consensus        81 ~~~~iid~sT~   91 (156)
T d2cvza2          81 EGTYWVDATSG   91 (156)
T ss_dssp             TTEEEEECSCC
T ss_pred             ccccccccccC
Confidence            65666666554

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.96  E-value=0.078  Score=39.78  Aligned_cols=30  Identities=30%  Similarity=0.371  Sum_probs=27.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      ++|+|| |-.|.++|.+|+++|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788887 899999999999999999999875

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.93  E-value=0.28  Score=35.34  Aligned_cols=72  Identities=25%  Similarity=0.174  Sum_probs=50.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..+++||+||=.|++.|+   ++-.++..|+ +|+.++.+++.++.+.+    .  -.++.++.+|+.+.          
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~----N--~~~~~~~~~D~~~l----------  104 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKR----N--CGGVNFMVADVSEI----------  104 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHH----H--CTTSEEEECCGGGC----------
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHH----c--cccccEEEEehhhc----------
Confidence            356899999999988773   2334666786 69999988765544332    2  24578899998542          


Q ss_pred             HhhcCCccEEEECCc
Q 027991          105 NIQHHQLNILINNAG  119 (216)
Q Consensus       105 ~~~~~~id~li~~Ag  119 (216)
                         .+++|++|.|.=
T Consensus       105 ---~~~fD~Vi~NPP  116 (197)
T d1ne2a_         105 ---SGKYDTWIMNPP  116 (197)
T ss_dssp             ---CCCEEEEEECCC
T ss_pred             ---CCcceEEEeCcc
Confidence               257999998854

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.55  E-value=1  Score=30.20  Aligned_cols=87  Identities=9%  Similarity=0.051  Sum_probs=55.4

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHHcCCeEEEEEcCCcchH--HHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           30 SGLTAIVTGAT---SGIGTETARVLALRGVHVVMGVRDIAAGK--DVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        30 ~~k~~lItG~s---~giG~~~a~~l~~~g~~Vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      +.|.+.|+|+|   +.+|..+.+.|.+.|++|+.+..+.+...  .....+.+ .| ..+..+. =+..++.+.++++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~d-lp-~~iD~v~-i~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLD-IP-DKIEVVD-LFVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-CS-SCCSEEE-ECSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccc-cC-ccceEEE-EEeCHHHHHHHHHHH
Confidence            56899999999   58999999999999999999876643321  00011111 11 1111111 124577888888887


Q ss_pred             HhhcCCccEEEECCccC
Q 027991          105 NIQHHQLNILINNAGIM  121 (216)
Q Consensus       105 ~~~~~~id~li~~Ag~~  121 (216)
                      .+.  ++..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            765  466777777753

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.99  E-value=0.42  Score=34.08  Aligned_cols=75  Identities=15%  Similarity=0.054  Sum_probs=54.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +.+||=.|++.|.   ++..|++.|++|+.+|.+.+.++.+.+.....  +..+..+..|+.+-.          ...+.
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~~  102 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDKT  102 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTTC
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCcC
Confidence            4578999988776   55678889999999999988777777666555  456777888877632          11247


Q ss_pred             ccEEEECCcc
Q 027991          111 LNILINNAGI  120 (216)
Q Consensus       111 id~li~~Ag~  120 (216)
                      .|+++....+
T Consensus       103 fD~I~~~~~l  112 (226)
T d1ve3a1         103 FDYVIFIDSI  112 (226)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEecch
Confidence            8999877554

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.87  E-value=0.12  Score=39.28  Aligned_cols=32  Identities=25%  Similarity=0.320  Sum_probs=27.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI   65 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~   65 (216)
                      .|+|+|| |-+|.++|..|+++|. +|.+++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4888888 8999999999999996 699998763

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.87  E-value=0.12  Score=36.96  Aligned_cols=31  Identities=19%  Similarity=0.149  Sum_probs=28.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      |+|+|+ |--|+..|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            888886 8999999999999999999998864

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.86  E-value=0.14  Score=35.64  Aligned_cols=31  Identities=19%  Similarity=0.165  Sum_probs=26.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMG   61 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~   61 (216)
                      +++.++|.|| |.+|.++|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4678999988 999999999999999865444

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.58  E-value=0.15  Score=38.98  Aligned_cols=32  Identities=22%  Similarity=0.191  Sum_probs=23.7

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHcCCeEEEEEcC
Q 027991           32 LTAIVTGATSGIGT-----ETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        32 k~~lItG~s~giG~-----~~a~~l~~~g~~Vi~~~r~   64 (216)
                      |+++|++|+.| |+     +++++|.++|++|.+++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56666665445 66     6899999999999877644

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.08  E-value=0.4  Score=29.76  Aligned_cols=69  Identities=13%  Similarity=0.094  Sum_probs=45.1

Q ss_pred             CEEEEeCCCCchHH-HHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           32 LTAIVTGATSGIGT-ETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        32 k~~lItG~s~giG~-~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      .++-++|- +|+|- ++|+.|.++|+.|...|+....   ..+.|.+.  +-++. ..-|..+              ...
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~--Gi~i~-~gh~~~~--------------i~~   60 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKL--GIPIF-VPHSADN--------------WYD   60 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHT--TCCEE-SSCCTTS--------------CCC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHC--CCeEE-eeecccc--------------cCC
Confidence            34667766 67776 7899999999999999988543   33345544  43332 1122222              136


Q ss_pred             ccEEEECCccC
Q 027991          111 LNILINNAGIM  121 (216)
Q Consensus       111 id~li~~Ag~~  121 (216)
                      .|.+|...++.
T Consensus        61 ~d~vV~SsAI~   71 (89)
T d1j6ua1          61 PDLVIKTPAVR   71 (89)
T ss_dssp             CSEEEECTTCC
T ss_pred             CCEEEEecCcC
Confidence            89999999984

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.07  E-value=0.21  Score=32.47  Aligned_cols=35  Identities=26%  Similarity=0.261  Sum_probs=28.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH---cCCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLAL---RGVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~---~g~~Vi~~~r~~~   66 (216)
                      .|.++|.|| |.+|.++|..|.+   .|.+|.++.|...
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            478999998 9999999987665   4889999988754

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.93  E-value=0.13  Score=33.02  Aligned_cols=40  Identities=15%  Similarity=0.028  Sum_probs=32.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ..+++||+|+|.|+ |-=|..+|..|+..+.++++..|+..
T Consensus        27 ~~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          27 PELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            34688999999998 68889999999988888777776654

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.69  E-value=0.71  Score=33.60  Aligned_cols=82  Identities=18%  Similarity=0.040  Sum_probs=60.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcC----CCeEEEEEccCCCHHHHHHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIP----SAKVDAMELDLSSLASVRNFASEYN  105 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (216)
                      +|.+||-.|.++|.-.++.-++.....+|+.++++++-.+.+.+.+.....    ..++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            467999999999988888777877777999999998888777777765421    245777777865311          


Q ss_pred             hhcCCccEEEECCccC
Q 027991          106 IQHHQLNILINNAGIM  121 (216)
Q Consensus       106 ~~~~~id~li~~Ag~~  121 (216)
                      ...+..|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1234789999998874

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.68  E-value=0.18  Score=36.86  Aligned_cols=80  Identities=13%  Similarity=0.066  Sum_probs=52.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhh----------------cCCCeEEEEEccCC
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKE----------------IPSAKVDAMELDLS   92 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~~Dv~   92 (216)
                      ..+++||..|.+.|   ..+..|+++|++|+.+|-++..++.+.++....                ..+.++.++.+|+.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            36779999998776   457888999999999999977665544433211                01346778888876


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEECCcc
Q 027991           93 SLASVRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      +...         ...+..|+++.....
T Consensus       121 ~l~~---------~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         121 DLPR---------TNIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGGG---------SCCCCEEEEEESSST
T ss_pred             hccc---------cccCceeEEEEEEEE
Confidence            4321         122456776655444

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.65  E-value=0.24  Score=36.85  Aligned_cols=35  Identities=26%  Similarity=0.213  Sum_probs=31.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV   62 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~   62 (216)
                      .+++||+++|-| -|..|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            368999999997 59999999999999999988665

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.41  E-value=0.31  Score=33.47  Aligned_cols=35  Identities=23%  Similarity=0.140  Sum_probs=28.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEEcCC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVH-VVMGVRDI   65 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~-Vi~~~r~~   65 (216)
                      .+++++|.|| |..|...|..+.++|++ |.++.|..
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3566888877 89999999999999985 77777764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.36  E-value=0.25  Score=37.11  Aligned_cols=35  Identities=23%  Similarity=0.137  Sum_probs=31.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV   62 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~   62 (216)
                      .+++|+++.|-| .|..|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468899999998 59999999999999999987663

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=89.30  E-value=1.1  Score=32.43  Aligned_cols=69  Identities=16%  Similarity=0.256  Sum_probs=54.7

Q ss_pred             HHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEECCcc
Q 027991           49 RVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        49 ~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      +.=..+|.+|+.+...-+..++..+.+...+|+.++.+++..+++ ++.++....+.+  |.+|+||.+.=+
T Consensus        25 ~~El~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~-~eke~im~~F~~--g~~~ILv~TtvI   93 (211)
T d2eyqa5          25 LREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRE-RELERVMNDFHH--QRFNVLVCTTII   93 (211)
T ss_dssp             HHHHTTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCH-HHHHHHHHHHHT--TSCCEEEESSTT
T ss_pred             HHHHHcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCH-HHHHHHHHHHHc--CCcceEEEehhh
Confidence            333567999999999988899999999999999999999998865 455555555543  589999998643

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=89.26  E-value=2.1  Score=29.13  Aligned_cols=44  Identities=20%  Similarity=0.204  Sum_probs=30.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEE--cCCcchHHHHHHH
Q 027991           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGV--RDIAAGKDVKETI   75 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~--r~~~~~~~~~~~~   75 (216)
                      |++.|.|.||.||......+.+.-  ++|+...  ++.+.+.++..++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            579999999999999999888763  6766664  3334444444433

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.19  E-value=0.2  Score=32.67  Aligned_cols=35  Identities=17%  Similarity=0.123  Sum_probs=27.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc---CCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLALR---GVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~---g~~Vi~~~r~~~   66 (216)
                      ++.++|.|| |.+|.++|..|.+.   |.+|.++.+...
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            478999998 99999999776654   457999887654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.18  E-value=0.24  Score=37.04  Aligned_cols=33  Identities=24%  Similarity=0.222  Sum_probs=28.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      .++|+|+|| |-=|+..|..|.++|++|.+...+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            456999988 888999999999999999998543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.14  E-value=0.34  Score=37.09  Aligned_cols=36  Identities=22%  Similarity=0.112  Sum_probs=32.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEE
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGV   62 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~   62 (216)
                      ...++||+++|-|- |..|..+|+.|.+.|++|+.++
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            34689999999987 8999999999999999988775

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=88.36  E-value=0.82  Score=33.37  Aligned_cols=76  Identities=12%  Similarity=-0.058  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.++|-+|.++|.-.+   .|+..+.+|+.++++++..+.+.+.+. .  ..++.++..|..+..          ...+
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~--~~nv~~~~~d~~~g~----------~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-Y--YNNIKLILGDGTLGY----------EEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-T--CSSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-c--ccccccccCchhhcc----------hhhh
Confidence            46689999988885444   455556799999988776655544332 2  357888888875411          1225


Q ss_pred             CccEEEECCccC
Q 027991          110 QLNILINNAGIM  121 (216)
Q Consensus       110 ~id~li~~Ag~~  121 (216)
                      +.|.+|.+++..
T Consensus       134 pfD~Iiv~~a~~  145 (224)
T d1vbfa_         134 PYDRVVVWATAP  145 (224)
T ss_dssp             CEEEEEESSBBS
T ss_pred             hHHHHHhhcchh
Confidence            789999988863

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.35  E-value=0.2  Score=37.53  Aligned_cols=33  Identities=21%  Similarity=0.265  Sum_probs=29.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .|+|+|| |--|+.+|..|.++|.+|.++.+..+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4899988 69999999999999999999988753

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=87.88  E-value=0.85  Score=31.62  Aligned_cols=78  Identities=15%  Similarity=0.161  Sum_probs=46.7

Q ss_pred             CCCCEEE-EeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhh
Q 027991           29 GSGLTAI-VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQ  107 (216)
Q Consensus        29 ~~~k~~l-ItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (216)
                      .+|+++| +-.|+|.+|.    +.+.+|++|+.++.+.+..+.+.+.++..  +....+...|.   +.   ........
T Consensus        40 ~~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~--~~~~~v~~~~~---d~---~~~~~~~~  107 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRT--GLGARVVALPV---EV---FLPEAKAQ  107 (171)
T ss_dssp             TTCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHH--TCCCEEECSCH---HH---HHHHHHHT
T ss_pred             cCCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhh--ccccceeeeeh---hc---cccccccc
Confidence            3577777 5555556664    45567999999999988887777766654  22222332222   22   22223333


Q ss_pred             cCCccEEEECC
Q 027991          108 HHQLNILINNA  118 (216)
Q Consensus       108 ~~~id~li~~A  118 (216)
                      ....|+++.+.
T Consensus       108 ~~~fD~If~DP  118 (171)
T d1ws6a1         108 GERFTVAFMAP  118 (171)
T ss_dssp             TCCEEEEEECC
T ss_pred             CCccceeEEcc
Confidence            45789998774

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.87  E-value=0.28  Score=35.78  Aligned_cols=32  Identities=25%  Similarity=0.196  Sum_probs=28.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      ++|+|| |--|+..|..|+++|.+|+++.++..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            788888 78899999999999999999987754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.82  E-value=1.3  Score=30.99  Aligned_cols=77  Identities=14%  Similarity=0.152  Sum_probs=53.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      +.+.++|=.|++.|.   .+..|+++|++|+.++.+++.++.+.+..... .-..+.+...|+.+..-           .
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~d~~~~~~-----------~   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE-GLDNLQTDLVDLNTLTF-----------D   93 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCTTEEEEECCTTTCCC-----------C
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc-cccchhhhheecccccc-----------c
Confidence            455689988885443   55677889999999999988777665555433 12457788888776431           1


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +..|+++.+.-.
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            368999876654

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=87.72  E-value=2.3  Score=27.25  Aligned_cols=81  Identities=11%  Similarity=0.255  Sum_probs=52.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +|++||+--...+-..+.+.|...|++|......    +++.+.+....  ..+.++-..+-+.+.+ ++++++.+....
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g----~eal~~~~~~~--~dlillD~~mP~~~G~-el~~~lr~~~~~   73 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANG----LQALDIVTKER--PDLVLLDMKIPGMDGI-EILKRMKVIDEN   73 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSH----HHHHHHHHHHC--CSEEEEESCCTTCCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCH----HHHHHHHHhCC--CCEEEEeccCCCCCHH-HHHHHHHHhCCC
Confidence            5789999999999999999999999998864433    34444555542  3444444433344433 456666666666


Q ss_pred             ccEEEECC
Q 027991          111 LNILINNA  118 (216)
Q Consensus       111 id~li~~A  118 (216)
                      +-+++.++
T Consensus        74 ~pvi~lt~   81 (119)
T d1peya_          74 IRVIIMTA   81 (119)
T ss_dssp             CEEEEEES
T ss_pred             CcEEEEec
Confidence            77777654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.58  E-value=0.28  Score=37.10  Aligned_cols=30  Identities=23%  Similarity=0.396  Sum_probs=27.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      |+|+|+ |..|...|..++++|.+|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            899987 899999999999999999999764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.36  E-value=1.1  Score=31.91  Aligned_cols=76  Identities=13%  Similarity=0.025  Sum_probs=52.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHHQ  110 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~  110 (216)
                      +++||=.|++.|.-   +..++++|.+|+.++.+++..+.+.+.+... ...++.++..|..+..          -..+.
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~-~~~~i~~~~~d~~~l~----------~~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN-GHQQVEYVQGDAEQMP----------FTDER   81 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEECCC-CCC----------SCTTC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc-cccccccccccccccc----------ccccc
Confidence            46899888877743   3567788999999999987766665554443 3467889999887632          01247


Q ss_pred             ccEEEECCcc
Q 027991          111 LNILINNAGI  120 (216)
Q Consensus       111 id~li~~Ag~  120 (216)
                      .|+++.+..+
T Consensus        82 fD~v~~~~~l   91 (231)
T d1vl5a_          82 FHIVTCRIAA   91 (231)
T ss_dssp             EEEEEEESCG
T ss_pred             cccccccccc
Confidence            8988877665

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.29  E-value=0.2  Score=35.73  Aligned_cols=31  Identities=16%  Similarity=0.139  Sum_probs=27.0

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHcCCeEEEEE
Q 027991           32 LTAIVTGATSGIGTE-----TARVLALRGVHVVMGV   62 (216)
Q Consensus        32 k~~lItG~s~giG~~-----~a~~l~~~g~~Vi~~~   62 (216)
                      |+.+|||.+.|.|+.     +|..|+++|.+|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999998898875     6788999999999986

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.00  E-value=0.25  Score=36.41  Aligned_cols=32  Identities=25%  Similarity=0.243  Sum_probs=28.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      .|+|+|| |--|+..|..|+++|++|.+..++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4789988 8899999999999999999997753

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.92  E-value=0.57  Score=33.85  Aligned_cols=40  Identities=35%  Similarity=0.454  Sum_probs=33.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHH--------------------HcCC-eEEEEEcCCc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLA--------------------LRGV-HVVMGVRDIA   66 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~--------------------~~g~-~Vi~~~r~~~   66 (216)
                      ..++.+|.|+|.|+ |..+..+|+.++                    +.|+ +|.+++|+..
T Consensus        34 ~~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~   94 (216)
T d1lqta1          34 SPDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP   94 (216)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred             CccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECCh
Confidence            35577899999998 899999999887                    5776 6999998753

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.61  E-value=0.71  Score=32.42  Aligned_cols=32  Identities=25%  Similarity=0.179  Sum_probs=26.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRD   64 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~   64 (216)
                      +|.|.||||-.|..+.+.|..+-. ++..+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            589999999999999999998764 66555433

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.58  E-value=0.3  Score=37.15  Aligned_cols=33  Identities=18%  Similarity=0.133  Sum_probs=28.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      -++|+|| |--|+.+|..|+++|.+|.+..++..
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            4788887 89999999999999999999977643

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=86.23  E-value=0.75  Score=34.72  Aligned_cols=78  Identities=13%  Similarity=0.078  Sum_probs=54.2

Q ss_pred             CCCEEEEeC-CCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTG-ATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG-~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      ++.++|=.| |||-||.++++.+  ...+|+.++.+.+.++.+.+...... -.++.+++.|+.+.-           ..
T Consensus       108 ~~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v~~~~~d~~~~~-----------~~  173 (274)
T d2b3ta1         108 QPCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNIHILQSDWFSAL-----------AG  173 (274)
T ss_dssp             SCCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSEEEECCSTTGGG-----------TT
T ss_pred             cccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccceeeeccccccc-----------CC
Confidence            344566555 4567777777754  34699999999888877777665542 246999999987641           11


Q ss_pred             CCccEEEECCccC
Q 027991          109 HQLNILINNAGIM  121 (216)
Q Consensus       109 ~~id~li~~Ag~~  121 (216)
                      .++|++|.|.=+.
T Consensus       174 ~~fDlIvsNPPYi  186 (274)
T d2b3ta1         174 QQFAMIVSNPPYI  186 (274)
T ss_dssp             CCEEEEEECCCCB
T ss_pred             CceeEEEecchhh
Confidence            4799999996654

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=85.78  E-value=1.4  Score=32.71  Aligned_cols=77  Identities=16%  Similarity=0.233  Sum_probs=56.7

Q ss_pred             CCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSG-IGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~g-iG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .|.+||=.|+++| +...+++.+...| +|+.++++++.++.+.+.+.......++.+...|+.+.-           ..
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~g-~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-----------~~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-----------SD  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-----------CS
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-----------cc
Confidence            4678998887765 5677777765544 899999999888888888876544568899999987631           01


Q ss_pred             CCccEEEECC
Q 027991          109 HQLNILINNA  118 (216)
Q Consensus       109 ~~id~li~~A  118 (216)
                      ..+|.++.+.
T Consensus       153 ~~fD~V~ld~  162 (250)
T d1yb2a1         153 QMYDAVIADI  162 (250)
T ss_dssp             CCEEEEEECC
T ss_pred             ceeeeeeecC
Confidence            3689888653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=85.77  E-value=0.36  Score=34.50  Aligned_cols=32  Identities=25%  Similarity=0.298  Sum_probs=26.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDI   65 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~   65 (216)
                      .|+|+|| |--|+..|..|.++|. +|.+..++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            3788887 8889999999999996 699987653

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.63  E-value=1.2  Score=32.28  Aligned_cols=82  Identities=16%  Similarity=0.070  Sum_probs=56.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHH-HcC----CeEEEEEcCCcchHHHHHHHHhh----cCCCeEEEEEccCCCHHHHHHH
Q 027991           30 SGLTAIVTGATSGIGTETARVLA-LRG----VHVVMGVRDIAAGKDVKETIVKE----IPSAKVDAMELDLSSLASVRNF  100 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~-~~g----~~Vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~~~~~  100 (216)
                      ++.+||.+|..+|.-.++.-+++ ..|    .+|+.+++.++-.+.+.+.+...    ....++.++..|..+..     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            46799999999887777777665 444    48999999876655554443221    11246888888876421     


Q ss_pred             HHHHHhhcCCccEEEECCccC
Q 027991          101 ASEYNIQHHQLNILINNAGIM  121 (216)
Q Consensus       101 ~~~~~~~~~~id~li~~Ag~~  121 (216)
                           ...+..|.++.+++..
T Consensus       155 -----~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             -----GGGCSEEEEEECSCBS
T ss_pred             -----ccccceeeEEEEeech
Confidence                 2235789999998874

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.62  E-value=1.1  Score=29.12  Aligned_cols=82  Identities=17%  Similarity=0.162  Sum_probs=52.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCC--CHHHHHHHHHHHHh
Q 027991           29 GSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLS--SLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~~~~~~~~~~~  106 (216)
                      |+..++||+--...+...+.+.|-..|++|......    +++.+.+...    +...+-+|+.  +.+.+ ++++++.+
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~----~~a~~~l~~~----~~dlii~D~~mp~~~G~-el~~~l~~   71 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENG----NEVLAALASK----TPDVLLSDIRMPGMDGL-ALLKQIKQ   71 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSS----HHHHHHHTTC----CCSEEEECCSSSSSTTH-HHHHHHHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCH----HHHHHHHHhC----CCCEEEehhhcCCchHH-HHHHHHHH
Confidence            345689999999999999999999999998865433    2334444332    3445556655  33332 35666666


Q ss_pred             hcCCccEEEECCc
Q 027991          107 QHHQLNILINNAG  119 (216)
Q Consensus       107 ~~~~id~li~~Ag  119 (216)
                      .+..+-+++.++-
T Consensus        72 ~~~~~piI~~t~~   84 (123)
T d1krwa_          72 RHPMLPVIIMTAH   84 (123)
T ss_dssp             HSSSCCEEESCCC
T ss_pred             hCCCCeEEEEecC
Confidence            6666666665543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=85.58  E-value=1.9  Score=29.55  Aligned_cols=83  Identities=14%  Similarity=0.182  Sum_probs=53.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CeEEEE-EcCCcc-h-HHHHH-------------HHHhhcCCCeEEEEEccCCCHH
Q 027991           33 TAIVTGATSGIGTETARVLALRG-VHVVMG-VRDIAA-G-KDVKE-------------TIVKEIPSAKVDAMELDLSSLA   95 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g-~~Vi~~-~r~~~~-~-~~~~~-------------~~~~~~~~~~~~~~~~Dv~~~~   95 (216)
                      ++.|.|++|-.|.++++...+.. .+++.. +|.... . ++..+             .+...  -.... +-.|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~--~~~~D-ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAV--KDDFD-VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTT--TTSCS-EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHH--hcccc-eEEEeccHH
Confidence            69999999999999999998864 454333 332211 0 00000             00000  01111 447999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEECCcc
Q 027991           96 SVRNFASEYNIQHHQLNILINNAGI  120 (216)
Q Consensus        96 ~~~~~~~~~~~~~~~id~li~~Ag~  120 (216)
                      ...+.++.+.+.  ++.+++-+.|.
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCC
Confidence            999999887664  68899999997

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.54  E-value=0.6  Score=31.09  Aligned_cols=35  Identities=20%  Similarity=0.216  Sum_probs=28.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH----HcCCeEEEEEcCCc
Q 027991           31 GLTAIVTGATSGIGTETARVLA----LRGVHVVMGVRDIA   66 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~----~~g~~Vi~~~r~~~   66 (216)
                      .|+++|.|| |.+|.++|..|.    +.|.+|.++.+...
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            578999987 899999998885    46889999877653

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.37  E-value=0.86  Score=33.08  Aligned_cols=40  Identities=28%  Similarity=0.220  Sum_probs=32.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHc--------------------CC-eEEEEEcCCc
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALR--------------------GV-HVVMGVRDIA   66 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~--------------------g~-~Vi~~~r~~~   66 (216)
                      ..++.+|.|+|.|+ |..+..+|+.+++.                    |+ +|.+++|+..
T Consensus        34 ~~~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~   94 (225)
T d1cjca1          34 APDLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP   94 (225)
T ss_dssp             CCCTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred             CccccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence            35577999999988 99999999999873                    65 7888888753

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.99  E-value=0.48  Score=34.77  Aligned_cols=35  Identities=29%  Similarity=0.228  Sum_probs=30.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcch
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAG   68 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~   68 (216)
                      -++|+|| |.-|+..|..++++|.+|.++.++..-.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G   40 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIG   40 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence            3888988 8889999999999999999999886543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.97  E-value=0.48  Score=35.74  Aligned_cols=31  Identities=26%  Similarity=0.295  Sum_probs=26.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      |+|+|| |--|+..|..|+++|++|.+..++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            678887 7889999999999999999997643

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.96  E-value=4.1  Score=27.60  Aligned_cols=75  Identities=16%  Similarity=0.011  Sum_probs=39.8

Q ss_pred             EEEEeCCCCchHHHHHHH-HHH-c----CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           33 TAIVTGATSGIGTETARV-LAL-R----GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~-l~~-~----g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      ++.|.||++ .|...+-. ++. .    +.+|++.|.++++++...+ +............. - ++.+   +.+     
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d-~~~~~~~~~~~~~~-t-~~~~---~~l-----   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD-FVKRLVKDRFKVLI-S-DTFE---GAV-----   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH-HHHHHHTTSSEEEE-C-SSHH---HHH-----
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHH-HHHhhhccCceEEE-e-cCcc---ccc-----
Confidence            467888744 45444432 221 1    3589999999887765433 32221122222221 1 2222   112     


Q ss_pred             hcCCccEEEECCccC
Q 027991          107 QHHQLNILINNAGIM  121 (216)
Q Consensus       107 ~~~~id~li~~Ag~~  121 (216)
                        ..-|++|..+|..
T Consensus        70 --~~aDvVVita~~~   82 (162)
T d1up7a1          70 --VDAKYVIFQFRPG   82 (162)
T ss_dssp             --TTCSEEEECCCTT
T ss_pred             --CCCCEEEEecccC
Confidence              2679999999974

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.58  E-value=0.89  Score=29.47  Aligned_cols=84  Identities=17%  Similarity=0.145  Sum_probs=49.5

Q ss_pred             CEEEEeCCC---CchHHHHHHHHHHcCCeEEEEEcCCcchHH--HHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           32 LTAIVTGAT---SGIGTETARVLALRGVHVVMGVRDIAAGKD--VKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        32 k~~lItG~s---~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      |.+.|.|+|   +..|..+.+.|.+.|++|+.+..+.+....  ....+. +.|. .+... .=+..++.+.++++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~-~lp~-~~D~v-vi~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVR-ELPK-DVDVI-VFVVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGG-GSCT-TCCEE-EECSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccch-hccc-cceEE-EEEeCHHHHHHHHHHHHh
Confidence            678999998   579999999999999999988755433210  000010 1111 11111 112356677777777665


Q ss_pred             hcCCccEEEECCcc
Q 027991          107 QHHQLNILINNAGI  120 (216)
Q Consensus       107 ~~~~id~li~~Ag~  120 (216)
                      .  ++..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            3  35556555553

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=84.43  E-value=0.29  Score=34.36  Aligned_cols=34  Identities=15%  Similarity=0.053  Sum_probs=29.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ++.++|+|| |-.|+..|..+++.|.+|+++++..
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            467999988 8899999999999999999997654

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=84.32  E-value=2.9  Score=32.70  Aligned_cols=86  Identities=15%  Similarity=0.125  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC-c-chHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHH
Q 027991           27 IDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI-A-AGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEY  104 (216)
Q Consensus        27 ~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~-~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (216)
                      ..++|-+||=.+ ...-|...++.|++.||+||=+.+.. . ............  +.+-.-+.+|+.+++..+.+. ++
T Consensus         7 gPL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~--n~~K~si~ldl~~~~G~~~~~-~L   82 (402)
T d1xk7a1           7 GPLAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLS--RRNLHALSLNIFKDEGREAFL-KL   82 (402)
T ss_dssp             STTTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHH--TTTCEEEEECTTSHHHHHHHH-HH
T ss_pred             cCCCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHh--CCCCeEEEEeCcCHHHHHHHH-HH
Confidence            457787777443 24458999999999999999997543 1 111000011111  333457889999988865444 33


Q ss_pred             HhhcCCccEEEECCc
Q 027991          105 NIQHHQLNILINNAG  119 (216)
Q Consensus       105 ~~~~~~id~li~~Ag  119 (216)
                      .   ...|++|.|-.
T Consensus        83 v---~~aDv~i~n~r   94 (402)
T d1xk7a1          83 M---ETTDIFIEASK   94 (402)
T ss_dssp             H---TTCSEEEEECS
T ss_pred             H---hhcCCceeeec
Confidence            3   36799998743

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.91  E-value=0.89  Score=32.39  Aligned_cols=39  Identities=21%  Similarity=0.203  Sum_probs=32.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           26 GIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        26 ~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ..+++||+|+|+|+ |-=|..+|..++..+++++...|+.
T Consensus        27 ~~~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          27 PVDFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCCEEEEECC-CccHHHHHHHHHhhhcccccccccc
Confidence            35689999999988 4558999999999999888877664

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=83.87  E-value=0.6  Score=34.68  Aligned_cols=38  Identities=29%  Similarity=0.257  Sum_probs=31.3

Q ss_pred             CCCCEEEEeCCCCchHHHH-----HHHHHHcCCeEEEEEcCCc
Q 027991           29 GSGLTAIVTGATSGIGTET-----ARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        29 ~~~k~~lItG~s~giG~~~-----a~~l~~~g~~Vi~~~r~~~   66 (216)
                      -.+++++|+.|=||.|+..     |..|+++|.+|.++|-...
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3466777887799999986     7899999999999988754

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.44  E-value=0.81  Score=33.36  Aligned_cols=33  Identities=21%  Similarity=0.215  Sum_probs=28.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEEcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGV-HVVMGVRDIA   66 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~   66 (216)
                      .|+|+|| |--|+.+|..|.++|. +|.+..++.+
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            5889988 7889999999999995 8888887653

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.31  E-value=0.52  Score=35.90  Aligned_cols=30  Identities=20%  Similarity=0.381  Sum_probs=27.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      |+|+|+ |.-|...|..++++|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            888887 888999999999999999999765

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.13  E-value=0.62  Score=35.45  Aligned_cols=33  Identities=21%  Similarity=0.013  Sum_probs=29.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .|+|+|| |--|+.+|..|.++|.+|.+..++.+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            4899998 88899999999999999999987654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=82.94  E-value=3.7  Score=27.05  Aligned_cols=86  Identities=16%  Similarity=0.172  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHHcCCeEEEEEcCCc--chH--HHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHH
Q 027991           30 SGLTAIVTGAT---SGIGTETARVLALRGVHVVMGVRDIA--AGK--DVKETIVKEIPSAKVDAMELDLSSLASVRNFAS  102 (216)
Q Consensus        30 ~~k~~lItG~s---~giG~~~a~~l~~~g~~Vi~~~r~~~--~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (216)
                      +.|.+.|+|+|   +..|..+.+.|.+.|++++.+..+..  ...  .....+.+ .| ..+..+.. +..++.+.++++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~-i~-~~iD~v~v-~~p~~~v~~~v~   88 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLD-LK-EPVDILDV-FRPPSALMDHLP   88 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGG-CC-SCCSEEEE-CSCHHHHTTTHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhh-cc-CCCceEEE-eccHHHHHHHHH
Confidence            46889999999   47999999999999999988865431  110  00000000 01 11111111 235667777777


Q ss_pred             HHHhhcCCccEEEECCcc
Q 027991          103 EYNIQHHQLNILINNAGI  120 (216)
Q Consensus       103 ~~~~~~~~id~li~~Ag~  120 (216)
                      ++.+.  ++..++...|.
T Consensus        89 ~~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          89 EVLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHHHH--CCSCEEECTTC
T ss_pred             HHHhh--CCCeEEEecCc
Confidence            76554  34556666664

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.64  E-value=0.74  Score=31.16  Aligned_cols=31  Identities=19%  Similarity=0.244  Sum_probs=25.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      +++|.|| |.+|.++|..|. ++.+|.++.+..
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            5788888 899999999986 577999987643

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.56  E-value=0.94  Score=32.54  Aligned_cols=77  Identities=10%  Similarity=0.097  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+||=.|++.|.-......+...| +|+.++.+++.++.+.+....   ..++..+..|..++......       +.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~---~~ni~~i~~d~~~~~~~~~~-------~~  124 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRE---RNNIIPLLFDASKPWKYSGI-------VE  124 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHH---CSSEEEECSCTTCGGGTTTT-------CC
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhc---cCCceEEEeeccCccccccc-------cc
Confidence            36789999988775444333344445 899999998887777665543   24688888888876553222       23


Q ss_pred             CccEEEEC
Q 027991          110 QLNILINN  117 (216)
Q Consensus       110 ~id~li~~  117 (216)
                      .+|++++.
T Consensus       125 ~vd~v~~~  132 (209)
T d1nt2a_         125 KVDLIYQD  132 (209)
T ss_dssp             CEEEEEEC
T ss_pred             eEEEEEec
Confidence            56777664

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=82.43  E-value=0.73  Score=35.26  Aligned_cols=34  Identities=24%  Similarity=0.151  Sum_probs=27.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEEcCCc
Q 027991           32 LTAIVTGATSGIGTETARVLALRG--VHVVMGVRDIA   66 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g--~~Vi~~~r~~~   66 (216)
                      |+|+|+|| |-=|+.+|..|+++|  .+|++..++..
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            67889988 777889999998877  48999988753

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.35  E-value=0.59  Score=35.56  Aligned_cols=31  Identities=19%  Similarity=0.317  Sum_probs=27.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      -|+|+|+ |..|+..|..++++|.+|+++.+.
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3888887 899999999999999999999764

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.07  E-value=0.78  Score=32.53  Aligned_cols=30  Identities=17%  Similarity=0.158  Sum_probs=27.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcC
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRD   64 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~   64 (216)
                      ++|+|| |..|.+.|..+++.|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            788888 899999999999999999999875

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.93  E-value=1.4  Score=29.76  Aligned_cols=34  Identities=9%  Similarity=-0.006  Sum_probs=25.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC----CeEEEEEcCC
Q 027991           32 LTAIVTGATSGIGTETARVLALRG----VHVVMGVRDI   65 (216)
Q Consensus        32 k~~lItG~s~giG~~~a~~l~~~g----~~Vi~~~r~~   65 (216)
                      |++.|.||||-.|..+.+.|+++.    .++++..++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            468899999999999999887653    3566555543

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=81.92  E-value=2.5  Score=29.36  Aligned_cols=76  Identities=11%  Similarity=0.068  Sum_probs=51.2

Q ss_pred             CCCCEEE-EeCCCCchHHHHHHHHHHcCC-eEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHh
Q 027991           29 GSGLTAI-VTGATSGIGTETARVLALRGV-HVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNI  106 (216)
Q Consensus        29 ~~~k~~l-ItG~s~giG~~~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (216)
                      +.++++| +-.|+|.+|.+    .+++|+ +|+.++.+.+..+.+.+.+... ...+..++..|+.         +.+..
T Consensus        42 ~~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~-~~~~~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATL-KAGNARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HTTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHT-TCCSEEEECSCHH---------HHHSS
T ss_pred             cchhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhc-cccceeeeeeccc---------ccccc
Confidence            5788888 55566677765    455898 6999999988877777766543 2346777777632         22223


Q ss_pred             hcCCccEEEECC
Q 027991          107 QHHQLNILINNA  118 (216)
Q Consensus       107 ~~~~id~li~~A  118 (216)
                      .....|+++...
T Consensus       108 ~~~~fDlIf~DP  119 (183)
T d2fpoa1         108 KGTPHNIVFVDP  119 (183)
T ss_dssp             CCCCEEEEEECC
T ss_pred             cccccCEEEEcC
Confidence            345789999874

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.92  E-value=0.79  Score=32.47  Aligned_cols=31  Identities=16%  Similarity=0.046  Sum_probs=27.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           34 AIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ++|.|| |-.|+..|..+++.|.+|+++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            788988 7889999999999999999998754

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=81.46  E-value=0.089  Score=35.97  Aligned_cols=39  Identities=15%  Similarity=0.072  Sum_probs=26.3

Q ss_pred             EeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHH
Q 027991           36 VTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETI   75 (216)
Q Consensus        36 ItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~   75 (216)
                      +.|. |-+|.++++.|.+.+..+.+.+|+.+++++..++.
T Consensus         4 fIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           4 FVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             EESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             EEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            4554 88999999988664444467889888877766654

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.35  E-value=0.42  Score=33.21  Aligned_cols=28  Identities=18%  Similarity=0.162  Sum_probs=22.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEE
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMG   61 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~   61 (216)
                      .++|.|| |.+|.++|..|.+.|.++.++
T Consensus         5 ~VvIIGg-G~~G~e~A~~l~~~g~~v~i~   32 (183)
T d1d7ya1           5 PVVVLGA-GLASVSFVAELRQAGYQGLIT   32 (183)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCSCEE
T ss_pred             CEEEECc-cHHHHHHHHHHHhcCCceEEE
Confidence            4888886 899999999999999754443

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=81.29  E-value=3  Score=29.77  Aligned_cols=77  Identities=12%  Similarity=-0.011  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      .|.+||=.|++.|.   ++..|++++.+|+.++.+++-++.+.+...... -.++.+++.|+.+.. .         ..+
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~~~~-~---------~~~   81 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAESLP-F---------PDD   81 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTTBCC-S---------CTT
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-ccccccccccccccc-c---------ccc
Confidence            35688988887774   345666778899999999877777666665542 346889999887532 0         124


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      .+|+++.+-.+
T Consensus        82 ~fD~v~~~~~l   92 (234)
T d1xxla_          82 SFDIITCRYAA   92 (234)
T ss_dssp             CEEEEEEESCG
T ss_pred             ccceeeeecee
Confidence            78887765443

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=81.24  E-value=3.2  Score=30.66  Aligned_cols=78  Identities=13%  Similarity=0.077  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhc
Q 027991           30 SGLTAIVTGATSGIGTETARVLALR-GVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQH  108 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  108 (216)
                      .+.++|=.|++.|.   ++..|+++ |++|+.++.++...+.+.+......-..++.+..+|+.+..          -..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~----------~~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------CED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS----------SCT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc----------ccc
Confidence            46789977776542   33344443 78999999988776666665555433457999999987631          112


Q ss_pred             CCccEEEECCcc
Q 027991          109 HQLNILINNAGI  120 (216)
Q Consensus       109 ~~id~li~~Ag~  120 (216)
                      +.+|+++..-..
T Consensus       134 ~sfD~V~~~~~l  145 (282)
T d2o57a1         134 NSYDFIWSQDAF  145 (282)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccchhhccchh
Confidence            578988866544

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.21  E-value=1.1  Score=30.15  Aligned_cols=32  Identities=22%  Similarity=0.281  Sum_probs=25.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC---CeEEEEEcC
Q 027991           33 TAIVTGATSGIGTETARVLALRG---VHVVMGVRD   64 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g---~~Vi~~~r~   64 (216)
                      .|.|.||||-.|.++.+.|.+++   .++.....+
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            58999999999999999998665   366666544

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.18  E-value=1.3  Score=32.69  Aligned_cols=83  Identities=13%  Similarity=0.062  Sum_probs=56.7

Q ss_pred             CEEEEeCCC-CchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHH-hhcC
Q 027991           32 LTAIVTGAT-SGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYN-IQHH  109 (216)
Q Consensus        32 k~~lItG~s-~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-~~~~  109 (216)
                      .++|=.|.+ |-|+..+++++-  +++|+.++.+++.++-+.+......-..++..+..|..+.     +++.+. ...+
T Consensus        63 ~~~LDiGtGsg~I~~~l~~~~~--~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~-----~~~~~~~~~~~  135 (250)
T d2h00a1          63 RRGIDIGTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-----LMDALKEESEI  135 (250)
T ss_dssp             CEEEEESCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-----STTTSTTCCSC
T ss_pred             ceEEEeCCCchHHHHHHHHhCC--CccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh-----hhhhhhhcccC
Confidence            467766654 569999998874  7899999999998888777776654455777777654331     111111 1235


Q ss_pred             CccEEEECCccC
Q 027991          110 QLNILINNAGIM  121 (216)
Q Consensus       110 ~id~li~~Ag~~  121 (216)
                      .+|++|.|.=+.
T Consensus       136 ~fD~ivsNPPY~  147 (250)
T d2h00a1         136 IYDFCMCNPPFF  147 (250)
T ss_dssp             CBSEEEECCCCC
T ss_pred             ceeEEEecCccc
Confidence            799999998664

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.12  E-value=2.3  Score=27.69  Aligned_cols=41  Identities=22%  Similarity=0.111  Sum_probs=33.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCc
Q 027991           25 DGIDGSGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIA   66 (216)
Q Consensus        25 ~~~~~~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~   66 (216)
                      .....++|.++|.|| |--+..-|..|.....+|.++.|..+
T Consensus        21 D~~~~~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          21 DGFFYRNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             HGGGGTTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             chHHhCCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            344468999999999 78888888899888889999998753

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.11  E-value=0.13  Score=37.35  Aligned_cols=25  Identities=36%  Similarity=0.337  Sum_probs=22.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeE
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHV   58 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~V   58 (216)
                      +|+|+|| |-+|+.+|.+|+++|.+|
T Consensus         2 kV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           2 RVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            5889988 999999999999999754

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=81.09  E-value=0.67  Score=35.19  Aligned_cols=32  Identities=25%  Similarity=0.311  Sum_probs=27.4

Q ss_pred             EEEeCCCCchHHHHHHHHH-----HcCCeEEEEEcCCc
Q 027991           34 AIVTGATSGIGTETARVLA-----LRGVHVVMGVRDIA   66 (216)
Q Consensus        34 ~lItG~s~giG~~~a~~l~-----~~g~~Vi~~~r~~~   66 (216)
                      |+|+|| |-.|+.+|..|+     .+|++|.+..+...
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            889988 899999999997     46999999988653

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=81.01  E-value=7.6  Score=28.98  Aligned_cols=29  Identities=10%  Similarity=0.090  Sum_probs=21.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEE
Q 027991           33 TAIVTGATSGIGTETARVLALRGVHVVMG   61 (216)
Q Consensus        33 ~~lItG~s~giG~~~a~~l~~~g~~Vi~~   61 (216)
                      ..+|+..+|.-|.++|..-...|.+++++
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~   98 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKII   98 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEE
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeec
Confidence            35778888888888888777777654444

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=80.84  E-value=2.3  Score=28.81  Aligned_cols=34  Identities=26%  Similarity=0.285  Sum_probs=27.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEEcC
Q 027991           31 GLTAIVTGATSGIGTETARVLALR--GVHVVMGVRD   64 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~--g~~Vi~~~r~   64 (216)
                      .|++.|.|+||.||......+.+.  .++|+...-+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            488999999999999999988765  4677666433

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.82  E-value=0.55  Score=32.97  Aligned_cols=34  Identities=9%  Similarity=-0.027  Sum_probs=29.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCC
Q 027991           31 GLTAIVTGATSGIGTETARVLALRGVHVVMGVRDI   65 (216)
Q Consensus        31 ~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~   65 (216)
                      ++.++|+|| |-.|...|..+++.|.+|+++++..
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            467999988 7899999999999999999887543

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=80.81  E-value=3.6  Score=29.78  Aligned_cols=88  Identities=10%  Similarity=0.023  Sum_probs=57.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEEcCCcchHHHHHHHHhhcCCCeEEEEEccCCCHHHHHHHHHHHHhhcC
Q 027991           30 SGLTAIVTGATSGIGTETARVLALRGVHVVMGVRDIAAGKDVKETIVKEIPSAKVDAMELDLSSLASVRNFASEYNIQHH  109 (216)
Q Consensus        30 ~~k~~lItG~s~giG~~~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~  109 (216)
                      ..|+||=+|..-|......-.-+..+.+|+.+..+++..+.+.+.+....-..++.++..|..+  .+.++.+. ....+
T Consensus        59 ~~k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~--~L~~l~~~-~~~~~  135 (227)
T d1susa1          59 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALP--VLDEMIKD-EKNHG  135 (227)
T ss_dssp             TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHH--HHHHHHHC-GGGTT
T ss_pred             CCCcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHH--HHHHHHhc-cccCC
Confidence            5688999988766554433333345679999999988877777777665444578877776543  34444332 22346


Q ss_pred             CccEEEECCcc
Q 027991          110 QLNILINNAGI  120 (216)
Q Consensus       110 ~id~li~~Ag~  120 (216)
                      .+|.++..|.-
T Consensus       136 ~fD~iFiDa~k  146 (227)
T d1susa1         136 SYDFIFVDADK  146 (227)
T ss_dssp             CBSEEEECSCS
T ss_pred             ceeEEEeccch
Confidence            79999988753

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=80.74  E-value=5.4  Score=29.94  Aligned_cols=32  Identities=19%  Similarity=0.046  Sum_probs=23.1

Q ss_pred             CEEEEeCCCCc---hHHHHHHHHHHcCCeEEEEEc
Q 027991           32 LTAIVTGATSG---IGTETARVLALRGVHVVMGVR   63 (216)
Q Consensus        32 k~~lItG~s~g---iG~~~a~~l~~~g~~Vi~~~r   63 (216)
                      |+++.++||+|   =-.++|++|.++|++|.++..
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            34555666642   345799999999999988763

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.54  E-value=0.8  Score=32.78  Aligned_cols=34  Identities=24%  Similarity=0.282  Sum_probs=28.7

Q ss_pred             CCEEEEeCCCCchHHH-----HHHHHHHcCCeEEEEEcC
Q 027991           31 GLTAIVTGATSGIGTE-----TARVLALRGVHVVMGVRD   64 (216)
Q Consensus        31 ~k~~lItG~s~giG~~-----~a~~l~~~g~~Vi~~~r~   64 (216)
                      +|++.|+|+-||.|+.     +|..|+++|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            5789999999998875     567888999999999854