Query         027996
Match_columns 215
No_of_seqs    112 out of 461
Neff          6.9 
Searched_HMMs 29240
Date          Mon Mar 25 06:59:26 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027996.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027996hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1zxu_A AT5G01750 protein; PFAM 100.0 2.8E-42 9.5E-47  290.0  19.4  189    4-201    22-215 (217)
  2 1zxu_A AT5G01750 protein; PFAM  98.1 4.4E-05 1.5E-09   63.2  12.7   97   18-124    61-161 (217)
  3 3c5n_A Tubby-related protein 1  75.9      33  0.0011   28.5  11.8   88   88-181    30-138 (246)
  4 2fim_A Tubby related protein 1  68.6      53  0.0018   27.7  11.7  105   68-181    36-162 (276)
  5 2v2f_A Penicillin binding prot  44.4      12 0.00042   19.7   1.8   15   61-75      6-20  (26)
  6 4he6_A Peptidase family U32; u  40.6      37  0.0013   23.2   4.3   30   43-75     20-50  (89)
  7 3u88_M Histone-lysine N-methyl  36.6     8.9 0.00031   25.5   0.4   26  175-200    28-53  (75)
  8 2h1z_A Hybrid atracotoxin; bet  26.5      46  0.0016   19.6   2.2   12   40-51     28-39  (39)
  9 4he6_A Peptidase family U32; u  24.0      99  0.0034   20.9   4.2   40   21-72     21-61  (89)
 10 3oe3_A Putative periplasmic pr  23.9 1.3E+02  0.0043   21.4   4.7   37   30-74     48-84  (98)
 11 2ln7_A LPXTG-SITE transpeptida  22.2      17 0.00058   27.5  -0.2   19   33-51     79-97  (147)
 12 2dho_A Isopentenyl-diphosphate  21.6 1.2E+02   0.004   24.4   4.8   58   33-95     26-92  (235)

No 1  
>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A
Probab=100.00  E-value=2.8e-42  Score=289.99  Aligned_cols=189  Identities=28%  Similarity=0.551  Sum_probs=146.0

Q ss_pred             CcceeEeccCccCCcceEEEEEEEeceeeCCCeEEEeCCCCEEEEEEecCCCCCCCCeEEEEcCCCCeEEEEEEeccccc
Q 027996            4 DQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKVQFQL   83 (215)
Q Consensus         4 ~~~~~~v~~~~~~~~~~~l~v~~k~~~~~~d~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~~L~~i~~k~~~~~   83 (215)
                      +++.++|+++||++++++|+||+|.+++.+++|+|+|++|+++|+|+|  +.++++.++.|+|++|++|++|++|     
T Consensus        22 ~~~~~vv~~~~~~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~--~~~~~~~~~~l~D~~G~~l~~i~rk-----   94 (217)
T 1zxu_A           22 QAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRVLLDGSGTPVVTLREK-----   94 (217)
T ss_dssp             --CCCSSCGGGBCSSCEEEEEECC-----CCCEEEEETTSCEEEEEEC--SSTTCCSEEEEECTTSCEEEEEEC------
T ss_pred             CCcEEEECccccCCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEc--cccCCCCEEEEECCCCCEEEEEEcc-----
Confidence            344556669999999999999999777778899999999999999999  6689999999999999999999999     


Q ss_pred             cCccccceeEEEEcCCCCCCceEEEEEeeccc-CCceEEEEEeCC---CCccEEEEeeecCceeEEEeCC-CcEEEEEEe
Q 027996           84 MRPSLHHRWEGYSGERTDGQKPIFSVRRSSII-GRSSVTVEMYEN---PGEEYQIEGNFWQRSCTIFNAM-KESVAEIRR  158 (215)
Q Consensus        84 ~~~s~~~~w~v~~~~~~~~~~~l~~vkk~~~~-~~~~~~V~l~~~---~~~~~~v~G~~~~~~~~I~~~~-g~~VA~V~r  158 (215)
                       .++++++|++|.+++.++++++++||+++.+ ++++++|++.++   +..+|+|+|+|++++|+|++++ |++||+|+|
T Consensus        95 -~~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~~~~~~~~~~~I~G~~~~~~f~I~~~~~~~~Va~I~k  173 (217)
T 1zxu_A           95 -MVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHR  173 (217)
T ss_dssp             ------CEEEEEETTCCCGGGEEEEEEC-------CCEEEEETTCCC-CCCSEEEESCTTTTCCEEEETTTCCEEEEEEE
T ss_pred             -ccccCcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECCCCCCCceEEEEEEeEeCCEEEEEECCCCEEEEEEEe
Confidence             8899999999998765444689999998422 467899988754   2468999999999999999986 799999999


Q ss_pred             eeccccceEeeeceEEEEEeCCCCHHHHHHHHHHhcccccCCC
Q 027996          159 KVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGDNY  201 (215)
Q Consensus       159 k~~~~~~~~~g~dtY~v~V~pgvD~ali~alvv~lD~i~~~~~  201 (215)
                      +| +++++++++|+|.|+|.||+|.+|++|+|++||+++++++
T Consensus       174 k~-~~~~~~~~~D~y~l~V~p~~D~aliialvv~iD~~~~~~~  215 (217)
T 1zxu_A          174 KH-TVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNREDR  215 (217)
T ss_dssp             C---------CBCSEEEEECTTSBHHHHHHHHHHHHHHHC---
T ss_pred             ee-eccccccCCcEEEEEECCCCCHHHHHHHHHHHHHhhhhcc
Confidence            97 6788889999999999999999999999999999998764


No 2  
>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A
Probab=98.11  E-value=4.4e-05  Score=63.16  Aligned_cols=97  Identities=19%  Similarity=0.183  Sum_probs=65.7

Q ss_pred             cceEEEEEEEeceeeCCCeEEEeCCCCEEEEEEecCCCCCCCCeEEEEcCCCC----eEEEEEEeccccccCccccceeE
Q 027996           18 QETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGK----CLLTVRRKVQFQLMRPSLHHRWE   93 (215)
Q Consensus        18 ~~~~l~v~~k~~~~~~d~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~----~L~~i~~k~~~~~~~~s~~~~w~   93 (215)
                      ....|+|..+ .+..++.+.|+|.+|++++++.-  +.+++..+..++++.+.    +|++|+++.     .+++++.|+
T Consensus        61 G~~vf~V~~~-~~~~~~~~~l~D~~G~~l~~i~r--k~~~~~~~~~v~~~~~~~~~~~i~~vrk~~-----~~~~~~~~~  132 (217)
T 1zxu_A           61 GNLLFKVKEP-VFGLHDKRVLLDGSGTPVVTLRE--KMVSMHDRWQVFRGGSTDQRDLLYTVKRSS-----MLQLKTKLD  132 (217)
T ss_dssp             SCEEEEEECS-STTCCSEEEEECTTSCEEEEEEC--------CEEEEEETTCCCGGGEEEEEEC------------CCEE
T ss_pred             CCEEEEEEcc-ccCCCCEEEEECCCCCEEEEEEc--cccccCcEEEEEcCCCCCCCcEEEEEEEec-----cccCCCeEE
Confidence            5678999887 45678889999999999999999  87899999999999875    799999872     467889999


Q ss_pred             EEEcCCCCCCceEEEEEeecccCCceEEEEE
Q 027996           94 GYSGERTDGQKPIFSVRRSSIIGRSSVTVEM  124 (215)
Q Consensus        94 v~~~~~~~~~~~l~~vkk~~~~~~~~~~V~l  124 (215)
                      ++.++.++++.+.++|+-.  +...+++|.-
T Consensus       133 V~~~~~~~~~~~~~~I~G~--~~~~~f~I~~  161 (217)
T 1zxu_A          133 VFLGHNKDEKRCDFRVKGS--WLERSCVVYA  161 (217)
T ss_dssp             EEETTCCC-CCCSEEEESC--TTTTCCEEEE
T ss_pred             EEECCCCCCCceEEEEEEe--EeCCEEEEEE
Confidence            9997644333467777544  2234677754


No 3  
>3c5n_A Tubby-related protein 1; inositol, signalling, alternative splicing, disease mutation, polymorphism, retinitis pigmentosa, sensory transduction; HET: I3P; 1.80A {Homo sapiens} PDB: 1i7e_A* 1c8z_A
Probab=75.94  E-value=33  Score=28.49  Aligned_cols=88  Identities=10%  Similarity=0.152  Sum_probs=52.8

Q ss_pred             ccceeEEEEcCCCCCCceEEEEEeecccCCceEEEEEeCC----CCcc--EEEEeeecCceeEEEeCCC-----------
Q 027996           88 LHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYEN----PGEE--YQIEGNFWQRSCTIFNAMK-----------  150 (215)
Q Consensus        88 ~~~~w~v~~~~~~~~~~~l~~vkk~~~~~~~~~~V~l~~~----~~~~--~~v~G~~~~~~~~I~~~~g-----------  150 (215)
                      +.++|..|..++  .+..|...||+..-..+.+.|++...    .+..  =.++-||++..|+|||. |           
T Consensus        30 ~yp~y~l~~~~~--~~~fLlaark~~~~~~s~YiIS~d~~dlsr~s~~yvGKLrsNf~Gt~F~iyD~-g~~p~~~~s~~~  106 (246)
T 3c5n_A           30 MYPSYFLHLDTE--KKVFLLAGRKRKRSKTANYLISIDPTNLSRGGENFIGKLRSNLLGNRFTVFDN-GQNPQRGYSTNV  106 (246)
T ss_dssp             CCCEEEEEESSS--SCCEEEEEEECTTCSSCEEEEESCTTC------CEEEEEEECSSSSEEEEECS-CBCGGGCTTSCG
T ss_pred             CceEEEEEEeCC--CcEEEEeeeeccCCCCceEEEEeCccccccCCceEEEEEEEccCCCEEEEECC-CCCcccccCccc
Confidence            568898888642  22356666766433345788877532    1122  35678999999999987 4           


Q ss_pred             ----cEEEEEEeeeccccceEeeeceEEEEEeCCC
Q 027996          151 ----ESVAEIRRKVDASTQVLLAKDVFLLSVKPGF  181 (215)
Q Consensus       151 ----~~VA~V~rk~~~~~~~~~g~dtY~v~V~pgv  181 (215)
                          +.+|.|..+. +..+ ..|.-...+.+ |+.
T Consensus       107 ~~~r~el~~v~Ye~-n~l~-~~gPR~m~v~i-P~~  138 (246)
T 3c5n_A          107 ASLRQELAAVIYET-NVLG-FRGPRRMTVII-PGM  138 (246)
T ss_dssp             GGBCCEEEEEEECC-CCCC----CCCEEEEE-ECB
T ss_pred             ccccEEEEEEEEEe-cccC-CCCCeEEEEEe-cCc
Confidence                7899998875 2111 12444555555 544


No 4  
>2fim_A Tubby related protein 1; tubby filled-barrel, beta-barrel, filled-beta-roll, 12-stran barrel, helix-filled-barrel, retinitis pigmentosa; HET: 3DP; 1.90A {Homo sapiens} PDB: 1s31_A*
Probab=68.60  E-value=53  Score=27.72  Aligned_cols=105  Identities=10%  Similarity=0.140  Sum_probs=56.8

Q ss_pred             CCCeEEEEEE-eccccccCccccceeEEEEcCCCCCCceEEEEEeecccCCceEEEEEeCC----CCcc--EEEEeeecC
Q 027996           68 HGKCLLTVRR-KVQFQLMRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYEN----PGEE--YQIEGNFWQ  140 (215)
Q Consensus        68 ~G~~L~~i~~-k~~~~~~~~s~~~~w~v~~~~~~~~~~~l~~vkk~~~~~~~~~~V~l~~~----~~~~--~~v~G~~~~  140 (215)
                      .|..-+.|++ |.++   .-.+.++|..|..+  +.+..|+..||+..-..+.+.|++...    .+..  =.|+-||++
T Consensus        36 ~~~iqC~I~R~k~g~---~~g~yp~y~L~l~~--~~~~fLLaarK~k~~~ts~YiIS~d~~dlsr~s~~yvGKLrSNflG  110 (276)
T 2fim_A           36 GRTVRCRLTRDKKGM---DRGMYPSYFLHLDT--EKKVFLLAGRKRKRSKTANYLISIDPTNLSRGGENFIGKLRSNLLG  110 (276)
T ss_dssp             TCCEEEEEEEEC----------CCEEEEEECS--SSCEEEEEEEECTTCSSCEEEEESCTTC------CEEEEEEECSSS
T ss_pred             CCeEEEEEEEeCCCC---CCCCceEEEEEEeC--CCCEEEEEEEeccCCCCceEEEEecchhcccCCceEEEEEEEccCC
Confidence            3445577755 3210   11356889999864  223456666776543345788876532    1122  346789999


Q ss_pred             ceeEEEeCCC---------------cEEEEEEeeeccccceEeeeceEEEEEeCCC
Q 027996          141 RSCTIFNAMK---------------ESVAEIRRKVDASTQVLLAKDVFLLSVKPGF  181 (215)
Q Consensus       141 ~~~~I~~~~g---------------~~VA~V~rk~~~~~~~~~g~dtY~v~V~pgv  181 (215)
                      ..|+|||. |               +.+|.|..+. +..+ ..|.-...+.+ |+.
T Consensus       111 tkF~iyD~-G~~p~~~~s~~~~~~r~el~~V~Ye~-nvlg-~~gPR~m~v~i-P~~  162 (276)
T 2fim_A          111 NRFTVFDN-GQNPQRGYSTNVASLRQELAAVIYET-NVLG-FRGPRRMTVII-PGM  162 (276)
T ss_dssp             SEEEEECS-SBCGGGCTTSCGGGBCCEEEEEEEC-----------CCEEEEE-ECB
T ss_pred             CEEEEECC-CCCcccccCcccccccEEEEEEEEEe-cccC-CCCCeEEEEEe-cCc
Confidence            99999987 4               7888898775 2111 12344555555 544


No 5  
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=44.44  E-value=12  Score=19.65  Aligned_cols=15  Identities=7%  Similarity=0.217  Sum_probs=11.2

Q ss_pred             eEEEEcCCCCeEEEE
Q 027996           61 EHVLMDAHGKCLLTV   75 (215)
Q Consensus        61 k~~l~D~~G~~L~~i   75 (215)
                      --.|+|.+|+.+.++
T Consensus         6 ss~IYD~~g~~i~~l   20 (26)
T 2v2f_A            6 SSKIYDNKNQLIADL   20 (26)
T ss_pred             CCEEEeCCCCEeeec
Confidence            356888888888776


No 6  
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=40.55  E-value=37  Score=23.15  Aligned_cols=30  Identities=13%  Similarity=0.086  Sum_probs=21.0

Q ss_pred             CCEEEEEEecCCCCCCCCeEEEEcCCC-CeEEEE
Q 027996           43 GELVFRVDSYGPDTRDKDEHVLMDAHG-KCLLTV   75 (215)
Q Consensus        43 G~~vf~V~g~~~~~s~~~k~~l~D~~G-~~L~~i   75 (215)
                      |...+.+++  + |+.++.++++-+.| +.-++|
T Consensus        20 g~~~ie~rN--~-f~~GD~iEi~~P~g~~~~~~v   50 (89)
T 4he6_A           20 GIATVQQRN--H-FRPGDEVEFFGPEIENFTQVI   50 (89)
T ss_dssp             TEEEEEESS--C-BCTTCEEEEESTTSCCEEEEC
T ss_pred             CEEEEEEcC--C-cCCCCEEEEEcCCCCcEEEEe
Confidence            666667777  6 57888888888888 433544


No 7  
>3u88_M Histone-lysine N-methyltransferase MLL; menin, MEN1, MLL, JUND, ledgf, TPR, transcription; HET: CHD 0BR GGB; 3.00A {Homo sapiens}
Probab=36.62  E-value=8.9  Score=25.48  Aligned_cols=26  Identities=27%  Similarity=0.367  Sum_probs=19.3

Q ss_pred             EEEeCCCCHHHHHHHHHHhcccccCC
Q 027996          175 LSVKPGFDGAFAMGLVLVLDQINGDN  200 (215)
Q Consensus       175 v~V~pgvD~ali~alvv~lD~i~~~~  200 (215)
                      |-|.||.|.||-++.+|--..-+..+
T Consensus        28 lgvgpGFDAALqvSa~Ig~nl~kfrd   53 (75)
T 3u88_M           28 LRVGPGFDAALQVSAAIGTNLRRFRA   53 (75)
T ss_dssp             CEECCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HccCcChhHHHHHHHHHHHHHHHHHH
Confidence            56899999999988777655544333


No 8  
>2h1z_A Hybrid atracotoxin; beta-hairpin, cystine knot; NMR {Hadronyche versuta}
Probab=26.48  E-value=46  Score=19.57  Aligned_cols=12  Identities=25%  Similarity=0.398  Sum_probs=10.1

Q ss_pred             eCCCCEEEEEEe
Q 027996           40 NCRGELVFRVDS   51 (215)
Q Consensus        40 D~~G~~vf~V~g   51 (215)
                      ++||+.|+|.+.
T Consensus        28 NeNGntV~rC~~   39 (39)
T 2h1z_A           28 NENGHTVYYCRA   39 (39)
T ss_dssp             CSSCCEEEEEEC
T ss_pred             ccCCCEEEeecC
Confidence            589999999873


No 9  
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=23.99  E-value=99  Score=20.85  Aligned_cols=40  Identities=18%  Similarity=0.219  Sum_probs=27.7

Q ss_pred             EEEEEEEeceeeCCCeEEEeCCC-CEEEEEEecCCCCCCCCeEEEEcCCCCeE
Q 027996           21 HLTVFKTSLFFQNDGFTVYNCRG-ELVFRVDSYGPDTRDKDEHVLMDAHGKCL   72 (215)
Q Consensus        21 ~l~v~~k~~~~~~d~f~V~D~~G-~~vf~V~g~~~~~s~~~k~~l~D~~G~~L   72 (215)
                      ..+|..|.-++-||...|.-..| +.-++|+.            +.|.+|+++
T Consensus        21 ~~~ie~rN~f~~GD~iEi~~P~g~~~~~~v~~------------m~d~~G~~i   61 (89)
T 4he6_A           21 IATVQQRNHFRPGDEVEFFGPEIENFTQVIEK------------IWDEDGNEL   61 (89)
T ss_dssp             EEEEEESSCBCTTCEEEEESTTSCCEEEECCC------------EEETTSCEE
T ss_pred             EEEEEEcCCcCCCCEEEEEcCCCCcEEEEeHH------------eEcCCCCEe
Confidence            45666666677888888888888 66677654            456666655


No 10 
>3oe3_A Putative periplasmic protein; beta barrel, hydrolase inhibitor; 1.51A {Salmonella enterica}
Probab=23.90  E-value=1.3e+02  Score=21.40  Aligned_cols=37  Identities=8%  Similarity=0.126  Sum_probs=24.8

Q ss_pred             eeeCCCeEEEeCCCCEEEEEEecCCCCCCCCeEEEEcCCCCeEEE
Q 027996           30 FFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLT   74 (215)
Q Consensus        30 ~~~~d~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~~L~~   74 (215)
                      +-||-.|.--|.+|..++.-+|        ++..|.|..|+|++.
T Consensus        48 SASGarY~~~~~~~~y~lwtKG--------~eA~L~~~~g~~i~~   84 (98)
T 3oe3_A           48 MASGANYEAIDKNYTYKLYTKG--------KTAELVEGDDKPVLS   84 (98)
T ss_dssp             C--CEEEEESSTTCCCEEEEET--------TEEEEEETTTEEEEE
T ss_pred             ecCcceEEccCCCCcEEEEEeC--------CcEEEEECCCCEEEc
Confidence            4466667666666666776666        468888888888864


No 11 
>2ln7_A LPXTG-SITE transpeptidase family protein; sortase, sortase family D, enzyme, protein binding; NMR {Bacillus anthracis}
Probab=22.20  E-value=17  Score=27.50  Aligned_cols=19  Identities=5%  Similarity=0.170  Sum_probs=8.8

Q ss_pred             CCCeEEEeCCCCEEEEEEe
Q 027996           33 NDGFTVYNCRGELVFRVDS   51 (215)
Q Consensus        33 ~d~f~V~D~~G~~vf~V~g   51 (215)
                      ||.+.|++.++...|+|..
T Consensus        79 GD~i~v~~~~~~~~Y~V~~   97 (147)
T 2ln7_A           79 KDTLVLEYDNKTYTYEIQK   97 (147)
T ss_dssp             TCEEEEEETTEEEEEEEEE
T ss_pred             CCEEEEEECCcEEEEEEEe
Confidence            3444444444444444444


No 12 
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=21.65  E-value=1.2e+02  Score=24.42  Aligned_cols=58  Identities=9%  Similarity=0.011  Sum_probs=33.9

Q ss_pred             CCCeEEEeCCCCEEEEEEecC-C--------CCCCCCeEEEEcCCCCeEEEEEEeccccccCccccceeEEE
Q 027996           33 NDGFTVYNCRGELVFRVDSYG-P--------DTRDKDEHVLMDAHGKCLLTVRRKVQFQLMRPSLHHRWEGY   95 (215)
Q Consensus        33 ~d~f~V~D~~G~~vf~V~g~~-~--------~~s~~~k~~l~D~~G~~L~~i~~k~~~~~~~~s~~~~w~v~   95 (215)
                      .+-+.|+|++|+++.++.-.. .        .+...-...+.|.+|+.|++-|...     ..++-..|..-
T Consensus        26 ~E~~~lvd~~~~~~G~~~r~~~h~~~~~~~g~~h~av~v~v~~~~g~lLLq~R~~~-----k~~~pg~W~~p   92 (235)
T 2dho_A           26 AEMCILIDENDNKIGAETKKNCHLNENIEKGLLHRAFSVFLFNTENKLLLQQRSDA-----KITFPGCFTNT   92 (235)
T ss_dssp             CCEEEEECTTCCEEEEEEHHHHTBHHHHTTTCCEEEEEEEEECTTCCEEEEEECTT-----CSSSTTCEESS
T ss_pred             CcEEEEEcCCCCEEEEEEhHHhccccccCCCceEEEEEEEEEcCCCEEEEEEecCc-----CCCCCCcEEec
Confidence            456999999999999984311 0        0111112357898998887533321     12344567743


Done!