BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027999
(215 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7SWD3|GID8_NEMVE Glucose-induced degradation protein 8 homolog OS=Nematostella
vectensis GN=v1g247787 PE=3 SV=1
Length = 225
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 17 DIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELT 76
+++ +++ YLV YKE + F +G QP L+ ++ R +I +G+ +A+ +T
Sbjct: 25 EMNRLIMDYLVTEGYKEAAEKFRIESGT-QPTAPLDSLDDRIKIREAVQKGDLEQAVSMT 83
Query: 77 EELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGK-VQKYVEKLEDF 135
+L D+L+ N+ L+F L +EL+ + A+EFAQ + + G+ +Y+E+LE
Sbjct: 84 NKLNPDILDSNQQLYFHLQQQRLIELIREKDIEAAVEFAQGQFSEQGQESGRYLEELEQT 143
Query: 136 MALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL 170
MALLA++ PE+SP LL RQ VA LN AIL
Sbjct: 144 MALLAFDNPEESPFGDLLHTSQRQKVASELNAAIL 178
>sp|Q5ZKQ7|GID8_CHICK Glucose-induced degradation protein 8 homolog OS=Gallus gallus
GN=GID8 PE=2 SV=1
Length = 228
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 10 HIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNA 69
++ I D++ ++++YLV +KE + F +G+ +P+ LE ++ R +I L+G
Sbjct: 21 NLHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQI 79
Query: 70 LKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY- 128
+AI L L +LL+ N+ L+F L H +EL+ R+ ALEFAQT+L G+ +
Sbjct: 80 QEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESREC 139
Query: 129 VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
+ ++E +ALLA++ PE+SP LL++ RQ V +N+A+L + R
Sbjct: 140 LTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENR 186
>sp|Q32L52|GID8_BOVIN Glucose-induced degradation protein 8 homolog OS=Bos taurus GN=GID8
PE=2 SV=1
Length = 228
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 17 DIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELT 76
D++ ++++YLV +KE + F +G+ +P+ LE ++ R +I L+G +AI L
Sbjct: 28 DMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALI 86
Query: 77 EELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY-VEKLEDF 135
L +LL+ N+ L+F L H +EL+ R+ ALEFAQT+L G+ + + ++E
Sbjct: 87 NSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERT 146
Query: 136 MALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
+ALLA++ PE SP LL++ RQ V +N+A+L + R
Sbjct: 147 LALLAFDNPEDSPFGDLLNMMQRQKVWSEVNQAVLDYENR 186
>sp|Q9D7M1|GID8_MOUSE Glucose-induced degradation protein 8 homolog OS=Mus musculus
GN=Gid8 PE=2 SV=1
Length = 228
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 17 DIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELT 76
D++ ++++YLV +KE + F +G+ +P+ LE ++ R +I L+G +AI L
Sbjct: 28 DMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALI 86
Query: 77 EELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY-VEKLEDF 135
L +LL+ N+ L+F L H +EL+ R+ ALEFAQT+L G+ + + ++E
Sbjct: 87 NSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERT 146
Query: 136 MALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
+ALLA++ PE+SP LL + RQ V +N+A+L + R
Sbjct: 147 LALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVLDYENR 186
>sp|Q9NWU2|GID8_HUMAN Glucose-induced degradation protein 8 homolog OS=Homo sapiens
GN=GID8 PE=1 SV=1
Length = 228
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 17 DIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELT 76
D++ ++++YLV +KE + F +G+ +P+ LE ++ R +I L+G +AI L
Sbjct: 28 DMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALI 86
Query: 77 EELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY-VEKLEDF 135
L +LL+ N+ L+F L H +EL+ R+ ALEFAQT+L G+ + + ++E
Sbjct: 87 NSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERT 146
Query: 136 MALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
+ALLA++ PE+SP LL RQ V +N+A+L + R
Sbjct: 147 LALLAFDSPEESPFGDLLHTMQRQKVWSEVNQAVLDYENR 186
>sp|Q6PC55|GID8_DANRE Glucose-induced degradation protein 8 homolog OS=Danio rerio
GN=gid8 PE=2 SV=1
Length = 228
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 10 HIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNA 69
++ I D++ ++++YLV +KE + F +G+ +P L+ ++ R +I L+G
Sbjct: 21 NVHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPNVDLDSLDERIKIREMVLKGQI 79
Query: 70 LKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY- 128
+AI L L +LL+ N+ L+F L H +EL+ R+ ALEFAQ++L G+ +
Sbjct: 80 QEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFAQSQLAEQGEESREC 139
Query: 129 VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
+ ++E +ALLA++ PE+SP LL++ RQ V +N+A+L + R
Sbjct: 140 LTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENR 186
>sp|Q54X16|GID8_DICDI Glucose-induced degradation protein 8 homolog OS=Dictyostelium
discoideum GN=DDB_G0279265 PE=3 SV=2
Length = 228
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 10 HIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQP---ANCLEDMEMRKRILHFALE 66
+ I+ +D++ +V++YLV Y+E F + + A+ + M +R I
Sbjct: 25 EVNISKSDLNKLVMNYLVIEGYQEAAAKFQEESSTQTTVDLASIADRMAIRSAIQC---- 80
Query: 67 GNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFG-KV 125
G+ K IE+ +L ++L+ N L+F L +EL+ EAL+FAQ +L P G +
Sbjct: 81 GDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEALKFAQDELAPQGEEN 140
Query: 126 QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAME 182
K++E+LE ++LL +E+ KSP+ LL RQ A LN AIL + + P+ +
Sbjct: 141 NKFLEELEKTISLLVFEDTAKSPLSSLLDHSQRQKTAGELNSAILLSQSQDKDPKLPTIL 200
Query: 183 RLIQ--QTTAVRQCL 195
+L++ QT +C+
Sbjct: 201 KLLKWAQTQLDSKCI 215
>sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1
Length = 653
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTE 77
I +V SYLVH+ Y T ++F T + L ++ R+RI L G +AIE T+
Sbjct: 294 IQKMVSSYLVHHGYCATAEAFARSTD-QTVLEELASIKNRQRIQKLVLAGRMGEAIETTQ 352
Query: 78 ELAQDLLEKNKDLHFDLLSLHFVELV 103
+L LLE+N +L F L F+E+V
Sbjct: 353 QLYPSLLERNPNLLFTLKVRQFIEMV 378
Score = 36.2 bits (82), Expect = 0.16, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 123 GKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAME 182
GK + L+D +LLAY +P SP+ + L R+ V LN AIL P+ +
Sbjct: 563 GKNTANKKMLKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLA 622
Query: 183 RLIQQTTAVRQCL 195
+ Q T QCL
Sbjct: 623 LAMGQAT---QCL 632
>sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1
Length = 729
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTE 77
I +V SYLVH+ Y T ++F T + L ++ R+RI L G +AIE T+
Sbjct: 369 IQKMVSSYLVHHGYCATAEAFARSTD-QTVLEELASIKNRQRIQKLVLAGRMGEAIETTQ 427
Query: 78 ELAQDLLEKNKDLHFDLLSLHFVELV 103
+L LLE+N +L F L F+E+V
Sbjct: 428 QLYPSLLERNPNLLFTLKVRQFIEMV 453
Score = 36.2 bits (82), Expect = 0.16, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 123 GKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAME 182
GK + L+D +LLAY +P SP+ + L R+ V LN AIL P+ +
Sbjct: 639 GKNTANKKMLKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLA 698
Query: 183 RLIQQTTAVRQCL 195
+ Q T QCL
Sbjct: 699 LAMGQAT---QCL 708
>sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTE 77
I +V SYLVH+ Y T ++F T L ++ R+RI L G +AIE T+
Sbjct: 221 IQRMVSSYLVHHGYCSTAEAFAKSTDQTVQEE-LASIKNRQRIQKLVLSGRMGEAIETTQ 279
Query: 78 ELAQDLLEKNKDLHFDLLSLHFVELV 103
+L LLE+N +L F L F+E+V
Sbjct: 280 QLYPSLLERNPNLLFTLKVRQFIEMV 305
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 123 GKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAME 182
GK L+D +LLAY +P SP+ + L R+HV +LN AIL P+ +
Sbjct: 458 GKNATNKNMLKDAFSLLAYSDPWNSPVGYQLDPIQREHVCSSLNSAILDIHNLPKQPPLS 517
Query: 183 RLIQQTTAVRQCL 195
++Q + QCL
Sbjct: 518 LALEQAS---QCL 527
>sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTE 77
I +V SYLVH+ Y T ++F T L ++ R+RI L G +AIE T+
Sbjct: 221 IQRMVSSYLVHHGYCSTAEAFAKSTDQTVQEE-LASIKNRQRIQKLVLSGRMGEAIETTQ 279
Query: 78 ELAQDLLEKNKDLHFDLLSLHFVELV 103
+L LLE+N +L F L F+E+V
Sbjct: 280 QLYPSLLERNPNLLFTLKVRQFIEMV 305
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 123 GKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAME 182
GK L+D +LLAY +P SP+ + L R+HV +LN AIL P+ +
Sbjct: 458 GKNATNKNMLKDAFSLLAYSDPWNSPVGYQLDPIQREHVCSSLNSAILDIHNLPKQPPLS 517
Query: 183 RLIQQTTAVRQCL 195
++Q + QCL
Sbjct: 518 LALEQAS---QCL 527
>sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1
Length = 597
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTE 77
I +V SYLVH+ Y T ++F T L ++ R++I L G +AIE T+
Sbjct: 251 IQKMVASYLVHHSYCATAEAFAKSTDQAVHEE-LASIKNRQKIQKLVLSGRMGEAIETTQ 309
Query: 78 ELAQDLLEKNKDLHFDLLSLHFVELV 103
+L LLE+N DL F L F+E+V
Sbjct: 310 QLYPSLLERNPDLLFMLKVRQFIEMV 335
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 123 GKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAME 182
GK + L+D +LLAY +P SP+ + L R+ V LN AIL P+ +
Sbjct: 507 GKNSANKKMLKDAFSLLAYSDPWNSPVGYQLDSIQREPVCSTLNSAILETHNLPKQPPLA 566
Query: 183 RLIQQTTAVRQCLS 196
+ Q QCLS
Sbjct: 567 LAMGQAA---QCLS 577
>sp|Q4Z8K6|RBP9X_DROME Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster
GN=RanBPM PE=1 SV=1
Length = 962
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 7 QYEHI-AINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFAL 65
+Y H+ +N ++ +V +YLVHN + +T ++F T + L ++ R++I+ L
Sbjct: 609 RYPHLLETPENLMNRLVSTYLVHNAFSKTAEAFNGYTNQTFNED-LASIKTRQKIIKLIL 667
Query: 66 EGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELV 103
G +AIE T LLE NK+L F L F+E++
Sbjct: 668 TGKMSQAIEHTLRSFPGLLENNKNLWFALKCRQFIEMI 705
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 104 CSRKCTEALEFAQTKLTPFGK--------VQKYVEKLEDFMALLAYEEPEKSPMFHLLSL 155
C R + LEF + +L+ G+ ++ + LED +L+AY P SP+ LL
Sbjct: 844 CGRVIEKILEFGK-ELSSMGQQLEKENLMTEEERQMLEDAFSLIAYSNPWSSPLGWLLCP 902
Query: 156 EYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQE-LGKD 202
R+ V+ LN AIL R +E L+ + + + + Q LG+D
Sbjct: 903 SRRESVSTTLNSAILESLNFERRPPLEYLVAHASELIKVIGQHSLGED 950
>sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=2
Length = 620
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLE-DMEMRKRILHFALEGNALKAIELT 76
+ N+V SYLVH+ Y T +F T + P + ++ R++I LEG +AIE T
Sbjct: 257 LQNMVSSYLVHHGYCSTATAFARMT--ETPIQEEQASIKNRQKIQKLVLEGRVGEAIETT 314
Query: 77 EELAQDLLEKNKDLHFDLLSLHFVELV 103
+ LLE N +L F L FVE+V
Sbjct: 315 QRFYPGLLEHNPNLLFMLKCRQFVEMV 341
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 122 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAM 181
+GK + E L+D +LLAY +P P+ H L R+ V LN AIL P+ +
Sbjct: 529 YGKNLAHTEMLQDAFSLLAYSDPWSCPVGHQLDPIQREPVCAALNSAILESQNLPKQPPL 588
Query: 182 ERLIQQTTAVRQCL 195
+ Q + +CL
Sbjct: 589 MLALGQAS---ECL 599
>sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1
Length = 620
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLE-DMEMRKRILHFALEGNALKAIELT 76
+ N+V SYLVH+ Y T +F T + P + ++ R++I LEG +AIE T
Sbjct: 257 LQNMVSSYLVHHGYCATATAFARMT--ETPIQEEQASIKNRQKIQKLVLEGRVGEAIETT 314
Query: 77 EELAQDLLEKNKDLHFDLLSLHFVELV 103
+ LLE N +L F L FVE+V
Sbjct: 315 QRFYPGLLEHNPNLLFMLKCRQFVEMV 341
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 122 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPR 177
+GK + E L+D +LLAY +P P+ L R+ V LN AIL P+
Sbjct: 529 YGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPK 584
>sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1
Length = 620
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLE-DMEMRKRILHFALEGNALKAIELT 76
+ N+V SYLVH+ Y T +F T + P + ++ R++I LEG +AIE T
Sbjct: 257 LQNMVSSYLVHHGYCATATAFARMT--ETPIQEEQASIKNRQKIQKLVLEGRVGEAIETT 314
Query: 77 EELAQDLLEKNKDLHFDLLSLHFVELV 103
+ LLE N +L F L FVE+V
Sbjct: 315 QRFYPGLLEHNPNLLFMLKCRQFVEMV 341
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 122 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPR 177
+GK + E L+D +LLAY +P P+ L R+ V LN AIL P+
Sbjct: 529 YGKDLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPK 584
>sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1
Length = 604
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCT-GMKQPANCLED---MEMRKRILHFALEGNALKAI 73
+ N+V SYLVH+ Y T +F T M Q ED ++ R+RI L G +AI
Sbjct: 245 LQNMVSSYLVHHGYCATAMAFARATETMIQ-----EDQTSIKNRQRIQKLVLAGRVGEAI 299
Query: 74 ELTEELAQDLLEKNKDLHFDLLSLHFVELV 103
+ T++L LLE N +L F L FVE+V
Sbjct: 300 DATQQLYPGLLEHNPNLLFMLKCRQFVEMV 329
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 122 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAM 181
+GK + + L+D +LLAY +P P+ L R+ + LN AIL P+ +
Sbjct: 513 YGKNATHKKMLQDAFSLLAYSDPWNCPVGQQLDPMQREAICSALNSAILESQNLPKQPPL 572
Query: 182 ERLIQQTTAVRQCLSQ 197
+ Q T Q +++
Sbjct: 573 MLALGQATECVQLMAR 588
>sp|Q96G75|RMD5B_HUMAN Protein RMD5 homolog B OS=Homo sapiens GN=RMND5B PE=2 SV=1
Length = 393
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 59 RILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSR--KCTEALEFAQ 116
RIL E + A+E Q LLE N L F L LHF+ L+ K EAL +A+
Sbjct: 161 RILEALHEQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPAKQLEALSYAR 220
Query: 117 TKLTPFGKVQKYVEKLEDFMALLAYEE--PEKSPMFHLLSLEYRQHVADNLNR 167
PF ++ + +++ M L Y EKSP HLL + + + R
Sbjct: 221 -HFQPFARLHQ--REIQVMMGSLVYLRLGLEKSPYCHLLDSSHWAEICETFTR 270
>sp|Q91YQ7|RMD5B_MOUSE Protein RMD5 homolog B OS=Mus musculus GN=Rmnd5b PE=2 SV=1
Length = 393
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 59 RILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCS--RKCTEALEFAQ 116
RIL E + A+E Q LLE N L F L LHF+ L+ K EAL +A+
Sbjct: 161 RILEALHEQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSYAR 220
Query: 117 TKLTPFGKVQKYVEKLEDFMALLAYEE--PEKSPMFHLLSLEYRQHVADNLNR 167
PF ++ + +++ M L Y EKSP HLL + + + R
Sbjct: 221 -HFQPFARLHQ--REIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTR 270
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic
OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 59 RILHFALEGNALKAIELTEELAQDLLEKNKDLHFDL------LSLHFVELVCSRKCTEAL 112
R L + NA A L EE + L + D++ DL L+ + + KC++
Sbjct: 21 RTLQTFAKYNAQAASALREERKKPLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSKDG 80
Query: 113 EFAQTKLTPFGKVQ 126
EF Q +L+P+G +Q
Sbjct: 81 EFTQGELSPYGNIQ 94
>sp|O94712|YC5C_SCHPO Uncharacterized protein C1259.12c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1259.12c PE=4 SV=2
Length = 491
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 43/208 (20%)
Query: 18 IHNIVLSYLVHNCYKETVDSFISCTGMKQPANC-LEDMEMRKRILHFALEGN---ALKAI 73
++ ++ S+L++N + ET F P N + D +RK I G A+ I
Sbjct: 276 LNELISSFLLNNGFVETAKKFC-------PENTEVSDASIRKEISSMLANGQLDLAMTKI 328
Query: 74 ELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTP----------FG 123
+ +A +++ DL L L F++LV K T ++K T
Sbjct: 329 DCQYPVA---IQECPDLIMSLRFLRFLQLV---KVTHDQRLTKSKGTKQISQEEDLRILQ 382
Query: 124 KVQKYVEKLED----------------FMALLAYEEPEKSPMFHLLSLEYRQHVADNLNR 167
+ Y ++L + M LLAY +P SP+ +S ++ +++A+ +N
Sbjct: 383 PLMNYAQELSNDYEHTKSSNLQAMIKLSMGLLAYFDPFSSPLSFFMSSDFHKYMAEQINC 442
Query: 168 AILAHAERPRYAAMERLIQQTTAVRQCL 195
+L + + R +Q T + L
Sbjct: 443 LLLELTGHSPDSELRRFLQHTVCLNDLL 470
>sp|Q1DTI6|FYV10_COCIM Protein FYV10 OS=Coccidioides immitis (strain RS) GN=FYV10 PE=3
SV=1
Length = 402
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 58 KRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQT 117
+RI H G +A++ E L + L F+L ++E++ EA + A+
Sbjct: 169 QRIAHSLRRGETKEALQWCGENKVALKKIQNRLEFELRLQQYIEVLRVGDKAEARQHAKK 228
Query: 118 KLTPFGKVQKYVEKLEDFMALLAYEEPEKS-PMFHLLSLEYRQHVAD 163
LTP + Q + ++ LLAY ++ P + SLE +H++D
Sbjct: 229 FLTPHSETQSH--DIQRAAGLLAYPPDTRAEPYMSMYSLERWKHLSD 273
>sp|A3LPW2|FYV10_PICST Protein FYV10 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=FYV10 PE=3 SV=2
Length = 511
Score = 33.9 bits (76), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 83 LLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY-----------VEK 131
L + N +L F++ F+ L+ EA++F+ L+P+G V Y + +
Sbjct: 232 LKKANSNLEFEINYCRFLSLIEKGDVNEAIKFSSINLSPYGNVSNYQDTDRANHEHNLNR 291
Query: 132 LEDFMALLAY 141
L++ LL Y
Sbjct: 292 LKEIGGLLVY 301
>sp|Q6BYF0|FYV10_DEBHA Protein FYV10 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=FYV10 PE=3 SV=2
Length = 511
Score = 33.9 bits (76), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 83 LLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKY-----------VEK 131
L + N +L F++ F+ L+ EA++F+Q L+P+G Y + K
Sbjct: 231 LKKANSNLEFEINYCKFLSLIEEGDVNEAIKFSQVNLSPYGNKGNYQSQEFMNHESNLNK 290
Query: 132 LEDFMALLAY 141
L++ LL Y
Sbjct: 291 LKEIGGLLVY 300
>sp|Q10446|YDED_SCHPO Uncharacterized protein C12B10.13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC12B10.13 PE=4 SV=1
Length = 240
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 18/179 (10%)
Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSF---ISCTGMKQPANCLEDMEMRKRILH 62
+Q + + I+++D+++++L YLV +E +F T P E +E I
Sbjct: 24 KQTKSVHIDNSDVNSLILDYLVIQGDEEAAKTFAEEAQITDYYIPPYVKERLE----ICE 79
Query: 63 FALEGNALKAIELTEELAQDLLEKNK---DLHFDLLSLHFVELVCSRKCTE------ALE 113
G+ AI EL ++L+ N L L + V K T L
Sbjct: 80 LIKSGSINSAICKLNELEPEILDTNSELLFELLRLRLLELIREVVEEKDTSDLAVERCLN 139
Query: 114 FAQTKLTPFGKV-QKYVEKLEDFMALLAYEEPEKSPMF-HLLSLEYRQHVADNLNRAIL 170
FA L P QK++ LE M+LL + SP ++L+ R+ VA+ N +IL
Sbjct: 140 FAHENLAPLAPSNQKFLNSLELTMSLLCFPPSSYSPALKNVLNYSQRERVANLANVSIL 198
>sp|Q640V2|RMD5A_XENTR Protein RMD5 homolog A OS=Xenopus tropicalis GN=rmnd5a PE=2 SV=1
Length = 391
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 59 RILHFALEGNALK-AIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCT--EALEFA 115
RIL AL+ L+ A+E + L+ +N L F L L+F+ L+ EAL++A
Sbjct: 159 RILE-ALKVRVLRPALEWAVSNREMLMAQNSSLEFKLHRLYFISLLMGGTVNQREALQYA 217
Query: 116 QTKLTPFGKVQKYVEKLEDFMALLAY--EEPEKSPMFHLLSLEYRQHVADNLNR 167
+ PF + + + ++ M L Y + E SP HLL + D R
Sbjct: 218 KN-FQPF--AENHQKDIQVLMGSLVYLRQGIENSPYVHLLDANQWADICDIFTR 268
>sp|Q9XI21|PPR44_ARATH Pentatricopeptide repeat-containing protein At1g15480,
mitochondrial OS=Arabidopsis thaliana GN=At1g15480 PE=2
SV=2
Length = 594
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 29 NCYKETVDSFISC---TGMKQPANCLE----DMEMRKRIL---HFALEGNALKAIELTEE 78
N YK +D+ S TGM+Q ++ ++++R R L H+A G KA ++ +E
Sbjct: 297 NTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKE 356
Query: 79 LAQDLLEKNKDLHFDLLSLH 98
+ + LE+N+ + DLLS++
Sbjct: 357 MEGESLEENRHMCKDLLSVY 376
>sp|Q6GLP4|RMD5A_XENLA Protein RMD5 homolog A OS=Xenopus laevis GN=rmnd5a PE=2 SV=1
Length = 391
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 59 RILHFALEGNALK-AIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCT--EALEFA 115
RIL AL+ L+ A+E + L+ +N L F L L+F+ L+ EAL++A
Sbjct: 159 RILE-ALKVRVLRPALEWAVSNREMLMAQNSSLEFKLHRLYFISLLMGGTVNQQEALQYA 217
Query: 116 QTKLTPFGKVQKYVEKLEDFMALLAY--EEPEKSPMFHLLSLEYRQHVADNLNR 167
+ PF + + + ++ M L Y + E SP HLL + D R
Sbjct: 218 KN-FQPF--AENHQKDIQVLMGSLVYLRQGIENSPYVHLLDANQWADICDIFTR 268
>sp|P72680|XERC_SYNY3 Tyrosine recombinase XerC OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=xerC PE=3 SV=1
Length = 313
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 113 EFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLN-RA-IL 170
E + K +P + + Y + L+DF +A EEP + LSL++ Q +A L RA +L
Sbjct: 19 ELLRDKRSPNTR-RTYAKALKDFFLTMAGEEPSPDVIAWFLSLDHFQAIAMVLRYRAELL 77
Query: 171 AHAERP-----RYAAMERLIQQTTAVRQC 194
A +P R AA++ L+ V +C
Sbjct: 78 AKDLKPATINVRLAAIKSLVNYARRVGKC 106
>sp|Q54PS7|PLBLD_DICDI Phospholipase B-like protein D OS=Dictyostelium discoideum GN=plbD
PE=3 SV=1
Length = 569
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 122 FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLL 153
F YVE LEDF +LL Y + E P+ H L
Sbjct: 450 FRNFAGYVESLEDFQSLLRYNDFEYDPLSHKL 481
>sp|P39142|PDP_BACSU Pyrimidine-nucleoside phosphorylase OS=Bacillus subtilis (strain
168) GN=pdp PE=3 SV=2
Length = 433
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 45 KQPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVC 104
+Q + DM + L FA+ GNAL+ E + L E +DLH +L+L +V
Sbjct: 230 RQTMAVISDMS---QPLGFAI-GNALEVKEAIDTLKG---EGPEDLHELVLTLGSQMVVL 282
Query: 105 SRKCTEALEFAQTKLTPFGKVQKYVEKLEDFM 136
++K + L+ A+ KL K K +EK +DF+
Sbjct: 283 AKKA-DTLDEARAKLEEVMKNGKALEKFKDFL 313
>sp|P39760|KTRC_BACSU Ktr system potassium uptake protein C OS=Bacillus subtilis (strain
168) GN=ktrC PE=3 SV=1
Length = 221
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 27/128 (21%)
Query: 6 RQYEHI--AINDNDIHNIVLSYLV-------------HNCYKETVDSFISCTGMKQPANC 50
R ++H+ AI +N I +L+ L+ N Y E V S I + P
Sbjct: 65 RNFDHVIVAIGEN-IQASILTTLILKELGVHTITVKAQNDYHEKVLSKIGADHIVHP--- 120
Query: 51 LEDMEMRKRILHFALEGNALKAIELTEE------LAQDLLEKNKDLHFDLLSLHFVELVC 104
+ +M KRI H + N L +EL+EE +A L N L D+ + + + +V
Sbjct: 121 --ERDMAKRIAHNIVSNNVLDYLELSEEHSLVEIVANSRLAGNTLLDLDIRAKYGINIVA 178
Query: 105 SRKCTEAL 112
++ E +
Sbjct: 179 IKRGKEVI 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,715,047
Number of Sequences: 539616
Number of extensions: 2946825
Number of successful extensions: 8032
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 7970
Number of HSP's gapped (non-prelim): 69
length of query: 215
length of database: 191,569,459
effective HSP length: 113
effective length of query: 102
effective length of database: 130,592,851
effective search space: 13320470802
effective search space used: 13320470802
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)