Query 028002
Match_columns 215
No_of_seqs 181 out of 2039
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 07:08:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028002.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028002hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r18_A Protein-L-isoaspartate( 100.0 5.5E-30 1.9E-34 198.4 19.0 202 1-205 19-227 (227)
2 2pbf_A Protein-L-isoaspartate 100.0 1.1E-29 3.8E-34 196.4 18.8 203 1-207 15-226 (227)
3 3lbf_A Protein-L-isoaspartate 100.0 1.8E-29 6.3E-34 192.9 18.7 197 1-210 11-209 (210)
4 1i1n_A Protein-L-isoaspartate 100.0 1.4E-28 4.9E-33 190.1 20.4 212 1-215 12-225 (226)
5 1jg1_A PIMT;, protein-L-isoasp 100.0 4.5E-28 1.6E-32 188.5 19.4 199 1-210 24-226 (235)
6 2yxe_A Protein-L-isoaspartate 100.0 9E-28 3.1E-32 184.2 19.4 199 1-209 10-211 (215)
7 1dl5_A Protein-L-isoaspartate 99.9 3.8E-25 1.3E-29 179.3 17.7 199 1-210 5-213 (317)
8 1vbf_A 231AA long hypothetical 99.9 2E-24 6.8E-29 167.2 15.6 183 12-208 12-199 (231)
9 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.1E-17 3.6E-22 131.9 13.4 108 60-174 62-178 (261)
10 3e05_A Precorrin-6Y C5,15-meth 99.7 5.6E-17 1.9E-21 123.0 15.6 118 50-176 24-144 (204)
11 3njr_A Precorrin-6Y methylase; 99.7 8.9E-17 3.1E-21 122.1 16.1 119 48-176 37-156 (204)
12 3hm2_A Precorrin-6Y C5,15-meth 99.7 6.6E-17 2.3E-21 119.6 13.4 120 48-176 7-129 (178)
13 2b25_A Hypothetical protein; s 99.7 5E-17 1.7E-21 132.5 13.6 161 15-177 47-222 (336)
14 1nkv_A Hypothetical protein YJ 99.7 6.9E-17 2.4E-21 126.4 13.0 116 50-175 20-141 (256)
15 3mb5_A SAM-dependent methyltra 99.7 2.9E-16 9.8E-21 123.0 14.7 121 49-177 76-197 (255)
16 3eey_A Putative rRNA methylase 99.7 1.6E-16 5.5E-21 119.7 11.7 105 66-175 20-140 (197)
17 3dh0_A SAM dependent methyltra 99.7 2.9E-16 1E-20 120.0 12.3 112 55-174 26-143 (219)
18 3f4k_A Putative methyltransfer 99.7 3.2E-16 1.1E-20 122.7 12.6 114 54-175 33-151 (257)
19 1i9g_A Hypothetical protein RV 99.7 4.1E-16 1.4E-20 123.7 13.3 127 44-177 77-206 (280)
20 3hem_A Cyclopropane-fatty-acyl 99.7 7.5E-16 2.6E-20 123.6 14.1 108 56-175 62-184 (302)
21 3p9n_A Possible methyltransfer 99.7 8E-16 2.7E-20 115.2 13.3 121 49-177 24-156 (189)
22 2pwy_A TRNA (adenine-N(1)-)-me 99.7 3.9E-16 1.3E-20 122.2 12.0 122 48-177 78-201 (258)
23 3mti_A RRNA methylase; SAM-dep 99.7 5.3E-16 1.8E-20 115.7 12.1 109 58-176 12-137 (185)
24 1vl5_A Unknown conserved prote 99.7 5E-16 1.7E-20 121.9 12.2 109 55-174 26-140 (260)
25 3jwh_A HEN1; methyltransferase 99.7 9.3E-16 3.2E-20 117.2 13.1 118 54-175 17-142 (217)
26 4hg2_A Methyltransferase type 99.7 1.2E-16 4.1E-21 125.5 8.2 102 59-175 30-136 (257)
27 3kkz_A Uncharacterized protein 99.7 4.7E-16 1.6E-20 122.6 11.6 113 55-175 34-151 (267)
28 1pjz_A Thiopurine S-methyltran 99.7 2.2E-16 7.5E-21 119.8 9.4 113 55-172 11-138 (203)
29 1xxl_A YCGJ protein; structura 99.7 8E-16 2.7E-20 119.5 12.7 112 53-175 8-125 (239)
30 2o57_A Putative sarcosine dime 99.7 1.1E-15 3.9E-20 122.1 14.0 115 54-175 66-188 (297)
31 3bus_A REBM, methyltransferase 99.7 1.4E-15 4.8E-20 120.1 14.3 111 56-175 51-167 (273)
32 3fpf_A Mtnas, putative unchara 99.7 1.6E-15 5.3E-20 120.5 14.4 104 65-177 119-225 (298)
33 3jwg_A HEN1, methyltransferase 99.7 1.1E-15 3.7E-20 117.0 13.1 120 52-175 15-142 (219)
34 1yzh_A TRNA (guanine-N(7)-)-me 99.7 2.6E-15 9E-20 114.6 14.9 103 67-176 40-158 (214)
35 4df3_A Fibrillarin-like rRNA/T 99.7 8.9E-16 3E-20 118.3 11.9 102 65-174 74-182 (233)
36 3dlc_A Putative S-adenosyl-L-m 99.7 1.1E-15 3.9E-20 116.4 12.4 113 52-174 30-148 (219)
37 1o54_A SAM-dependent O-methylt 99.6 3E-15 1E-19 118.8 13.9 119 51-177 97-216 (277)
38 3ntv_A MW1564 protein; rossman 99.6 1.3E-15 4.3E-20 117.9 10.9 114 51-172 56-174 (232)
39 1yb2_A Hypothetical protein TA 99.6 2.1E-15 7.2E-20 119.6 12.4 112 57-177 101-214 (275)
40 1kpg_A CFA synthase;, cyclopro 99.6 3E-15 1E-19 119.2 13.1 101 66-176 62-170 (287)
41 3tma_A Methyltransferase; thum 99.6 4.2E-15 1.4E-19 122.0 14.3 123 47-177 184-320 (354)
42 2gb4_A Thiopurine S-methyltran 99.6 2E-15 6.8E-20 118.3 11.6 104 66-172 66-189 (252)
43 3hnr_A Probable methyltransfer 99.6 3.5E-15 1.2E-19 114.1 12.7 106 55-176 34-147 (220)
44 3ujc_A Phosphoethanolamine N-m 99.6 9.3E-16 3.2E-20 120.4 9.7 109 55-175 44-160 (266)
45 2yvl_A TRMI protein, hypotheti 99.6 2E-14 6.8E-19 111.8 17.0 118 50-177 75-193 (248)
46 3dxy_A TRNA (guanine-N(7)-)-me 99.6 1.3E-15 4.5E-20 116.8 10.1 104 67-177 33-153 (218)
47 3dr5_A Putative O-methyltransf 99.6 1.5E-15 5.2E-20 116.7 10.4 114 55-172 41-161 (221)
48 3kr9_A SAM-dependent methyltra 99.6 1.1E-15 3.6E-20 117.3 9.3 111 60-176 7-121 (225)
49 3evz_A Methyltransferase; NYSG 99.6 4E-15 1.4E-19 114.6 12.7 102 65-176 52-181 (230)
50 4dcm_A Ribosomal RNA large sub 99.6 2.9E-15 9.9E-20 123.7 12.6 114 57-177 213-337 (375)
51 2fca_A TRNA (guanine-N(7)-)-me 99.6 3.6E-15 1.2E-19 114.0 12.2 104 67-177 37-156 (213)
52 1nt2_A Fibrillarin-like PRE-rR 99.6 4.1E-15 1.4E-19 113.4 12.5 100 66-174 55-161 (210)
53 3vc1_A Geranyl diphosphate 2-C 99.6 3.1E-15 1.1E-19 120.6 12.4 103 66-175 115-222 (312)
54 1nv8_A HEMK protein; class I a 99.6 5E-15 1.7E-19 118.0 13.1 129 38-177 92-252 (284)
55 3gu3_A Methyltransferase; alph 99.6 2.5E-15 8.4E-20 119.7 11.3 115 53-176 8-128 (284)
56 1dus_A MJ0882; hypothetical pr 99.6 5E-15 1.7E-19 110.6 12.2 112 54-177 40-160 (194)
57 2ift_A Putative methylase HI07 99.6 1E-15 3.4E-20 116.0 8.4 121 51-178 37-167 (201)
58 1l3i_A Precorrin-6Y methyltran 99.6 3.5E-15 1.2E-19 111.3 11.2 118 49-176 16-136 (192)
59 3l8d_A Methyltransferase; stru 99.6 2.5E-15 8.5E-20 116.5 10.8 106 59-176 44-155 (242)
60 1ve3_A Hypothetical protein PH 99.6 9.6E-15 3.3E-19 112.0 14.0 112 55-176 25-144 (227)
61 3ofk_A Nodulation protein S; N 99.6 2.3E-15 7.7E-20 114.9 10.2 98 66-175 49-155 (216)
62 3grz_A L11 mtase, ribosomal pr 99.6 1.9E-15 6.7E-20 114.5 9.8 124 37-174 33-159 (205)
63 3tfw_A Putative O-methyltransf 99.6 5.8E-15 2E-19 115.4 12.7 113 55-173 51-169 (248)
64 1ixk_A Methyltransferase; open 99.6 2.8E-15 9.7E-20 121.1 11.2 105 66-176 116-248 (315)
65 2frn_A Hypothetical protein PH 99.6 4.1E-15 1.4E-19 118.1 11.8 103 66-176 123-227 (278)
66 3lec_A NADB-rossmann superfami 99.6 1.8E-15 6.2E-20 116.2 9.4 111 60-176 13-127 (230)
67 4htf_A S-adenosylmethionine-de 99.6 3.6E-15 1.2E-19 118.6 11.5 103 66-176 66-175 (285)
68 2b3t_A Protein methyltransfera 99.6 4.6E-15 1.6E-19 117.6 12.0 102 67-176 108-240 (276)
69 3mgg_A Methyltransferase; NYSG 99.6 3.6E-15 1.2E-19 118.0 11.3 104 66-176 35-144 (276)
70 3dmg_A Probable ribosomal RNA 99.6 8.9E-15 3E-19 121.0 13.9 101 67-177 232-343 (381)
71 1sui_A Caffeoyl-COA O-methyltr 99.6 4.1E-15 1.4E-19 116.2 10.9 113 55-173 67-189 (247)
72 3u81_A Catechol O-methyltransf 99.6 3.4E-15 1.2E-19 114.6 10.2 112 56-173 47-169 (221)
73 3g5t_A Trans-aconitate 3-methy 99.6 5.6E-15 1.9E-19 118.4 11.8 102 66-172 34-147 (299)
74 2fpo_A Methylase YHHF; structu 99.6 2.8E-15 9.6E-20 113.6 9.5 119 50-177 37-163 (202)
75 3id6_C Fibrillarin-like rRNA/T 99.6 1E-14 3.5E-19 112.5 12.7 113 55-175 62-182 (232)
76 3dtn_A Putative methyltransfer 99.6 6E-15 2E-19 113.9 11.3 100 66-175 42-149 (234)
77 3gnl_A Uncharacterized protein 99.6 2.9E-15 9.8E-20 116.0 9.3 111 60-176 13-127 (244)
78 3ckk_A TRNA (guanine-N(7)-)-me 99.6 4.8E-15 1.6E-19 115.0 10.6 110 66-176 44-170 (235)
79 2fhp_A Methylase, putative; al 99.6 1.8E-15 6.1E-20 112.7 7.8 122 49-178 26-158 (187)
80 2fk8_A Methoxy mycolic acid sy 99.6 9.9E-15 3.4E-19 117.9 12.8 101 66-176 88-196 (318)
81 2pxx_A Uncharacterized protein 99.6 4.6E-15 1.6E-19 112.7 10.2 111 57-177 31-162 (215)
82 3duw_A OMT, O-methyltransferas 99.6 2.6E-15 8.9E-20 115.2 8.8 113 55-173 46-166 (223)
83 3bkx_A SAM-dependent methyltra 99.6 1.4E-14 4.7E-19 114.5 13.3 114 55-175 32-160 (275)
84 2esr_A Methyltransferase; stru 99.6 9.1E-16 3.1E-20 113.6 6.1 116 54-177 18-141 (177)
85 2gpy_A O-methyltransferase; st 99.6 2.3E-15 8E-20 116.3 8.6 117 49-173 37-159 (233)
86 2hnk_A SAM-dependent O-methylt 99.6 1.7E-15 5.8E-20 117.6 7.8 119 49-174 43-181 (239)
87 3m33_A Uncharacterized protein 99.6 4.4E-15 1.5E-19 114.3 10.0 93 66-172 46-140 (226)
88 2xvm_A Tellurite resistance pr 99.6 1.2E-14 4.1E-19 109.2 12.2 106 57-174 23-136 (199)
89 3lcc_A Putative methyl chlorid 99.6 5.6E-15 1.9E-19 114.2 10.5 99 68-175 66-172 (235)
90 3ocj_A Putative exported prote 99.6 2.8E-15 9.6E-20 120.5 9.0 107 63-175 113-228 (305)
91 3pfg_A N-methyltransferase; N, 99.6 6.9E-15 2.4E-19 115.6 10.9 105 55-174 37-151 (263)
92 2kw5_A SLR1183 protein; struct 99.6 1.6E-14 5.4E-19 109.0 12.4 100 66-176 28-133 (202)
93 2p8j_A S-adenosylmethionine-de 99.6 8.2E-15 2.8E-19 111.1 10.9 112 55-176 11-130 (209)
94 2p7i_A Hypothetical protein; p 99.6 4.3E-15 1.5E-19 115.2 9.6 108 55-177 30-144 (250)
95 3tr6_A O-methyltransferase; ce 99.6 1.1E-15 3.9E-20 117.4 6.2 113 55-173 52-173 (225)
96 1ws6_A Methyltransferase; stru 99.6 6.6E-15 2.3E-19 108.0 9.9 118 51-178 24-151 (171)
97 3g5l_A Putative S-adenosylmeth 99.6 3.7E-15 1.3E-19 116.5 8.9 99 67-176 43-147 (253)
98 3lpm_A Putative methyltransfer 99.6 6.7E-15 2.3E-19 115.7 10.3 112 57-176 38-178 (259)
99 3r3h_A O-methyltransferase, SA 99.6 4.5E-16 1.5E-20 121.3 3.5 113 55-173 48-169 (242)
100 2p35_A Trans-aconitate 2-methy 99.6 5.9E-15 2E-19 115.5 9.9 107 55-176 22-134 (259)
101 3ou2_A SAM-dependent methyltra 99.6 1.4E-14 4.9E-19 110.3 11.7 108 55-177 34-149 (218)
102 3thr_A Glycine N-methyltransfe 99.6 2.7E-15 9.4E-20 119.6 8.0 116 54-176 45-177 (293)
103 3htx_A HEN1; HEN1, small RNA m 99.6 3.3E-14 1.1E-18 125.4 15.4 121 54-177 709-837 (950)
104 2yqz_A Hypothetical protein TT 99.6 1E-14 3.5E-19 114.3 11.1 111 54-174 22-141 (263)
105 2nxc_A L11 mtase, ribosomal pr 99.6 2.4E-15 8.1E-20 118.0 7.4 119 41-174 97-218 (254)
106 1ri5_A MRNA capping enzyme; me 99.6 2.1E-14 7.3E-19 114.5 12.9 105 66-177 62-177 (298)
107 2bm8_A Cephalosporin hydroxyla 99.6 4.4E-15 1.5E-19 115.2 8.4 113 48-173 62-186 (236)
108 3g07_A 7SK snRNA methylphospha 99.6 3.5E-15 1.2E-19 119.3 8.1 109 66-175 44-221 (292)
109 2ozv_A Hypothetical protein AT 99.6 1.6E-14 5.3E-19 113.7 11.6 105 66-176 34-172 (260)
110 3h2b_A SAM-dependent methyltra 99.6 6.1E-15 2.1E-19 111.4 8.9 96 69-178 42-145 (203)
111 1jsx_A Glucose-inhibited divis 99.6 1.1E-14 3.9E-19 110.3 10.4 115 54-176 50-167 (207)
112 3a27_A TYW2, uncharacterized p 99.6 2.2E-14 7.4E-19 113.6 12.2 104 65-176 116-221 (272)
113 3iv6_A Putative Zn-dependent a 99.6 1.1E-14 3.7E-19 114.3 10.3 111 54-177 33-151 (261)
114 2yxd_A Probable cobalt-precorr 99.6 5.2E-14 1.8E-18 104.1 13.4 114 48-176 17-133 (183)
115 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.3E-14 4.3E-19 113.3 10.4 100 66-175 91-198 (254)
116 4fsd_A Arsenic methyltransfera 99.6 1.6E-14 5.5E-19 119.7 11.6 109 66-174 81-203 (383)
117 3g89_A Ribosomal RNA small sub 99.6 6.2E-15 2.1E-19 115.3 8.6 103 67-176 79-186 (249)
118 1u2z_A Histone-lysine N-methyl 99.6 3E-14 1E-18 119.1 13.2 122 43-173 221-358 (433)
119 1y8c_A S-adenosylmethionine-de 99.6 1.6E-14 5.5E-19 111.9 10.9 112 54-176 23-144 (246)
120 3m70_A Tellurite resistance pr 99.6 2.3E-14 7.8E-19 114.0 11.8 106 56-174 110-223 (286)
121 3ajd_A Putative methyltransfer 99.6 3.4E-15 1.2E-19 118.4 7.0 106 66-177 81-214 (274)
122 3e23_A Uncharacterized protein 99.6 1.3E-14 4.3E-19 110.4 9.9 97 65-177 40-144 (211)
123 1zx0_A Guanidinoacetate N-meth 99.6 4.2E-15 1.4E-19 115.2 7.3 99 66-173 58-169 (236)
124 1wzn_A SAM-dependent methyltra 99.6 3E-14 1E-18 111.2 12.1 100 66-176 39-147 (252)
125 3bkw_A MLL3908 protein, S-aden 99.6 1.1E-14 3.6E-19 112.9 9.5 100 66-176 41-146 (243)
126 2vdv_E TRNA (guanine-N(7)-)-me 99.6 3E-14 1E-18 111.1 12.0 110 66-176 47-175 (246)
127 1g8a_A Fibrillarin-like PRE-rR 99.6 1.4E-14 4.9E-19 111.4 10.1 101 66-174 71-178 (227)
128 3d2l_A SAM-dependent methyltra 99.6 2.3E-14 7.8E-19 111.0 11.3 105 60-176 25-139 (243)
129 4dzr_A Protein-(glutamine-N5) 99.6 5.7E-16 1.9E-20 117.7 1.9 113 54-175 17-166 (215)
130 2avd_A Catechol-O-methyltransf 99.6 6.9E-15 2.4E-19 113.2 8.0 111 57-173 59-178 (229)
131 3c3y_A Pfomt, O-methyltransfer 99.6 1.4E-14 4.7E-19 112.5 9.7 113 55-173 58-180 (237)
132 3ccf_A Cyclopropane-fatty-acyl 99.6 1.9E-14 6.6E-19 114.1 10.3 104 56-176 47-156 (279)
133 3c3p_A Methyltransferase; NP_9 99.6 1.4E-14 4.8E-19 110.2 9.1 111 56-173 45-159 (210)
134 3g2m_A PCZA361.24; SAM-depende 99.6 2.9E-14 9.8E-19 114.2 11.3 114 54-177 71-193 (299)
135 3orh_A Guanidinoacetate N-meth 99.6 3.6E-15 1.2E-19 115.7 5.7 99 66-173 58-169 (236)
136 1xdz_A Methyltransferase GIDB; 99.6 1.2E-14 4.2E-19 112.9 8.7 103 67-176 69-176 (240)
137 3sm3_A SAM-dependent methyltra 99.5 2.6E-14 8.8E-19 110.0 10.3 106 66-175 28-142 (235)
138 3uwp_A Histone-lysine N-methyl 99.5 4.5E-14 1.5E-18 116.4 12.0 116 51-173 158-287 (438)
139 2ipx_A RRNA 2'-O-methyltransfe 99.5 4.6E-14 1.6E-18 109.0 11.5 103 66-176 75-184 (233)
140 3bgv_A MRNA CAP guanine-N7 met 99.5 5.4E-14 1.8E-18 113.4 12.3 122 54-177 20-158 (313)
141 3bxo_A N,N-dimethyltransferase 99.5 7.2E-14 2.5E-18 107.9 12.4 106 55-175 27-142 (239)
142 1p91_A Ribosomal RNA large sub 99.5 6.2E-14 2.1E-18 110.5 12.2 109 56-177 72-181 (269)
143 3ege_A Putative methyltransfer 99.5 2.2E-14 7.7E-19 112.7 9.6 108 51-176 19-132 (261)
144 2frx_A Hypothetical protein YE 99.5 3.9E-14 1.3E-18 120.2 11.7 103 68-176 117-248 (479)
145 2vdw_A Vaccinia virus capping 99.5 1.6E-14 5.6E-19 116.0 8.8 108 68-177 48-172 (302)
146 1fbn_A MJ fibrillarin homologu 99.5 5.6E-14 1.9E-18 108.4 11.4 99 66-174 72-178 (230)
147 2ex4_A Adrenal gland protein A 99.5 1.6E-14 5.6E-19 112.1 8.3 101 68-176 79-187 (241)
148 3fzg_A 16S rRNA methylase; met 99.5 7.6E-15 2.6E-19 108.8 6.0 106 58-172 39-150 (200)
149 3dli_A Methyltransferase; PSI- 99.5 2.7E-14 9.3E-19 110.7 9.4 96 65-177 38-143 (240)
150 3gdh_A Trimethylguanosine synt 99.5 5E-15 1.7E-19 114.9 5.2 110 55-174 66-181 (241)
151 3cbg_A O-methyltransferase; cy 99.5 1E-14 3.5E-19 112.8 6.8 112 56-173 61-181 (232)
152 2gs9_A Hypothetical protein TT 99.5 8.4E-14 2.9E-18 105.7 11.5 102 60-177 28-135 (211)
153 3m6w_A RRNA methylase; rRNA me 99.5 8.1E-15 2.8E-19 123.6 6.3 104 66-176 99-231 (464)
154 3bt7_A TRNA (uracil-5-)-methyl 99.5 2.8E-15 9.5E-20 123.7 3.2 135 69-213 214-364 (369)
155 3i9f_A Putative type 11 methyl 99.5 2.8E-14 9.6E-19 104.8 8.2 100 57-175 8-113 (170)
156 3mq2_A 16S rRNA methyltransfer 99.5 7.9E-14 2.7E-18 106.5 10.8 114 56-175 17-141 (218)
157 2yxl_A PH0851 protein, 450AA l 99.5 1.2E-13 4E-18 116.8 12.7 106 66-177 257-392 (450)
158 2fyt_A Protein arginine N-meth 99.5 6.4E-14 2.2E-18 114.3 10.7 98 66-171 62-168 (340)
159 2pjd_A Ribosomal RNA small sub 99.5 5.1E-14 1.8E-18 115.0 10.0 111 55-177 185-306 (343)
160 3ggd_A SAM-dependent methyltra 99.5 4.6E-14 1.6E-18 109.7 9.2 104 59-174 47-163 (245)
161 2igt_A SAM dependent methyltra 99.5 5.7E-14 1.9E-18 114.2 10.1 113 56-176 142-274 (332)
162 3k6r_A Putative transferase PH 99.5 8.8E-14 3E-18 110.0 10.8 100 65-172 122-223 (278)
163 2jjq_A Uncharacterized RNA met 99.5 4.5E-14 1.5E-18 118.3 9.3 144 53-213 276-422 (425)
164 1o9g_A RRNA methyltransferase; 99.5 3.9E-14 1.3E-18 110.7 8.3 106 68-173 51-213 (250)
165 2y1w_A Histone-arginine methyl 99.5 1E-13 3.5E-18 113.5 11.1 109 56-175 40-156 (348)
166 3m4x_A NOL1/NOP2/SUN family pr 99.5 2.9E-14 1E-18 120.0 7.7 106 66-177 103-237 (456)
167 3cgg_A SAM-dependent methyltra 99.5 1.8E-13 6.3E-18 102.1 11.3 98 66-177 44-150 (195)
168 3e8s_A Putative SAM dependent 99.5 6.4E-14 2.2E-18 107.1 8.7 106 55-177 41-155 (227)
169 3q87_B N6 adenine specific DNA 99.5 1.5E-13 5.3E-18 101.2 9.9 101 55-176 10-125 (170)
170 2avn_A Ubiquinone/menaquinone 99.5 1E-13 3.6E-18 108.8 9.5 97 66-177 52-155 (260)
171 3q7e_A Protein arginine N-meth 99.5 1.9E-13 6.4E-18 111.9 11.3 99 66-172 64-171 (349)
172 1g6q_1 HnRNP arginine N-methyl 99.5 4.4E-13 1.5E-17 108.9 12.7 99 66-172 36-143 (328)
173 3r0q_C Probable protein argini 99.5 1.7E-13 5.9E-18 113.3 10.4 99 66-173 61-168 (376)
174 3adn_A Spermidine synthase; am 99.5 1.1E-13 3.7E-18 110.7 8.9 107 67-175 82-199 (294)
175 2qm3_A Predicted methyltransfe 99.5 2.3E-12 7.9E-17 106.4 16.5 102 67-176 171-280 (373)
176 2a14_A Indolethylamine N-methy 99.5 3.5E-14 1.2E-18 111.8 5.3 105 66-174 53-197 (263)
177 3p2e_A 16S rRNA methylase; met 99.5 9E-14 3.1E-18 107.1 7.3 101 66-173 22-138 (225)
178 2h00_A Methyltransferase 10 do 99.5 2E-13 6.7E-18 106.8 9.3 81 68-154 65-151 (254)
179 4hc4_A Protein arginine N-meth 99.5 3.4E-13 1.2E-17 110.9 10.8 98 66-172 81-187 (376)
180 3gwz_A MMCR; methyltransferase 99.5 1.7E-12 5.8E-17 107.0 14.8 100 66-174 200-307 (369)
181 3dp7_A SAM-dependent methyltra 99.5 1.7E-12 5.7E-17 106.8 14.7 100 67-174 178-287 (363)
182 1sqg_A SUN protein, FMU protei 99.5 4E-13 1.4E-17 112.9 11.1 112 56-177 236-377 (429)
183 4dmg_A Putative uncharacterize 99.4 2.3E-13 8E-18 112.8 9.2 102 66-177 212-329 (393)
184 2r3s_A Uncharacterized protein 99.4 1.3E-12 4.6E-17 106.0 13.5 110 56-175 153-272 (335)
185 3bwc_A Spermidine synthase; SA 99.4 2.1E-13 7.3E-18 109.6 8.6 107 67-176 94-212 (304)
186 3tm4_A TRNA (guanine N2-)-meth 99.4 7.1E-13 2.4E-17 109.4 11.9 116 50-176 202-331 (373)
187 2plw_A Ribosomal RNA methyltra 99.4 5.3E-13 1.8E-17 100.5 10.3 102 57-176 12-156 (201)
188 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.6E-13 5.5E-18 115.4 8.2 148 54-213 274-427 (433)
189 2i62_A Nicotinamide N-methyltr 99.4 1.4E-13 4.7E-18 107.9 7.3 108 66-175 54-199 (265)
190 1iy9_A Spermidine synthase; ro 99.4 1.7E-13 5.7E-18 108.7 7.8 107 67-176 74-191 (275)
191 1ej0_A FTSJ; methyltransferase 99.4 1.8E-13 6E-18 100.5 7.4 103 56-176 11-138 (180)
192 2qe6_A Uncharacterized protein 99.4 1.9E-12 6.6E-17 102.5 13.9 100 68-176 77-198 (274)
193 2aot_A HMT, histamine N-methyl 99.4 1.1E-13 3.7E-18 110.6 6.3 105 67-176 51-174 (292)
194 2b78_A Hypothetical protein SM 99.4 3.8E-13 1.3E-17 111.5 9.3 105 67-178 211-335 (385)
195 1qzz_A RDMB, aclacinomycin-10- 99.4 1.1E-12 3.8E-17 108.1 12.1 101 66-175 180-288 (374)
196 1zq9_A Probable dimethyladenos 99.4 7.3E-13 2.5E-17 105.5 10.6 115 46-172 7-145 (285)
197 2ip2_A Probable phenazine-spec 99.4 1.3E-12 4.5E-17 106.1 12.3 99 66-174 166-272 (334)
198 1xj5_A Spermidine synthase 1; 99.4 2.3E-13 7.8E-18 110.6 7.8 107 67-176 119-237 (334)
199 3i53_A O-methyltransferase; CO 99.4 2E-12 6.8E-17 105.0 13.0 99 68-175 169-275 (332)
200 3mcz_A O-methyltransferase; ad 99.4 9.2E-13 3.1E-17 107.8 10.6 98 69-174 180-287 (352)
201 1inl_A Spermidine synthase; be 99.4 4.4E-13 1.5E-17 107.4 8.4 107 67-176 89-207 (296)
202 1x19_A CRTF-related protein; m 99.4 3.6E-12 1.2E-16 104.6 14.1 108 56-174 180-295 (359)
203 2g72_A Phenylethanolamine N-me 99.4 4.1E-13 1.4E-17 107.0 8.1 117 55-173 58-214 (289)
204 3b3j_A Histone-arginine methyl 99.4 3.9E-13 1.3E-17 114.3 8.4 100 66-174 156-263 (480)
205 2as0_A Hypothetical protein PH 99.4 3.4E-13 1.2E-17 112.2 7.8 105 66-177 215-338 (396)
206 3gru_A Dimethyladenosine trans 99.4 2.1E-12 7.1E-17 103.1 12.0 98 45-155 28-126 (295)
207 1tw3_A COMT, carminomycin 4-O- 99.4 2.3E-12 7.7E-17 105.8 12.5 102 66-176 181-290 (360)
208 1wxx_A TT1595, hypothetical pr 99.4 1.8E-13 6.3E-18 113.3 6.0 101 68-177 209-328 (382)
209 2f8l_A Hypothetical protein LM 99.4 1.8E-12 6.3E-17 105.8 11.8 103 66-176 128-258 (344)
210 3c0k_A UPF0064 protein YCCW; P 99.4 6.3E-13 2.2E-17 110.6 9.2 104 67-177 219-342 (396)
211 2o07_A Spermidine synthase; st 99.4 3.4E-13 1.1E-17 108.4 7.2 107 67-176 94-211 (304)
212 2b9e_A NOL1/NOP2/SUN domain fa 99.4 3.5E-12 1.2E-16 102.5 12.8 82 66-153 100-184 (309)
213 2yx1_A Hypothetical protein MJ 99.4 1.5E-12 5E-17 106.1 10.3 99 66-176 193-293 (336)
214 1mjf_A Spermidine synthase; sp 99.4 1.9E-13 6.4E-18 108.7 4.9 106 66-176 73-195 (281)
215 3gjy_A Spermidine synthase; AP 99.4 3.7E-13 1.3E-17 108.1 6.6 99 70-175 91-201 (317)
216 2b2c_A Spermidine synthase; be 99.4 4.7E-13 1.6E-17 107.9 7.2 107 67-176 107-224 (314)
217 3opn_A Putative hemolysin; str 99.4 1.2E-13 4E-18 106.9 2.6 112 55-174 25-137 (232)
218 3bzb_A Uncharacterized protein 99.4 9.9E-12 3.4E-16 98.7 13.7 107 67-176 78-207 (281)
219 2i7c_A Spermidine synthase; tr 99.4 5.1E-13 1.7E-17 106.3 6.0 107 67-176 77-194 (283)
220 3cc8_A Putative methyltransfer 99.4 1.6E-12 5.5E-17 99.5 8.7 95 67-177 31-133 (230)
221 1af7_A Chemotaxis receptor met 99.4 3.8E-12 1.3E-16 100.6 11.0 109 68-176 105-254 (274)
222 2pt6_A Spermidine synthase; tr 99.4 8E-13 2.7E-17 106.9 6.8 107 67-176 115-232 (321)
223 1uir_A Polyamine aminopropyltr 99.4 1.1E-12 3.8E-17 105.9 7.5 107 67-175 76-196 (314)
224 2cmg_A Spermidine synthase; tr 99.4 4.6E-13 1.6E-17 105.4 4.6 101 68-176 72-173 (262)
225 2okc_A Type I restriction enzy 99.3 3E-12 1E-16 108.1 9.3 124 46-176 151-309 (445)
226 3k0b_A Predicted N6-adenine-sp 99.3 1.8E-11 6E-16 101.6 13.5 123 47-177 182-353 (393)
227 1vlm_A SAM-dependent methyltra 99.3 4.3E-12 1.5E-16 97.0 9.0 91 67-177 46-142 (219)
228 3v97_A Ribosomal RNA large sub 99.3 2.7E-12 9.2E-17 113.7 8.9 104 67-176 538-659 (703)
229 2ih2_A Modification methylase 99.3 3E-12 1E-16 107.0 8.8 114 46-177 19-167 (421)
230 2nyu_A Putative ribosomal RNA 99.3 5.1E-12 1.7E-16 94.6 8.9 94 66-176 20-147 (196)
231 2h1r_A Dimethyladenosine trans 99.3 6.6E-12 2.2E-16 100.6 9.9 98 44-154 19-117 (299)
232 3ldu_A Putative methylase; str 99.3 1.4E-11 4.7E-16 102.0 12.2 121 49-177 178-347 (385)
233 3ldg_A Putative uncharacterize 99.3 3.4E-11 1.2E-15 99.5 14.4 122 48-177 176-346 (384)
234 1wy7_A Hypothetical protein PH 99.3 1.7E-10 5.7E-15 87.1 16.8 111 49-173 29-148 (207)
235 4azs_A Methyltransferase WBDD; 99.3 5.5E-12 1.9E-16 109.5 9.5 98 66-172 64-171 (569)
236 3hp7_A Hemolysin, putative; st 99.3 6.8E-12 2.3E-16 99.6 8.9 106 55-174 73-185 (291)
237 3lcv_B Sisomicin-gentamicin re 99.3 6.9E-12 2.3E-16 97.2 8.6 99 65-172 129-234 (281)
238 3lst_A CALO1 methyltransferase 99.3 9.1E-12 3.1E-16 101.8 9.3 97 66-174 182-286 (348)
239 4e2x_A TCAB9; kijanose, tetron 99.3 2.9E-13 9.9E-18 113.2 0.2 100 66-176 105-210 (416)
240 3dou_A Ribosomal RNA large sub 99.3 7E-12 2.4E-16 94.0 7.8 100 56-176 14-141 (191)
241 3fut_A Dimethyladenosine trans 99.3 2.1E-11 7.3E-16 96.1 9.9 104 46-164 26-131 (271)
242 1ne2_A Hypothetical protein TA 99.3 6.4E-11 2.2E-15 89.1 12.2 102 54-174 36-146 (200)
243 3cvo_A Methyltransferase-like 99.3 7.1E-11 2.4E-15 88.8 12.2 98 66-172 28-152 (202)
244 3frh_A 16S rRNA methylase; met 99.3 6.3E-11 2.1E-15 91.0 11.8 94 67-172 104-204 (253)
245 3axs_A Probable N(2),N(2)-dime 99.3 1.1E-11 3.7E-16 102.5 7.9 104 67-175 51-159 (392)
246 2dul_A N(2),N(2)-dimethylguano 99.2 9.5E-12 3.3E-16 102.7 7.0 100 68-174 47-164 (378)
247 3tqs_A Ribosomal RNA small sub 99.2 1.4E-11 4.8E-16 96.4 7.6 95 45-153 7-106 (255)
248 3sso_A Methyltransferase; macr 99.2 1.2E-11 4.2E-16 101.6 7.0 93 66-173 214-323 (419)
249 3giw_A Protein of unknown func 99.2 1.6E-10 5.4E-15 90.8 12.5 115 55-176 66-202 (277)
250 2zfu_A Nucleomethylin, cerebra 99.2 3E-11 1E-15 91.8 7.9 93 56-176 56-153 (215)
251 1yub_A Ermam, rRNA methyltrans 99.2 3.5E-13 1.2E-17 105.0 -3.4 116 49-178 12-149 (245)
252 2ar0_A M.ecoki, type I restric 99.2 4.1E-11 1.4E-15 103.2 8.9 129 46-177 149-315 (541)
253 2p41_A Type II methyltransfera 99.2 7.3E-11 2.5E-15 94.7 9.6 99 65-177 79-194 (305)
254 1qam_A ERMC' methyltransferase 99.2 3.4E-10 1.2E-14 88.0 12.0 115 49-177 13-149 (244)
255 1fp1_D Isoliquiritigenin 2'-O- 99.2 5.8E-11 2E-15 97.9 8.0 91 66-173 207-305 (372)
256 3p9c_A Caffeic acid O-methyltr 99.2 1.2E-10 4.2E-15 95.7 9.9 92 66-174 199-298 (364)
257 4a6d_A Hydroxyindole O-methylt 99.2 2.5E-10 8.7E-15 93.4 11.7 99 66-174 177-283 (353)
258 3reo_A (ISO)eugenol O-methyltr 99.2 8.7E-11 3E-15 96.7 8.9 91 67-174 202-300 (368)
259 2oxt_A Nucleoside-2'-O-methylt 99.2 2E-11 7E-16 96.0 4.8 108 56-176 64-187 (265)
260 2wa2_A Non-structural protein 99.1 2.1E-11 7.1E-16 96.5 4.1 100 66-176 80-195 (276)
261 2xyq_A Putative 2'-O-methyl tr 99.1 1.1E-10 3.6E-15 92.9 8.1 89 66-176 61-173 (290)
262 4fzv_A Putative methyltransfer 99.1 1.1E-10 3.6E-15 95.5 8.3 111 66-177 146-287 (359)
263 2qfm_A Spermine synthase; sper 99.1 2.1E-11 7.1E-16 99.2 4.0 107 68-177 188-317 (364)
264 1fp2_A Isoflavone O-methyltran 99.1 1.2E-10 4E-15 95.3 8.1 92 66-174 186-288 (352)
265 3uzu_A Ribosomal RNA small sub 99.1 3.1E-10 1.1E-14 89.8 9.6 109 45-165 20-136 (279)
266 3v97_A Ribosomal RNA large sub 99.1 2.1E-09 7.1E-14 95.3 15.5 125 46-177 170-350 (703)
267 1m6y_A S-adenosyl-methyltransf 99.1 2.3E-10 7.9E-15 91.5 8.6 93 52-154 12-109 (301)
268 3khk_A Type I restriction-modi 99.1 2.3E-10 7.8E-15 98.6 8.0 124 46-177 225-398 (544)
269 3lkd_A Type I restriction-modi 99.1 2.3E-09 7.9E-14 92.2 14.0 128 46-177 197-361 (542)
270 3ftd_A Dimethyladenosine trans 99.1 4.7E-10 1.6E-14 87.5 8.6 107 45-165 9-117 (249)
271 3o4f_A Spermidine synthase; am 99.0 2.7E-09 9.2E-14 84.6 12.0 108 67-176 82-200 (294)
272 2r6z_A UPF0341 protein in RSP 99.0 1.2E-10 4.1E-15 91.3 3.8 81 66-154 81-172 (258)
273 2ld4_A Anamorsin; methyltransf 99.0 1.1E-10 3.8E-15 86.0 3.1 83 66-175 10-102 (176)
274 1zg3_A Isoflavanone 4'-O-methy 99.0 5.4E-10 1.8E-14 91.6 7.3 91 67-174 192-293 (358)
275 1qyr_A KSGA, high level kasuga 99.0 4.1E-10 1.4E-14 87.9 5.7 93 48-153 3-100 (252)
276 3s1s_A Restriction endonucleas 99.0 3.2E-09 1.1E-13 93.8 11.6 130 46-177 295-468 (878)
277 3ll7_A Putative methyltransfer 99.0 8E-10 2.7E-14 91.6 7.2 79 66-153 91-173 (410)
278 2oyr_A UPF0341 protein YHIQ; a 98.9 4.5E-09 1.5E-13 82.2 7.1 87 66-155 84-176 (258)
279 4gqb_A Protein arginine N-meth 98.8 1.1E-08 3.7E-13 89.0 7.6 95 70-171 359-464 (637)
280 3ufb_A Type I restriction-modi 98.7 6.6E-08 2.2E-12 83.1 11.2 124 46-177 197-365 (530)
281 2wk1_A NOVP; transferase, O-me 98.7 4.1E-08 1.4E-12 77.6 8.5 102 67-172 105-242 (282)
282 2qy6_A UPF0209 protein YFCK; s 98.7 3E-08 1E-12 77.5 6.6 108 67-174 59-213 (257)
283 3ua3_A Protein arginine N-meth 98.6 9.8E-08 3.3E-12 83.3 7.6 97 69-171 410-531 (745)
284 1wg8_A Predicted S-adenosylmet 98.6 1.4E-07 4.9E-12 73.9 7.4 85 54-153 10-99 (285)
285 3evf_A RNA-directed RNA polyme 98.5 1.7E-07 5.8E-12 73.0 6.5 111 55-176 63-186 (277)
286 2k4m_A TR8_protein, UPF0146 pr 98.5 4.1E-07 1.4E-11 64.1 7.6 96 55-173 22-120 (153)
287 3c6k_A Spermine synthase; sper 98.5 8.8E-08 3E-12 78.3 4.4 106 67-174 204-331 (381)
288 3tka_A Ribosomal RNA small sub 98.3 5.6E-07 1.9E-11 72.2 5.7 87 54-152 45-137 (347)
289 3gcz_A Polyprotein; flavivirus 98.3 3.6E-07 1.2E-11 71.4 3.2 111 55-176 79-203 (282)
290 4auk_A Ribosomal RNA large sub 98.2 8.3E-06 2.8E-10 66.4 10.7 74 65-154 208-281 (375)
291 3b5i_A S-adenosyl-L-methionine 98.2 6.6E-06 2.3E-10 67.5 9.4 108 69-176 53-227 (374)
292 2efj_A 3,7-dimethylxanthine me 98.2 6.8E-06 2.3E-10 67.5 9.1 82 69-155 53-161 (384)
293 2zig_A TTHA0409, putative modi 98.1 7.9E-06 2.7E-10 65.1 8.3 57 54-116 224-280 (297)
294 1m6e_X S-adenosyl-L-methionnin 98.1 2.3E-06 7.9E-11 69.8 4.9 103 69-176 52-211 (359)
295 3eld_A Methyltransferase; flav 98.1 2E-05 6.9E-10 61.9 9.9 111 55-176 70-193 (300)
296 1i4w_A Mitochondrial replicati 98.1 1.4E-05 4.6E-10 65.1 9.3 81 44-136 29-116 (353)
297 2px2_A Genome polyprotein [con 98.0 3.5E-06 1.2E-10 64.9 4.0 107 54-176 61-185 (269)
298 3p8z_A Mtase, non-structural p 98.0 1.8E-05 6.2E-10 60.1 6.8 107 55-174 67-186 (267)
299 1g60_A Adenine-specific methyl 97.9 5.1E-05 1.7E-09 59.2 8.1 57 54-116 201-257 (260)
300 3lkz_A Non-structural protein 97.8 5.1E-05 1.7E-09 59.5 6.9 111 55-177 83-207 (321)
301 3r24_A NSP16, 2'-O-methyl tran 97.7 5.1E-05 1.7E-09 59.5 6.1 99 56-176 94-219 (344)
302 2oo3_A Protein involved in cat 97.7 5.1E-06 1.8E-10 65.1 -0.1 105 55-172 80-196 (283)
303 3two_A Mannitol dehydrogenase; 97.7 0.00021 7.1E-09 58.0 9.2 91 65-173 173-264 (348)
304 3m6i_A L-arabinitol 4-dehydrog 97.6 0.00042 1.4E-08 56.5 10.3 98 65-173 176-282 (363)
305 3fpc_A NADP-dependent alcohol 97.6 0.0003 1E-08 57.1 9.0 96 65-173 163-265 (352)
306 4ej6_A Putative zinc-binding d 97.6 0.00053 1.8E-08 56.1 10.1 95 65-173 179-283 (370)
307 1f8f_A Benzyl alcohol dehydrog 97.5 0.00042 1.4E-08 56.6 9.0 95 65-173 187-288 (371)
308 1pl8_A Human sorbitol dehydrog 97.5 0.00042 1.4E-08 56.4 8.7 95 65-173 168-272 (356)
309 2dph_A Formaldehyde dismutase; 97.5 0.00056 1.9E-08 56.5 9.5 95 65-173 182-298 (398)
310 1uuf_A YAHK, zinc-type alcohol 97.5 0.00014 5E-09 59.5 5.6 93 65-173 191-287 (369)
311 1e3j_A NADP(H)-dependent ketos 97.4 0.00047 1.6E-08 56.0 8.4 95 65-173 165-270 (352)
312 1kol_A Formaldehyde dehydrogen 97.4 0.00097 3.3E-08 55.0 9.9 95 65-173 182-299 (398)
313 4a2c_A Galactitol-1-phosphate 97.4 0.0017 5.9E-08 52.3 10.8 96 65-173 157-259 (346)
314 3uog_A Alcohol dehydrogenase; 97.3 0.0014 5E-08 53.3 9.4 95 65-174 186-287 (363)
315 3g7u_A Cytosine-specific methy 97.3 0.0012 3.9E-08 54.3 8.8 73 70-155 3-83 (376)
316 3s2e_A Zinc-containing alcohol 97.2 0.00041 1.4E-08 56.0 5.8 95 65-173 163-262 (340)
317 3uko_A Alcohol dehydrogenase c 97.2 0.0011 3.8E-08 54.3 8.3 95 65-173 190-294 (378)
318 3goh_A Alcohol dehydrogenase, 97.2 0.00058 2E-08 54.5 6.4 89 65-173 139-228 (315)
319 1p0f_A NADP-dependent alcohol 97.2 0.0036 1.2E-07 51.1 11.1 95 65-173 188-292 (373)
320 1piw_A Hypothetical zinc-type 97.2 0.00014 4.9E-09 59.2 2.7 93 65-173 176-275 (360)
321 3jv7_A ADH-A; dehydrogenase, n 97.2 0.00032 1.1E-08 56.7 4.7 97 65-174 168-270 (345)
322 1vj0_A Alcohol dehydrogenase, 97.2 0.0012 4E-08 54.2 7.9 95 66-173 193-297 (380)
323 3ip1_A Alcohol dehydrogenase, 97.2 0.0033 1.1E-07 51.9 10.5 96 65-173 210-317 (404)
324 2cf5_A Atccad5, CAD, cinnamyl 97.1 0.00042 1.5E-08 56.4 4.4 95 66-173 177-274 (357)
325 2fzw_A Alcohol dehydrogenase c 97.1 0.003 1E-07 51.5 9.5 95 65-173 187-291 (373)
326 1rjw_A ADH-HT, alcohol dehydro 97.1 0.0016 5.4E-08 52.5 7.6 92 65-173 161-260 (339)
327 2h6e_A ADH-4, D-arabinose 1-de 97.1 0.00014 4.8E-09 58.9 1.3 95 66-173 169-268 (344)
328 1g55_A DNA cytosine methyltran 97.1 0.00076 2.6E-08 54.7 5.5 74 69-154 2-79 (343)
329 1e3i_A Alcohol dehydrogenase, 97.1 0.002 6.9E-08 52.7 8.1 96 65-173 192-296 (376)
330 1cdo_A Alcohol dehydrogenase; 97.0 0.0023 7.7E-08 52.3 8.4 96 65-173 189-293 (374)
331 3jyn_A Quinone oxidoreductase; 97.0 0.0033 1.1E-07 50.3 9.0 95 65-174 137-239 (325)
332 2vz8_A Fatty acid synthase; tr 97.0 0.00018 6.3E-09 71.8 1.8 99 67-174 1239-1348(2512)
333 2b5w_A Glucose dehydrogenase; 97.0 0.0019 6.4E-08 52.5 7.3 95 66-173 164-272 (357)
334 1yqd_A Sinapyl alcohol dehydro 97.0 0.00095 3.3E-08 54.5 5.6 95 66-173 184-281 (366)
335 2jhf_A Alcohol dehydrogenase E 97.0 0.0034 1.1E-07 51.3 8.8 95 65-173 188-292 (374)
336 4eez_A Alcohol dehydrogenase 1 97.0 0.00062 2.1E-08 55.0 4.4 100 65-174 160-263 (348)
337 4dvj_A Putative zinc-dependent 96.9 0.0043 1.5E-07 50.6 9.1 92 68-173 171-269 (363)
338 3qwb_A Probable quinone oxidor 96.9 0.0034 1.2E-07 50.4 8.4 94 65-173 145-246 (334)
339 1eg2_A Modification methylase 96.9 0.0025 8.6E-08 51.1 7.5 57 54-116 231-290 (319)
340 2c7p_A Modification methylase 96.9 0.0041 1.4E-07 50.0 8.2 71 69-154 11-82 (327)
341 2py6_A Methyltransferase FKBM; 96.8 0.0034 1.2E-07 52.1 7.8 50 66-115 224-274 (409)
342 1boo_A Protein (N-4 cytosine-s 96.8 0.0023 7.9E-08 51.4 6.6 57 53-115 240-296 (323)
343 2d8a_A PH0655, probable L-thre 96.8 0.0038 1.3E-07 50.4 7.8 94 66-173 166-266 (348)
344 3tos_A CALS11; methyltransfera 96.7 0.0068 2.3E-07 47.0 8.3 107 67-173 68-216 (257)
345 2eih_A Alcohol dehydrogenase; 96.7 0.011 3.6E-07 47.7 9.9 94 65-173 163-264 (343)
346 2cdc_A Glucose dehydrogenase g 96.7 0.0051 1.8E-07 50.1 8.0 91 69-173 181-277 (366)
347 3tqh_A Quinone oxidoreductase; 96.7 0.0037 1.3E-07 49.9 6.9 93 65-173 149-244 (321)
348 3gms_A Putative NADPH:quinone 96.7 0.003 1E-07 50.9 6.4 95 65-174 141-243 (340)
349 1pqw_A Polyketide synthase; ro 96.7 0.0056 1.9E-07 45.1 7.4 95 65-173 35-136 (198)
350 4eye_A Probable oxidoreductase 96.7 0.0079 2.7E-07 48.5 8.7 94 65-173 156-256 (342)
351 3krt_A Crotonyl COA reductase; 96.7 0.008 2.7E-07 50.5 8.9 94 65-173 225-343 (456)
352 1xa0_A Putative NADPH dependen 96.6 0.0036 1.2E-07 50.1 6.3 97 66-173 146-245 (328)
353 3fbg_A Putative arginate lyase 96.6 0.0013 4.5E-08 53.2 3.4 91 68-173 150-247 (346)
354 3nx4_A Putative oxidoreductase 96.5 0.0023 7.8E-08 51.1 4.6 89 71-174 149-241 (324)
355 2qrv_A DNA (cytosine-5)-methyl 96.4 0.011 3.6E-07 46.9 7.8 76 66-153 13-93 (295)
356 1jvb_A NAD(H)-dependent alcoho 96.4 0.0057 2E-07 49.4 6.3 96 65-173 167-270 (347)
357 2c0c_A Zinc binding alcohol de 96.4 0.011 3.6E-07 48.2 7.8 94 65-173 160-260 (362)
358 1iz0_A Quinone oxidoreductase; 96.4 0.0027 9.4E-08 50.2 4.1 90 66-173 123-217 (302)
359 1qor_A Quinone oxidoreductase; 96.4 0.016 5.4E-07 46.3 8.6 95 65-173 137-238 (327)
360 2vn8_A Reticulon-4-interacting 96.3 0.0021 7.3E-08 52.5 3.4 93 66-173 181-279 (375)
361 2dq4_A L-threonine 3-dehydroge 96.3 0.0029 9.9E-08 51.0 4.0 94 65-173 162-261 (343)
362 2j3h_A NADP-dependent oxidored 96.3 0.011 3.7E-07 47.6 7.2 96 65-173 152-254 (345)
363 4b7c_A Probable oxidoreductase 96.3 0.0073 2.5E-07 48.5 6.0 95 65-173 146-247 (336)
364 2j8z_A Quinone oxidoreductase; 96.3 0.022 7.7E-07 46.0 9.0 94 65-173 159-260 (354)
365 1tt7_A YHFP; alcohol dehydroge 96.2 0.016 5.6E-07 46.2 7.9 95 66-173 147-246 (330)
366 4dup_A Quinone oxidoreductase; 96.1 0.02 6.8E-07 46.3 8.1 95 65-174 164-265 (353)
367 3vyw_A MNMC2; tRNA wobble urid 96.1 0.0084 2.9E-07 47.6 5.5 107 67-176 95-228 (308)
368 1wly_A CAAR, 2-haloacrylate re 96.1 0.03 1E-06 44.7 9.0 94 65-173 142-243 (333)
369 2hcy_A Alcohol dehydrogenase 1 96.1 0.014 4.6E-07 47.1 6.7 95 65-173 166-268 (347)
370 1pjc_A Protein (L-alanine dehy 96.0 0.013 4.6E-07 47.6 6.6 94 69-174 167-267 (361)
371 3gaz_A Alcohol dehydrogenase s 96.0 0.025 8.6E-07 45.5 8.1 94 65-173 147-245 (343)
372 3ce6_A Adenosylhomocysteinase; 96.0 0.02 6.7E-07 48.6 7.6 88 66-173 271-360 (494)
373 3ubt_Y Modification methylase 96.0 0.019 6.6E-07 45.9 7.3 71 70-154 1-72 (331)
374 3gqv_A Enoyl reductase; medium 96.0 0.035 1.2E-06 45.2 8.8 92 67-173 163-262 (371)
375 2vhw_A Alanine dehydrogenase; 95.9 0.0093 3.2E-07 48.9 5.1 95 68-174 167-268 (377)
376 1gu7_A Enoyl-[acyl-carrier-pro 95.8 0.0036 1.2E-07 50.8 2.3 100 65-173 163-274 (364)
377 1v3u_A Leukotriene B4 12- hydr 95.8 0.017 5.8E-07 46.2 6.2 94 65-173 142-243 (333)
378 4h0n_A DNMT2; SAH binding, tra 95.8 0.016 5.6E-07 46.6 6.1 73 70-154 4-80 (333)
379 3qv2_A 5-cytosine DNA methyltr 95.8 0.029 9.8E-07 45.1 7.3 76 68-156 9-89 (327)
380 4a0s_A Octenoyl-COA reductase/ 95.8 0.032 1.1E-06 46.6 7.9 97 65-173 217-335 (447)
381 1yb5_A Quinone oxidoreductase; 95.6 0.027 9.3E-07 45.5 6.9 95 65-174 167-269 (351)
382 1zsy_A Mitochondrial 2-enoyl t 95.6 0.018 6.2E-07 46.6 5.7 97 65-173 164-269 (357)
383 1h2b_A Alcohol dehydrogenase; 95.5 0.0055 1.9E-07 49.8 2.3 93 65-173 183-284 (359)
384 3fwz_A Inner membrane protein 95.4 0.1 3.6E-06 36.0 8.4 93 69-176 7-107 (140)
385 2eez_A Alanine dehydrogenase; 95.3 0.021 7.3E-07 46.5 5.0 94 69-174 166-266 (369)
386 3pvc_A TRNA 5-methylaminomethy 95.1 0.01 3.4E-07 52.6 2.8 108 67-174 57-211 (689)
387 2zb4_A Prostaglandin reductase 95.1 0.043 1.5E-06 44.3 6.4 95 65-173 155-259 (357)
388 3d4o_A Dipicolinate synthase s 94.9 0.17 5.9E-06 39.7 9.1 89 68-174 154-244 (293)
389 3c85_A Putative glutathione-re 94.9 0.11 3.9E-06 37.5 7.5 93 69-176 39-141 (183)
390 4dio_A NAD(P) transhydrogenase 94.8 0.17 5.7E-06 41.8 9.1 42 68-111 189-231 (405)
391 2rir_A Dipicolinate synthase, 94.7 0.19 6.5E-06 39.6 8.9 89 68-174 156-246 (300)
392 3gvp_A Adenosylhomocysteinase 94.6 0.12 4.1E-06 42.9 7.8 88 66-173 217-306 (435)
393 3me5_A Cytosine-specific methy 94.6 0.04 1.4E-06 46.6 4.9 77 69-155 88-181 (482)
394 3p2y_A Alanine dehydrogenase/p 94.5 0.38 1.3E-05 39.3 10.4 91 68-173 183-301 (381)
395 3pi7_A NADH oxidoreductase; gr 94.5 0.057 2E-06 43.4 5.6 89 70-173 166-262 (349)
396 4f3n_A Uncharacterized ACR, CO 94.3 0.083 2.8E-06 43.9 6.3 68 46-115 109-188 (432)
397 1l7d_A Nicotinamide nucleotide 94.2 0.098 3.4E-06 42.8 6.4 42 68-111 171-213 (384)
398 4a27_A Synaptic vesicle membra 94.1 0.014 4.6E-07 47.2 1.1 93 65-173 139-237 (349)
399 1x13_A NAD(P) transhydrogenase 93.9 0.081 2.8E-06 43.7 5.4 41 68-110 171-212 (401)
400 3swr_A DNA (cytosine-5)-methyl 93.7 0.14 4.7E-06 47.2 6.9 74 69-154 540-629 (1002)
401 3ps9_A TRNA 5-methylaminomethy 93.6 0.058 2E-06 47.5 4.3 107 68-174 66-219 (676)
402 1zkd_A DUF185; NESG, RPR58, st 93.6 0.32 1.1E-05 39.9 8.3 44 70-113 82-131 (387)
403 3n58_A Adenosylhomocysteinase; 93.4 0.29 9.9E-06 40.9 7.7 88 66-173 244-333 (464)
404 2g1u_A Hypothetical protein TM 93.2 0.18 6.1E-06 35.4 5.5 96 67-176 17-120 (155)
405 1jw9_B Molybdopterin biosynthe 92.9 0.084 2.9E-06 40.5 3.8 98 69-172 31-150 (249)
406 3llv_A Exopolyphosphatase-rela 92.9 0.23 7.9E-06 34.1 5.7 92 69-176 6-105 (141)
407 2zig_A TTHA0409, putative modi 92.2 0.12 4E-06 40.8 3.8 53 125-177 20-100 (297)
408 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.16 5.6E-06 35.1 4.2 87 68-172 20-108 (144)
409 3grk_A Enoyl-(acyl-carrier-pro 91.8 3.1 0.0001 32.3 11.6 75 68-153 30-119 (293)
410 3l9w_A Glutathione-regulated p 91.8 0.9 3.1E-05 37.5 8.8 93 69-176 4-104 (413)
411 4ft4_B DNA (cytosine-5)-methyl 91.7 0.47 1.6E-05 42.5 7.5 46 68-113 211-260 (784)
412 3ond_A Adenosylhomocysteinase; 91.6 1.2 4E-05 37.6 9.3 87 67-173 263-351 (488)
413 3oig_A Enoyl-[acyl-carrier-pro 91.6 1.7 5.7E-05 33.1 9.7 77 68-153 6-97 (266)
414 1lss_A TRK system potassium up 91.5 1.7 5.8E-05 29.2 8.8 92 69-175 4-103 (140)
415 3slk_A Polyketide synthase ext 91.4 0.065 2.2E-06 48.2 1.6 94 65-173 342-441 (795)
416 3h9u_A Adenosylhomocysteinase; 91.2 0.46 1.6E-05 39.5 6.4 87 67-173 209-297 (436)
417 3dfz_A SIRC, precorrin-2 dehyd 91.0 0.91 3.1E-05 34.2 7.4 94 67-176 29-123 (223)
418 1id1_A Putative potassium chan 91.0 1.8 6.3E-05 29.9 8.7 96 69-176 3-107 (153)
419 3av4_A DNA (cytosine-5)-methyl 90.9 0.6 2E-05 44.3 7.5 44 69-113 851-894 (1330)
420 3ic5_A Putative saccharopine d 90.6 0.86 3E-05 29.6 6.4 87 69-172 5-97 (118)
421 1boo_A Protein (N-4 cytosine-s 90.4 0.15 5.3E-06 40.6 2.8 54 124-177 12-87 (323)
422 2vz8_A Fatty acid synthase; tr 90.4 0.16 5.4E-06 51.4 3.4 100 65-173 1664-1769(2512)
423 4fs3_A Enoyl-[acyl-carrier-pro 90.2 3.3 0.00011 31.4 10.2 76 68-152 5-95 (256)
424 4dkj_A Cytosine-specific methy 90.2 0.51 1.7E-05 38.9 5.8 46 70-115 11-60 (403)
425 3ggo_A Prephenate dehydrogenas 89.5 2.5 8.7E-05 33.4 9.3 87 70-172 34-126 (314)
426 3pxx_A Carveol dehydrogenase; 89.2 2.3 7.9E-05 32.6 8.8 77 69-153 10-109 (287)
427 3h5n_A MCCB protein; ubiquitin 89.2 3.2 0.00011 33.5 9.7 78 69-153 118-218 (353)
428 4fn4_A Short chain dehydrogena 88.8 2.8 9.6E-05 32.1 8.8 75 68-152 6-93 (254)
429 3h8v_A Ubiquitin-like modifier 88.5 3.8 0.00013 32.1 9.5 47 69-116 36-101 (292)
430 1rjd_A PPM1P, carboxy methyl t 88.4 4 0.00014 32.6 9.8 102 67-171 96-229 (334)
431 3l4b_C TRKA K+ channel protien 88.2 3.2 0.00011 30.5 8.6 90 70-173 1-98 (218)
432 4dcm_A Ribosomal RNA large sub 88.1 1.6 5.6E-05 35.4 7.4 105 56-174 27-136 (375)
433 1y8q_A Ubiquitin-like 1 activa 87.9 1.6 5.4E-05 35.1 7.1 80 69-154 36-136 (346)
434 3abi_A Putative uncharacterize 87.8 0.98 3.4E-05 36.5 5.9 70 67-152 14-86 (365)
435 3ijr_A Oxidoreductase, short c 87.5 3.2 0.00011 32.2 8.5 77 68-152 46-134 (291)
436 4fgs_A Probable dehydrogenase 87.3 1.6 5.4E-05 33.9 6.5 73 68-153 28-113 (273)
437 3nbm_A PTS system, lactose-spe 87.2 2.5 8.5E-05 27.9 6.6 35 142-176 52-86 (108)
438 1ldn_A L-lactate dehydrogenase 87.2 6.6 0.00023 30.9 10.3 78 68-153 5-84 (316)
439 3ius_A Uncharacterized conserv 87.1 5.6 0.00019 30.2 9.7 67 70-153 6-73 (286)
440 1v8b_A Adenosylhomocysteinase; 87.0 2.3 7.8E-05 35.8 7.8 87 67-173 255-343 (479)
441 3iht_A S-adenosyl-L-methionine 87.0 1.9 6.5E-05 30.5 6.0 95 68-176 40-149 (174)
442 3rku_A Oxidoreductase YMR226C; 86.8 7.8 0.00027 29.9 10.4 79 69-153 33-125 (287)
443 1zud_1 Adenylyltransferase THI 86.8 0.69 2.3E-05 35.4 4.2 34 69-103 28-62 (251)
444 3v2g_A 3-oxoacyl-[acyl-carrier 86.6 4.8 0.00017 30.8 9.1 99 68-174 30-165 (271)
445 2aef_A Calcium-gated potassium 86.1 8.3 0.00028 28.6 10.0 93 68-176 8-107 (234)
446 1lld_A L-lactate dehydrogenase 85.9 11 0.00037 29.4 11.8 39 69-107 7-46 (319)
447 3is3_A 17BETA-hydroxysteroid d 85.8 4 0.00014 31.1 8.2 100 68-175 17-153 (270)
448 3rui_A Ubiquitin-like modifier 85.5 9.5 0.00032 30.6 10.3 34 69-103 34-68 (340)
449 3k31_A Enoyl-(acyl-carrier-pro 85.5 7.5 0.00026 30.1 9.7 74 69-153 30-118 (296)
450 3r3s_A Oxidoreductase; structu 85.4 3.5 0.00012 32.0 7.7 78 68-153 48-138 (294)
451 4g81_D Putative hexonate dehyd 85.1 2.8 9.5E-05 32.1 6.9 76 68-153 8-96 (255)
452 3d64_A Adenosylhomocysteinase; 85.0 3.2 0.00011 35.1 7.7 87 67-173 275-363 (494)
453 1leh_A Leucine dehydrogenase; 84.8 2.7 9.1E-05 34.1 6.9 43 67-111 171-214 (364)
454 3i83_A 2-dehydropantoate 2-red 84.8 5.8 0.0002 31.2 8.8 95 70-173 3-104 (320)
455 3o26_A Salutaridine reductase; 84.6 8.8 0.0003 29.4 9.9 80 68-154 11-102 (311)
456 2hmt_A YUAA protein; RCK, KTN, 84.5 2.8 9.6E-05 28.1 6.2 92 69-176 6-106 (144)
457 3cmm_A Ubiquitin-activating en 84.4 2.6 8.9E-05 39.0 7.4 76 69-152 27-122 (1015)
458 3lk7_A UDP-N-acetylmuramoylala 84.4 4.3 0.00015 33.7 8.3 75 68-154 8-83 (451)
459 3lyl_A 3-oxoacyl-(acyl-carrier 84.3 6.3 0.00022 29.3 8.6 77 69-153 5-92 (247)
460 1a5z_A L-lactate dehydrogenase 84.1 10 0.00035 29.8 10.1 75 70-153 1-77 (319)
461 1g0o_A Trihydroxynaphthalene r 83.3 9.3 0.00032 29.2 9.4 77 69-153 29-117 (283)
462 4gsl_A Ubiquitin-like modifier 83.3 9.5 0.00032 33.1 10.0 47 69-116 326-392 (615)
463 2g5c_A Prephenate dehydrogenas 83.1 5.4 0.00018 30.5 7.9 87 70-172 2-94 (281)
464 3g0o_A 3-hydroxyisobutyrate de 82.5 11 0.00038 29.2 9.6 85 69-172 7-100 (303)
465 2v6b_A L-LDH, L-lactate dehydr 82.0 9.5 0.00033 29.8 9.0 97 70-175 1-117 (304)
466 1y8q_B Anthracycline-, ubiquit 81.9 5.2 0.00018 35.0 7.9 79 69-153 17-118 (640)
467 3gaf_A 7-alpha-hydroxysteroid 81.5 9.6 0.00033 28.7 8.7 76 68-153 11-99 (256)
468 3iup_A Putative NADPH:quinone 81.2 2 7E-05 34.7 5.0 85 67-165 169-262 (379)
469 1ez4_A Lactate dehydrogenase; 81.0 18 0.00063 28.4 12.2 99 68-175 4-122 (318)
470 3qiv_A Short-chain dehydrogena 80.8 9.6 0.00033 28.4 8.4 78 68-153 8-96 (253)
471 3h7a_A Short chain dehydrogena 80.8 6.8 0.00023 29.5 7.6 77 68-153 6-93 (252)
472 1zcj_A Peroxisomal bifunctiona 80.8 18 0.00063 30.1 10.8 96 70-173 38-149 (463)
473 3ucx_A Short chain dehydrogena 80.6 12 0.00041 28.3 9.0 75 68-152 10-97 (264)
474 4hp8_A 2-deoxy-D-gluconate 3-d 80.4 16 0.00055 27.7 9.5 74 68-153 8-89 (247)
475 3ado_A Lambda-crystallin; L-gu 80.4 4.2 0.00014 32.3 6.4 44 69-115 6-51 (319)
476 3tjr_A Short chain dehydrogena 80.1 11 0.00037 29.2 8.7 78 68-153 30-118 (301)
477 4g65_A TRK system potassium up 80.1 2.5 8.6E-05 35.4 5.2 69 69-151 3-76 (461)
478 2ew2_A 2-dehydropantoate 2-red 79.9 11 0.00039 29.0 8.9 39 70-111 4-44 (316)
479 2xxj_A L-LDH, L-lactate dehydr 79.6 20 0.0007 28.1 11.6 97 70-175 1-117 (310)
480 3t4x_A Oxidoreductase, short c 79.3 8.2 0.00028 29.3 7.7 79 69-153 10-95 (267)
481 1wwk_A Phosphoglycerate dehydr 79.2 3.6 0.00012 32.4 5.7 85 68-173 141-231 (307)
482 3tum_A Shikimate dehydrogenase 79.0 20 0.00068 27.6 12.4 92 67-171 123-222 (269)
483 3f9i_A 3-oxoacyl-[acyl-carrier 78.8 8.1 0.00028 28.8 7.4 77 66-153 11-94 (249)
484 1tt5_B Ubiquitin-activating en 78.6 6.6 0.00022 32.6 7.2 79 69-153 40-139 (434)
485 3rkr_A Short chain oxidoreduct 78.6 9.7 0.00033 28.7 7.9 78 68-153 28-116 (262)
486 3e8x_A Putative NAD-dependent 78.5 13 0.00044 27.3 8.4 71 69-153 21-94 (236)
487 3b1f_A Putative prephenate deh 78.3 10 0.00036 29.0 8.1 86 70-171 7-98 (290)
488 3sju_A Keto reductase; short-c 78.2 12 0.0004 28.6 8.3 78 68-153 23-111 (279)
489 3hn2_A 2-dehydropantoate 2-red 78.1 4 0.00014 32.0 5.6 95 70-173 3-102 (312)
490 3hwr_A 2-dehydropantoate 2-red 77.8 8.3 0.00028 30.3 7.5 95 69-173 19-119 (318)
491 3jyo_A Quinate/shikimate dehyd 77.6 3.8 0.00013 31.9 5.3 48 67-115 125-173 (283)
492 3ioy_A Short-chain dehydrogena 77.5 14 0.00047 28.9 8.7 80 68-153 7-97 (319)
493 1hyh_A L-hicdh, L-2-hydroxyiso 77.5 23 0.00079 27.5 12.1 78 70-155 2-81 (309)
494 2f1k_A Prephenate dehydrogenas 77.5 9.2 0.00031 29.1 7.5 86 70-175 1-91 (279)
495 3tfo_A Putative 3-oxoacyl-(acy 77.4 11 0.00038 28.6 7.9 77 69-153 4-91 (264)
496 1lnq_A MTHK channels, potassiu 77.4 14 0.00049 29.0 8.8 92 69-176 115-213 (336)
497 3o38_A Short chain dehydrogena 77.2 13 0.00045 27.9 8.3 77 68-153 21-111 (266)
498 3ldh_A Lactate dehydrogenase; 77.1 26 0.00088 27.9 14.2 100 68-176 20-140 (330)
499 3awd_A GOX2181, putative polyo 76.3 18 0.0006 27.0 8.7 77 68-152 12-99 (260)
500 4g65_A TRK system potassium up 76.2 12 0.00042 31.2 8.3 89 51-152 217-309 (461)
No 1
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.97 E-value=5.5e-30 Score=198.36 Aligned_cols=202 Identities=47% Similarity=0.816 Sum_probs=174.7
Q ss_pred ChhhhhhcCCCCCHHHHHHHHhCcCcCCCCCCCCCCcCCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCcc
Q 028002 1 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTG 80 (215)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G 80 (215)
|+++|++.|++.+++|.++|..+||+.|.|.. +|.|.+++++.++.+++|.+...+++.+..++.++.+|||+|||+|
T Consensus 19 l~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~--~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G 96 (227)
T 1r18_A 19 LIRQLKDHGVIASDAVAQAMKETDRKHYSPRN--PYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSG 96 (227)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSC--TTBSSCEEEETTEEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTS
T ss_pred HHHHHHhcCCCCCHHHHHHHHhCCHHHcCCcc--cccCCCcccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECCCcc
Confidence 57899999988999999999999999999985 9999999999999999999999999988545788899999999999
Q ss_pred HHHHHHHHHhCC-----CCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCC
Q 028002 81 YLTACFALMVGP-----QGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPE 155 (215)
Q Consensus 81 ~~~~~l~~~~~~-----~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~ 155 (215)
..+..+++..+. .++|+++|+++.+++.+++++...+.. .+...++.+..+|....++..++||+|++...+++
T Consensus 97 ~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 97 YLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS-MLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPD 175 (227)
T ss_dssp HHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH-HHHHTSEEEEESCGGGCCGGGCSEEEEEECSCBSS
T ss_pred HHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcc-ccCCCceEEEECCcccCCCcCCCccEEEECCchHH
Confidence 999999987642 258999999999999999998765410 00015899999998875544468999999999999
Q ss_pred chHHHHHhcCCCcEEEEEeCC--CceeEEEEEEcCCCceEEEeeceEEEeec
Q 028002 156 IPQALIDQLKPGGRMVIPVGN--IFQDLKVVDKNQDGSLSIWSETSVRYVPL 205 (215)
Q Consensus 156 ~~~~~~~~Lk~gG~lv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 205 (215)
+++.+.+.|||||+++++++. ..+.+..+.+..++.|.....+.+.|+|+
T Consensus 176 ~~~~~~~~LkpgG~lvi~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~p~ 227 (227)
T 1r18_A 176 TPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPL 227 (227)
T ss_dssp CCHHHHHTEEEEEEEEEEESCSSSCEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred HHHHHHHHhcCCCEEEEEEecCCCceEEEEEEEcCCCcEEEEEeccEEEeeC
Confidence 999999999999999999975 46778888887788999999999999996
No 2
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.97 E-value=1.1e-29 Score=196.43 Aligned_cols=203 Identities=36% Similarity=0.610 Sum_probs=174.6
Q ss_pred ChhhhhhcCCCCCHHHHHHHHhCcCcCCCCCCCCCCcCCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCcc
Q 028002 1 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTG 80 (215)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G 80 (215)
|+++|++.|++.++++.++|+.+||+.|.|+. .|.+.+++++.+..+..|.....+++.+..++.++.+|||+|||+|
T Consensus 15 ~~~~l~~~~~~~~~~v~~~~~~~~r~~f~p~~--~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G 92 (227)
T 2pbf_A 15 LLENLKRRGIIDDDDVYNTMLQVDRGKYIKEI--PYIDTPVYISHGVTISAPHMHALSLKRLINVLKPGSRAIDVGSGSG 92 (227)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSS--TTSSSCEEEETTEEECCHHHHHHHHHHHTTTSCTTCEEEEESCTTS
T ss_pred HHHHHHhcCCcCCHHHHHHHHhCCHHHcCCcc--cCCCCccccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECCCCC
Confidence 68899999988999999999999999999985 8999999999999999999999988888545788899999999999
Q ss_pred HHHHHHHHHhC----CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC----CCCCCccEEEEccC
Q 028002 81 YLTACFALMVG----PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW----PEFAPYDAIHVGAA 152 (215)
Q Consensus 81 ~~~~~l~~~~~----~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~~D~V~~~~~ 152 (215)
..+..+++..+ +..+|+++|+++.+++.+++++...+.. .....++.++.+|..... ...++||+|++...
T Consensus 93 ~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~ 171 (227)
T 2pbf_A 93 YLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPE-LLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGAS 171 (227)
T ss_dssp HHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGG-GGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSB
T ss_pred HHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcc-ccccCCEEEEECChHhcccccCccCCCcCEEEECCc
Confidence 99999999875 5569999999999999999998876420 001258999999988765 43478999999999
Q ss_pred CCCchHHHHHhcCCCcEEEEEeCC-CceeEEEEEEcCCCceEEEeeceEEEeeccc
Q 028002 153 APEIPQALIDQLKPGGRMVIPVGN-IFQDLKVVDKNQDGSLSIWSETSVRYVPLTS 207 (215)
Q Consensus 153 ~~~~~~~~~~~Lk~gG~lv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 207 (215)
.+++++.+.++|+|||+++++++. ..+.+..+.+ .++.|.....+.+.|+|+++
T Consensus 172 ~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pl~~ 226 (227)
T 2pbf_A 172 ASELPEILVDLLAENGKLIIPIEEDYTQVLYEITK-KNGKIIKDRLFDVCFVSLKK 226 (227)
T ss_dssp BSSCCHHHHHHEEEEEEEEEEEEETTEEEEEEEEC-SCC-CEEEEEEEECCCBCCC
T ss_pred hHHHHHHHHHhcCCCcEEEEEEccCCceEEEEEEE-eCCeEEEEEeccEEEEeccC
Confidence 999999999999999999999874 3566777777 68889999999999999985
No 3
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.97 E-value=1.8e-29 Score=192.93 Aligned_cols=197 Identities=37% Similarity=0.601 Sum_probs=175.8
Q ss_pred ChhhhhhcCCCCCHHHHHHHHhCcCcCCCCCC--CCCCcCCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCC
Q 028002 1 MVEHLQHYGVITSKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSG 78 (215)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~y~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G 78 (215)
|+++|+..| +.++++.++|..+||+.|.|+. ...|.+..++++.+..+..|.....+++.+. ..++.+|||+|||
T Consensus 11 ~~~~l~~~g-v~~~~~~~~~~~~~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G 87 (210)
T 3lbf_A 11 LLDQLRAQG-IQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLE--LTPQSRVLEIGTG 87 (210)
T ss_dssp HHHHHHHTT-CCCHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECTTSCEECCHHHHHHHHHHTT--CCTTCEEEEECCT
T ss_pred HHHHHHHcC-CCCHHHHHHHHhCCHHHcCCcchhhhccCCCccccCCCCEeCCHHHHHHHHHhcC--CCCCCEEEEEcCC
Confidence 467899999 5899999999999999999884 7788998999999999999999999988886 7888999999999
Q ss_pred ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCCchH
Q 028002 79 TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPEIPQ 158 (215)
Q Consensus 79 ~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~~~~ 158 (215)
+|..+..+++.. .+++++|+++.+++.+++++...+. .++++..+|........++||+|+++..++++.+
T Consensus 88 ~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 158 (210)
T 3lbf_A 88 SGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDL------HNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT 158 (210)
T ss_dssp TSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT
T ss_pred CCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCC------CceEEEECCcccCCccCCCccEEEEccchhhhhH
Confidence 999999999883 7999999999999999999987654 5799999999876665578999999999999999
Q ss_pred HHHHhcCCCcEEEEEeCCCceeEEEEEEcCCCceEEEeeceEEEeecccCcc
Q 028002 159 ALIDQLKPGGRMVIPVGNIFQDLKVVDKNQDGSLSIWSETSVRYVPLTSRDA 210 (215)
Q Consensus 159 ~~~~~Lk~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 210 (215)
.+.++|+|||++++++++..+.+..+.+. .+.|......++.|+|++.+.+
T Consensus 159 ~~~~~L~pgG~lv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~f~pl~~~~~ 209 (210)
T 3lbf_A 159 ALMTQLDEGGILVLPVGEEHQYLKRVRRR-GGEFIIDTVEAVRFVPLVKGEL 209 (210)
T ss_dssp HHHHTEEEEEEEEEEECSSSCEEEEEEEE-TTEEEEEEEEECCCCBCCCSSC
T ss_pred HHHHhcccCcEEEEEEcCCceEEEEEEEc-CCeEEEEEeccEEEEEccCccC
Confidence 99999999999999999977777777774 7889999999999999998764
No 4
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.97 E-value=1.4e-28 Score=190.06 Aligned_cols=212 Identities=53% Similarity=0.884 Sum_probs=178.5
Q ss_pred ChhhhhhcCCCCCHHHHHHHHhCcCcCCCCCCCCCCcCCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCcc
Q 028002 1 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTG 80 (215)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G 80 (215)
|+++|++.|++.++.+.++|..++|+.|.+.. .|.+.+.+.+.+..+..|.....+++.+..++.++.+|||+|||+|
T Consensus 12 l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~--~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G 89 (226)
T 1i1n_A 12 LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSG 89 (226)
T ss_dssp HHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSC--TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTTCEEEEETCTTS
T ss_pred HHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCc--cCCCCccccCCCceecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcC
Confidence 47889999988999999999999999998875 8999999998888999999888888888645778899999999999
Q ss_pred HHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCCchHHH
Q 028002 81 YLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPEIPQAL 160 (215)
Q Consensus 81 ~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~~~~~~ 160 (215)
..+..+++.+++..+|+++|+++.+++.+++++...+.. .....++.+..+|........++||+|+++..++++++.+
T Consensus 90 ~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~ 168 (226)
T 1i1n_A 90 ILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT-LLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQAL 168 (226)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTH-HHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCHHH
T ss_pred HHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc-ccCCCcEEEEECCcccCcccCCCcCEEEECCchHHHHHHH
Confidence 999999998766679999999999999999988764320 0011589999999876554447899999999999999999
Q ss_pred HHhcCCCcEEEEEeCCC--ceeEEEEEEcCCCceEEEeeceEEEeecccCccccCCC
Q 028002 161 IDQLKPGGRMVIPVGNI--FQDLKVVDKNQDGSLSIWSETSVRYVPLTSRDAQLRGW 215 (215)
Q Consensus 161 ~~~Lk~gG~lv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 215 (215)
.++|||||+++++++.. .+.+..+.+..++.|.....+++.|+|++...++...|
T Consensus 169 ~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~~~~~~ 225 (226)
T 1i1n_A 169 IDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQWSRW 225 (226)
T ss_dssp HHTEEEEEEEEEEESCTTSCEEEEEEEECTTSCEEEEEEEEECCCBCCCHHHHCCCC
T ss_pred HHhcCCCcEEEEEEecCCCceEEEEEEEcCCCcEEEEEcCceEEEeccCCccccccc
Confidence 99999999999998764 35566777777889999999999999999875554443
No 5
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.96 E-value=4.5e-28 Score=188.53 Aligned_cols=199 Identities=40% Similarity=0.633 Sum_probs=173.1
Q ss_pred ChhhhhhcCCCCCHHHHHHHHhCcCcCCCCCC--CCCCcCCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCC
Q 028002 1 MVEHLQHYGVITSKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSG 78 (215)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~y~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G 78 (215)
|++.|++.|.++++++.++|..++|+.|.|+. ...|.+.+.+++.+..+..|.+...+++.+. ..++.+|||+|||
T Consensus 24 l~~~l~~~~~~~~~~~~~a~~~v~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G 101 (235)
T 1jg1_A 24 TVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIAN--LKPGMNILEVGTG 101 (235)
T ss_dssp HHHHHHHTTSCCSHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECSTTCEECCHHHHHHHHHHHT--CCTTCCEEEECCT
T ss_pred HHHHHHhcCCCCCHHHHHHHHhCCHhhhCCchhhhcCccCCCcccCCCceeccHHHHHHHHHhcC--CCCCCEEEEEeCC
Confidence 57888867778999999999999999999886 6788999999999999999998999988886 7888999999999
Q ss_pred ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCCchH
Q 028002 79 TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPEIPQ 158 (215)
Q Consensus 79 ~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~~~~ 158 (215)
+|.++..+++..+ .+|+++|+++.+++.+++++...+. .++.+..+|....++...+||+|++...++++.+
T Consensus 102 ~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~~~~ 173 (235)
T 1jg1_A 102 SGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV------KNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIPE 173 (235)
T ss_dssp TSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCH
T ss_pred cCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCC------CCcEEEECCcccCCCCCCCccEEEECCcHHHHHH
Confidence 9999999999864 7899999999999999999887654 4689999997554444356999999999999999
Q ss_pred HHHHhcCCCcEEEEEeCCCc--eeEEEEEEcCCCceEEEeeceEEEeecccCcc
Q 028002 159 ALIDQLKPGGRMVIPVGNIF--QDLKVVDKNQDGSLSIWSETSVRYVPLTSRDA 210 (215)
Q Consensus 159 ~~~~~Lk~gG~lv~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 210 (215)
.+.+.|+|||++++++++.. +.+..+.+ .++.|.....+.+.|+|++...+
T Consensus 174 ~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~f~p~~~~~~ 226 (235)
T 1jg1_A 174 PLIEQLKIGGKLIIPVGSYHLWQELLEVRK-TKDGIKIKNHGGVAFVPLIGEYG 226 (235)
T ss_dssp HHHHTEEEEEEEEEEECSSSSCEEEEEEEE-ETTEEEEEEEEEECCCBCBSTTS
T ss_pred HHHHhcCCCcEEEEEEecCCCccEEEEEEE-eCCeEEEEEeccEEEEEccCCCc
Confidence 99999999999999998753 66667766 47889999999999999998754
No 6
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=9e-28 Score=184.16 Aligned_cols=199 Identities=41% Similarity=0.689 Sum_probs=172.5
Q ss_pred Chhhh-hhcCCCCCHHHHHHHHhCcCcCCCCCC--CCCCcCCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcC
Q 028002 1 MVEHL-QHYGVITSKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGS 77 (215)
Q Consensus 1 ~~~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~y~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~ 77 (215)
|+++| +..| +.+++|.++|+.+||+.|.++. ...|.+...+++.+..+..|.+...+++.+. ..++.+|||+||
T Consensus 10 ~~~~l~~~~~-~~~~~v~~a~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~ 86 (215)
T 2yxe_A 10 VIEKLIREGY-IKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGT 86 (215)
T ss_dssp HHHHHHHHTS-CCCHHHHHHHHHSCGGGGSCGGGGGGTTSCSCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECC
T ss_pred HHHHhHHhcC-CCCHHHHHHHHhCCHHHcCCchhhhhcccCCCccCCCCcEeCcHHHHHHHHHhhC--CCCCCEEEEECC
Confidence 57888 7888 6999999999999999998875 6678898899999999999998888888875 788899999999
Q ss_pred CccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCCch
Q 028002 78 GTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPEIP 157 (215)
Q Consensus 78 G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~~~ 157 (215)
|+|..+..+++..++..+++++|+++.+++.+++++...+. .++.+..+|.....+..++||+|++...++++.
T Consensus 87 G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 160 (215)
T 2yxe_A 87 GCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY------DNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP 160 (215)
T ss_dssp TTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC
T ss_pred CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEECCcccCCCCCCCeeEEEECCchHHHH
Confidence 99999999999876667999999999999999999877654 478999999866555347899999999999999
Q ss_pred HHHHHhcCCCcEEEEEeCCCceeEEEEEEcCCCceEEEeeceEEEeecccCc
Q 028002 158 QALIDQLKPGGRMVIPVGNIFQDLKVVDKNQDGSLSIWSETSVRYVPLTSRD 209 (215)
Q Consensus 158 ~~~~~~Lk~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 209 (215)
+.+.++|||||++++++++..+.+..+.+. .+.|.....+++.|+|+++.-
T Consensus 161 ~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~ 211 (215)
T 2yxe_A 161 EPLIRQLKDGGKLLMPVGRYLQRLVLAEKR-GDEIIIKDCGPVAFVPLVGKE 211 (215)
T ss_dssp HHHHHTEEEEEEEEEEESSSSEEEEEEEEE-TTEEEEEEEEEECCCBCBSTT
T ss_pred HHHHHHcCCCcEEEEEECCCCcEEEEEEEe-CCEEEEEEeccEEEEeccccc
Confidence 999999999999999998765666677665 568988999999999998764
No 7
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.93 E-value=3.8e-25 Score=179.34 Aligned_cols=199 Identities=29% Similarity=0.470 Sum_probs=166.9
Q ss_pred ChhhhhhcCCCCCHHHHHHHHhCcCcCCCCCCC---CCCcCCCc-cccCC---cccchhHHHHHHHHHHHhcCCCCCEEE
Q 028002 1 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGT---PPYVDSPM-AIGYN---ATISAPHMHATCLQLLEENLKPGMHAL 73 (215)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~y~~~~~-~~~~~---~~~~~~~~~~~~l~~l~~~~~~~~~vL 73 (215)
|+++|++.| +.+ ++.++|..+||+.|.++.. ..|.+.+. +++.+ +....|.....+++.+. +.++.+||
T Consensus 5 ~~~~l~~~g-i~~-~v~~a~~~vpr~~fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~--~~~~~~VL 80 (317)
T 1dl5_A 5 LFWILKKYG-VSD-HIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVG--LDKGMRVL 80 (317)
T ss_dssp HHHHHHHTT-CCH-HHHHHHHHSCGGGGCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTT--CCTTCEEE
T ss_pred HHHHHHHcC-ChH-HHHHHHHhCCHHHhCCchhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcC--CCCcCEEE
Confidence 468899999 578 9999999999999998863 36778777 88888 77788888888888876 78899999
Q ss_pred EEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCC
Q 028002 74 DIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAA 153 (215)
Q Consensus 74 diG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~ 153 (215)
|+|||+|.++..+++..+..++|+++|+++.+++.+++++...+. .++++..+|..+..+..++||+|++..++
T Consensus 81 DiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 81 EIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------ENVIFVCGDGYYGVPEFSPYDVIFVTVGV 154 (317)
T ss_dssp EECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEEEEEECSBB
T ss_pred EecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCeEEEECChhhccccCCCeEEEEEcCCH
Confidence 999999999999999864346799999999999999999887654 46999999988765544789999999999
Q ss_pred CCchHHHHHhcCCCcEEEEEeCCCc---eeEEEEEEcCCCceEEEeeceEEEeecccCcc
Q 028002 154 PEIPQALIDQLKPGGRMVIPVGNIF---QDLKVVDKNQDGSLSIWSETSVRYVPLTSRDA 210 (215)
Q Consensus 154 ~~~~~~~~~~Lk~gG~lv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 210 (215)
+++.+.+.+.|||||+++++++... +.+..+.+. .+.|.....++..|+|.+++..
T Consensus 155 ~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~p~~~~~~ 213 (317)
T 1dl5_A 155 DEVPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKK-DPYLVGNYKLETRFITAGGNLG 213 (317)
T ss_dssp SCCCHHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEE-TTEEEEEEEEECCCCBCCGGGS
T ss_pred HHHHHHHHHhcCCCcEEEEEECCCCcccceEEEEEEe-CCcEEEEEeccEEEEEccCccc
Confidence 9999999999999999999987653 556666554 3578888888889999987654
No 8
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.92 E-value=2e-24 Score=167.24 Aligned_cols=183 Identities=28% Similarity=0.420 Sum_probs=154.5
Q ss_pred CCHHHHHHHHhCcCcCCCCCC--CCCCc--CCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHH
Q 028002 12 TSKKVSEVMETIDRACFVPDG--TPPYV--DSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFA 87 (215)
Q Consensus 12 ~~~~~~~~~~~~~r~~~~~~~--~~~y~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~ 87 (215)
+++++.++|..+||+.|.++. ...|. +...+++.++.+..+.+...+++.+. ..++.+|||+|||+|..+..++
T Consensus 12 ~~~~v~~a~~~v~r~~f~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~ 89 (231)
T 1vbf_A 12 KTQELAEAFNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELD--LHKGQKVLEIGTGIGYYTALIA 89 (231)
T ss_dssp CCHHHHHHHHHSCHHHHSCGGGGGGSSSSTTCCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHH
T ss_pred CCHHHHHHHHhCCHHHcCCcchhhhccccCCCceeeCCCCccCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHH
Confidence 499999999999999998865 66788 88899998988889988888888876 7788999999999999999999
Q ss_pred HHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCCchHHHHHhcCCC
Q 028002 88 LMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPEIPQALIDQLKPG 167 (215)
Q Consensus 88 ~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~g 167 (215)
+.. .+++++|+++.+++.+++++... .++.++.+|.....+..++||+|++...++++.+.+.++|+||
T Consensus 90 ~~~---~~v~~vD~~~~~~~~a~~~~~~~--------~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg 158 (231)
T 1vbf_A 90 EIV---DKVVSVEINEKMYNYASKLLSYY--------NNIKLILGDGTLGYEEEKPYDRVVVWATAPTLLCKPYEQLKEG 158 (231)
T ss_dssp HHS---SEEEEEESCHHHHHHHHHHHTTC--------SSEEEEESCGGGCCGGGCCEEEEEESSBBSSCCHHHHHTEEEE
T ss_pred HHc---CEEEEEeCCHHHHHHHHHHHhhc--------CCeEEEECCcccccccCCCccEEEECCcHHHHHHHHHHHcCCC
Confidence 884 79999999999999999887542 2789999998775444478999999999999999999999999
Q ss_pred cEEEEEeCCCc-eeEEEEEEcCCCceEEEeeceEEEeecccC
Q 028002 168 GRMVIPVGNIF-QDLKVVDKNQDGSLSIWSETSVRYVPLTSR 208 (215)
Q Consensus 168 G~lv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 208 (215)
|++++++++.. .....+.+ ..+.|......+..|.|+...
T Consensus 159 G~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 199 (231)
T 1vbf_A 159 GIMILPIGVGRVQKLYKVIK-KGNSPSLENLGEVMFGRIGGL 199 (231)
T ss_dssp EEEEEEECSSSSEEEEEEEC-CTTSCEEEEEEEECCCBCCST
T ss_pred cEEEEEEcCCCccEEEEEEE-cCCeeEEEEeccEEEEEcCCc
Confidence 99999988754 44444544 466777777777788887654
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.76 E-value=1.1e-17 Score=131.91 Aligned_cols=108 Identities=19% Similarity=0.290 Sum_probs=89.1
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC
Q 028002 60 QLLEENLKPGMHALDIGSGTGYLTACFALMVG-PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW 138 (215)
Q Consensus 60 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 138 (215)
..+...++++.+|||+|||+|..+..+++.++ ++.+|+|+|+|+.|++.|++++...+.. .+++++++|+.+..
T Consensus 62 ~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~-----~~v~~~~~D~~~~~ 136 (261)
T 4gek_A 62 MLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP-----TPVDVIEGDIRDIA 136 (261)
T ss_dssp HHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS-----SCEEEEESCTTTCC
T ss_pred HHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC-----ceEEEeeccccccc
Confidence 33344578999999999999999999998764 3458999999999999999998876543 58999999988754
Q ss_pred CCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 139 PEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
. +.||+|++...++++ ++++.+.|||||.|++..
T Consensus 137 ~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 137 I--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp C--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 3 569999999887654 357889999999999863
No 10
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.75 E-value=5.6e-17 Score=122.97 Aligned_cols=118 Identities=22% Similarity=0.325 Sum_probs=98.9
Q ss_pred chhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEE
Q 028002 50 SAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSV 129 (215)
Q Consensus 50 ~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~ 129 (215)
+...+...++..+. ..++.+|||+|||+|..+..+++. ++..+++++|+++.+++.+++++...+. .++++
T Consensus 24 ~~~~i~~~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~ 94 (204)
T 3e05_A 24 TKQEVRAVTLSKLR--LQDDLVMWDIGAGSASVSIEASNL-MPNGRIFALERNPQYLGFIRDNLKKFVA------RNVTL 94 (204)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEETCTTCHHHHHHHHH-CTTSEEEEEECCHHHHHHHHHHHHHHTC------TTEEE
T ss_pred ChHHHHHHHHHHcC--CCCCCEEEEECCCCCHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHhCC------CcEEE
Confidence 55555677777776 788899999999999999999998 5668999999999999999999887654 58999
Q ss_pred EeCCCCCCCCCCCCccEEEEccCCC---CchHHHHHhcCCCcEEEEEeCC
Q 028002 130 HVGDGRKGWPEFAPYDAIHVGAAAP---EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 130 ~~~d~~~~~~~~~~~D~V~~~~~~~---~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+.+|+.+.....+.||+|+++.... .+++.+.+.|+|||++++....
T Consensus 95 ~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 95 VEAFAPEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp EECCTTTTCTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred EeCChhhhhhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999977665547899999998764 3557889999999999997654
No 11
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.74 E-value=8.9e-17 Score=122.13 Aligned_cols=119 Identities=24% Similarity=0.387 Sum_probs=99.0
Q ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe
Q 028002 48 TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL 127 (215)
Q Consensus 48 ~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v 127 (215)
.++.+.+...++..+. +.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.|++++...+.. .++
T Consensus 37 ~~~~~~~~~~~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~-~--~~v~~vD~s~~~~~~a~~~~~~~g~~-----~~v 106 (204)
T 3njr_A 37 QITKSPMRALTLAALA--PRRGELLWDIGGGSGSVSVEWCLA-G--GRAITIEPRADRIENIQKNIDTYGLS-----PRM 106 (204)
T ss_dssp CCCCHHHHHHHHHHHC--CCTTCEEEEETCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTTCT-----TTE
T ss_pred CCCcHHHHHHHHHhcC--CCCCCEEEEecCCCCHHHHHHHHc-C--CEEEEEeCCHHHHHHHHHHHHHcCCC-----CCE
Confidence 4555666677777776 788899999999999999999987 3 79999999999999999998876652 389
Q ss_pred EEEeCCCCCCCCCCCCccEEEEccCCCC-chHHHHHhcCCCcEEEEEeCC
Q 028002 128 SVHVGDGRKGWPEFAPYDAIHVGAAAPE-IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 128 ~~~~~d~~~~~~~~~~~D~V~~~~~~~~-~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+++.+|+.+.......||+|+++..... +++.+.++|||||++++....
T Consensus 107 ~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 107 RAVQGTAPAALADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp EEEESCTTGGGTTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred EEEeCchhhhcccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999999875544468999999876543 778899999999999998765
No 12
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.73 E-value=6.6e-17 Score=119.62 Aligned_cols=120 Identities=22% Similarity=0.288 Sum_probs=97.2
Q ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe
Q 028002 48 TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL 127 (215)
Q Consensus 48 ~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v 127 (215)
.++.+.+...+++.+. ..++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...+.. .++
T Consensus 7 ~~t~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~ 78 (178)
T 3hm2_A 7 QLTKQHVRALAISALA--PKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVS-----DRI 78 (178)
T ss_dssp CSHHHHHHHHHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCT-----TSE
T ss_pred cccHHHHHHHHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCC-----CCE
Confidence 3455556677777775 7788899999999999999999885 4589999999999999999998876542 378
Q ss_pred EEEeCCCCCCCCCC-CCccEEEEccCCCC--chHHHHHhcCCCcEEEEEeCC
Q 028002 128 SVHVGDGRKGWPEF-APYDAIHVGAAAPE--IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 128 ~~~~~d~~~~~~~~-~~~D~V~~~~~~~~--~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
++.+|..+.++.. ++||+|++...+++ +++.+.++|+|||++++....
T Consensus 79 -~~~~d~~~~~~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 79 -AVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp -EEECCTTGGGGGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECS
T ss_pred -EEecchHhhhhccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeec
Confidence 8888876544433 78999999998876 788999999999999997654
No 13
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.73 E-value=5e-17 Score=132.53 Aligned_cols=161 Identities=19% Similarity=0.249 Sum_probs=122.0
Q ss_pred HHHHHHHhCcCcCCCCCC-------CCCCcCCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHH
Q 028002 15 KVSEVMETIDRACFVPDG-------TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFA 87 (215)
Q Consensus 15 ~~~~~~~~~~r~~~~~~~-------~~~y~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~ 87 (215)
....++...+++.|.+.. ...|.+....+..+..+..|.....++..+. +.++.+|||+|||+|.++..++
T Consensus 47 ~~~~~ig~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la 124 (336)
T 2b25_A 47 PFGKIVGKFPGQILRSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLS 124 (336)
T ss_dssp BHHHHTTCCTTEEEECTTSCEEEEECCCHHHHHHHSCCSSCCCCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHH
T ss_pred eHHHHcCCCCCceEEeCCCcEEEecCCCHHHHhhhhcCCCcccCHHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHH
Confidence 355667777777776654 3345555556777777888887888888886 8889999999999999999999
Q ss_pred HHhCCCCeEEEEecChHHHHHHHHHHHhhcc---cCcc--cCCCeEEEeCCCCCCCC--CCCCccEEEEccCCCC-chHH
Q 028002 88 LMVGPQGRAVGVEHIPELVVSSIQNIEKSAA---APLL--KEGSLSVHVGDGRKGWP--EFAPYDAIHVGAAAPE-IPQA 159 (215)
Q Consensus 88 ~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~---~~~~--~~~~v~~~~~d~~~~~~--~~~~~D~V~~~~~~~~-~~~~ 159 (215)
+.+++..+++++|+++.+++.|++++...+. .+.+ ...++++..+|+.+... ..++||+|+++...+. +++.
T Consensus 125 ~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~ 204 (336)
T 2b25_A 125 KAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPV 204 (336)
T ss_dssp HHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSSSTTTTHHH
T ss_pred HHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCCCHHHHHHH
Confidence 9877778999999999999999999876430 0000 01589999999887532 3357999999876554 5789
Q ss_pred HHHhcCCCcEEEEEeCCC
Q 028002 160 LIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 160 ~~~~Lk~gG~lv~~~~~~ 177 (215)
+.++|+|||.|++..++.
T Consensus 205 ~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 205 FYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp HGGGEEEEEEEEEEESSH
T ss_pred HHHhcCCCcEEEEEeCCH
Confidence 999999999999987753
No 14
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.72 E-value=6.9e-17 Score=126.41 Aligned_cols=116 Identities=23% Similarity=0.256 Sum_probs=96.1
Q ss_pred chhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEE
Q 028002 50 SAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSV 129 (215)
Q Consensus 50 ~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~ 129 (215)
..+.....+++.+. +.++.+|||+|||+|..+..+++..+ .+++++|+++.+++.+++++...+.. .++.+
T Consensus 20 ~~~~~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~-----~~v~~ 90 (256)
T 1nkv_A 20 FTEEKYATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVS-----ERVHF 90 (256)
T ss_dssp CCHHHHHHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEE
T ss_pred CCHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCC-----cceEE
Confidence 34445667777765 77889999999999999999998863 68999999999999999998876653 57999
Q ss_pred EeCCCCCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeC
Q 028002 130 HVGDGRKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 130 ~~~d~~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~ 175 (215)
..+|+.+... .++||+|++...++++ ++++.++|||||++++..+
T Consensus 91 ~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 91 IHNDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp EESCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred EECChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 9999987655 5889999998776554 5788999999999999654
No 15
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.71 E-value=2.9e-16 Score=122.97 Aligned_cols=121 Identities=26% Similarity=0.376 Sum_probs=100.8
Q ss_pred cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeE
Q 028002 49 ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
+.+|.....++..+. ..++.+|||+|||+|.++..+++.+++..+++++|+++.+++.|++++...+.. ++++
T Consensus 76 ~~~~~~~~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~-----~~v~ 148 (255)
T 3mb5_A 76 IVHPKDAALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD-----DRVT 148 (255)
T ss_dssp CCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT-----TTEE
T ss_pred cccHhHHHHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC-----CceE
Confidence 345555666667665 788899999999999999999998766789999999999999999999887653 4599
Q ss_pred EEeCCCCCCCCCCCCccEEEEccCCC-CchHHHHHhcCCCcEEEEEeCCC
Q 028002 129 VHVGDGRKGWPEFAPYDAIHVGAAAP-EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 129 ~~~~d~~~~~~~~~~~D~V~~~~~~~-~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+..+|+.+..+. ++||+|+++.+.. .+++.+.++|+|||.+++..+..
T Consensus 149 ~~~~d~~~~~~~-~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 149 IKLKDIYEGIEE-ENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp EECSCGGGCCCC-CSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred EEECchhhccCC-CCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 999999876544 7899999987665 37899999999999999987653
No 16
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.70 E-value=1.6e-16 Score=119.69 Aligned_cols=105 Identities=17% Similarity=0.222 Sum_probs=88.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC-CCCCCc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW-PEFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~ 144 (215)
+.++.+|||+|||+|..+..+++.+++.++++++|+++.+++.+++++...+.. .+++++.+|+.... ...++|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI-----DRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG-----GGEEEECSCGGGGGGTCCSCE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CCeEEEECCHHHHhhhccCCc
Confidence 788899999999999999999998766679999999999999999999886543 58999999986643 223789
Q ss_pred cEEEEccCC---------------CCchHHHHHhcCCCcEEEEEeC
Q 028002 145 DAIHVGAAA---------------PEIPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 145 D~V~~~~~~---------------~~~~~~~~~~Lk~gG~lv~~~~ 175 (215)
|+|+++.++ ..+++.+.++|||||++++...
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 999988754 1356788999999999998763
No 17
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.69 E-value=2.9e-16 Score=120.04 Aligned_cols=112 Identities=23% Similarity=0.296 Sum_probs=94.5
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+. ..++.+|||+|||+|..+..+++..++..+++++|+++.+++.+++++...+. .++.+..+|+
T Consensus 26 ~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~ 97 (219)
T 3dh0_A 26 PEKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------KNVEVLKSEE 97 (219)
T ss_dssp HHHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECBT
T ss_pred HHHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeccc
Confidence 356666665 77889999999999999999999876667999999999999999999887654 4799999999
Q ss_pred CCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEe
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~ 174 (215)
.......++||+|++...++++ ++++.++|+|||++++..
T Consensus 98 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 98 NKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp TBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 8765555789999999887654 467889999999999975
No 18
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.68 E-value=3.2e-16 Score=122.68 Aligned_cols=114 Identities=22% Similarity=0.243 Sum_probs=94.1
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
....++..+. .+.++.+|||+|||+|..+..+++.. + .+++++|+++.+++.+++++...+.. .+++++.+|
T Consensus 33 ~~~~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~~d 104 (257)
T 3f4k_A 33 ATRKAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYV-K-GQITGIDLFPDFIEIFNENAVKANCA-----DRVKGITGS 104 (257)
T ss_dssp HHHHHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHC-C-SEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEECC
T ss_pred HHHHHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHcCCC-----CceEEEECC
Confidence 3455555553 36778899999999999999999985 3 49999999999999999999887654 469999999
Q ss_pred CCCCCCCCCCccEEEEccCCCCc-----hHHHHHhcCCCcEEEEEeC
Q 028002 134 GRKGWPEFAPYDAIHVGAAAPEI-----PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~~~-----~~~~~~~Lk~gG~lv~~~~ 175 (215)
+.......++||+|++...++++ ++.+.++|||||++++..+
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 97655455799999999888764 4678899999999999764
No 19
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.68 E-value=4.1e-16 Score=123.72 Aligned_cols=127 Identities=21% Similarity=0.306 Sum_probs=103.5
Q ss_pred cCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh-c-ccCc
Q 028002 44 GYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS-A-AAPL 121 (215)
Q Consensus 44 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~-~~~~ 121 (215)
..+..+.+|.....++..+. ..++.+|||+|||+|.++..+++.+++..+++++|+++.+++.+++++... + ..
T Consensus 77 ~~~~~~~~~~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~-- 152 (280)
T 1i9g_A 77 PRGPQVIYPKDAAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP-- 152 (280)
T ss_dssp CSCSCCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC--
T ss_pred cccceeecHHHHHHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC--
Confidence 33444556666777777776 788899999999999999999997666689999999999999999998775 3 21
Q ss_pred ccCCCeEEEeCCCCCCCCCCCCccEEEEccCCC-CchHHHHHhcCCCcEEEEEeCCC
Q 028002 122 LKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAP-EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 122 ~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~-~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
.++.+..+|+.+.....++||+|+++.... .+++.+.++|+|||++++.+++.
T Consensus 153 ---~~v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 153 ---DNWRLVVSDLADSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp ---TTEEEECSCGGGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred ---CcEEEEECchHhcCCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 589999999877644447899999976654 67789999999999999988763
No 20
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.68 E-value=7.5e-16 Score=123.63 Aligned_cols=108 Identities=19% Similarity=0.187 Sum_probs=90.2
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+. +.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...+.. .++++..+|+.
T Consensus 62 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~ 132 (302)
T 3hem_A 62 KLALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSP-----RRKEVRIQGWE 132 (302)
T ss_dssp HHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCS-----SCEEEEECCGG
T ss_pred HHHHHHcC--CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCC-----CceEEEECCHH
Confidence 33444443 67889999999999999999999864 78999999999999999998876653 58999999987
Q ss_pred CCCCCCCCccEEEEccCCCCc---------------hHHHHHhcCCCcEEEEEeC
Q 028002 136 KGWPEFAPYDAIHVGAAAPEI---------------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~~~---------------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+. .++||+|++...++++ ++++.++|||||++++...
T Consensus 133 ~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 133 EF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred Hc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 65 3899999999887666 4678899999999998654
No 21
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=8e-16 Score=115.23 Aligned_cols=121 Identities=16% Similarity=0.113 Sum_probs=92.6
Q ss_pred cchhHHHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe
Q 028002 49 ISAPHMHATCLQLLEEN-LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL 127 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v 127 (215)
.+...+...+++.+... ..++.+|||+|||+|.++..+++. +. .+|+++|+|+.+++.+++++...+. .++
T Consensus 24 p~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~------~~v 95 (189)
T 3p9n_A 24 PTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-GA-ASVLFVESDQRSAAVIARNIEALGL------SGA 95 (189)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEECCHHHHHHHHHHHHHHTC------SCE
T ss_pred cCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-CC-CeEEEEECCHHHHHHHHHHHHHcCC------Cce
Confidence 34444566666666522 156789999999999999988775 32 6899999999999999999987654 589
Q ss_pred EEEeCCCCCCCC--CCCCccEEEEccCCCCc-------hHHHHH--hcCCCcEEEEEeCCC
Q 028002 128 SVHVGDGRKGWP--EFAPYDAIHVGAAAPEI-------PQALID--QLKPGGRMVIPVGNI 177 (215)
Q Consensus 128 ~~~~~d~~~~~~--~~~~~D~V~~~~~~~~~-------~~~~~~--~Lk~gG~lv~~~~~~ 177 (215)
+++++|+.+... ..++||+|+++.++... ++.+.+ +|+|||.+++..+..
T Consensus 96 ~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 96 TLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp EEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred EEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 999999876431 23789999999887763 245667 999999999987543
No 22
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.68 E-value=3.9e-16 Score=122.22 Aligned_cols=122 Identities=28% Similarity=0.403 Sum_probs=100.7
Q ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh-cccCcccCCC
Q 028002 48 TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS-AAAPLLKEGS 126 (215)
Q Consensus 48 ~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~ 126 (215)
....+.....++..+. ..++.+|||+|||+|.++..+++.+++..+++++|+++.+++.+++++... +. .+
T Consensus 78 ~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~------~~ 149 (258)
T 2pwy_A 78 TPTYPKDASAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV------EN 149 (258)
T ss_dssp CCCCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC------CC
T ss_pred ccccchHHHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC------CC
Confidence 3445555667777765 788899999999999999999998766689999999999999999998775 42 58
Q ss_pred eEEEeCCCCCCCCCCCCccEEEEccCCC-CchHHHHHhcCCCcEEEEEeCCC
Q 028002 127 LSVHVGDGRKGWPEFAPYDAIHVGAAAP-EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 127 v~~~~~d~~~~~~~~~~~D~V~~~~~~~-~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+.+..+|+.+.....++||+|+++.+.. .+++.+.++|+|||.+++..++.
T Consensus 150 v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 150 VRFHLGKLEEAELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp EEEEESCGGGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred EEEEECchhhcCCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 9999999887633337899999976654 67899999999999999988764
No 23
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.67 E-value=5.3e-16 Score=115.68 Aligned_cols=109 Identities=17% Similarity=0.210 Sum_probs=84.2
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC
Q 028002 58 CLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG 137 (215)
Q Consensus 58 ~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 137 (215)
....+...+.++.+|||+|||+|..+..+++. + .+|+++|+|+.+++.|++++...+. .+++++.++....
T Consensus 12 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~--~~v~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~~~~~l 82 (185)
T 3mti_A 12 SHDFLAEVLDDESIVVDATMGNGNDTAFLAGL-S--KKVYAFDVQEQALGKTSQRLSDLGI------ENTELILDGHENL 82 (185)
T ss_dssp HHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT-S--SEEEEEESCHHHHHHHHHHHHHHTC------CCEEEEESCGGGG
T ss_pred HHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh-C--CEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCcHHHH
Confidence 33444445778999999999999999999987 3 8999999999999999999987654 5889998766542
Q ss_pred --CCCCCCccEEEEccC-CCC--------------chHHHHHhcCCCcEEEEEeCC
Q 028002 138 --WPEFAPYDAIHVGAA-APE--------------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 138 --~~~~~~~D~V~~~~~-~~~--------------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.. .++||+|+++.. ++. .++++.++|||||.+++.+..
T Consensus 83 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 83 DHYV-REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp GGTC-CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred Hhhc-cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 23 378999988732 221 236788999999999987643
No 24
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.67 E-value=5e-16 Score=121.92 Aligned_cols=109 Identities=20% Similarity=0.257 Sum_probs=90.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+. ..++.+|||+|||+|.++..+++.. .+++++|+|+.+++.+++++...+. .++.++.+|+
T Consensus 26 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~ 94 (260)
T 1vl5_A 26 LAKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGH------QQVEYVQGDA 94 (260)
T ss_dssp HHHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCC
T ss_pred HHHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEecH
Confidence 466677765 6788999999999999999999875 5999999999999999998877553 4799999999
Q ss_pred CCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEe
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~ 174 (215)
.......++||+|++...++++ ++++.++|||||++++..
T Consensus 95 ~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 95 EQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp -CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 8755455799999999887654 467899999999999863
No 25
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.67 E-value=9.3e-16 Score=117.25 Aligned_cols=118 Identities=15% Similarity=0.121 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
....+++.+. ..++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++...+... ....++++..+|
T Consensus 17 ~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~~~d 92 (217)
T 3jwh_A 17 RMNGVVAALK--QSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPR-NQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCH-HHHTTEEEEECC
T ss_pred HHHHHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCc-ccCcceEEEeCC
Confidence 4556666665 5677899999999999999999874 54799999999999999999886544310 001279999999
Q ss_pred CCCCCCCCCCccEEEEccCCCCch--------HHHHHhcCCCcEEEEEeC
Q 028002 134 GRKGWPEFAPYDAIHVGAAAPEIP--------QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~ 175 (215)
+.......++||+|++...++++. +++.++|||||.++++.+
T Consensus 93 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 93 LTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp TTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 865444447899999998876544 467899999997776543
No 26
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.67 E-value=1.2e-16 Score=125.52 Aligned_cols=102 Identities=18% Similarity=0.125 Sum_probs=83.1
Q ss_pred HHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC
Q 028002 59 LQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW 138 (215)
Q Consensus 59 l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 138 (215)
++.+......+.+|||+|||+|..+..+++.+ .+|+|+|+|+.|++.|++ ..++.++++++.+..
T Consensus 30 ~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~------------~~~v~~~~~~~e~~~ 94 (257)
T 4hg2_A 30 FRWLGEVAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR------------HPRVTYAVAPAEDTG 94 (257)
T ss_dssp HHHHHHHSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC------------CTTEEEEECCTTCCC
T ss_pred HHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh------------cCCceeehhhhhhhc
Confidence 34444345566899999999999999999874 789999999999987653 158999999998876
Q ss_pred CCCCCccEEEEccCCCCc-----hHHHHHhcCCCcEEEEEeC
Q 028002 139 PEFAPYDAIHVGAAAPEI-----PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~~~-----~~~~~~~Lk~gG~lv~~~~ 175 (215)
...++||+|++...++++ +.++.++|||||.|++...
T Consensus 95 ~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp CCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence 666899999999988763 3678999999999988653
No 27
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.67 E-value=4.7e-16 Score=122.63 Aligned_cols=113 Identities=22% Similarity=0.215 Sum_probs=92.9
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...++..+. .+.++.+|||+|||+|..+..+++. +..+++++|+|+.+++.+++++...+.. ++++++.+|+
T Consensus 34 ~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~ 105 (267)
T 3kkz_A 34 TLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQ-----NRVTGIVGSM 105 (267)
T ss_dssp HHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEECCT
T ss_pred HHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCC-----cCcEEEEcCh
Confidence 444555543 3577899999999999999999987 3369999999999999999999887654 5799999999
Q ss_pred CCCCCCCCCccEEEEccCCCCc-----hHHHHHhcCCCcEEEEEeC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEI-----PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~-----~~~~~~~Lk~gG~lv~~~~ 175 (215)
.+.....++||+|++...++++ ++.+.++|||||++++..+
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8765455799999999887654 4678899999999999764
No 28
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.67 E-value=2.2e-16 Score=119.84 Aligned_cols=113 Identities=15% Similarity=0.042 Sum_probs=83.7
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhccc------CcccCCCeE
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAA------PLLKEGSLS 128 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~------~~~~~~~v~ 128 (215)
+..++..+. +.++.+|||+|||+|..+..+++. | .+|+|+|+|+.+++.|+++....... ......+++
T Consensus 11 l~~~~~~l~--~~~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 11 LQQYWSSLN--VVPGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp HHHHHHHHC--CCTTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred HHHHHHhcc--cCCCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 344455554 667899999999999999999988 4 68999999999999998875421000 000125789
Q ss_pred EEeCCCCCCCCCC-CCccEEEEccCCCCc--------hHHHHHhcCCCcEEEE
Q 028002 129 VHVGDGRKGWPEF-APYDAIHVGAAAPEI--------PQALIDQLKPGGRMVI 172 (215)
Q Consensus 129 ~~~~d~~~~~~~~-~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~ 172 (215)
++++|+.+..... ++||+|++...+.++ ++++.++|||||++++
T Consensus 86 ~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 86 IWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp EEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred EEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 9999998765443 689999988776554 3568899999998444
No 29
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.67 E-value=8e-16 Score=119.47 Aligned_cols=112 Identities=21% Similarity=0.266 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC
Q 028002 53 HMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG 132 (215)
Q Consensus 53 ~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~ 132 (215)
.....+++.+. +.++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++...+. .++.++.+
T Consensus 8 ~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~ 76 (239)
T 1xxl_A 8 HSLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGV------ENVRFQQG 76 (239)
T ss_dssp HHHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTC------CSEEEEEC
T ss_pred CCcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC------CCeEEEec
Confidence 34667777776 8889999999999999999998874 5899999999999999999877654 47999999
Q ss_pred CCCCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeC
Q 028002 133 DGRKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 133 d~~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~ 175 (215)
|+.......++||+|++...++++ +.++.++|||||++++...
T Consensus 77 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 77 TAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 987755455789999999877553 4678999999999999643
No 30
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.67 E-value=1.1e-15 Score=122.13 Aligned_cols=115 Identities=21% Similarity=0.111 Sum_probs=93.9
Q ss_pred HHHHHHHHHH--hcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe
Q 028002 54 MHATCLQLLE--ENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV 131 (215)
Q Consensus 54 ~~~~~l~~l~--~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~ 131 (215)
....++..+. ..+.++.+|||+|||+|..+..+++..+ .+++++|+++.+++.+++++...+.. .++.++.
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~~~~~~ 138 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLA-----DNITVKY 138 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCT-----TTEEEEE
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCC-----cceEEEE
Confidence 3455666651 0267889999999999999999998863 58999999999999999998776653 5799999
Q ss_pred CCCCCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeC
Q 028002 132 GDGRKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 132 ~d~~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+|+.......++||+|++...++++ ++++.++|||||++++..+
T Consensus 139 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 139 GSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp CCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9998765555789999999887654 5688999999999999754
No 31
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.67 E-value=1.4e-15 Score=120.09 Aligned_cols=111 Identities=21% Similarity=0.256 Sum_probs=91.3
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+. +.++.+|||+|||+|..+..+++..+ .+++++|+|+.+++.+++++...+.. +++.+..+|+.
T Consensus 51 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~~~~~~~d~~ 121 (273)
T 3bus_A 51 DEMIALLD--VRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAGLA-----NRVTFSYADAM 121 (273)
T ss_dssp HHHHHHSC--CCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEECCTT
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcCCC-----cceEEEECccc
Confidence 34444443 56789999999999999999998753 79999999999999999998876543 57999999998
Q ss_pred CCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeC
Q 028002 136 KGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~ 175 (215)
......++||+|++...++++ ++++.++|||||++++...
T Consensus 122 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 122 DLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp SCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 765555789999999988765 3678899999999998753
No 32
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.67 E-value=1.6e-15 Score=120.50 Aligned_cols=104 Identities=22% Similarity=0.172 Sum_probs=85.0
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
.+.++.+|||+|||+|.++..++... +..+|+++|+++.+++.|++++...+. .+++++.+|+.+. + .++|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl------~~v~~v~gDa~~l-~-d~~F 189 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGV------DGVNVITGDETVI-D-GLEF 189 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTC------CSEEEEESCGGGG-G-GCCC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCC------CCeEEEECchhhC-C-CCCc
Confidence 37889999999999987765544332 347999999999999999999987654 5899999998774 3 4789
Q ss_pred cEEEEccCCC---CchHHHHHhcCCCcEEEEEeCCC
Q 028002 145 DAIHVGAAAP---EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 145 D~V~~~~~~~---~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|+|++..... .+++++.++|||||+|++...+.
T Consensus 190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~~ 225 (298)
T 3fpf_A 190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYTG 225 (298)
T ss_dssp SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECCG
T ss_pred CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCcc
Confidence 9999877654 46788999999999999976544
No 33
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.66 E-value=1.1e-15 Score=116.95 Aligned_cols=120 Identities=15% Similarity=0.181 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe
Q 028002 52 PHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV 131 (215)
Q Consensus 52 ~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~ 131 (215)
+.....+++.+. ..++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.+++++...+... ....++++..
T Consensus 15 ~~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~~ 90 (219)
T 3jwg_A 15 QQRLGTVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPE-MQRKRISLFQ 90 (219)
T ss_dssp HHHHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCH-HHHTTEEEEE
T ss_pred HHHHHHHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhcccc-ccCcceEEEe
Confidence 334555666665 4667899999999999999999874 55799999999999999999887654320 0012799999
Q ss_pred CCCCCCCCCCCCccEEEEccCCCCch--------HHHHHhcCCCcEEEEEeC
Q 028002 132 GDGRKGWPEFAPYDAIHVGAAAPEIP--------QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 132 ~d~~~~~~~~~~~D~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~ 175 (215)
+|+.......++||+|++...++++. +++.++|||||.++.+..
T Consensus 91 ~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 91 SSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp CCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 99865544447899999998876654 457899999996665433
No 34
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.66 E-value=2.6e-15 Score=114.63 Aligned_cols=103 Identities=15% Similarity=0.207 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC--CCCCCc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW--PEFAPY 144 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~ 144 (215)
.++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.|++++...+. .++.++.+|+.... ...++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~ 112 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGV------PNIKLLWVDGSDLTDYFEDGEI 112 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCC------SSEEEEECCSSCGGGTSCTTCC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCCCCC
Confidence 457899999999999999999984 568999999999999999999887654 58999999987633 334789
Q ss_pred cEEEEccCCC--------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 145 DAIHVGAAAP--------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 145 D~V~~~~~~~--------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+|+++.+.+ .+++.+.++|+|||.+++.+.+
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9999987754 3667889999999999998865
No 35
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.66 E-value=8.9e-16 Score=118.29 Aligned_cols=102 Identities=24% Similarity=0.386 Sum_probs=85.2
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC---CCCC
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG---WPEF 141 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~ 141 (215)
.++||++|||+|||+|..+..+++..|+.++|+++|+++.+++.+++++... .++..+.++.... ....
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--------~ni~~V~~d~~~p~~~~~~~ 145 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--------RNIFPILGDARFPEKYRHLV 145 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--------TTEEEEESCTTCGGGGTTTC
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--------cCeeEEEEeccCcccccccc
Confidence 3799999999999999999999999999999999999999999998876442 5888898887642 2233
Q ss_pred CCccEEEEccCCCC----chHHHHHhcCCCcEEEEEe
Q 028002 142 APYDAIHVGAAAPE----IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 142 ~~~D~V~~~~~~~~----~~~~~~~~Lk~gG~lv~~~ 174 (215)
+.+|+|+++...+. ++.++.+.|||||.+++++
T Consensus 146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 146 EGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 68999998877664 4467789999999999864
No 36
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.66 E-value=1.1e-15 Score=116.36 Aligned_cols=113 Identities=19% Similarity=0.209 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe
Q 028002 52 PHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV 131 (215)
Q Consensus 52 ~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~ 131 (215)
+.+...+++.+. ..++ +|||+|||+|..+..+++. +..+++++|+++.+++.+++++...+.. .++++..
T Consensus 30 ~~~~~~~~~~~~--~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~-----~~~~~~~ 99 (219)
T 3dlc_A 30 PIIAENIINRFG--ITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLN-----DRIQIVQ 99 (219)
T ss_dssp HHHHHHHHHHHC--CCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEE
T ss_pred HHHHHHHHHhcC--CCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhcccc-----CceEEEE
Confidence 334555555554 4555 9999999999999999987 2379999999999999999998876653 5899999
Q ss_pred CCCCCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEe
Q 028002 132 GDGRKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 132 ~d~~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~ 174 (215)
+|+.......++||+|++...++++ ++++.++|+|||.+++..
T Consensus 100 ~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 100 GDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 9998755555799999999887653 467899999999999974
No 37
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.64 E-value=3e-15 Score=118.75 Aligned_cols=119 Identities=24% Similarity=0.370 Sum_probs=98.4
Q ss_pred hhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE
Q 028002 51 APHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH 130 (215)
Q Consensus 51 ~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~ 130 (215)
.|.....++..+. +.++.+|||+|||+|.++..+++.+++..+++++|+++.+++.+++++...+.. .++.+.
T Consensus 97 ~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~v~~~ 169 (277)
T 1o54_A 97 YPKDSSFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI-----ERVTIK 169 (277)
T ss_dssp CHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG-----GGEEEE
T ss_pred CHHHHHHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-----CCEEEE
Confidence 3444556666665 778899999999999999999998666689999999999999999998876543 478999
Q ss_pred eCCCCCCCCCCCCccEEEEccCCC-CchHHHHHhcCCCcEEEEEeCCC
Q 028002 131 VGDGRKGWPEFAPYDAIHVGAAAP-EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 131 ~~d~~~~~~~~~~~D~V~~~~~~~-~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
.+|+.+..+. +.||+|+++.+.. .+++.+.++|+|||++++..+..
T Consensus 170 ~~d~~~~~~~-~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 170 VRDISEGFDE-KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp CCCGGGCCSC-CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred ECCHHHcccC-CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9998776443 6899999987655 67789999999999999988753
No 38
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.64 E-value=1.3e-15 Score=117.94 Aligned_cols=114 Identities=18% Similarity=0.227 Sum_probs=91.0
Q ss_pred hhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE
Q 028002 51 APHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH 130 (215)
Q Consensus 51 ~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~ 130 (215)
.+.....+...+. ..++.+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++...+.. ++++++
T Consensus 56 ~~~~~~~l~~~~~--~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~v~~~ 127 (232)
T 3ntv_A 56 DRLTLDLIKQLIR--MNNVKNILEIGTAIGYSSMQFASI-SDDIHVTTIERNETMIQYAKQNLATYHFE-----NQVRII 127 (232)
T ss_dssp CHHHHHHHHHHHH--HHTCCEEEEECCSSSHHHHHHHTT-CTTCEEEEEECCHHHHHHHHHHHHHTTCT-----TTEEEE
T ss_pred CHHHHHHHHHHHh--hcCCCEEEEEeCchhHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEE
Confidence 4444444444444 456789999999999999999985 35589999999999999999999887653 589999
Q ss_pred eCCCCCCCC-C-CCCccEEEEccCCCCc---hHHHHHhcCCCcEEEE
Q 028002 131 VGDGRKGWP-E-FAPYDAIHVGAAAPEI---PQALIDQLKPGGRMVI 172 (215)
Q Consensus 131 ~~d~~~~~~-~-~~~~D~V~~~~~~~~~---~~~~~~~Lk~gG~lv~ 172 (215)
.+|+.+..+ . .++||+|+++...... ++.+.++|+|||+|++
T Consensus 128 ~~d~~~~~~~~~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 128 EGNALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ESCGGGCHHHHTTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEE
T ss_pred ECCHHHHHHhhccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 999977544 1 3789999999877654 4677899999999988
No 39
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.64 E-value=2.1e-15 Score=119.58 Aligned_cols=112 Identities=21% Similarity=0.337 Sum_probs=90.0
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh-cccCcccCCCeEEEeCCCC
Q 028002 57 TCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS-AAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 57 ~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~v~~~~~d~~ 135 (215)
.++..+. ..++.+|||+|||+|..+..+++.+++..+++++|+++.+++.+++++... +. .++++..+|+.
T Consensus 101 ~~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~------~~v~~~~~d~~ 172 (275)
T 1yb2_A 101 YIIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI------GNVRTSRSDIA 172 (275)
T ss_dssp -----CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC------TTEEEECSCTT
T ss_pred HHHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC------CcEEEEECchh
Confidence 3444443 677899999999999999999988555589999999999999999998765 42 58999999998
Q ss_pred CCCCCCCCccEEEEccCCC-CchHHHHHhcCCCcEEEEEeCCC
Q 028002 136 KGWPEFAPYDAIHVGAAAP-EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~-~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+..+. ++||+|+++.+.. .+++.+.+.|+|||++++.+++.
T Consensus 173 ~~~~~-~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 173 DFISD-QMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp TCCCS-CCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ccCcC-CCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 74443 7899999966543 57789999999999999988764
No 40
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.64 E-value=3e-15 Score=119.16 Aligned_cols=101 Identities=22% Similarity=0.135 Sum_probs=84.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
+.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...+.. .++.+..+|+.... ++||
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~-----~~~~~~~~d~~~~~---~~fD 131 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENL-----RSKRVLLAGWEQFD---EPVD 131 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCC-----SCEEEEESCGGGCC---CCCS
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCC-----CCeEEEECChhhCC---CCee
Confidence 56788999999999999999997654 59999999999999999988765543 58999999986542 7899
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++...++++ ++++.++|||||++++..+.
T Consensus 132 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 132 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999877655 36788999999999997644
No 41
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.64 E-value=4.2e-15 Score=121.97 Aligned_cols=123 Identities=20% Similarity=0.196 Sum_probs=99.1
Q ss_pred cccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCC
Q 028002 47 ATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGS 126 (215)
Q Consensus 47 ~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~ 126 (215)
.....+.+...++.... ..++.+|||+|||+|.++..++...++..+++|+|+++.+++.|++++...+. .+
T Consensus 184 ~a~l~~~la~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~------~~ 255 (354)
T 3tma_A 184 RGSLTPVLAQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL------SW 255 (354)
T ss_dssp SCSCCHHHHHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC------TT
T ss_pred CCCcCHHHHHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC------Cc
Confidence 33445555566666654 67789999999999999999999865668999999999999999999988664 37
Q ss_pred eEEEeCCCCCCCCCCCCccEEEEccCCCC--------------chHHHHHhcCCCcEEEEEeCCC
Q 028002 127 LSVHVGDGRKGWPEFAPYDAIHVGAAAPE--------------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 127 v~~~~~d~~~~~~~~~~~D~V~~~~~~~~--------------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+++.++|+.+.....+.||+|++++++.. +.+.+.++|+|||.+++.+++.
T Consensus 256 i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 256 IRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp CEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred eEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 99999999876554467999999987632 3356788999999999998875
No 42
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.63 E-value=2e-15 Score=118.30 Aligned_cols=104 Identities=17% Similarity=0.064 Sum_probs=79.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhc------ccCc-----ccCCCeEEEeCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSA------AAPL-----LKEGSLSVHVGDG 134 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~------~~~~-----~~~~~v~~~~~d~ 134 (215)
..++.+|||+|||+|..+..+++. | .+|+|+|+|+.+++.|+++..... .... -...++++.++|+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~-G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR-G--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT-T--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC-C--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 357789999999999999999987 4 689999999999999977643100 0000 0115799999999
Q ss_pred CCCCCCC-CCccEEEEccCCCCc--------hHHHHHhcCCCcEEEE
Q 028002 135 RKGWPEF-APYDAIHVGAAAPEI--------PQALIDQLKPGGRMVI 172 (215)
Q Consensus 135 ~~~~~~~-~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~ 172 (215)
.+..... ++||+|++...+.++ ++++.++|||||++++
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 8765432 789999988777554 3568899999999964
No 43
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.63 E-value=3.5e-15 Score=114.08 Aligned_cols=106 Identities=23% Similarity=0.196 Sum_probs=87.9
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+. ..++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++. .++.+..+|+
T Consensus 34 ~~~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~d~ 98 (220)
T 3hnr_A 34 YEDILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA-G--RTVYGIEPSREMRMIAKEKLP----------KEFSITEGDF 98 (220)
T ss_dssp HHHHHHHHH--HTCCSEEEEECCTTSHHHHHHHHT-T--CEEEEECSCHHHHHHHHHHSC----------TTCCEESCCS
T ss_pred HHHHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC-C--CeEEEEeCCHHHHHHHHHhCC----------CceEEEeCCh
Confidence 356667665 557889999999999999999987 3 799999999999999987653 3788999999
Q ss_pred CCCCCCCCCccEEEEccCCCC--------chHHHHHhcCCCcEEEEEeCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPE--------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~--------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
...... ++||+|++...+++ +++++.++|||||.+++..+.
T Consensus 99 ~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 99 LSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp SSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred hhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 876555 89999999988765 446788999999999998543
No 44
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.63 E-value=9.3e-16 Score=120.37 Aligned_cols=109 Identities=21% Similarity=0.192 Sum_probs=89.7
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+. ..++.+|||+|||+|..+..+++.++ .+|+++|+|+.+++.+++++... .+++++.+|+
T Consensus 44 ~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~ 111 (266)
T 3ujc_A 44 TKKILSDIE--LNENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVSGN--------NKIIFEANDI 111 (266)
T ss_dssp HHHHTTTCC--CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCCSC--------TTEEEEECCT
T ss_pred HHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhhcC--------CCeEEEECcc
Confidence 444455443 67788999999999999999999863 79999999999999998765431 5899999999
Q ss_pred CCCCCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEeC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~ 175 (215)
.......++||+|++...++++ ++++.++|||||.+++..+
T Consensus 112 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8765555899999999988877 4678999999999999754
No 45
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.63 E-value=2e-14 Score=111.81 Aligned_cols=118 Identities=17% Similarity=0.182 Sum_probs=97.0
Q ss_pred chhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEE
Q 028002 50 SAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSV 129 (215)
Q Consensus 50 ~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~ 129 (215)
..|.....++..+. ..++.+|||+|||+|.++..+++. + .+++++|+++.+++.+++++...+.. .++++
T Consensus 75 ~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~~~ 144 (248)
T 2yvl_A 75 IYPKDSFYIALKLN--LNKEKRVLEFGTGSGALLAVLSEV-A--GEVWTFEAVEEFYKTAQKNLKKFNLG-----KNVKF 144 (248)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH-S--SEEEEECSCHHHHHHHHHHHHHTTCC-----TTEEE
T ss_pred ccchhHHHHHHhcC--CCCCCEEEEeCCCccHHHHHHHHh-C--CEEEEEecCHHHHHHHHHHHHHcCCC-----CcEEE
Confidence 34555556666654 678899999999999999999988 3 79999999999999999998776543 57899
Q ss_pred EeCCCCCCCCCCCCccEEEEccCCC-CchHHHHHhcCCCcEEEEEeCCC
Q 028002 130 HVGDGRKGWPEFAPYDAIHVGAAAP-EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 130 ~~~d~~~~~~~~~~~D~V~~~~~~~-~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
..+|+.+.....+.||+|+++.+.. .+++.+.++|+|||.+++.+++.
T Consensus 145 ~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 145 FNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp ECSCTTTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred EEcChhhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9999887652336899999987655 67889999999999999998864
No 46
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.63 E-value=1.3e-15 Score=116.84 Aligned_cols=104 Identities=16% Similarity=0.171 Sum_probs=86.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC---CCCCC
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW---PEFAP 143 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~ 143 (215)
.++.+|||+|||+|..+..+++.. +...|+|+|+++.+++.|++++...+. .++.++.+|+.+.+ ...++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l------~nv~~~~~Da~~~l~~~~~~~~ 105 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGL------SNLRVMCHDAVEVLHKMIPDNS 105 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTC------SSEEEECSCHHHHHHHHSCTTC
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCC------CcEEEEECCHHHHHHHHcCCCC
Confidence 467899999999999999999984 668999999999999999999887654 58999999987641 23479
Q ss_pred ccEEEEccCCC--------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 144 YDAIHVGAAAP--------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 144 ~D~V~~~~~~~--------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
||.|++..+.+ .+++.+.++|||||.|++.+...
T Consensus 106 ~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 106 LRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp EEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred hheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 99999884432 26678899999999999988754
No 47
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.63 E-value=1.5e-15 Score=116.74 Aligned_cols=114 Identities=11% Similarity=0.101 Sum_probs=88.9
Q ss_pred HHHHHHHHHhcC--CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC
Q 028002 55 HATCLQLLEENL--KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG 132 (215)
Q Consensus 55 ~~~~l~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~ 132 (215)
...++..+.... +++.+|||+|||+|..+..+++.+++.++++++|+++.+++.|++++...+.. .++++++.+
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~~i~~~~g 116 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS----PSRVRFLLS 116 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC----GGGEEEECS
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----cCcEEEEEc
Confidence 344445443222 23349999999999999999998766689999999999999999999876641 137999999
Q ss_pred CCCCCCCC--CCCccEEEEccCCCC---chHHHHHhcCCCcEEEE
Q 028002 133 DGRKGWPE--FAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVI 172 (215)
Q Consensus 133 d~~~~~~~--~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~ 172 (215)
|+.+..+. .++||+|+++..... +++.+.++|||||++++
T Consensus 117 da~~~l~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 117 RPLDVMSRLANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence 98654321 378999999987665 45678899999999998
No 48
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.63 E-value=1.1e-15 Score=117.28 Aligned_cols=111 Identities=20% Similarity=0.305 Sum_probs=90.4
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC
Q 028002 60 QLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP 139 (215)
Q Consensus 60 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 139 (215)
+.+...++++.+|||+|||+|.+++.+++. ++..+|+++|+++.+++.|++++..++.. +++++..+|..+..+
T Consensus 7 ~~l~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~-----~~i~~~~~d~l~~l~ 80 (225)
T 3kr9_A 7 ELVASFVSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLK-----EKIQVRLANGLAAFE 80 (225)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT-----TTEEEEECSGGGGCC
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEEECchhhhcc
Confidence 444445788899999999999999999987 56679999999999999999999998865 579999999977665
Q ss_pred CCCCccEEEEccCC----CCchHHHHHhcCCCcEEEEEeCC
Q 028002 140 EFAPYDAIHVGAAA----PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 140 ~~~~~D~V~~~~~~----~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
..++||+|+..+.- ..+++.....|+++|+|++....
T Consensus 81 ~~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 81 ETDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp GGGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred cCcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 42379988765543 44556777899999999996543
No 49
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.63 E-value=4e-15 Score=114.63 Aligned_cols=102 Identities=23% Similarity=0.373 Sum_probs=84.0
Q ss_pred cCCCCCEEEEEcCC-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC--CCCCC
Q 028002 65 NLKPGMHALDIGSG-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK--GWPEF 141 (215)
Q Consensus 65 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~--~~~~~ 141 (215)
.+.++.+|||+||| +|.++..+++.. ..+|+++|+++.+++.|++++...+. +++++.+|+.. ..+.
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-------~v~~~~~d~~~~~~~~~- 121 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-------NVRLVKSNGGIIKGVVE- 121 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-------CCEEEECSSCSSTTTCC-
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-------CcEEEeCCchhhhhccc-
Confidence 36788999999999 999999999885 27999999999999999999887542 78999999643 2333
Q ss_pred CCccEEEEccCCC-------------------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 142 APYDAIHVGAAAP-------------------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 142 ~~~D~V~~~~~~~-------------------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
++||+|+++.++. .+++.+.++|||||++++.++.
T Consensus 122 ~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 122 GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 7899999997752 3456788999999999997654
No 50
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.63 E-value=2.9e-15 Score=123.73 Aligned_cols=114 Identities=19% Similarity=0.211 Sum_probs=91.3
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC
Q 028002 57 TCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK 136 (215)
Q Consensus 57 ~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~ 136 (215)
.+++.+. ..++.+|||+|||+|.++..+++. ++..+|+++|+|+.+++.+++++..++... ..++++..+|+.+
T Consensus 213 ~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~-~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~---~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 213 FFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDK-NPQAKVVFVDESPMAVASSRLNVETNMPEA---LDRCEFMINNALS 286 (375)
T ss_dssp HHHHTCC--CSCCSEEEEETCTTCHHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHCGGG---GGGEEEEECSTTT
T ss_pred HHHHhCc--ccCCCeEEEEeCcchHHHHHHHHH-CCCCEEEEEECcHHHHHHHHHHHHHcCCCc---CceEEEEechhhc
Confidence 3455543 445689999999999999999998 456899999999999999999998876431 1268889999988
Q ss_pred CCCCCCCccEEEEccCCCC-----------chHHHHHhcCCCcEEEEEeCCC
Q 028002 137 GWPEFAPYDAIHVGAAAPE-----------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~~-----------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
..+. ++||+|+++.+++. +++.+.++|||||.+++.++..
T Consensus 287 ~~~~-~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 287 GVEP-FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp TCCT-TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cCCC-CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 6554 78999999988752 4578899999999999987654
No 51
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.63 E-value=3.6e-15 Score=113.98 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC--CCCCCc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW--PEFAPY 144 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~ 144 (215)
.++.+|||+|||+|..+..+++.. +..+++|+|+|+.+++.|++++...+. .++.++.+|+.... ...+.|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~------~nv~~~~~d~~~l~~~~~~~~~ 109 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEA------QNVKLLNIDADTLTDVFEPGEV 109 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCC------SSEEEECCCGGGHHHHCCTTSC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCcCCc
Confidence 456899999999999999999984 568999999999999999999887554 57999999987632 233789
Q ss_pred cEEEEccCCC--------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 145 DAIHVGAAAP--------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 145 D~V~~~~~~~--------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|.|++..+.+ .+++.+.++|+|||.|++.+.+.
T Consensus 110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~ 156 (213)
T 2fca_A 110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR 156 (213)
T ss_dssp CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH
T ss_pred CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9998875432 24678899999999999988653
No 52
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.63 E-value=4.1e-15 Score=113.44 Aligned_cols=100 Identities=20% Similarity=0.161 Sum_probs=78.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC---CCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG---WPEFA 142 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~ 142 (215)
+.++.+|||+|||+|..+..+++.++ .++|+|+|+|+.+++.+.+..... .++.++.+|.... .+..+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--------~~v~~~~~d~~~~~~~~~~~~ 125 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--------NNIIPLLFDASKPWKYSGIVE 125 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--------SSEEEECSCTTCGGGTTTTCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--------CCeEEEEcCCCCchhhccccc
Confidence 56789999999999999999999865 579999999999887666654431 4788888887653 22227
Q ss_pred CccEEEEccCCCC----chHHHHHhcCCCcEEEEEe
Q 028002 143 PYDAIHVGAAAPE----IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 143 ~~D~V~~~~~~~~----~~~~~~~~Lk~gG~lv~~~ 174 (215)
+||+|+++...+. +++++.++|||||.|++.+
T Consensus 126 ~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 126 KVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999854432 2467899999999999985
No 53
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.63 E-value=3.1e-15 Score=120.61 Aligned_cols=103 Identities=17% Similarity=0.078 Sum_probs=87.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.|++++...+.. .+++++.+|+.+.....++||
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~fD 187 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRID-----DHVRSRVCNMLDTPFDKGAVT 187 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEECCTTSCCCCTTCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCC-----CceEEEECChhcCCCCCCCEe
Confidence 45788999999999999999998853 78999999999999999999887653 589999999987654457999
Q ss_pred EEEEccCCCC-----chHHHHHhcCCCcEEEEEeC
Q 028002 146 AIHVGAAAPE-----IPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 146 ~V~~~~~~~~-----~~~~~~~~Lk~gG~lv~~~~ 175 (215)
+|++...+++ +++++.++|||||++++..+
T Consensus 188 ~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 188 ASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999877654 44678899999999998653
No 54
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.62 E-value=5e-15 Score=118.01 Aligned_cols=129 Identities=13% Similarity=0.199 Sum_probs=96.6
Q ss_pred CCCccccCCcccchhH---HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHH
Q 028002 38 DSPMAIGYNATISAPH---MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIE 114 (215)
Q Consensus 38 ~~~~~~~~~~~~~~~~---~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~ 114 (215)
+..+....+..++.|. +...+++.+. ..++.+|||+|||+|.++..+++. +..+++++|+|+.+++.|++++.
T Consensus 92 ~~~~~v~~~~lipr~~te~lv~~~l~~~~--~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~ 167 (284)
T 1nv8_A 92 GLSFLVEEGVFVPRPETEELVELALELIR--KYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAE 167 (284)
T ss_dssp TEEEECCTTSCCCCTTHHHHHHHHHHHHH--HHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEeCCCceecChhHHHHHHHHHHHhc--ccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHH
Confidence 3334444455554443 3444444443 235679999999999999999988 44899999999999999999998
Q ss_pred hhcccCcccCCCeEEEeCCCCCCCCCCCCc---cEEEEccCCC-------------------------CchHHHH-HhcC
Q 028002 115 KSAAAPLLKEGSLSVHVGDGRKGWPEFAPY---DAIHVGAAAP-------------------------EIPQALI-DQLK 165 (215)
Q Consensus 115 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~---D~V~~~~~~~-------------------------~~~~~~~-~~Lk 165 (215)
..+.. ++++++++|+.+... ++| |+|++++++. .+.+.+. +.|+
T Consensus 168 ~~~l~-----~~v~~~~~D~~~~~~--~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~ 240 (284)
T 1nv8_A 168 RHGVS-----DRFFVRKGEFLEPFK--EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDT 240 (284)
T ss_dssp HTTCT-----TSEEEEESSTTGGGG--GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCC
T ss_pred HcCCC-----CceEEEECcchhhcc--cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCC
Confidence 87653 459999999987443 478 9999986542 2456788 9999
Q ss_pred CCcEEEEEeCCC
Q 028002 166 PGGRMVIPVGNI 177 (215)
Q Consensus 166 ~gG~lv~~~~~~ 177 (215)
|||++++.++..
T Consensus 241 pgG~l~~e~~~~ 252 (284)
T 1nv8_A 241 SGKIVLMEIGED 252 (284)
T ss_dssp TTCEEEEECCTT
T ss_pred CCCEEEEEECch
Confidence 999999988764
No 55
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.62 E-value=2.5e-15 Score=119.67 Aligned_cols=115 Identities=17% Similarity=0.207 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC
Q 028002 53 HMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG 132 (215)
Q Consensus 53 ~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~ 132 (215)
.....+++.+. ...++.+|||+|||+|..+..+++.++...+++++|+|+.+++.+++++...+ .++.+..+
T Consensus 8 ~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-------~~v~~~~~ 79 (284)
T 3gu3_A 8 DYVSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-------YDSEFLEG 79 (284)
T ss_dssp HHHHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS-------SEEEEEES
T ss_pred HHHHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC-------CceEEEEc
Confidence 34555555553 35678999999999999999999886434799999999999999999876533 37999999
Q ss_pred CCCCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeCC
Q 028002 133 DGRKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 133 d~~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+.+.... ++||+|++...++++ ++++.++|||||++++..++
T Consensus 80 d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 80 DATEIELN-DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CTTTCCCS-SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred chhhcCcC-CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 99875544 799999999877554 46788999999999998777
No 56
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.62 E-value=5e-15 Score=110.59 Aligned_cols=112 Identities=14% Similarity=0.104 Sum_probs=92.2
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCC--eEEEe
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGS--LSVHV 131 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--v~~~~ 131 (215)
....+++.+. ..++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++...+. .+ +.+..
T Consensus 40 ~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~-~--~~v~~~D~~~~~~~~a~~~~~~~~~------~~~~~~~~~ 108 (194)
T 1dus_A 40 GTKILVENVV--VDKDDDILDLGCGYGVIGIALADE-V--KSTTMADINRRAIKLAKENIKLNNL------DNYDIRVVH 108 (194)
T ss_dssp HHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG-S--SEEEEEESCHHHHHHHHHHHHHTTC------TTSCEEEEE
T ss_pred HHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHcCC------CccceEEEE
Confidence 4566677665 567889999999999999999887 3 7999999999999999999877554 34 99999
Q ss_pred CCCCCCCCCCCCccEEEEccCCCC-------chHHHHHhcCCCcEEEEEeCCC
Q 028002 132 GDGRKGWPEFAPYDAIHVGAAAPE-------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 132 ~d~~~~~~~~~~~D~V~~~~~~~~-------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+|+.+... .++||+|+++.++++ +++.+.++|+|||.+++..++.
T Consensus 109 ~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 109 SDLYENVK-DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CSTTTTCT-TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred Cchhcccc-cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 99887554 378999999987754 3467789999999999988763
No 57
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.62 E-value=1e-15 Score=116.02 Aligned_cols=121 Identities=13% Similarity=0.044 Sum_probs=88.5
Q ss_pred hhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE
Q 028002 51 APHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH 130 (215)
Q Consensus 51 ~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~ 130 (215)
...+...+++.+.. ..++.+|||+|||+|.++..++.. +. .+|+++|+|+.+++.|++++...+.. ..+++++
T Consensus 37 ~~~~~~~l~~~l~~-~~~~~~vLDlGcGtG~~~~~~~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~----~~~v~~~ 109 (201)
T 2ift_A 37 GDRVKETLFNWLMP-YIHQSECLDGFAGSGSLGFEALSR-QA-KKVTFLELDKTVANQLKKNLQTLKCS----SEQAEVI 109 (201)
T ss_dssp -CHHHHHHHHHHHH-HHTTCEEEETTCTTCHHHHHHHHT-TC-SEEEEECSCHHHHHHHHHHHHHTTCC----TTTEEEE
T ss_pred HHHHHHHHHHHHHH-hcCCCeEEEcCCccCHHHHHHHHc-cC-CEEEEEECCHHHHHHHHHHHHHhCCC----ccceEEE
Confidence 33345556666542 125789999999999999987776 33 68999999999999999998875531 1378999
Q ss_pred eCCCCCCCCC--CCC-ccEEEEccCCCC-----chHHH--HHhcCCCcEEEEEeCCCc
Q 028002 131 VGDGRKGWPE--FAP-YDAIHVGAAAPE-----IPQAL--IDQLKPGGRMVIPVGNIF 178 (215)
Q Consensus 131 ~~d~~~~~~~--~~~-~D~V~~~~~~~~-----~~~~~--~~~Lk~gG~lv~~~~~~~ 178 (215)
.+|+.+..+. .++ ||+|+++.++.. +++.+ .++|+|||.+++.++...
T Consensus 110 ~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 110 NQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CSCHHHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred ECCHHHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 9997654332 367 999999988532 33445 446999999999876543
No 58
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.62 E-value=3.5e-15 Score=111.25 Aligned_cols=118 Identities=25% Similarity=0.369 Sum_probs=94.6
Q ss_pred cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeE
Q 028002 49 ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
.+.+.+...+++.+. ..++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++...+.. .++.
T Consensus 16 ~~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~-----~~~~ 85 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLG-----DNVT 85 (192)
T ss_dssp CCCHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCC-----TTEE
T ss_pred CChHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCC-----cceE
Confidence 345555666677665 7788999999999999999999874 79999999999999999998876542 5789
Q ss_pred EEeCCCCCCCCCCCCccEEEEccCCCC---chHHHHHhcCCCcEEEEEeCC
Q 028002 129 VHVGDGRKGWPEFAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 129 ~~~~d~~~~~~~~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+..+|.....+..+.||+|++...+++ +++.+.++|+|||.+++..++
T Consensus 86 ~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 86 LMEGDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp EEESCHHHHHTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred EEecCHHHhcccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 999987663333258999999987655 446788999999999997654
No 59
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.62 E-value=2.5e-15 Score=116.48 Aligned_cols=106 Identities=25% Similarity=0.246 Sum_probs=86.9
Q ss_pred HHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC
Q 028002 59 LQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW 138 (215)
Q Consensus 59 l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 138 (215)
+..+...+.++.+|||+|||+|..+..+++. + .+++++|+++.+++.++++.. ..+++++.+|+....
T Consensus 44 ~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 44 IPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT-G--YKAVGVDISEVMIQKGKERGE---------GPDLSFIKGDLSSLP 111 (242)
T ss_dssp HHHHHHHSCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHTTTC---------BTTEEEEECBTTBCS
T ss_pred HHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc-C--CeEEEEECCHHHHHHHHhhcc---------cCCceEEEcchhcCC
Confidence 4444444678899999999999999999987 3 689999999999999987631 168999999998765
Q ss_pred CCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeCC
Q 028002 139 PEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
...++||+|++...++++ ++++.++|+|||++++...+
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 112 FENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp SCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 555899999999988754 46789999999999998743
No 60
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.62 E-value=9.6e-15 Score=112.00 Aligned_cols=112 Identities=21% Similarity=0.226 Sum_probs=89.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+.+.+...+.++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++...+ .+++++.+|+
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~ 94 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-------SNVEFIVGDA 94 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-------CCCEEEECCT
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-------CCceEEECch
Confidence 344455555456678899999999999999998874 389999999999999999887643 4789999998
Q ss_pred CCCCCCCCCccEEEEccC--CCC------chHHHHHhcCCCcEEEEEeCC
Q 028002 135 RKGWPEFAPYDAIHVGAA--APE------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~--~~~------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.......++||+|++... ..+ +++.+.++|+|||.+++..++
T Consensus 95 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 95 RKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 775444478999999987 433 346788999999999998765
No 61
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.62 E-value=2.3e-15 Score=114.89 Aligned_cols=98 Identities=19% Similarity=0.232 Sum_probs=82.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++... .+++++.+|+.+..+ .++||
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~-~~~fD 116 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRW--------SHISWAATDILQFST-AELFD 116 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTC--------SSEEEEECCTTTCCC-SCCEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccC--------CCeEEEEcchhhCCC-CCCcc
Confidence 5567899999999999999999874 69999999999999999876542 479999999987764 48999
Q ss_pred EEEEccCCCCch---------HHHHHhcCCCcEEEEEeC
Q 028002 146 AIHVGAAAPEIP---------QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 146 ~V~~~~~~~~~~---------~~~~~~Lk~gG~lv~~~~ 175 (215)
+|++...++++. +++.++|||||.+++.++
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 999998775543 467899999999999653
No 62
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.62 E-value=1.9e-15 Score=114.45 Aligned_cols=124 Identities=15% Similarity=0.203 Sum_probs=91.6
Q ss_pred cCCCccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh
Q 028002 37 VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS 116 (215)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 116 (215)
.+..++++.+.+. ....+++.+.....++.+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++...
T Consensus 33 ~~~~~~f~~~~~~----~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~ 106 (205)
T 3grz_A 33 LDPGLAFGTGNHQ----TTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALN 106 (205)
T ss_dssp ESCC-----CCHH----HHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHT
T ss_pred ecCCcccCCCCCc----cHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHc
Confidence 3444445554332 234455555544677899999999999999998875 3 369999999999999999998876
Q ss_pred cccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCCc---hHHHHHhcCCCcEEEEEe
Q 028002 117 AAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPEI---PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 117 ~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~~---~~~~~~~Lk~gG~lv~~~ 174 (215)
+. .++++..+|+..... ++||+|+++...+++ ++.+.++|+|||++++..
T Consensus 107 ~~------~~v~~~~~d~~~~~~--~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 107 GI------YDIALQKTSLLADVD--GKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp TC------CCCEEEESSTTTTCC--SCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred CC------CceEEEeccccccCC--CCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 54 359999999877542 789999998877553 456778999999999963
No 63
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=5.8e-15 Score=115.37 Aligned_cols=113 Identities=19% Similarity=0.289 Sum_probs=89.9
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...++..+. ...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.|++++...+.. ++++++.+|+
T Consensus 51 ~~~~l~~l~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~-----~~v~~~~~d~ 124 (248)
T 3tfw_A 51 QGQFLALLV-RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD-----QRVTLREGPA 124 (248)
T ss_dssp HHHHHHHHH-HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT-----TTEEEEESCH
T ss_pred HHHHHHHHH-hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEEcCH
Confidence 444555553 2456789999999999999999998754689999999999999999999887654 5899999998
Q ss_pred CCCCC---CCCCccEEEEccCCCC---chHHHHHhcCCCcEEEEE
Q 028002 135 RKGWP---EFAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 135 ~~~~~---~~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~ 173 (215)
.+..+ ..++||+|+++..... +++.+.++|||||+|++.
T Consensus 125 ~~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 125 LQSLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp HHHHHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHHHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 65322 2258999999887654 456788999999999985
No 64
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.62 E-value=2.8e-15 Score=121.12 Aligned_cols=105 Identities=17% Similarity=0.200 Sum_probs=87.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++...+. .++.++.+|+.......+.||
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------LNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------CSEEEESSCGGGGGGGCCCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CeEEEEECChhhcccccccCC
Confidence 77889999999999999999999875558999999999999999999988765 479999999876543336899
Q ss_pred EEEEccCCC----------------------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAP----------------------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~----------------------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++.++. .+++.+.++|||||+|++++++
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 999976531 3446688999999999998765
No 65
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.61 E-value=4.1e-15 Score=118.15 Aligned_cols=103 Identities=19% Similarity=0.136 Sum_probs=88.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
.+++.+|||+|||+|.++..+++.. . .+|+++|+++.+++.|++++..++.. ++++++.+|+.+... .++||
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~-~-~~V~~vD~s~~~~~~a~~n~~~n~~~-----~~v~~~~~D~~~~~~-~~~fD 194 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-K-AKVIAIEKDPYTFKFLVENIHLNKVE-----DRMSAYNMDNRDFPG-ENIAD 194 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-C-CEEEEECCCHHHHHHHHHHHHHTTCT-----TTEEEECSCTTTCCC-CSCEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEEECCHHHhcc-cCCcc
Confidence 6778999999999999999999984 4 27999999999999999999887653 469999999988766 47899
Q ss_pred EEEEccCCC--CchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAP--EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~--~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++.+.. .+++.+.++|+|||++++..+.
T Consensus 195 ~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 195 RILMGYVVRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCchhHHHHHHHHHHHCCCCeEEEEEEee
Confidence 999987754 5778899999999999996543
No 66
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.61 E-value=1.8e-15 Score=116.22 Aligned_cols=111 Identities=23% Similarity=0.330 Sum_probs=90.6
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC
Q 028002 60 QLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP 139 (215)
Q Consensus 60 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 139 (215)
+.+...++++.+|+|+|||+|.+++.+++. ++..+|+++|+++.+++.|++++..++.. +++++..+|..+...
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~-----~~I~~~~gD~l~~~~ 86 (230)
T 3lec_A 13 QKVANYVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLT-----SKIDVRLANGLSAFE 86 (230)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCT-----TTEEEEECSGGGGCC
T ss_pred HHHHHhCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEECchhhccc
Confidence 444446788899999999999999999987 56578999999999999999999988765 679999999988766
Q ss_pred CCCCccEEEEccCC----CCchHHHHHhcCCCcEEEEEeCC
Q 028002 140 EFAPYDAIHVGAAA----PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 140 ~~~~~D~V~~~~~~----~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+.++||+|+..+.. ..+++.....|+++|+|+++-..
T Consensus 87 ~~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 87 EADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp GGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred cccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECCC
Confidence 53479998766543 34456667789999999997543
No 67
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.61 E-value=3.6e-15 Score=118.60 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=85.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC-CCCCCc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW-PEFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~ 144 (215)
..++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++...+.. .+++++.+|+.... ...++|
T Consensus 66 ~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~f 137 (285)
T 4htf_A 66 GPQKLRVLDAGGGEGQTAIKMAER-G--HQVILCDLSAQMIDRAKQAAEAKGVS-----DNMQFIHCAAQDVASHLETPV 137 (285)
T ss_dssp CSSCCEEEEETCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHC-CCG-----GGEEEEESCGGGTGGGCSSCE
T ss_pred CCCCCEEEEeCCcchHHHHHHHHC-C--CEEEEEECCHHHHHHHHHHHHhcCCC-----cceEEEEcCHHHhhhhcCCCc
Confidence 344679999999999999999987 3 69999999999999999998876543 58999999988765 234799
Q ss_pred cEEEEccCCCCc------hHHHHHhcCCCcEEEEEeCC
Q 028002 145 DAIHVGAAAPEI------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 145 D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+|++...++++ ++++.++|||||++++..++
T Consensus 138 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 138 DLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred eEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 999999887654 46789999999999997754
No 68
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.61 E-value=4.6e-15 Score=117.64 Aligned_cols=102 Identities=20% Similarity=0.289 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.+++++...+. .++.++.+|+....+. ++||+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~------~~v~~~~~d~~~~~~~-~~fD~ 179 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAI------KNIHILQSDWFSALAG-QQFAM 179 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCSTTGGGTT-CCEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEcchhhhccc-CCccE
Confidence 567899999999999999999875 557999999999999999999887654 4799999998775433 68999
Q ss_pred EEEccCCC-------------------------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 147 IHVGAAAP-------------------------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 147 V~~~~~~~-------------------------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|++++++. .+++.+.++|+|||++++..+.
T Consensus 180 Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 180 IVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp EEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred EEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 99986542 1235677899999999998654
No 69
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.61 E-value=3.6e-15 Score=117.97 Aligned_cols=104 Identities=24% Similarity=0.326 Sum_probs=88.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++. .+..+++++|+++.+++.+++++...+. .++.+..+|+.......++||
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD 107 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKN-NPDAEITSIDISPESLEKARENTEKNGI------KNVKFLQANIFSLPFEDSSFD 107 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGGCCSCTTCEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEEcccccCCCCCCCee
Confidence 477899999999999999999998 4558999999999999999999887654 579999999987655558999
Q ss_pred EEEEccCCCCc------hHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAPEI------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++...++++ ++.+.++|||||++++..++
T Consensus 108 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 108 HIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 99999877553 46789999999999997654
No 70
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.61 E-value=8.9e-15 Score=120.97 Aligned_cols=101 Identities=28% Similarity=0.343 Sum_probs=86.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.++.+|||+|||+|.++..+++. + .+|+++|+|+.+++.+++++..++. +++++.+|+.+.....++||+
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~-g--~~V~gvDis~~al~~A~~n~~~~~~-------~v~~~~~D~~~~~~~~~~fD~ 301 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM-G--AEVVGVEDDLASVLSLQKGLEANAL-------KAQALHSDVDEALTEEARFDI 301 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT-T--CEEEEEESBHHHHHHHHHHHHHTTC-------CCEEEECSTTTTSCTTCCEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHHcCC-------CeEEEEcchhhccccCCCeEE
Confidence 36789999999999999999987 3 6999999999999999999987653 488999999887655579999
Q ss_pred EEEccCCCC-----------chHHHHHhcCCCcEEEEEeCCC
Q 028002 147 IHVGAAAPE-----------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 147 V~~~~~~~~-----------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|+++.++++ +++.+.++|+|||.+++.++..
T Consensus 302 Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 302 IVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp EEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred EEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 999988765 4467889999999999987654
No 71
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.61 E-value=4.1e-15 Score=116.18 Aligned_cols=113 Identities=24% Similarity=0.303 Sum_probs=89.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.|++++...+.. ++++++.+|+
T Consensus 67 ~~~ll~~l~~-~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-----~~i~~~~gda 140 (247)
T 1sui_A 67 EGQFLSMLLK-LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD-----HKIDFREGPA 140 (247)
T ss_dssp HHHHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG-----GGEEEEESCH
T ss_pred HHHHHHHHHH-hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CCeEEEECCH
Confidence 3444554432 445689999999999999999998754689999999999999999999876653 5799999998
Q ss_pred CCCCCC-------CCCccEEEEccCCCC---chHHHHHhcCCCcEEEEE
Q 028002 135 RKGWPE-------FAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 135 ~~~~~~-------~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~ 173 (215)
.+..+. .++||+|+++..... +++.+.++|+|||+|++.
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence 653221 378999999876544 446788999999999984
No 72
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.61 E-value=3.4e-15 Score=114.61 Aligned_cols=112 Identities=14% Similarity=0.200 Sum_probs=86.0
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..++..+. ...++.+|||+|||+|..+..+++.+++..+|+++|+++.+++.|++++...+.. ++++++.+|+.
T Consensus 47 ~~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~ 120 (221)
T 3u81_A 47 GQIMDAVI-REYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ-----DKVTILNGASQ 120 (221)
T ss_dssp HHHHHHHH-HHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-----GGEEEEESCHH
T ss_pred HHHHHHHH-HhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC-----CceEEEECCHH
Confidence 33444433 1445789999999999999999987655689999999999999999999887654 57999999975
Q ss_pred CCCCC------CCCccEEEEccCCCCchH---HHH--HhcCCCcEEEEE
Q 028002 136 KGWPE------FAPYDAIHVGAAAPEIPQ---ALI--DQLKPGGRMVIP 173 (215)
Q Consensus 136 ~~~~~------~~~~D~V~~~~~~~~~~~---~~~--~~Lk~gG~lv~~ 173 (215)
+..+. .++||+|+++...++... .+. ++|||||+|++.
T Consensus 121 ~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~ 169 (221)
T 3u81_A 121 DLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLAD 169 (221)
T ss_dssp HHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEES
T ss_pred HHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEe
Confidence 42211 158999999987765543 111 799999999985
No 73
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.60 E-value=5.6e-15 Score=118.35 Aligned_cols=102 Identities=17% Similarity=0.128 Sum_probs=84.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh-cccCcccCCCeEEEeCCCCCCCCCC---
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS-AAAPLLKEGSLSVHVGDGRKGWPEF--- 141 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~--- 141 (215)
..++.+|||+|||+|..+..+++.+.+..+|+|+|+|+.+++.+++++... +. ..+++++++|+.+.....
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~ 108 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-----YKNVSFKISSSDDFKFLGADS 108 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-----CTTEEEEECCTTCCGGGCTTT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-----CCceEEEEcCHHhCCcccccc
Confidence 457899999999999999999987534589999999999999999988764 21 268999999998754443
Q ss_pred ---CCccEEEEccCCCC-----chHHHHHhcCCCcEEEE
Q 028002 142 ---APYDAIHVGAAAPE-----IPQALIDQLKPGGRMVI 172 (215)
Q Consensus 142 ---~~~D~V~~~~~~~~-----~~~~~~~~Lk~gG~lv~ 172 (215)
++||+|++...+++ +++++.++|+|||.|++
T Consensus 109 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 109 VDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 68999999988755 44678999999999988
No 74
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.60 E-value=2.8e-15 Score=113.63 Aligned_cols=119 Identities=17% Similarity=0.077 Sum_probs=88.3
Q ss_pred chhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEE
Q 028002 50 SAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSV 129 (215)
Q Consensus 50 ~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~ 129 (215)
+...+...+++.+... .++.+|||+|||+|.++..+++. +. .+|+++|+|+.+++.|++++...+. .++++
T Consensus 37 ~~~~~~~~l~~~l~~~-~~~~~vLDlgcG~G~~~~~l~~~-~~-~~V~~vD~s~~~l~~a~~~~~~~~~------~~v~~ 107 (202)
T 2fpo_A 37 TTDRVRETLFNWLAPV-IVDAQCLDCFAGSGALGLEALSR-YA-AGATLIEMDRAVSQQLIKNLATLKA------GNARV 107 (202)
T ss_dssp -CHHHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHT-TC-SEEEEECSCHHHHHHHHHHHHHTTC------CSEEE
T ss_pred CHHHHHHHHHHHHHhh-cCCCeEEEeCCCcCHHHHHHHhc-CC-CEEEEEECCHHHHHHHHHHHHHcCC------CcEEE
Confidence 3334455666666421 25789999999999999988776 33 5899999999999999999987653 58999
Q ss_pred EeCCCCCCCC-CCCCccEEEEccCCC-----CchHHHHH--hcCCCcEEEEEeCCC
Q 028002 130 HVGDGRKGWP-EFAPYDAIHVGAAAP-----EIPQALID--QLKPGGRMVIPVGNI 177 (215)
Q Consensus 130 ~~~d~~~~~~-~~~~~D~V~~~~~~~-----~~~~~~~~--~Lk~gG~lv~~~~~~ 177 (215)
+++|+.+..+ ..++||+|+++.+++ .+++.+.+ +|+|||++++.+...
T Consensus 108 ~~~D~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 108 VNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp ECSCHHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred EECCHHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 9999765322 336899999998844 23344544 499999999987653
No 75
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.60 E-value=1e-14 Score=112.54 Aligned_cols=113 Identities=20% Similarity=0.274 Sum_probs=84.8
Q ss_pred HHHHHHHHH-hcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 55 HATCLQLLE-ENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 55 ~~~~l~~l~-~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
...++..+. ..++++.+|||+|||+|..+..+++.+++.++|+++|+++.+++...+..... .++.++.+|
T Consensus 62 a~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--------~nv~~i~~D 133 (232)
T 3id6_C 62 AGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--------PNIFPLLAD 133 (232)
T ss_dssp HHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--------TTEEEEECC
T ss_pred HHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--------CCeEEEEcc
Confidence 444545442 23678999999999999999999999887899999999999876554443321 589999999
Q ss_pred CCCCC---CCCCCccEEEEccCCCCch----HHHHHhcCCCcEEEEEeC
Q 028002 134 GRKGW---PEFAPYDAIHVGAAAPEIP----QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 134 ~~~~~---~~~~~~D~V~~~~~~~~~~----~~~~~~Lk~gG~lv~~~~ 175 (215)
+.... ...++||+|+++.+.+... ..+.+.|||||+|++++.
T Consensus 134 a~~~~~~~~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 134 ARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp TTCGGGTTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccchhhhccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 87532 1136899999998775433 344559999999999863
No 76
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.60 E-value=6e-15 Score=113.89 Aligned_cols=100 Identities=18% Similarity=0.135 Sum_probs=84.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.+++++... .++.++.+|+...... ++||
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~~-~~fD 111 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGN--------LKVKYIEADYSKYDFE-EKYD 111 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSC--------TTEEEEESCTTTCCCC-SCEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccC--------CCEEEEeCchhccCCC-CCce
Confidence 4567899999999999999999985 5589999999999999999876432 3799999999886665 8999
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEEeC
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+|++...++++ ++++.++|||||++++...
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99999887654 4567899999999999763
No 77
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.60 E-value=2.9e-15 Score=116.01 Aligned_cols=111 Identities=15% Similarity=0.163 Sum_probs=90.3
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC
Q 028002 60 QLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP 139 (215)
Q Consensus 60 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 139 (215)
+.+...++++.+|||+|||+|.+++.+++. ++..+|+++|+++.+++.|++++..+++. +++++..+|..+...
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~-----~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 13 EKVASYITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLT-----EQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHTTCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT-----TTEEEEECSGGGGCC
T ss_pred HHHHHhCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEEecchhhccC
Confidence 444445788899999999999999999987 56578999999999999999999988764 579999999988766
Q ss_pred CCCCccEEEEccCC----CCchHHHHHhcCCCcEEEEEeCC
Q 028002 140 EFAPYDAIHVGAAA----PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 140 ~~~~~D~V~~~~~~----~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+.++||+|+..+.. ..+++.....|+++|+|+++-..
T Consensus 87 ~~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 87 KKDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp GGGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred ccccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 53469998765543 34556677889999999997543
No 78
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.60 E-value=4.8e-15 Score=114.96 Aligned_cols=110 Identities=16% Similarity=0.114 Sum_probs=84.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC---CCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW---PEFA 142 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~ 142 (215)
..++.+|||||||+|.++..+++.. +...++|+|+++.+++.|++++............++.++.+|+...+ ...+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 4556799999999999999999884 56799999999999999998876432111112368999999987632 2347
Q ss_pred CccEEEEccCCC--------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 143 PYDAIHVGAAAP--------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 143 ~~D~V~~~~~~~--------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+||.|++..+.+ .+++.+.++|||||.|++.+..
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 899998876543 3667889999999999998775
No 79
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.60 E-value=1.8e-15 Score=112.71 Aligned_cols=122 Identities=15% Similarity=0.160 Sum_probs=91.8
Q ss_pred cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeE
Q 028002 49 ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
.+...+...+++.+. ...++.+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++...+.. .+++
T Consensus 26 p~~~~~~~~~~~~l~-~~~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~~ 97 (187)
T 2fhp_A 26 PTTDKVKESIFNMIG-PYFDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEP-----EKFE 97 (187)
T ss_dssp CCCHHHHHHHHHHHC-SCCSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCG-----GGEE
T ss_pred cCHHHHHHHHHHHHH-hhcCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCC-----cceE
Confidence 344445666666664 2356789999999999999988875 3 368999999999999999999876543 4799
Q ss_pred EEeCCCCCCCC----CCCCccEEEEccCCC-----CchHHH--HHhcCCCcEEEEEeCCCc
Q 028002 129 VHVGDGRKGWP----EFAPYDAIHVGAAAP-----EIPQAL--IDQLKPGGRMVIPVGNIF 178 (215)
Q Consensus 129 ~~~~d~~~~~~----~~~~~D~V~~~~~~~-----~~~~~~--~~~Lk~gG~lv~~~~~~~ 178 (215)
++.+|+.+... ..++||+|+++.++. .....+ .++|+|||.+++.++...
T Consensus 98 ~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 98 VRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp EEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 99999876332 137899999998743 122344 667999999999887653
No 80
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.60 E-value=9.9e-15 Score=117.87 Aligned_cols=101 Identities=22% Similarity=0.179 Sum_probs=84.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
+.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.+++++...+.. .++++..+|+.+.. ++||
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~---~~fD 157 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTN-----RSRQVLLQGWEDFA---EPVD 157 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCS-----SCEEEEESCGGGCC---CCCS
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCC-----CceEEEECChHHCC---CCcC
Confidence 56788999999999999999998863 69999999999999999998776543 46899999986642 7899
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++...++++ ++++.++|||||.+++..+.
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 99999877654 35788999999999997654
No 81
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.60 E-value=4.6e-15 Score=112.71 Aligned_cols=111 Identities=22% Similarity=0.202 Sum_probs=88.1
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC
Q 028002 57 TCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK 136 (215)
Q Consensus 57 ~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~ 136 (215)
.+...+...+.++.+|||+|||+|.++..+++. ++ .+++++|+++.+++.+++++.. ..++.+..+|+..
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~~D~s~~~~~~a~~~~~~--------~~~i~~~~~d~~~ 100 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLG-GF-PNVTSVDYSSVVVAAMQACYAH--------VPQLRWETMDVRK 100 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHT-TC-CCEEEEESCHHHHHHHHHHTTT--------CTTCEEEECCTTS
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHc-CC-CcEEEEeCCHHHHHHHHHhccc--------CCCcEEEEcchhc
Confidence 345555545678899999999999999999987 44 3899999999999999987643 1578999999877
Q ss_pred CCCCCCCccEEEEccCCC---------------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 137 GWPEFAPYDAIHVGAAAP---------------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~---------------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
.....++||+|++..+++ .+++++.++|+|||.+++..++.
T Consensus 101 ~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 101 LDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 544447899999876542 34467889999999999988764
No 82
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.60 E-value=2.6e-15 Score=115.21 Aligned_cols=113 Identities=23% Similarity=0.327 Sum_probs=89.2
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...++..+. ...++.+|||+|||+|..+..+++.+++.++++++|+++.+++.+++++...+.. ++++++.+|+
T Consensus 46 ~~~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~v~~~~~d~ 119 (223)
T 3duw_A 46 QGKFLQLLV-QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN-----DRVEVRTGLA 119 (223)
T ss_dssp HHHHHHHHH-HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEESCH
T ss_pred HHHHHHHHH-HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEEcCH
Confidence 445555543 2456789999999999999999998644589999999999999999999877654 5699999998
Q ss_pred CCCCCC-----CCCccEEEEccCCCC---chHHHHHhcCCCcEEEEE
Q 028002 135 RKGWPE-----FAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 135 ~~~~~~-----~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~ 173 (215)
.+..+. .++||+|+++..... +++.+.++|+|||++++.
T Consensus 120 ~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 120 LDSLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HHHHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence 653221 157999999887554 456788999999998885
No 83
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.60 E-value=1.4e-14 Score=114.46 Aligned_cols=114 Identities=17% Similarity=0.206 Sum_probs=88.2
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChH------HHHHHHHHHHhhcccCcccCCCeE
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPE------LVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~------~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
...+++.+. +.++.+|||+|||+|..+..+++..++..+++++|+|+. +++.+++++...+.. .+++
T Consensus 32 ~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~-----~~v~ 104 (275)
T 3bkx_A 32 RLAIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG-----DRLT 104 (275)
T ss_dssp HHHHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG-----GGEE
T ss_pred HHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC-----CceE
Confidence 445556554 778899999999999999999998766679999999997 999999998765543 4789
Q ss_pred EEeCC-CCCC--CCCCCCccEEEEccCCCCch------HHHHHhcCCCcEEEEEeC
Q 028002 129 VHVGD-GRKG--WPEFAPYDAIHVGAAAPEIP------QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 129 ~~~~d-~~~~--~~~~~~~D~V~~~~~~~~~~------~~~~~~Lk~gG~lv~~~~ 175 (215)
+..+| .... ....++||+|++...++++. +.+..+++|||++++...
T Consensus 105 ~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 105 VHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp EECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 99998 3221 12337899999998876543 455667777999999653
No 84
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.60 E-value=9.1e-16 Score=113.59 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=88.7
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
+...+++.+. ...++.+|||+|||+|..+..+++. +. .+++++|+++.+++.+++++...+.. .++.++.+|
T Consensus 18 ~~~~~~~~l~-~~~~~~~vLDlGcG~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~~~~~~d 89 (177)
T 2esr_A 18 VRGAIFNMIG-PYFNGGRVLDLFAGSGGLAIEAVSR-GM-SAAVLVEKNRKAQAIIQDNIIMTKAE-----NRFTLLKME 89 (177)
T ss_dssp CHHHHHHHHC-SCCCSCEEEEETCTTCHHHHHHHHT-TC-CEEEEECCCHHHHHHHHHHHHTTTCG-----GGEEEECSC
T ss_pred HHHHHHHHHH-hhcCCCeEEEeCCCCCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHHHHHcCCC-----CceEEEECc
Confidence 3455556553 2456789999999999999999887 32 69999999999999999999876543 478999999
Q ss_pred CCCCCC-CCCCccEEEEccCCC-----CchHHHH--HhcCCCcEEEEEeCCC
Q 028002 134 GRKGWP-EFAPYDAIHVGAAAP-----EIPQALI--DQLKPGGRMVIPVGNI 177 (215)
Q Consensus 134 ~~~~~~-~~~~~D~V~~~~~~~-----~~~~~~~--~~Lk~gG~lv~~~~~~ 177 (215)
+.+..+ ..+.||+|+++.++. ...+.+. ++|+|||++++.++..
T Consensus 90 ~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 90 AERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHHHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 866322 225799999997752 2334555 8899999999988664
No 85
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.60 E-value=2.3e-15 Score=116.34 Aligned_cols=117 Identities=18% Similarity=0.294 Sum_probs=93.3
Q ss_pred cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeE
Q 028002 49 ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
+.++.....+...+. ..++.+|||+|||+|..+..+++.+ +..+++++|+++.+++.|++++...+.. .++.
T Consensus 37 ~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~v~ 108 (233)
T 2gpy_A 37 IMDLLGMESLLHLLK--MAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLE-----SRIE 108 (233)
T ss_dssp CCCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCT-----TTEE
T ss_pred CcCHHHHHHHHHHHh--ccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEE
Confidence 345555555555554 5567899999999999999999985 4589999999999999999999876653 4799
Q ss_pred EEeCCCCCCCCC---CCCccEEEEccCCCC---chHHHHHhcCCCcEEEEE
Q 028002 129 VHVGDGRKGWPE---FAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 129 ~~~~d~~~~~~~---~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~ 173 (215)
++.+|+....+. .++||+|+++.+.+. +++.+.++|+|||++++.
T Consensus 109 ~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 109 LLFGDALQLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EECSCGGGSHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEECCHHHHHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 999998764321 368999999988753 447788999999999996
No 86
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.60 E-value=1.7e-15 Score=117.63 Aligned_cols=119 Identities=17% Similarity=0.254 Sum_probs=92.0
Q ss_pred cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeE
Q 028002 49 ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
...|.....+...+. ..++.+|||+|||+|..+..+++.+++..+++++|+++.+++.|++++...+.. .++.
T Consensus 43 ~~~~~~~~~l~~l~~--~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-----~~v~ 115 (239)
T 2hnk_A 43 QISPEEGQFLNILTK--ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE-----NKIF 115 (239)
T ss_dssp SCCHHHHHHHHHHHH--HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-----GGEE
T ss_pred ccCHHHHHHHHHHHH--hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CCEE
Confidence 345554444444443 556789999999999999999998654589999999999999999999876643 4589
Q ss_pred EEeCCCCCCCC---------------C-C-CCccEEEEccCCCC---chHHHHHhcCCCcEEEEEe
Q 028002 129 VHVGDGRKGWP---------------E-F-APYDAIHVGAAAPE---IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 129 ~~~~d~~~~~~---------------~-~-~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~~ 174 (215)
+..+|..+..+ . . ++||+|+++..... +++.+.++|+|||++++..
T Consensus 116 ~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 116 LKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp EEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 99998754221 1 2 67999999977664 4478899999999999964
No 87
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.60 E-value=4.4e-15 Score=114.33 Aligned_cols=93 Identities=23% Similarity=0.288 Sum_probs=80.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-C-CCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-E-FAP 143 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~-~~~ 143 (215)
..++.+|||+|||+|..+..+++. + .+|+++|+++.+++.++++. .+++++++|+....+ . .++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~~ 111 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-A--ARWAAYDFSPELLKLARANA-----------PHADVYEWNGKGELPAGLGAP 111 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-S--SEEEEEESCHHHHHHHHHHC-----------TTSEEEECCSCSSCCTTCCCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHhC-----------CCceEEEcchhhccCCcCCCC
Confidence 567899999999999999999987 3 79999999999999998761 578999999954333 3 478
Q ss_pred ccEEEEccCCCCchHHHHHhcCCCcEEEE
Q 028002 144 YDAIHVGAAAPEIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 144 ~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~ 172 (215)
||+|++......+++++.++|||||.++.
T Consensus 112 fD~v~~~~~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 112 FGLIVSRRGPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEEEEESCCSGGGGGHHHHEEEEEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHcCCCcEEEE
Confidence 99999998888899999999999999994
No 88
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.60 E-value=1.2e-14 Score=109.16 Aligned_cols=106 Identities=18% Similarity=0.104 Sum_probs=86.0
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC
Q 028002 57 TCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK 136 (215)
Q Consensus 57 ~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~ 136 (215)
.+++.+. ..++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++...+. .++.+..+|+..
T Consensus 23 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~ 91 (199)
T 2xvm_A 23 EVLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN-G--YDVDAWDKNAMSIANVERIKSIENL------DNLHTRVVDLNN 91 (199)
T ss_dssp HHHHHTT--TSCSCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECCGGG
T ss_pred HHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC-C--CeEEEEECCHHHHHHHHHHHHhCCC------CCcEEEEcchhh
Confidence 4455554 456789999999999999999987 3 6999999999999999998877553 479999999877
Q ss_pred CCCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 137 GWPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
... .++||+|++...++++ ++.+.++|+|||.+++..
T Consensus 92 ~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 92 LTF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CCC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 554 4789999999876543 357889999999987743
No 89
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=5.6e-15 Score=114.23 Aligned_cols=99 Identities=21% Similarity=0.161 Sum_probs=81.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++...+.. .++.++.+|+....+. ++||+|
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~-~~fD~v 136 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKA-----EYFSFVKEDVFTWRPT-ELFDLI 136 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGG-----GGEEEECCCTTTCCCS-SCEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCC-----cceEEEECchhcCCCC-CCeeEE
Confidence 34599999999999999887642 78999999999999999988654322 5799999999886544 699999
Q ss_pred EEccCCCCch--------HHHHHhcCCCcEEEEEeC
Q 028002 148 HVGAAAPEIP--------QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 148 ~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~ 175 (215)
++...++++. +++.++|+|||.+++...
T Consensus 137 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 137 FDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp EEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 9998876543 678899999999998654
No 90
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.59 E-value=2.8e-15 Score=120.50 Aligned_cols=107 Identities=21% Similarity=0.253 Sum_probs=88.3
Q ss_pred HhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCC
Q 028002 63 EENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFA 142 (215)
Q Consensus 63 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 142 (215)
...+.++.+|||+|||+|..+..++....+..+++++|+++.+++.+++++...+.. .+++++.+|+.+.... +
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~-~ 186 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA-----GQITLHRQDAWKLDTR-E 186 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG-----GGEEEEECCGGGCCCC-S
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC-----CceEEEECchhcCCcc-C
Confidence 334788899999999999999988633345589999999999999999998776543 4699999999886555 8
Q ss_pred CccEEEEccCCCCc---------hHHHHHhcCCCcEEEEEeC
Q 028002 143 PYDAIHVGAAAPEI---------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 143 ~~D~V~~~~~~~~~---------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+||+|++...++++ ++++.++|||||++++...
T Consensus 187 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 187 GYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp CEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999998877553 4678899999999999763
No 91
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.59 E-value=6.9e-15 Score=115.60 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=85.7
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+.+.+.....++.+|||+|||+|.++..+++.. .+++++|+|+.+++.+++++ .++.++.+|+
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~ 102 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRN-----------PDAVLHHGDM 102 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHC-----------TTSEEEECCT
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhC-----------CCCEEEECCh
Confidence 445555555456677899999999999999998873 68999999999999998763 3788999999
Q ss_pred CCCCCCCCCccEEEEcc-CCCCc---------hHHHHHhcCCCcEEEEEe
Q 028002 135 RKGWPEFAPYDAIHVGA-AAPEI---------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~-~~~~~---------~~~~~~~Lk~gG~lv~~~ 174 (215)
..... .++||+|++.. .++++ ++++.++|||||++++..
T Consensus 103 ~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 103 RDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp TTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 87655 48999999997 66655 356889999999999963
No 92
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.59 E-value=1.6e-14 Score=109.04 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=80.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
+.++ +|||+|||+|..+..+++. + .+++++|+++.+++.+++++...+ .++.+..+|+.......++||
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~~~~fD 96 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL-G--YEVTAVDQSSVGLAKAKQLAQEKG-------VKITTVQSNLADFDIVADAWE 96 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT-T--CEEEEECSSHHHHHHHHHHHHHHT-------CCEEEECCBTTTBSCCTTTCS
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC-C--CeEEEEECCHHHHHHHHHHHHhcC-------CceEEEEcChhhcCCCcCCcc
Confidence 5566 9999999999999999876 3 699999999999999999887653 378899999877654447899
Q ss_pred EEEEccCCC------CchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAP------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++..... .+++.+.++|+|||.+++...+
T Consensus 97 ~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 97 GIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp EEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred EEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 999864322 2346788999999999998754
No 93
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.59 E-value=8.2e-15 Score=111.06 Aligned_cols=112 Identities=17% Similarity=0.088 Sum_probs=86.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
..++++.+. +..++.+|||+|||+|..+..++...+ .+++++|+|+.+++.+++++...+ .++.+..+|+
T Consensus 11 ~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~ 80 (209)
T 2p8j_A 11 LYRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSRENN-------FKLNISKGDI 80 (209)
T ss_dssp HHHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHHT-------CCCCEEECCT
T ss_pred HHHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC-------CceEEEECch
Confidence 455555554 466789999999999987554444323 699999999999999999887643 4688899998
Q ss_pred CCCCCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEeCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.......++||+|++...++++ ++++.++|+|||++++...+
T Consensus 81 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 81 RKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp TSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 8755444789999998877665 25678999999999997643
No 94
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.59 E-value=4.3e-15 Score=115.25 Aligned_cols=108 Identities=18% Similarity=0.170 Sum_probs=87.2
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+.. ..++.+|||+|||+|..+..+++.. .+++++|+|+.+++.+++++. .++.++.+|+
T Consensus 30 ~~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~----------~~v~~~~~d~ 95 (250)
T 2p7i_A 30 HPFMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLK----------DGITYIHSRF 95 (250)
T ss_dssp HHHHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSC----------SCEEEEESCG
T ss_pred HHHHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhh----------CCeEEEEccH
Confidence 4556666652 3467899999999999999998874 489999999999999987642 1789999998
Q ss_pred CCCCCCCCCccEEEEccCCCCc------hHHHH-HhcCCCcEEEEEeCCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEI------PQALI-DQLKPGGRMVIPVGNI 177 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~------~~~~~-~~Lk~gG~lv~~~~~~ 177 (215)
.+.. ..++||+|++...++++ ++++. ++|||||++++.+++.
T Consensus 96 ~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 96 EDAQ-LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp GGCC-CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred HHcC-cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 7764 34789999999887664 36788 9999999999988664
No 95
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.59 E-value=1.1e-15 Score=117.35 Aligned_cols=113 Identities=20% Similarity=0.305 Sum_probs=88.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...++..+. ...++.+|||+|||+|..+..+++.+++..+|+++|+++.+++.+++++...+.. ++++++.+|+
T Consensus 52 ~~~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~v~~~~~d~ 125 (225)
T 3tr6_A 52 QAQLLALLV-KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS-----DKIGLRLSPA 125 (225)
T ss_dssp HHHHHHHHH-HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEESCH
T ss_pred HHHHHHHHH-HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC-----CceEEEeCCH
Confidence 344444443 2446789999999999999999988654689999999999999999999887654 5699999998
Q ss_pred CCCCCC------CCCccEEEEccCCCC---chHHHHHhcCCCcEEEEE
Q 028002 135 RKGWPE------FAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 135 ~~~~~~------~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~ 173 (215)
.+..+. .++||+|+++..... +++.+.++|+|||+|++.
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 653221 168999998876543 457788999999999984
No 96
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.59 E-value=6.6e-15 Score=107.98 Aligned_cols=118 Identities=18% Similarity=0.121 Sum_probs=89.9
Q ss_pred hhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE
Q 028002 51 APHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH 130 (215)
Q Consensus 51 ~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~ 130 (215)
...+...++..+.....++.+|||+|||+|..+..+++. ++ +++++|+++.+++.+++++...+. ++++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~--~v~~vD~~~~~~~~a~~~~~~~~~-------~~~~~ 93 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASE-GW--EAVLVEKDPEAVRLLKENVRRTGL-------GARVV 93 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHT-TC--EEEEECCCHHHHHHHHHHHHHHTC-------CCEEE
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHC-CC--eEEEEeCCHHHHHHHHHHHHHcCC-------ceEEE
Confidence 344555666666533436789999999999999999987 43 499999999999999999877541 78899
Q ss_pred eCCCCCCCC----CCCCccEEEEccCC----CCchHHHH--HhcCCCcEEEEEeCCCc
Q 028002 131 VGDGRKGWP----EFAPYDAIHVGAAA----PEIPQALI--DQLKPGGRMVIPVGNIF 178 (215)
Q Consensus 131 ~~d~~~~~~----~~~~~D~V~~~~~~----~~~~~~~~--~~Lk~gG~lv~~~~~~~ 178 (215)
.+|+.+..+ ..++||+|+++.++ ....+.+. ++|+|||.+++.++...
T Consensus 94 ~~d~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 94 ALPVEVFLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred eccHHHHHHhhhccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 998765322 12479999999765 33445666 88999999999887653
No 97
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.59 E-value=3.7e-15 Score=116.46 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.++.+|||+|||+|..+..+++. ++ .+++++|+++.+++.+++++. ..++.++.+|+.......++||+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEH-GA-KKVLGIDLSERMLTEAKRKTT---------SPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHCC---------CTTEEEEECCGGGCCCCTTCEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHhhc---------cCCeEEEEcchhhCCCCCCCeEE
Confidence 36789999999999999999987 43 489999999999999988754 16899999998776554589999
Q ss_pred EEEccCCCCc------hHHHHHhcCCCcEEEEEeCC
Q 028002 147 IHVGAAAPEI------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 147 V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|++...++++ ++++.++|||||.+++.+++
T Consensus 112 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 112 VLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9999877654 36789999999999998654
No 98
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.59 E-value=6.7e-15 Score=115.66 Aligned_cols=112 Identities=16% Similarity=0.129 Sum_probs=89.1
Q ss_pred HHHHHHHhcCC-CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 57 TCLQLLEENLK-PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 57 ~~l~~l~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
.++..+. ... ++.+|||+|||+|..+..+++.. + .+++++|+++.+++.|++++..++.. +++.++.+|+.
T Consensus 38 ~ll~~~~-~~~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~~~-----~~v~~~~~D~~ 109 (259)
T 3lpm_A 38 VLLAKFS-YLPIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQLE-----DQIEIIEYDLK 109 (259)
T ss_dssp HHHHHHC-CCCSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTTCT-----TTEEEECSCGG
T ss_pred HHHHHHh-cCCCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCCCc-----ccEEEEECcHH
Confidence 3344443 356 78999999999999999999873 4 49999999999999999999887654 57999999987
Q ss_pred CCCC--CCCCccEEEEccCCC--------------------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 136 KGWP--EFAPYDAIHVGAAAP--------------------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 136 ~~~~--~~~~~D~V~~~~~~~--------------------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+... ..++||+|++++++. .+++.+.++|+|||++++..+.
T Consensus 110 ~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 110 KITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp GGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred HhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 6542 247899999987652 2446788999999999997754
No 99
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.59 E-value=4.5e-16 Score=121.31 Aligned_cols=113 Identities=16% Similarity=0.258 Sum_probs=90.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...++..+.. ..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.|++++...+.. ++++++.+|+
T Consensus 48 ~~~~l~~l~~-~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-----~~i~~~~gda 121 (242)
T 3r3h_A 48 QAQFMQMLIR-LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE-----HKIKLRLGPA 121 (242)
T ss_dssp HHHHHHHHHH-HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT-----TTEEEEESCH
T ss_pred HHHHHHHHHh-hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEEcCH
Confidence 3444444431 445689999999999999999998755689999999999999999999887654 5899999998
Q ss_pred CCCCCC------CCCccEEEEccCCCC---chHHHHHhcCCCcEEEEE
Q 028002 135 RKGWPE------FAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 135 ~~~~~~------~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~ 173 (215)
.+..+. .++||+|+++..... +++.+.++|+|||+|++.
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence 654332 378999999887544 346788999999999983
No 100
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=5.9e-15 Score=115.46 Aligned_cols=107 Identities=16% Similarity=0.194 Sum_probs=87.2
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+. ..++.+|||+|||+|..+..+++.+ +..+++++|+++.+++.++++. .++.+..+|+
T Consensus 22 ~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~ 87 (259)
T 2p35_A 22 ARDLLAQVP--LERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL-----------PNTNFGKADL 87 (259)
T ss_dssp HHHHHTTCC--CSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS-----------TTSEEEECCT
T ss_pred HHHHHHhcC--CCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC-----------CCcEEEECCh
Confidence 344455443 5677899999999999999999986 4479999999999999998761 5789999998
Q ss_pred CCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.... ..++||+|++...++++ ++++.++|+|||++++.+++
T Consensus 88 ~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 88 ATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp TTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 8765 44789999999887664 35678999999999998764
No 101
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.58 E-value=1.4e-14 Score=110.28 Aligned_cols=108 Identities=17% Similarity=0.222 Sum_probs=87.4
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+. ...++.+|||+|||+|.++..+++. + .+++++|+++.+++.+++ .+. .++.++.+|+
T Consensus 34 ~~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~~D~s~~~~~~a~~----~~~------~~~~~~~~d~ 99 (218)
T 3ou2_A 34 APAALERLR-AGNIRGDVLELASGTGYWTRHLSGL-A--DRVTALDGSAEMIAEAGR----HGL------DNVEFRQQDL 99 (218)
T ss_dssp HHHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHH-S--SEEEEEESCHHHHHHHGG----GCC------TTEEEEECCT
T ss_pred HHHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHh----cCC------CCeEEEeccc
Confidence 345556654 3667789999999999999999988 3 699999999999999986 221 5899999999
Q ss_pred CCCCCCCCCccEEEEccCCCCch--------HHHHHhcCCCcEEEEEeCCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEIP--------QALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~~~ 177 (215)
... ...++||+|++...++++. +++.++|+|||.+++...+.
T Consensus 100 ~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 100 FDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp TSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 877 4448999999998876543 56789999999999987654
No 102
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.58 E-value=2.7e-15 Score=119.64 Aligned_cols=116 Identities=17% Similarity=0.151 Sum_probs=87.6
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
....+...+. ..++.+|||+|||+|..+..+++. + .+|+|+|+|+.+++.++++....... ....++.+..+|
T Consensus 45 ~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~~~~d 117 (293)
T 3thr_A 45 YKAWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEE-G--FSVTSVDASDKMLKYALKERWNRRKE--PAFDKWVIEEAN 117 (293)
T ss_dssp HHHHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTTTS--HHHHTCEEEECC
T ss_pred HHHHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHC-C--CeEEEEECCHHHHHHHHHhhhhcccc--cccceeeEeecC
Confidence 3455555554 456789999999999999999987 3 59999999999999999887443221 111477888888
Q ss_pred CCCCC---CCCCCccEEEEc-cCCCC-------------chHHHHHhcCCCcEEEEEeCC
Q 028002 134 GRKGW---PEFAPYDAIHVG-AAAPE-------------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 134 ~~~~~---~~~~~~D~V~~~-~~~~~-------------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+.... ...++||+|++. ..+++ +++++.++|||||++++.+++
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 76643 344789999997 55533 345788999999999998754
No 103
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.58 E-value=3.3e-14 Score=125.40 Aligned_cols=121 Identities=12% Similarity=0.107 Sum_probs=95.2
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
....+++.+. ..++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++............+++++++|
T Consensus 709 Rle~LLelL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 709 RVEYALKHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred HHHHHHHHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 3445566665 45789999999999999999998753557999999999999999998765422111223589999999
Q ss_pred CCCCCCCCCCccEEEEccCCCCch--------HHHHHhcCCCcEEEEEeCCC
Q 028002 134 GRKGWPEFAPYDAIHVGAAAPEIP--------QALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+.......+.||+|++...++++. +++.++|||| .+++++++.
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 988766668999999999987755 4568999999 888888774
No 104
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.58 E-value=1e-14 Score=114.27 Aligned_cols=111 Identities=17% Similarity=0.127 Sum_probs=88.1
Q ss_pred HHHHHHHHH---HhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE
Q 028002 54 MHATCLQLL---EENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH 130 (215)
Q Consensus 54 ~~~~~l~~l---~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~ 130 (215)
....+++.+ ...+.++.+|||+|||+|..+..+++. + .+++++|+|+.+++.+++++ ... ..++.+.
T Consensus 22 ~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~-~~~------~~~~~~~ 91 (263)
T 2yqz_A 22 VAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR-G--YRYIALDADAAMLEVFRQKI-AGV------DRKVQVV 91 (263)
T ss_dssp HHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT-T--CEEEEEESCHHHHHHHHHHT-TTS------CTTEEEE
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC-C--CEEEEEECCHHHHHHHHHHh-hcc------CCceEEE
Confidence 345555555 224677899999999999999999886 3 78999999999999999886 211 2589999
Q ss_pred eCCCCCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEe
Q 028002 131 VGDGRKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 131 ~~d~~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~ 174 (215)
.+|+.......++||+|++...++++ ++++.++|+|||.+++..
T Consensus 92 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 92 QADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp ESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEEe
Confidence 99997755445789999999887654 367889999999999873
No 105
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.58 E-value=2.4e-15 Score=118.02 Aligned_cols=119 Identities=25% Similarity=0.430 Sum_probs=87.0
Q ss_pred ccccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccC
Q 028002 41 MAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAP 120 (215)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 120 (215)
..++.+.+.+. ..+++.+.....++.+|||+|||+|.++..+++. ++ +++++|+++.+++.+++++..++.
T Consensus 97 ~~fgtg~~~tt----~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~-g~--~v~gvDi~~~~v~~a~~n~~~~~~-- 167 (254)
T 2nxc_A 97 MAFGTGHHETT----RLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL-GG--KALGVDIDPMVLPQAEANAKRNGV-- 167 (254)
T ss_dssp -----CCSHHH----HHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCGGGHHHHHHHHHHTTC--
T ss_pred ccccCCCCHHH----HHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh-CC--eEEEEECCHHHHHHHHHHHHHcCC--
Confidence 44555554432 3334444434677899999999999999998886 43 999999999999999999887543
Q ss_pred cccCCCeEEEeCCCCCCCCCCCCccEEEEccCCC---CchHHHHHhcCCCcEEEEEe
Q 028002 121 LLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAP---EIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 121 ~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~---~~~~~~~~~Lk~gG~lv~~~ 174 (215)
. +++..+|.....+. ++||+|+++...+ .+++.+.++|+|||+++++.
T Consensus 168 ----~-v~~~~~d~~~~~~~-~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 168 ----R-PRFLEGSLEAALPF-GPFDLLVANLYAELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp ----C-CEEEESCHHHHGGG-CCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----c-EEEEECChhhcCcC-CCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 3 78888887654333 6899999986543 35567889999999999964
No 106
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.58 E-value=2.1e-14 Score=114.48 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=86.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~ 144 (215)
+.++.+|||+|||+|..+..+++. +. .+++++|+++.+++.+++++...+.. .++.++.+|+..... ..++|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~f 134 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GI-GEYYGVDIAEVSINDARVRARNMKRR-----FKVFFRAQDSYGRHMDLGKEF 134 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TC-SEEEEEESCHHHHHHHHHHHHTSCCS-----SEEEEEESCTTTSCCCCSSCE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHhcCCC-----ccEEEEECCccccccCCCCCc
Confidence 578899999999999999988876 32 59999999999999999988765432 478999999887543 34789
Q ss_pred cEEEEccCCCC----------chHHHHHhcCCCcEEEEEeCCC
Q 028002 145 DAIHVGAAAPE----------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 145 D~V~~~~~~~~----------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|+|++...+++ +++++.++|+|||.+++.+++.
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 99999887744 3356889999999999988764
No 107
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.58 E-value=4.4e-15 Score=115.24 Aligned_cols=113 Identities=16% Similarity=0.193 Sum_probs=84.1
Q ss_pred ccch-hHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHH---hCCCCeEEEEecChHHHHHHHHHHHhhcccCccc
Q 028002 48 TISA-PHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALM---VGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLK 123 (215)
Q Consensus 48 ~~~~-~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~ 123 (215)
.+.+ |.....+...+. ..++.+|||+|||+|..+..+++. +++.++|+++|+++.+++.|+. ..
T Consensus 62 ~~~~~p~~~~~l~~~l~--~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~---- 129 (236)
T 2bm8_A 62 RMLKDPDTQAVYHDMLW--ELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DM---- 129 (236)
T ss_dssp ECCSCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GC----
T ss_pred cccCCHHHHHHHHHHHH--hcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cC----
Confidence 3444 666666666655 334679999999999999999987 3556899999999999887761 11
Q ss_pred CCCeEEEeCCCCCC--CC--CCCCccEEEEccCCCCc---hHHHHH-hcCCCcEEEEE
Q 028002 124 EGSLSVHVGDGRKG--WP--EFAPYDAIHVGAAAPEI---PQALID-QLKPGGRMVIP 173 (215)
Q Consensus 124 ~~~v~~~~~d~~~~--~~--~~~~~D~V~~~~~~~~~---~~~~~~-~Lk~gG~lv~~ 173 (215)
.+++++++|+... ++ ...+||+|+++...... +.++.+ +|||||+|++.
T Consensus 130 -~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 130 -ENITLHQGDCSDLTTFEHLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp -TTEEEEECCSSCSGGGGGGSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred -CceEEEECcchhHHHHHhhccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEE
Confidence 5899999998774 22 22379999988764333 345665 99999999994
No 108
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.58 E-value=3.5e-15 Score=119.30 Aligned_cols=109 Identities=24% Similarity=0.316 Sum_probs=82.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccC-------------------------
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAP------------------------- 120 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~------------------------- 120 (215)
..++.+|||+|||+|..+..+++.++. .+|+|+|+++.+++.|++++.......
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 346789999999999999999998644 799999999999999998865433110
Q ss_pred ---------------------------cccCCCeEEEeCCCCCCC-----CCCCCccEEEEccCCCC------------c
Q 028002 121 ---------------------------LLKEGSLSVHVGDGRKGW-----PEFAPYDAIHVGAAAPE------------I 156 (215)
Q Consensus 121 ---------------------------~~~~~~v~~~~~d~~~~~-----~~~~~~D~V~~~~~~~~------------~ 156 (215)
..-..++.+.++|+.... ...++||+|++...+++ +
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 000148999999987544 23478999999987643 3
Q ss_pred hHHHHHhcCCCcEEEEEeC
Q 028002 157 PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 157 ~~~~~~~Lk~gG~lv~~~~ 175 (215)
++++.++|+|||+|++...
T Consensus 203 l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHhCCCcEEEEecC
Confidence 4678899999999999643
No 109
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=1.6e-14 Score=113.72 Aligned_cols=105 Identities=12% Similarity=0.106 Sum_probs=84.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHh---hcccCcccCCCeEEEeCCCCCCC----
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEK---SAAAPLLKEGSLSVHVGDGRKGW---- 138 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~~~~~~~~~v~~~~~d~~~~~---- 138 (215)
..++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++.. ++.. ++++++.+|+.+..
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~-----~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFS-----ARIEVLEADVTLRAKARV 107 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTG-----GGEEEEECCTTCCHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCc-----ceEEEEeCCHHHHhhhhh
Confidence 4567899999999999999999984 557999999999999999999876 5443 46999999998752
Q ss_pred ---CCCCCccEEEEccCCCC------------------------chHHHHHhcCCCcEEEEEeCC
Q 028002 139 ---PEFAPYDAIHVGAAAPE------------------------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 139 ---~~~~~~D~V~~~~~~~~------------------------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
...++||+|++++++.. +++.+.++|+|||++++.++.
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 22378999999865432 345678899999999997765
No 110
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=6.1e-15 Score=111.40 Aligned_cols=96 Identities=23% Similarity=0.193 Sum_probs=81.0
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEE
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIH 148 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~ 148 (215)
+.+|||+|||+|..+..+++. + .+++++|+++.+++.++++. .++.++.+|+.+.....++||+|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~ 107 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-G--HQIEGLEPATRLVELARQTH-----------PSVTFHHGTITDLSDSPKRWAGLL 107 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-T--CCEEEECCCHHHHHHHHHHC-----------TTSEEECCCGGGGGGSCCCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC-----------CCCeEEeCcccccccCCCCeEEEE
Confidence 789999999999999999987 3 68999999999999998762 478999999877544447999999
Q ss_pred EccCCCCc--------hHHHHHhcCCCcEEEEEeCCCc
Q 028002 149 VGAAAPEI--------PQALIDQLKPGGRMVIPVGNIF 178 (215)
Q Consensus 149 ~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~~~~ 178 (215)
+...++++ ++++.++|+|||++++..++..
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 108 AWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp EESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred ehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 99887665 3578899999999999876543
No 111
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.58 E-value=1.1e-14 Score=110.27 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhc-CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC
Q 028002 54 MHATCLQLLEEN-LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG 132 (215)
Q Consensus 54 ~~~~~l~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~ 132 (215)
+...+++.+... ..++.+|||+|||+|..+..++... +..+++++|+++.+++.+++++...+. .++.+..+
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~ 122 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKL------ENIEPVQS 122 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC------SSEEEEEC
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEec
Confidence 345556655411 1147899999999999999999885 458999999999999999999887654 46999999
Q ss_pred CCCCCCCCCCCccEEEEccCC--CCchHHHHHhcCCCcEEEEEeCC
Q 028002 133 DGRKGWPEFAPYDAIHVGAAA--PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 133 d~~~~~~~~~~~D~V~~~~~~--~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+....+. ++||+|++.... ..+++.+.++|+|||++++..+.
T Consensus 123 d~~~~~~~-~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 123 RVEEFPSE-PPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp CTTTSCCC-SCEEEEECSCSSSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred chhhCCcc-CCcCEEEEeccCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99876533 789999976532 23556788899999999998764
No 112
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=2.2e-14 Score=113.63 Aligned_cols=104 Identities=16% Similarity=0.110 Sum_probs=88.6
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
.+.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++..++. .++.++.+|+.+. +..+.|
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l------~~~~~~~~d~~~~-~~~~~~ 187 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKL------NNVIPILADNRDV-ELKDVA 187 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTC------SSEEEEESCGGGC-CCTTCE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEECChHHc-CccCCc
Confidence 46788999999999999999999985 346999999999999999999988765 4788999999876 434689
Q ss_pred cEEEEccCC--CCchHHHHHhcCCCcEEEEEeCC
Q 028002 145 DAIHVGAAA--PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 145 D~V~~~~~~--~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+|+++.+. ..++..+.+.|+|||++++++..
T Consensus 188 D~Vi~d~p~~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 188 DRVIMGYVHKTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp EEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECCcccHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 999999874 45678889999999999987653
No 113
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.57 E-value=1.1e-14 Score=114.31 Aligned_cols=111 Identities=9% Similarity=0.011 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
....+++.+. +.++.+|||+|||+|.++..+++.. .+|+++|+|+.|++.+++++.... ...++...+
T Consensus 33 ~~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~~-------v~~~~~~~~ 100 (261)
T 3iv6_A 33 DRENDIFLEN--IVPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADRC-------VTIDLLDIT 100 (261)
T ss_dssp HHHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSSC-------CEEEECCTT
T ss_pred HHHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhcc-------ceeeeeecc
Confidence 4566677665 7788999999999999999999874 689999999999999998765420 122222222
Q ss_pred CCCCCCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEeCCC
Q 028002 134 GRKGWPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
........++||+|+++..++++ +..+.++| |||.++++++.+
T Consensus 101 ~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 101 AEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp SCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred cccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 20011113689999999887654 24567889 999999987653
No 114
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=5.2e-14 Score=104.13 Aligned_cols=114 Identities=16% Similarity=0.190 Sum_probs=90.2
Q ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe
Q 028002 48 TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL 127 (215)
Q Consensus 48 ~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v 127 (215)
....+.+...+++.+. ..++.+|||+|||+|..+..+++ +..+++++|+++.+++.+++++...+. .++
T Consensus 17 ~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~ 85 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLN--LNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNI------KNC 85 (183)
T ss_dssp CCCCHHHHHHHHHHHC--CCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTC------CSE
T ss_pred CcCHHHHHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCC------CcE
Confidence 3455556677777775 67788999999999999999987 237999999999999999999887654 479
Q ss_pred EEEeCCCCCCCCCCCCccEEEEccCCCC---chHHHHHhcCCCcEEEEEeCC
Q 028002 128 SVHVGDGRKGWPEFAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 128 ~~~~~d~~~~~~~~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+++.+|+.+..+. ++||+|++... .. +++.+.++ |||.+++..++
T Consensus 86 ~~~~~d~~~~~~~-~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 86 QIIKGRAEDVLDK-LEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp EEEESCHHHHGGG-CCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred EEEECCccccccC-CCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 9999998763333 68999999987 33 33445555 99999998765
No 115
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.57 E-value=1.3e-14 Score=113.29 Aligned_cols=100 Identities=15% Similarity=0.115 Sum_probs=83.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++... .++.++.+|+.......++||
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~~~~~fD 160 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--------PVGKFILASMETATLPPNTYD 160 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--------SEEEEEESCGGGCCCCSSCEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--------CceEEEEccHHHCCCCCCCeE
Confidence 4567899999999999999999885 268999999999999999876442 478999999877554447899
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEEeC
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+|++...++++ ++++.++|||||++++..+
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999887766 3567899999999999775
No 116
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.57 E-value=1.6e-14 Score=119.73 Aligned_cols=109 Identities=17% Similarity=0.176 Sum_probs=87.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccC--cccCCCeEEEeCCCCCC------
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAP--LLKEGSLSVHVGDGRKG------ 137 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~--~~~~~~v~~~~~d~~~~------ 137 (215)
..++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++....... .....++.++.+|+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4567899999999999999999987666899999999999999999876541100 01125899999998864
Q ss_pred CCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEe
Q 028002 138 WPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~ 174 (215)
....++||+|+++..++++ ++++.++|||||+|++..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 3344799999999887653 478899999999999964
No 117
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.57 E-value=6.2e-15 Score=115.30 Aligned_cols=103 Identities=21% Similarity=0.211 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC---CCC
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE---FAP 143 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~ 143 (215)
.++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...+. .+++++++|+.+.... .++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l------~~v~~~~~d~~~~~~~~~~~~~ 151 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGL------KGARALWGRAEVLAREAGHREA 151 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEECCHHHHTTSTTTTTC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC------CceEEEECcHHHhhcccccCCC
Confidence 457899999999999999999884 568999999999999999999988765 4699999998764432 368
Q ss_pred ccEEEEccCC--CCchHHHHHhcCCCcEEEEEeCC
Q 028002 144 YDAIHVGAAA--PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 144 ~D~V~~~~~~--~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
||+|++.... ..+++.+.++|||||++++..+.
T Consensus 152 fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 152 YARAVARAVAPLCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp EEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEECS
T ss_pred ceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9999998654 34567788999999999987653
No 118
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.57 E-value=3e-14 Score=119.09 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=91.9
Q ss_pred ccCCcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHH-------HHHHHh
Q 028002 43 IGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSS-------IQNIEK 115 (215)
Q Consensus 43 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a-------~~~~~~ 115 (215)
..+|... |..+..+++.+. +.++.+|||+|||+|.++..+++..+. .+|+|+|+++.+++.| ++++..
T Consensus 221 ~~yGet~--p~~v~~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~ar~~~~~ 295 (433)
T 1u2z_A 221 YVYGELL--PNFLSDVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEELKKRCKL 295 (433)
T ss_dssp GCCCCBC--HHHHHHHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc--HHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHHHHHHHHH
Confidence 3444443 677888888876 788999999999999999999998643 5899999999999988 777766
Q ss_pred hcccCcccCCCeEEEeCCCCCC-CC---CCCCccEEEEccCCC-----CchHHHHHhcCCCcEEEEE
Q 028002 116 SAAAPLLKEGSLSVHVGDGRKG-WP---EFAPYDAIHVGAAAP-----EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 116 ~~~~~~~~~~~v~~~~~d~~~~-~~---~~~~~D~V~~~~~~~-----~~~~~~~~~Lk~gG~lv~~ 173 (215)
.+. ...+++++.+|.... ++ ..++||+|+++..+. ..+.++.+.|||||.++++
T Consensus 296 ~Gl----~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 296 YGM----RLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp TTB----CCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cCC----CCCceEEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 552 125899998765422 11 126899999875442 2335788999999999996
No 119
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.57 E-value=1.6e-14 Score=111.90 Aligned_cols=112 Identities=18% Similarity=0.133 Sum_probs=89.2
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
....+.+.+.....++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++...+ .++.+..+|
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~s~~~~~~a~~~~~~~~-------~~~~~~~~d 92 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK-F--KNTWAVDLSQEMLSEAENKFRSQG-------LKPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG-S--SEEEEECSCHHHHHHHHHHHHHTT-------CCCEEECCC
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC-C--CcEEEEECCHHHHHHHHHHHhhcC-------CCeEEEecc
Confidence 345555665533346789999999999999999887 3 689999999999999999886643 268899999
Q ss_pred CCCCCCCCCCccEEEEcc-CCCCc---------hHHHHHhcCCCcEEEEEeCC
Q 028002 134 GRKGWPEFAPYDAIHVGA-AAPEI---------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~-~~~~~---------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+...... ++||+|++.. .++++ ++++.++|+|||++++.+++
T Consensus 93 ~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 93 ISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 8775544 7899999998 77665 24678999999999997764
No 120
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.57 E-value=2.3e-14 Score=114.00 Aligned_cols=106 Identities=18% Similarity=0.171 Sum_probs=86.6
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+. ..++.+|||+|||+|..+..+++. + .+|+++|+++.+++.+++++...+ .++.+..+|+.
T Consensus 110 ~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~-g--~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~ 177 (286)
T 3m70_A 110 GDVVDAAK--IISPCKVLDLGCGQGRNSLYLSLL-G--YDVTSWDHNENSIAFLNETKEKEN-------LNISTALYDIN 177 (286)
T ss_dssp HHHHHHHH--HSCSCEEEEESCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCGG
T ss_pred HHHHHHhh--ccCCCcEEEECCCCCHHHHHHHHC-C--CeEEEEECCHHHHHHHHHHHHHcC-------CceEEEEeccc
Confidence 34555555 347889999999999999999987 3 689999999999999999987754 27899999988
Q ss_pred CCCCCCCCccEEEEccCCCC--------chHHHHHhcCCCcEEEEEe
Q 028002 136 KGWPEFAPYDAIHVGAAAPE--------IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~~--------~~~~~~~~Lk~gG~lv~~~ 174 (215)
.... .++||+|++...+++ +++.+.++|+|||.+++..
T Consensus 178 ~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 178 AANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7655 489999999987754 3457889999999987754
No 121
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.57 E-value=3.4e-15 Score=118.39 Aligned_cols=106 Identities=23% Similarity=0.197 Sum_probs=86.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC----CC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----EF 141 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~ 141 (215)
..++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++...+. .+++++.+|+..... ..
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------LNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCHHHHHHHHHHTT
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------CcEEEEeCChHhcchhhhhcc
Confidence 67889999999999999999998864447999999999999999999987654 489999999865432 13
Q ss_pred CCccEEEEccCCC------------------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 142 APYDAIHVGAAAP------------------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 142 ~~~D~V~~~~~~~------------------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+.||+|+++.++. .+++.+.++|||||+|++++++.
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 6899999986542 23456788999999999987653
No 122
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.57 E-value=1.3e-14 Score=110.38 Aligned_cols=97 Identities=23% Similarity=0.327 Sum_probs=80.1
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
.+.++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++ ++.+..+|+.... ..++|
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~------------~~~~~~~d~~~~~-~~~~f 103 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA-G--FDVDATDGSPELAAEASRRL------------GRPVRTMLFHQLD-AIDAY 103 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHH------------TSCCEECCGGGCC-CCSCE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc-C--CeEEEECCCHHHHHHHHHhc------------CCceEEeeeccCC-CCCcE
Confidence 4667899999999999999999987 3 69999999999999998875 3456677776655 44899
Q ss_pred cEEEEccCCCCch--------HHHHHhcCCCcEEEEEeCCC
Q 028002 145 DAIHVGAAAPEIP--------QALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 145 D~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|+|++...++++. +++.++|||||++++.++..
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 9999998886654 57889999999999987653
No 123
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.57 E-value=4.2e-15 Score=115.16 Aligned_cols=99 Identities=14% Similarity=0.022 Sum_probs=77.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC--CCCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG--WPEFAP 143 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~ 143 (215)
..++.+|||+|||+|..+..+++. ++ .+++++|+|+.+++.|+++....+ .++.++.+|+.+. ....++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~~ 128 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA-PI-DEHWIIECNDGVFQRLRDWAPRQT-------HKVIPLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS-CE-EEEEEEECCHHHHHHHHHHGGGCS-------SEEEEEESCHHHHGGGSCTTC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc-CC-CeEEEEcCCHHHHHHHHHHHHhcC-------CCeEEEecCHHHhhcccCCCc
Confidence 467889999999999999999764 33 589999999999999998775533 4789999998764 333478
Q ss_pred ccEEEE-ccCC-----C-----CchHHHHHhcCCCcEEEEE
Q 028002 144 YDAIHV-GAAA-----P-----EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 144 ~D~V~~-~~~~-----~-----~~~~~~~~~Lk~gG~lv~~ 173 (215)
||+|++ .... + .+++++.++|||||+|++.
T Consensus 129 fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 999999 3221 1 1256789999999999975
No 124
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.56 E-value=3e-14 Score=111.15 Aligned_cols=100 Identities=20% Similarity=0.228 Sum_probs=81.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++. + .+++++|+|+.+++.+++++...+ .++.++.+|+...... ++||
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~-~--~~v~gvD~s~~~l~~a~~~~~~~~-------~~v~~~~~d~~~~~~~-~~fD 107 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER-G--YEVVGLDLHEEMLRVARRKAKERN-------LKIEFLQGDVLEIAFK-NEFD 107 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTT-------CCCEEEESCGGGCCCC-SCEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC-C--CeEEEEECCHHHHHHHHHHHHhcC-------CceEEEECChhhcccC-CCcc
Confidence 356789999999999999999987 3 689999999999999999887643 3689999998875444 6899
Q ss_pred EEEEccCC-C--------CchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAA-P--------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~-~--------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++.... . .+++.+.++|+|||.+++.+++
T Consensus 108 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 108 AVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 99986432 1 2345788999999999998765
No 125
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.56 E-value=1.1e-14 Score=112.92 Aligned_cols=100 Identities=16% Similarity=0.235 Sum_probs=82.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++. +. .+++++|+++.+++.++++... .++.+..+|+.......++||
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEH-GA-SYVLGLDLSEKMLARARAAGPD---------TGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHTSCS---------SSEEEEECCGGGCCCCTTCEE
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHC-CC-CeEEEEcCCHHHHHHHHHhccc---------CCceEEEcChhhccCCCCCce
Confidence 457889999999999999999887 33 4899999999999999876432 478999999877554447899
Q ss_pred EEEEccCCCCc------hHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAPEI------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++...++++ ++++.++|+|||++++.+++
T Consensus 110 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 110 LAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 99999877554 46788999999999998755
No 126
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.56 E-value=3e-14 Score=111.12 Aligned_cols=110 Identities=17% Similarity=0.128 Sum_probs=85.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcc--cCCCeEEEeCCCCCCC---CC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLL--KEGSLSVHVGDGRKGW---PE 140 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~--~~~~v~~~~~d~~~~~---~~ 140 (215)
+.++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.+++++......... ...++.++.+|+.+.+ ..
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 4567899999999999999999984 6579999999999999999988765211100 2258999999987633 23
Q ss_pred CCCccEEEEccCCC--------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 141 FAPYDAIHVGAAAP--------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 141 ~~~~D~V~~~~~~~--------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.+.+|.|+...+.+ .++..+.++|+|||.|++.+..
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 47899987665443 4667889999999999997654
No 127
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.56 E-value=1.4e-14 Score=111.42 Aligned_cols=101 Identities=26% Similarity=0.372 Sum_probs=82.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC---CCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW---PEFA 142 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~ 142 (215)
+.++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.+++++... .++.++.+|+.... ...+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--------~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--------RNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--------TTEEEEECCTTCGGGGTTTCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--------CCCEEEEccCCCcchhhcccC
Confidence 567889999999999999999998766689999999999999998877542 48999999987621 1225
Q ss_pred CccEEEEccCCCC----chHHHHHhcCCCcEEEEEe
Q 028002 143 PYDAIHVGAAAPE----IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 143 ~~D~V~~~~~~~~----~~~~~~~~Lk~gG~lv~~~ 174 (215)
+||+|+++.+... ++.++.++|||||++++.+
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 8999999877543 2577899999999999974
No 128
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.56 E-value=2.3e-14 Score=111.00 Aligned_cols=105 Identities=24% Similarity=0.287 Sum_probs=83.9
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC
Q 028002 60 QLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP 139 (215)
Q Consensus 60 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 139 (215)
+.+...+.++.+|||+|||+|..+..+++. .+++++|+++.+++.+++++...+ .++.+..+|+.....
T Consensus 25 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 25 AWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-------RHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-------CCCEEEECCGGGCCC
T ss_pred HHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-------CceEEEEcChhhcCC
Confidence 333334667799999999999999888765 589999999999999999887643 478999999877544
Q ss_pred CCCCccEEEEcc-CCCCc---------hHHHHHhcCCCcEEEEEeCC
Q 028002 140 EFAPYDAIHVGA-AAPEI---------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 140 ~~~~~D~V~~~~-~~~~~---------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
. ++||+|++.. .++++ ++.+.++|+|||.+++.+++
T Consensus 94 ~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 94 P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 4 7899999875 55443 35678999999999997754
No 129
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=5.7e-16 Score=117.69 Aligned_cols=113 Identities=20% Similarity=0.312 Sum_probs=68.3
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
+...+++.+. ...++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...+. +++++++|
T Consensus 17 ~~~~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-------~~~~~~~d 87 (215)
T 4dzr_A 17 LVEEAIRFLK-RMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA-------VVDWAAAD 87 (215)
T ss_dssp HHHHHHHHHT-TCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------------CCHHH
T ss_pred HHHHHHHHhh-hcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC-------ceEEEEcc
Confidence 3444455543 12678899999999999999999984 557999999999999999988766431 57777777
Q ss_pred CCCCCCC----CCCccEEEEccCCCC--------------------------------chHHHHHhcCCCcE-EEEEeC
Q 028002 134 GRKGWPE----FAPYDAIHVGAAAPE--------------------------------IPQALIDQLKPGGR-MVIPVG 175 (215)
Q Consensus 134 ~~~~~~~----~~~~D~V~~~~~~~~--------------------------------~~~~~~~~Lk~gG~-lv~~~~ 175 (215)
+.+.... .++||+|+++.++.. +++.+.++|||||+ +++.++
T Consensus 88 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 88 GIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 7652221 278999999866521 22345688999999 666654
No 130
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.56 E-value=6.9e-15 Score=113.21 Aligned_cols=111 Identities=23% Similarity=0.275 Sum_probs=87.5
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC
Q 028002 57 TCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK 136 (215)
Q Consensus 57 ~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~ 136 (215)
.++..+. ...++.+|||+|||+|..+..+++.+++..+++++|+++.+++.+++++...+.. .+++++.+|+.+
T Consensus 59 ~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-----~~i~~~~~d~~~ 132 (229)
T 2avd_A 59 QLLANLA-RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE-----HKIDLRLKPALE 132 (229)
T ss_dssp HHHHHHH-HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT-----TTEEEEESCHHH
T ss_pred HHHHHHH-HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-----CeEEEEEcCHHH
Confidence 3444443 2556789999999999999999987644589999999999999999999876653 589999998754
Q ss_pred CCCC---C---CCccEEEEccCCC---CchHHHHHhcCCCcEEEEE
Q 028002 137 GWPE---F---APYDAIHVGAAAP---EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 137 ~~~~---~---~~~D~V~~~~~~~---~~~~~~~~~Lk~gG~lv~~ 173 (215)
.... . ++||+|+++.... .+++.+.++|+|||++++.
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 3211 1 5799999988755 3567888999999999984
No 131
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.56 E-value=1.4e-14 Score=112.49 Aligned_cols=113 Identities=19% Similarity=0.241 Sum_probs=89.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...++..+.. ..++.+|||+|||+|+.+..+++.+++.++++++|+++.+++.|++++...+.. ++++++.+|+
T Consensus 58 ~~~~l~~l~~-~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-----~~i~~~~gda 131 (237)
T 3c3y_A 58 AGQLMSFVLK-LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE-----HKINFIESDA 131 (237)
T ss_dssp HHHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-----GGEEEEESCH
T ss_pred HHHHHHHHHH-hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEEcCH
Confidence 3445555432 445689999999999999999998754689999999999999999999876653 5799999998
Q ss_pred CCCCC-------CCCCccEEEEccCCCC---chHHHHHhcCCCcEEEEE
Q 028002 135 RKGWP-------EFAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 135 ~~~~~-------~~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~ 173 (215)
.+..+ ..++||+|+++..... +++.+.++|+|||++++.
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence 65322 1368999999876543 457788999999999885
No 132
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=1.9e-14 Score=114.09 Aligned_cols=104 Identities=32% Similarity=0.425 Sum_probs=85.4
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+. ..++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.+++++ .++.+..+|+.
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~ 110 (279)
T 3ccf_A 47 EDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQS---GAEVLGTDNAATMIEKARQNY-----------PHLHFDVADAR 110 (279)
T ss_dssp CHHHHHHC--CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----------TTSCEEECCTT
T ss_pred HHHHHHhC--CCCCCEEEEecCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHhhC-----------CCCEEEECChh
Confidence 44556665 677889999999999999999883 279999999999999998753 36788999987
Q ss_pred CCCCCCCCccEEEEccCCCC------chHHHHHhcCCCcEEEEEeCC
Q 028002 136 KGWPEFAPYDAIHVGAAAPE------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~~------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.... .++||+|++...+++ +++++.++|||||++++.+++
T Consensus 111 ~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 111 NFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp TCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 7544 378999999988765 346789999999999997764
No 133
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.55 E-value=1.4e-14 Score=110.21 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=86.0
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..++..+.. ..++.+|||+|||+|..+..+++.+++.++++++|+++.+++.|++++...+.. ++++++.+|..
T Consensus 45 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~ 118 (210)
T 3c3p_A 45 GRLLYLLAR-IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI-----DRVELQVGDPL 118 (210)
T ss_dssp HHHHHHHHH-HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG-----GGEEEEESCHH
T ss_pred HHHHHHHHH-hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-----ceEEEEEecHH
Confidence 344444331 345679999999999999999988643589999999999999999999876653 57999999986
Q ss_pred CCCC-CCCCccEEEEccCCCC---chHHHHHhcCCCcEEEEE
Q 028002 136 KGWP-EFAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 136 ~~~~-~~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~ 173 (215)
+..+ ..+ ||+|+++..... +++.+.++|+|||++++.
T Consensus 119 ~~~~~~~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp HHHTTCCS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHhccCCC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence 5322 225 999999876543 456788999999999984
No 134
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.55 E-value=2.9e-14 Score=114.21 Aligned_cols=114 Identities=13% Similarity=0.179 Sum_probs=86.7
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
....+++.+. .++.+|||+|||+|.++..+++. + .+|+++|+++.+++.+++++...+.. ...+++++++|
T Consensus 71 ~~~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~-~--~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~v~~~~~d 141 (299)
T 3g2m_A 71 EAREFATRTG---PVSGPVLELAAGMGRLTFPFLDL-G--WEVTALELSTSVLAAFRKRLAEAPAD---VRDRCTLVQGD 141 (299)
T ss_dssp HHHHHHHHHC---CCCSCEEEETCTTTTTHHHHHTT-T--CCEEEEESCHHHHHHHHHHHHTSCHH---HHTTEEEEECB
T ss_pred HHHHHHHhhC---CCCCcEEEEeccCCHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHhhcccc---cccceEEEeCc
Confidence 3455555553 33459999999999999999987 3 68999999999999999988764310 00379999999
Q ss_pred CCCCCCCCCCccEEEEcc-CCC--------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 134 GRKGWPEFAPYDAIHVGA-AAP--------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~-~~~--------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+..... .++||+|++.. .++ .+++++.++|||||+|++.+++.
T Consensus 142 ~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 142 MSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp TTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred hhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 987655 48999998653 232 23467889999999999988664
No 135
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=3.6e-15 Score=115.74 Aligned_cols=99 Identities=14% Similarity=0.033 Sum_probs=77.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC--CCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW--PEFAP 143 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~ 143 (215)
..++.+|||||||+|..+..+++. .+ .+++++|+++.+++.|+++....+ .++.++.+++.... ...++
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~-~~-~~v~~id~~~~~~~~a~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~ 128 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEA-PI-DEHWIIECNDGVFQRLRDWAPRQT-------HKVIPLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTS-CE-EEEEEEECCHHHHHHHHHHGGGCS-------SEEEEEESCHHHHGGGSCTTC
T ss_pred ccCCCeEEEECCCccHHHHHHHHh-CC-cEEEEEeCCHHHHHHHHHHHhhCC-------CceEEEeehHHhhcccccccC
Confidence 567899999999999999999876 34 689999999999999999876543 47788888865421 23378
Q ss_pred ccEEEEccCC-----CC------chHHHHHhcCCCcEEEEE
Q 028002 144 YDAIHVGAAA-----PE------IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 144 ~D~V~~~~~~-----~~------~~~~~~~~Lk~gG~lv~~ 173 (215)
||.|+.+... .+ +.+++.++|||||+|++.
T Consensus 129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 9999876543 22 335789999999999874
No 136
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.55 E-value=1.2e-14 Score=112.88 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=83.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC---CCC
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE---FAP 143 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~ 143 (215)
.++.+|||+|||+|..+..++.. .+..+|+++|+++.+++.+++++...+. .+++++++|+.+.... .++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~ 141 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKIC-FPHLHVTIVDSLNKRITFLEKLSEALQL------ENTTFCHDRAETFGQRKDVRES 141 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEESCHHHHTTCTTTTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEeccHHHhcccccccCC
Confidence 46789999999999999999876 3557999999999999999999887664 4799999988654321 368
Q ss_pred ccEEEEccCC--CCchHHHHHhcCCCcEEEEEeCC
Q 028002 144 YDAIHVGAAA--PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 144 ~D~V~~~~~~--~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
||+|++.... ..+++.+.++|+|||.+++..+.
T Consensus 142 fD~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~~g~ 176 (240)
T 1xdz_A 142 YDIVTARAVARLSVLSELCLPLVKKNGLFVALKAA 176 (240)
T ss_dssp EEEEEEECCSCHHHHHHHHGGGEEEEEEEEEEECC
T ss_pred ccEEEEeccCCHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 9999988743 23456778999999999987543
No 137
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.55 E-value=2.6e-14 Score=110.02 Aligned_cols=106 Identities=18% Similarity=0.195 Sum_probs=85.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
+.++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++...+... ....++.+..+|........++||
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-G--YSVTGIDINSEAIRLAETAARSPGLNQ-KTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHTTCCSCCS-SSSCEEEEEECCTTSCCSCTTCEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-C--CeEEEEECCHHHHHHHHHHHHhcCCcc-ccCcceEEEEecccccCCCCCcee
Confidence 667899999999999999999987 3 699999999999999998876644311 112368999999887655557899
Q ss_pred EEEEccCCCCc---------hHHHHHhcCCCcEEEEEeC
Q 028002 146 AIHVGAAAPEI---------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 146 ~V~~~~~~~~~---------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+|++...++++ ++++.++|+|||++++...
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 99998876543 4567899999999999754
No 138
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.54 E-value=4.5e-14 Score=116.36 Aligned_cols=116 Identities=19% Similarity=0.129 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHh-------hcccCccc
Q 028002 51 APHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEK-------SAAAPLLK 123 (215)
Q Consensus 51 ~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~~~~~~~ 123 (215)
.+..+..+++.+. +.++.+|||+|||+|..+..++...+ ..+++|+|+++.+++.|+++... .+. .
T Consensus 158 ~~~~i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl----~ 230 (438)
T 3uwp_A 158 SFDLVAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGK----K 230 (438)
T ss_dssp HHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB----C
T ss_pred CHHHHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC----C
Confidence 4556778888876 88999999999999999999998754 35799999999999999876532 222 1
Q ss_pred CCCeEEEeCCCCCCCCCC--CCccEEEEccCCCC-----chHHHHHhcCCCcEEEEE
Q 028002 124 EGSLSVHVGDGRKGWPEF--APYDAIHVGAAAPE-----IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 124 ~~~v~~~~~d~~~~~~~~--~~~D~V~~~~~~~~-----~~~~~~~~Lk~gG~lv~~ 173 (215)
..+++++++|+.+..... +.||+|+++..+.. .+.++.+.|||||+|++.
T Consensus 231 ~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 231 HAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CCEEEEEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CCCeEEEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 258999999998743321 36999999876422 234678999999999985
No 139
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.54 E-value=4.6e-14 Score=109.04 Aligned_cols=103 Identities=25% Similarity=0.356 Sum_probs=83.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC---CCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW---PEFA 142 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~ 142 (215)
+.++.+|||+|||+|.++..+++..++.++++++|+++.+++.+.++.... .++.++.+|+.... ...+
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--------~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--------TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--------TTEEEECSCTTCGGGGGGGCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--------CCeEEEEcccCChhhhcccCC
Confidence 567889999999999999999998766689999999999888877766542 47899999987632 1236
Q ss_pred CccEEEEccCCCC----chHHHHHhcCCCcEEEEEeCC
Q 028002 143 PYDAIHVGAAAPE----IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 143 ~~D~V~~~~~~~~----~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+||+|+++.+..+ +..++.+.|||||.+++.+..
T Consensus 147 ~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 147 MVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 8999999876443 245688999999999997654
No 140
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.54 E-value=5.4e-14 Score=113.37 Aligned_cols=122 Identities=16% Similarity=0.084 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccC-cccCCCeEEEeC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAP-LLKEGSLSVHVG 132 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~-~~~~~~v~~~~~ 132 (215)
+...+++.+.....++.+|||+|||+|..+..+++. +..+++++|+++.+++.+++++....... .....++.++++
T Consensus 20 l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 97 (313)
T 3bgv_A 20 LIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITA 97 (313)
T ss_dssp HHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC
T ss_pred HHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEe
Confidence 344555555533457789999999999999998874 23799999999999999999886542100 001147899999
Q ss_pred CCCCCC----C--CCCCccEEEEccCCCCc----------hHHHHHhcCCCcEEEEEeCCC
Q 028002 133 DGRKGW----P--EFAPYDAIHVGAAAPEI----------PQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 133 d~~~~~----~--~~~~~D~V~~~~~~~~~----------~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|+.... . ..++||+|++...++++ ++++.++|||||.+++++++.
T Consensus 98 D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 98 DSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 987653 2 23589999999888554 356789999999999998864
No 141
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.54 E-value=7.2e-14 Score=107.90 Aligned_cols=106 Identities=19% Similarity=0.273 Sum_probs=83.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+.+.+.....++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++ .++.+..+|+
T Consensus 27 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~ 92 (239)
T 3bxo_A 27 ASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----------PDATLHQGDM 92 (239)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----------TTCEEEECCT
T ss_pred HHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----------CCCEEEECCH
Confidence 334445554445678899999999999999999986 48999999999999998753 4688999998
Q ss_pred CCCCCCCCCccEEEEcc-CCCCc---------hHHHHHhcCCCcEEEEEeC
Q 028002 135 RKGWPEFAPYDAIHVGA-AAPEI---------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~-~~~~~---------~~~~~~~Lk~gG~lv~~~~ 175 (215)
..... .++||+|++.. .++++ ++.+.++|+|||.+++...
T Consensus 93 ~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 93 RDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp TTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 77544 47899999654 44433 3568899999999999754
No 142
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.54 E-value=6.2e-14 Score=110.46 Aligned_cols=109 Identities=24% Similarity=0.301 Sum_probs=86.1
Q ss_pred HHHHHHHHhcC-CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 56 ATCLQLLEENL-KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 56 ~~~l~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
..+.+.+.... .++.+|||+|||+|.++..+++.+ +..+++++|+++.+++.++++. .++.+..+|.
T Consensus 72 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~ 139 (269)
T 1p91_A 72 DAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY-----------PQVTFCVASS 139 (269)
T ss_dssp HHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC-----------TTSEEEECCT
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcch
Confidence 33444443323 578899999999999999999875 3479999999999999998753 4678899988
Q ss_pred CCCCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEEeCCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
.......++||+|++... ...++++.++|||||.+++..++.
T Consensus 140 ~~~~~~~~~fD~v~~~~~-~~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 140 HRLPFSDTSMDAIIRIYA-PCKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp TSCSBCTTCEEEEEEESC-CCCHHHHHHHEEEEEEEEEEEECT
T ss_pred hhCCCCCCceeEEEEeCC-hhhHHHHHHhcCCCcEEEEEEcCH
Confidence 765444478999998765 467899999999999999987653
No 143
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=2.2e-14 Score=112.71 Aligned_cols=108 Identities=18% Similarity=0.124 Sum_probs=85.9
Q ss_pred hhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE
Q 028002 51 APHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH 130 (215)
Q Consensus 51 ~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~ 130 (215)
.+.+...+++.+. ..++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.++++ .++.++
T Consensus 19 ~~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~------------~~~~~~ 81 (261)
T 3ege_A 19 DIRIVNAIINLLN--LPKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSIVMRQQAVVH------------PQVEWF 81 (261)
T ss_dssp CHHHHHHHHHHHC--CCTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHSSCCC------------TTEEEE
T ss_pred cHHHHHHHHHHhC--CCCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCHHHHHHHHhc------------cCCEEE
Confidence 3445666777765 677899999999999999999874 27999999999998876532 278999
Q ss_pred eCCCCCCCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeCC
Q 028002 131 VGDGRKGWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 131 ~~d~~~~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.+|+.+.....++||+|++...++++ ++++.++|| ||++++...+
T Consensus 82 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 82 TGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp CCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred ECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 99998755555899999999887654 467899999 9987776544
No 144
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.54 E-value=3.9e-14 Score=120.24 Aligned_cols=103 Identities=20% Similarity=0.266 Sum_probs=85.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCccE
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYDA 146 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~ 146 (215)
++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++...+. .++.++.+|+..... ..+.||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------SNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCCSTTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCCHHHhhhhccccCCE
Confidence 889999999999999999999876568999999999999999999988765 579999999876432 2368999
Q ss_pred EEEccCCC----------------------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 147 IHVGAAAP----------------------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 147 V~~~~~~~----------------------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+++.++. .+++.+.++|||||+|++++++
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 99976541 1235577899999999998765
No 145
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.54 E-value=1.6e-14 Score=115.96 Aligned_cols=108 Identities=14% Similarity=0.055 Sum_probs=77.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC--------CC
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG--------WP 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~--------~~ 139 (215)
++.+|||+|||+|..+..++.. + ..+|+|+|+|+.+++.|+++....+......+-++++.+.++... ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-E-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-C-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 4789999999999866666554 2 268999999999999999988664321000001366777776321 12
Q ss_pred CCCCccEEEEccCCCC---------chHHHHHhcCCCcEEEEEeCCC
Q 028002 140 EFAPYDAIHVGAAAPE---------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 140 ~~~~~D~V~~~~~~~~---------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
..++||+|+|...++. +++++.++|||||++++++++.
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 2378999998876532 3467899999999999998864
No 146
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.54 E-value=5.6e-14 Score=108.44 Aligned_cols=99 Identities=20% Similarity=0.245 Sum_probs=81.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC----CCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK----GWPEF 141 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~ 141 (215)
+.++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.+++++... .++.++.+|+.. ....
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--------~~v~~~~~d~~~~~~~~~~~- 141 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--------ENIIPILGDANKPQEYANIV- 141 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--------TTEEEEECCTTCGGGGTTTS-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--------CCeEEEECCCCCcccccccC-
Confidence 56788999999999999999999865 579999999999999998876432 589999999876 4334
Q ss_pred CCccEEEEccCCC----CchHHHHHhcCCCcEEEEEe
Q 028002 142 APYDAIHVGAAAP----EIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 142 ~~~D~V~~~~~~~----~~~~~~~~~Lk~gG~lv~~~ 174 (215)
++||+|+...... .+++++.+.|+|||.+++.+
T Consensus 142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 6899999764433 24678899999999999963
No 147
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.54 E-value=1.6e-14 Score=112.05 Aligned_cols=101 Identities=20% Similarity=0.195 Sum_probs=82.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
++.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++...+. .++.++.+|+.......++||+|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD~v 150 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGK------RVRNYFCCGLQDFTPEPDSYDVI 150 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGG------GEEEEEECCGGGCCCCSSCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCC------ceEEEEEcChhhcCCCCCCEEEE
Confidence 57899999999999999988774 26999999999999999998766431 47889999987665554689999
Q ss_pred EEccCCCCc--------hHHHHHhcCCCcEEEEEeCC
Q 028002 148 HVGAAAPEI--------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 148 ~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
++...++++ ++++.++|+|||++++..+.
T Consensus 151 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 151 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 999876554 35678999999999996543
No 148
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.53 E-value=7.6e-15 Score=108.79 Aligned_cols=106 Identities=11% Similarity=0.010 Sum_probs=82.1
Q ss_pred HHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC
Q 028002 58 CLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG 137 (215)
Q Consensus 58 ~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~ 137 (215)
+...+..++.+..+|||+|||+|.++..++.. .|..+|+++|+|+.+++.+++++...+.. .++.+ .|....
T Consensus 39 fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~-~p~a~~~A~Di~~~~leiar~~~~~~g~~-----~~v~~--~d~~~~ 110 (200)
T 3fzg_A 39 FYTYVFGNIKHVSSILDFGCGFNPLALYQWNE-NEKIIYHAYDIDRAEIAFLSSIIGKLKTT-----IKYRF--LNKESD 110 (200)
T ss_dssp HHHHHHHHSCCCSEEEEETCTTHHHHHHHHCS-SCCCEEEEECSCHHHHHHHHHHHHHSCCS-----SEEEE--ECCHHH
T ss_pred HHHHHHhhcCCCCeEEEecCCCCHHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC-----ccEEE--eccccc
Confidence 33333334677899999999999999999877 46679999999999999999999886653 24555 555544
Q ss_pred CCCCCCccEEEEccCCCCch------HHHHHhcCCCcEEEE
Q 028002 138 WPEFAPYDAIHVGAAAPEIP------QALIDQLKPGGRMVI 172 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~~------~~~~~~Lk~gG~lv~ 172 (215)
.++ ++||+|+....+|.+. ..+.+.|+|||.+|-
T Consensus 111 ~~~-~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 111 VYK-GTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp HTT-SEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred CCC-CCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 443 7899999998886652 368999999998764
No 149
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.53 E-value=2.7e-14 Score=110.75 Aligned_cols=96 Identities=18% Similarity=0.154 Sum_probs=77.7
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC--CCCCC
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG--WPEFA 142 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~ 142 (215)
.+.++.+|||+|||+|.++..+++. + .+++++|+|+.+++.+++ ++.++.+|..+. ....+
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~s~~~~~~a~~--------------~~~~~~~d~~~~~~~~~~~ 100 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEE-G--IESIGVDINEDMIKFCEG--------------KFNVVKSDAIEYLKSLPDK 100 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHH-T--CCEEEECSCHHHHHHHHT--------------TSEEECSCHHHHHHTSCTT
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhC-C--CcEEEEECCHHHHHHHHh--------------hcceeeccHHHHhhhcCCC
Confidence 4567899999999999999999887 3 579999999999998874 367778877653 22337
Q ss_pred CccEEEEccCCCCch--------HHHHHhcCCCcEEEEEeCCC
Q 028002 143 PYDAIHVGAAAPEIP--------QALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 143 ~~D~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+||+|++...++++. +++.++|||||++++.+++.
T Consensus 101 ~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 101 YLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp CBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred CeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 899999998876543 57889999999999988664
No 150
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.53 E-value=5e-15 Score=114.91 Aligned_cols=110 Identities=16% Similarity=0.080 Sum_probs=87.2
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+...+. ...++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++++...+.. .+++++++|+
T Consensus 66 ~~~l~~~~~-~~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~~d~ 136 (241)
T 3gdh_A 66 AEHIAGRVS-QSFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIA-----DKIEFICGDF 136 (241)
T ss_dssp HHHHHHHHH-HHSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCG-----GGEEEEESCH
T ss_pred HHHHHHHhh-hccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCC-----cCeEEEECCh
Confidence 444444443 23468999999999999999999873 79999999999999999999876653 4899999998
Q ss_pred CCCCCCCCCccEEEEccCCCCch------HHHHHhcCCCcEEEEEe
Q 028002 135 RKGWPEFAPYDAIHVGAAAPEIP------QALIDQLKPGGRMVIPV 174 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~~~------~~~~~~Lk~gG~lv~~~ 174 (215)
..... .++||+|+++.++++.. .++.++|+|||.+++..
T Consensus 137 ~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 137 LLLAS-FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp HHHGG-GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred HHhcc-cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 76543 37899999998886533 24678899999877653
No 151
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.53 E-value=1e-14 Score=112.85 Aligned_cols=112 Identities=25% Similarity=0.362 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..++..+.. ..++.+|||+|||+|..+..+++.+++.++++++|+++.+++.|++++...+.. ++++++.+|+.
T Consensus 61 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-----~~i~~~~~d~~ 134 (232)
T 3cbg_A 61 AQFLGLLIS-LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA-----EKISLRLGPAL 134 (232)
T ss_dssp HHHHHHHHH-HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-----GGEEEEESCHH
T ss_pred HHHHHHHHH-hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEEcCHH
Confidence 344444331 445679999999999999999988654579999999999999999998876653 47999999875
Q ss_pred CCCC----CC--CCccEEEEccCCC---CchHHHHHhcCCCcEEEEE
Q 028002 136 KGWP----EF--APYDAIHVGAAAP---EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 136 ~~~~----~~--~~~D~V~~~~~~~---~~~~~~~~~Lk~gG~lv~~ 173 (215)
+..+ .. ++||+|+++.... .+++.+.++|+|||++++.
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 4221 11 6799999987643 3457888999999999985
No 152
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.53 E-value=8.4e-14 Score=105.74 Aligned_cols=102 Identities=22% Similarity=0.236 Sum_probs=81.2
Q ss_pred HHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC
Q 028002 60 QLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP 139 (215)
Q Consensus 60 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 139 (215)
+.+.....++.+|||+|||+|..+..+ +. .+++++|+++.+++.+++++ .++.++.+|......
T Consensus 28 ~~l~~~~~~~~~vLdiG~G~G~~~~~l----~~-~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~ 91 (211)
T 2gs9_A 28 RALKGLLPPGESLLEVGAGTGYWLRRL----PY-PQKVGVEPSEAMLAVGRRRA-----------PEATWVRAWGEALPF 91 (211)
T ss_dssp HHHHTTCCCCSEEEEETCTTCHHHHHC----CC-SEEEEECCCHHHHHHHHHHC-----------TTSEEECCCTTSCCS
T ss_pred HHHHHhcCCCCeEEEECCCCCHhHHhC----CC-CeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcccccCCC
Confidence 334333457889999999999988776 21 38999999999999998764 367889999877554
Q ss_pred CCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeCCC
Q 028002 140 EFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 140 ~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
..++||+|++...++++ ++++.++|||||.+++..++.
T Consensus 92 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 92 PGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 55789999999888765 357889999999999987664
No 153
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.53 E-value=8.1e-15 Score=123.58 Aligned_cols=104 Identities=23% Similarity=0.240 Sum_probs=85.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~ 144 (215)
..++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++...+. . +.++.+|+..... ..+.|
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~------~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA------P-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC------C-CEEECSCHHHHHHHHCSCE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------e-EEEEECCHHHhhhhccccC
Confidence 77889999999999999999999876558999999999999999999988764 4 8888888765321 23689
Q ss_pred cEEEEccCC----------------------------CCchHHHHHhcCCCcEEEEEeCC
Q 028002 145 DAIHVGAAA----------------------------PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 145 D~V~~~~~~----------------------------~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+|+++.++ ..+++.+.++|||||+|++++++
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 999988765 12345677899999999998765
No 154
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.52 E-value=2.8e-15 Score=123.71 Aligned_cols=135 Identities=12% Similarity=0.029 Sum_probs=105.5
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC---CCC----
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW---PEF---- 141 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~~~---- 141 (215)
+.+|||+|||+|.++..+++.. .+|+++|+++.+++.|++++..++. .+++++.+|+.+.. ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~------~~v~~~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHI------DNVQIIRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTC------CSEEEECCCSHHHHHHHSSCCCCT
T ss_pred CCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCC------CceEEEECCHHHHHHHHhhccccc
Confidence 5789999999999999998753 6899999999999999999987664 58999999986532 111
Q ss_pred ---------CCccEEEEccCCCCchHHHHHhcCCCcEEEEEeCCCceeEEEEEEcCCCceEEEeeceEEEeecccCcccc
Q 028002 142 ---------APYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNIFQDLKVVDKNQDGSLSIWSETSVRYVPLTSRDAQL 212 (215)
Q Consensus 142 ---------~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 212 (215)
..||+|+++++...+.+.+.+.|+++|.+++..++.......+..... .|.......+.+.|.|++.+.+
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~~~g~ivyvsc~p~t~ard~~~l~~-~y~~~~~~~~D~FP~T~HvE~v 363 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQ-THKVERLALFDQFPYTHHMQCG 363 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHH-HEEEEEEEEECCSTTSSCCEEE
T ss_pred cccccccccCCCCEEEECcCccccHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhh-CcEEEEEEeeccCCCCCcEEEE
Confidence 279999999988778888899999999998887764322221111112 4788888888899999998865
Q ss_pred C
Q 028002 213 R 213 (215)
Q Consensus 213 ~ 213 (215)
.
T Consensus 364 ~ 364 (369)
T 3bt7_A 364 V 364 (369)
T ss_dssp E
T ss_pred E
Confidence 4
No 155
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.52 E-value=2.8e-14 Score=104.77 Aligned_cols=100 Identities=14% Similarity=0.066 Sum_probs=82.5
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC
Q 028002 57 TCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK 136 (215)
Q Consensus 57 ~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~ 136 (215)
.+++.+. ..++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++ . .++.+..+| .
T Consensus 8 ~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~------~~v~~~~~d--~ 69 (170)
T 3i9f_A 8 EYLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----F------DSVITLSDP--K 69 (170)
T ss_dssp TTHHHHH--SSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----C------TTSEEESSG--G
T ss_pred HHHHhcC--cCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----C------CCcEEEeCC--C
Confidence 3455555 7778899999999999999999875 5999999999999999876 1 578999988 2
Q ss_pred CCCCCCCccEEEEccCCCCc------hHHHHHhcCCCcEEEEEeC
Q 028002 137 GWPEFAPYDAIHVGAAAPEI------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~ 175 (215)
. ...++||+|++...++++ ++++.+.|||||++++...
T Consensus 70 ~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 70 E-IPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp G-SCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-CCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 2 233789999999988765 4788999999999999753
No 156
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.52 E-value=7.9e-14 Score=106.51 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=83.6
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
...++.+. ..++.+|||+|||+|..+..+++. .+..+|+++|+|+.+++.+.++....... ....++.++++|+.
T Consensus 17 ~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~gvD~s~~~l~~~~~~a~~~~~~--~~~~~v~~~~~d~~ 91 (218)
T 3mq2_A 17 DAEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQ-NPSRLVVALDADKSRMEKISAKAAAKPAK--GGLPNLLYLWATAE 91 (218)
T ss_dssp HHHHHHHH--TTSSEEEEEESCTTCHHHHHHHHH-CTTEEEEEEESCGGGGHHHHHHHTSCGGG--TCCTTEEEEECCST
T ss_pred HHHHHHhh--ccCCCEEEEecCCCCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhhhh--cCCCceEEEecchh
Confidence 44556665 778899999999999999999998 45589999999999888654443321111 12258999999998
Q ss_pred CCCCCCCCccEEEEccCC-----------CCchHHHHHhcCCCcEEEEEeC
Q 028002 136 KGWPEFAPYDAIHVGAAA-----------PEIPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~-----------~~~~~~~~~~Lk~gG~lv~~~~ 175 (215)
......+. |.|+..... ..+++++.++|||||.++++++
T Consensus 92 ~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 92 RLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp TCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 75444344 777644321 4566789999999999999754
No 157
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.52 E-value=1.2e-13 Score=116.81 Aligned_cols=106 Identities=20% Similarity=0.250 Sum_probs=87.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC--CCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--EFAP 143 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~ 143 (215)
..++.+|||+|||+|..+..++..++..++++++|+++.+++.+++++...+. .++.++.+|+..... ..+.
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------KIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCTTCCSSSSCSSC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------CcEEEEEcChhhcchhhccCC
Confidence 77889999999999999999999875447999999999999999999987664 579999999876542 2267
Q ss_pred ccEEEEccCCC----------------------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 144 YDAIHVGAAAP----------------------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 144 ~D~V~~~~~~~----------------------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
||+|+++.++. .+++.+.++|||||.|++++++.
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99999876541 23566788999999999987653
No 158
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.52 E-value=6.4e-14 Score=114.31 Aligned_cols=98 Identities=19% Similarity=0.233 Sum_probs=79.7
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|.++..+++. +. .+|+++|+++ +++.|++++..++.. ++++++.+|+.+...+.++||
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~-~~v~gvD~s~-~~~~a~~~~~~~~~~-----~~i~~~~~d~~~~~~~~~~~D 133 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GA-KKVLGVDQSE-ILYQAMDIIRLNKLE-----DTITLIKGKIEEVHLPVEKVD 133 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEEESST-HHHHHHHHHHHTTCT-----TTEEEEESCTTTSCCSCSCEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CC-CEEEEEChHH-HHHHHHHHHHHcCCC-----CcEEEEEeeHHHhcCCCCcEE
Confidence 567889999999999999999987 43 6899999996 999999998876653 589999999987644447899
Q ss_pred EEEEccC---CC------CchHHHHHhcCCCcEEE
Q 028002 146 AIHVGAA---AP------EIPQALIDQLKPGGRMV 171 (215)
Q Consensus 146 ~V~~~~~---~~------~~~~~~~~~Lk~gG~lv 171 (215)
+|++... +. .++.++.++|||||.++
T Consensus 134 ~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 134 VIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 9998762 21 13456679999999987
No 159
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.51 E-value=5.1e-14 Score=115.02 Aligned_cols=111 Identities=19% Similarity=0.231 Sum_probs=88.5
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+. ..++.+|||+|||+|.++..+++. ++..+++++|+|+.+++.+++++...+. ...+..+|.
T Consensus 185 ~~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~-~~~~~v~~vD~s~~~l~~a~~~~~~~~~-------~~~~~~~d~ 254 (343)
T 2pjd_A 185 SQLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARH-SPKIRLTLCDVSAPAVEASRATLAANGV-------EGEVFASNV 254 (343)
T ss_dssp HHHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHH-CTTCBCEEEESBHHHHHHHHHHHHHTTC-------CCEEEECST
T ss_pred HHHHHHhcC--cCCCCeEEEecCccCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhCC-------CCEEEEccc
Confidence 345555553 345679999999999999999988 4657999999999999999999877553 356788888
Q ss_pred CCCCCCCCCccEEEEccCCCC-----------chHHHHHhcCCCcEEEEEeCCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAPE-----------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~~-----------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
.... .++||+|+++.+++. +++++.++|||||.+++..+..
T Consensus 255 ~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 255 FSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp TTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred cccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 7643 378999999998864 3456789999999999987654
No 160
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=4.6e-14 Score=109.68 Aligned_cols=104 Identities=19% Similarity=0.196 Sum_probs=81.9
Q ss_pred HHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC
Q 028002 59 LQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW 138 (215)
Q Consensus 59 l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 138 (215)
+..+..++.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++++.. .+++++++|+.+..
T Consensus 47 ~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~ 114 (245)
T 3ggd_A 47 LPRFELLFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKENTA---------ANISYRLLDGLVPE 114 (245)
T ss_dssp HHHHTTTSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHSCC---------TTEEEEECCTTCHH
T ss_pred HHHHhhccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhCcc---------cCceEEECcccccc
Confidence 34443356788999999999999999999985 4899999999999999887521 58999999987632
Q ss_pred CC-----CCCccEEEEccCCCCch--------HHHHHhcCCCcEEEEEe
Q 028002 139 PE-----FAPYDAIHVGAAAPEIP--------QALIDQLKPGGRMVIPV 174 (215)
Q Consensus 139 ~~-----~~~~D~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~ 174 (215)
.. ...||+|++...++++. +++.++|||||++++..
T Consensus 115 ~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 115 QAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp HHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 21 12499999998876544 56889999999977754
No 161
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.51 E-value=5.7e-14 Score=114.18 Aligned_cols=113 Identities=14% Similarity=0.081 Sum_probs=85.5
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+.+.+.. ..++.+|||+|||+|.++..+++. + .+|+++|+|+.+++.+++++..++.. ..+++++++|+.
T Consensus 142 ~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~-g--a~V~~VD~s~~al~~a~~n~~~~gl~----~~~v~~i~~D~~ 213 (332)
T 2igt_A 142 EWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAA-G--AEVTHVDASKKAIGWAKENQVLAGLE----QAPIRWICEDAM 213 (332)
T ss_dssp HHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHT-T--CEEEEECSCHHHHHHHHHHHHHHTCT----TSCEEEECSCHH
T ss_pred HHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECcHH
Confidence 344444431 346789999999999999999986 3 48999999999999999999887653 114899999987
Q ss_pred CCCCC----CCCccEEEEccCC----------------CCchHHHHHhcCCCcEEEEEeCC
Q 028002 136 KGWPE----FAPYDAIHVGAAA----------------PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 136 ~~~~~----~~~~D~V~~~~~~----------------~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+.... .++||+|+++++. ..+++.+.++|+|||.+++.+..
T Consensus 214 ~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 214 KFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 64321 3689999998763 12445678999999997776543
No 162
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.51 E-value=8.8e-14 Score=109.99 Aligned_cols=100 Identities=22% Similarity=0.212 Sum_probs=86.7
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
..+++.+|||+|||+|.+++.+++. |. .+|+++|+++.+++.+++|+..+++. +++++..+|..+.... +.|
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~-g~-~~V~avD~np~a~~~~~~N~~~N~v~-----~~v~~~~~D~~~~~~~-~~~ 193 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVY-GK-AKVIAIEKDPYTFKFLVENIHLNKVE-----DRMSAYNMDNRDFPGE-NIA 193 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHH-TC-CEEEEECCCHHHHHHHHHHHHHTTCT-----TTEEEECSCTTTCCCC-SCE
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHh-cC-CeEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEeCcHHHhccc-cCC
Confidence 4788999999999999999999987 43 68999999999999999999998875 6899999999876554 789
Q ss_pred cEEEEccCC--CCchHHHHHhcCCCcEEEE
Q 028002 145 DAIHVGAAA--PEIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 145 D~V~~~~~~--~~~~~~~~~~Lk~gG~lv~ 172 (215)
|.|+++.+. ..+++.+.++||+||+|.+
T Consensus 194 D~Vi~~~p~~~~~~l~~a~~~lk~gG~ih~ 223 (278)
T 3k6r_A 194 DRILMGYVVRTHEFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp EEEEECCCSSGGGGHHHHHHHEEEEEEEEE
T ss_pred CEEEECCCCcHHHHHHHHHHHcCCCCEEEE
Confidence 999988654 3567888999999999866
No 163
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.51 E-value=4.5e-14 Score=118.32 Aligned_cols=144 Identities=16% Similarity=0.137 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC
Q 028002 53 HMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG 132 (215)
Q Consensus 53 ~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~ 132 (215)
.....+...+.. ..++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|++++..++. . ++++.+
T Consensus 276 ~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl------~-v~~~~~ 344 (425)
T 2jjq_A 276 YQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNV------D-AEFEVA 344 (425)
T ss_dssp HHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTC------C-EEEEEC
T ss_pred HHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCC------c-EEEEEC
Confidence 334444454443 5677899999999999999999863 6999999999999999999887653 4 899999
Q ss_pred CCCCCCCCCCCccEEEEccCCCCchH---HHHHhcCCCcEEEEEeCCCceeEEEEEEcCCCceEEEeeceEEEeecccCc
Q 028002 133 DGRKGWPEFAPYDAIHVGAAAPEIPQ---ALIDQLKPGGRMVIPVGNIFQDLKVVDKNQDGSLSIWSETSVRYVPLTSRD 209 (215)
Q Consensus 133 d~~~~~~~~~~~D~V~~~~~~~~~~~---~~~~~Lk~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 209 (215)
|+.+.... .||+|+++++...+.+ +....|+|+|.++++++.... .+.+.... |.......+.+.|.|++.
T Consensus 345 d~~~~~~~--~fD~Vv~dPPr~g~~~~~~~~l~~l~p~givyvsc~p~tl-arDl~~l~---y~l~~~~~~DmFP~T~Hv 418 (425)
T 2jjq_A 345 SDREVSVK--GFDTVIVDPPRAGLHPRLVKRLNREKPGVIVYVSCNPETF-ARDVKMLD---YRIDEIVALDMFPHTPHV 418 (425)
T ss_dssp CTTTCCCT--TCSEEEECCCTTCSCHHHHHHHHHHCCSEEEEEESCHHHH-HHHHHHSS---CCEEEEEEECCSTTSSCC
T ss_pred ChHHcCcc--CCCEEEEcCCccchHHHHHHHHHhcCCCcEEEEECChHHH-HhHHhhCe---EEEEEEEEECcCCCCceE
Confidence 99876543 8999999988644332 233458999999998754321 11111111 777778888999999998
Q ss_pred cccC
Q 028002 210 AQLR 213 (215)
Q Consensus 210 ~~~~ 213 (215)
+.+.
T Consensus 419 E~v~ 422 (425)
T 2jjq_A 419 ELVA 422 (425)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8664
No 164
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.51 E-value=3.9e-14 Score=110.65 Aligned_cols=106 Identities=12% Similarity=0.138 Sum_probs=77.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhh---cccCc----------cc----------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKS---AAAPL----------LK---------- 123 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~---~~~~~----------~~---------- 123 (215)
++.+|||+|||+|.++..+++.+ .+..+++|+|+|+.+++.|++++... +.... ..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 56799999999999999999872 12368999999999999999887654 32100 00
Q ss_pred CCCeE-------------EEeCCCCCCCC-----CCCCccEEEEccCCC---------------CchHHHHHhcCCCcEE
Q 028002 124 EGSLS-------------VHVGDGRKGWP-----EFAPYDAIHVGAAAP---------------EIPQALIDQLKPGGRM 170 (215)
Q Consensus 124 ~~~v~-------------~~~~d~~~~~~-----~~~~~D~V~~~~~~~---------------~~~~~~~~~Lk~gG~l 170 (215)
..+++ +.++|+.+... ...+||+|+++.++. .+++.+.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 00045 89999877542 324899999986532 3456788999999999
Q ss_pred EEE
Q 028002 171 VIP 173 (215)
Q Consensus 171 v~~ 173 (215)
++.
T Consensus 211 ~~~ 213 (250)
T 1o9g_A 211 AVT 213 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 994
No 165
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.50 E-value=1e-13 Score=113.46 Aligned_cols=109 Identities=20% Similarity=0.168 Sum_probs=84.1
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+. ..++.+|||+|||+|.++..+++. +. .+|+++|+++ +++.+++++...+.. ++++++.+|+.
T Consensus 40 ~~i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~~vD~s~-~~~~a~~~~~~~~l~-----~~v~~~~~d~~ 109 (348)
T 2y1w_A 40 RAILQNHT--DFKDKIVLDVGCGSGILSFFAAQA-GA-RKIYAVEAST-MAQHAEVLVKSNNLT-----DRIVVIPGKVE 109 (348)
T ss_dssp HHHHHTGG--GTTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEEECST-HHHHHHHHHHHTTCT-----TTEEEEESCTT
T ss_pred HHHHhccc--cCCcCEEEEcCCCccHHHHHHHhC-CC-CEEEEECCHH-HHHHHHHHHHHcCCC-----CcEEEEEcchh
Confidence 34444443 567899999999999999999886 33 6999999996 889999988876653 58999999988
Q ss_pred CCCCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEeC
Q 028002 136 KGWPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+.... ++||+|++.....++ +..+.++|||||.+++..+
T Consensus 110 ~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (348)
T 2y1w_A 110 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIG 156 (348)
T ss_dssp TCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEE
T ss_pred hCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecC
Confidence 75444 689999998764332 2345789999999986543
No 166
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.50 E-value=2.9e-14 Score=120.00 Aligned_cols=106 Identities=25% Similarity=0.252 Sum_probs=87.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~ 144 (215)
..++.+|||+|||+|..+..++..++..++|+++|+++.+++.+++++...+. .++.++.+|...... ..+.|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~------~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV------SNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC------SSEEEECCCHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEeCCHHHhhhhccccC
Confidence 77889999999999999999999876668999999999999999999988775 478999988765321 12689
Q ss_pred cEEEEccCCC----------------------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 145 DAIHVGAAAP----------------------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 145 D~V~~~~~~~----------------------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|+|+++.++. .+++.+.++|||||.|++++++.
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 9999988741 23456788999999999988753
No 167
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.50 E-value=1.8e-13 Score=102.07 Aligned_cols=98 Identities=22% Similarity=0.232 Sum_probs=79.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
+.++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++ .++.++.+|+.......++||
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~~D~~~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~D 109 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-G--HDVLGTDLDPILIDYAKQDF-----------PEARWVVGDLSVDQISETDFD 109 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHC-----------TTSEEEECCTTTSCCCCCCEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-C--CcEEEEcCCHHHHHHHHHhC-----------CCCcEEEcccccCCCCCCcee
Confidence 567889999999999999999987 3 68999999999999998764 357889999877544447899
Q ss_pred EEEEcc-CCCC--------chHHHHHhcCCCcEEEEEeCCC
Q 028002 146 AIHVGA-AAPE--------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 146 ~V~~~~-~~~~--------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+|++.. .+++ +++.+.++|+|||.+++..++.
T Consensus 110 ~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 110 LIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 999983 4433 3457889999999999977653
No 168
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.50 E-value=6.4e-14 Score=107.14 Aligned_cols=106 Identities=29% Similarity=0.312 Sum_probs=82.1
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...++..+. ..++.+|||+|||+|..+..+++. + .+++++|+++.+++.++++ .++.+..++.
T Consensus 41 ~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~------------~~~~~~~~~~ 103 (227)
T 3e8s_A 41 DQAILLAIL--GRQPERVLDLGCGEGWLLRALADR-G--IEAVGVDGDRTLVDAARAA------------GAGEVHLASY 103 (227)
T ss_dssp HHHHHHHHH--HTCCSEEEEETCTTCHHHHHHHTT-T--CEEEEEESCHHHHHHHHHT------------CSSCEEECCH
T ss_pred cHHHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC-C--CEEEEEcCCHHHHHHHHHh------------cccccchhhH
Confidence 345566665 456689999999999999999887 3 6899999999999999875 2456667665
Q ss_pred CCC---C-CCCCCccEEEEccCCC-----CchHHHHHhcCCCcEEEEEeCCC
Q 028002 135 RKG---W-PEFAPYDAIHVGAAAP-----EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 135 ~~~---~-~~~~~~D~V~~~~~~~-----~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
... . ...++||+|++...++ .+++++.++|+|||++++..++.
T Consensus 104 ~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 104 AQLAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp HHHHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HhhcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 543 2 2335699999988775 35578899999999999987653
No 169
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.49 E-value=1.5e-13 Score=101.17 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=78.6
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
...+++.+.....++.+|||+|||+|.++..+++. + +++++|+|+.+++. . .+++++++|+
T Consensus 10 ~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~-~---~v~gvD~s~~~~~~------~---------~~~~~~~~d~ 70 (170)
T 3q87_B 10 TYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKR-N---TVVSTDLNIRALES------H---------RGGNLVRADL 70 (170)
T ss_dssp HHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTT-S---EEEEEESCHHHHHT------C---------SSSCEEECST
T ss_pred HHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhc-C---cEEEEECCHHHHhc------c---------cCCeEEECCh
Confidence 44455555422256789999999999999999876 2 89999999999887 1 5789999999
Q ss_pred CCCCCCCCCccEEEEccCCC---------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAP---------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~---------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
...... ++||+|+++.++. .+...+.+.| |||.+++....
T Consensus 71 ~~~~~~-~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 71 LCSINQ-ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp TTTBCG-GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred hhhccc-CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 875444 7899999998765 2346777778 99999997643
No 170
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.49 E-value=1e-13 Score=108.77 Aligned_cols=97 Identities=20% Similarity=0.173 Sum_probs=77.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++. + .+++++|+|+.+++.++++.. .+ +..+|+.......++||
T Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~s~~~l~~a~~~~~----------~~--~~~~d~~~~~~~~~~fD 116 (260)
T 2avn_A 52 LKNPCRVLDLGGGTGKWSLFLQER-G--FEVVLVDPSKEMLEVAREKGV----------KN--VVEAKAEDLPFPSGAFE 116 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHHTT-T--CEEEEEESCHHHHHHHHHHTC----------SC--EEECCTTSCCSCTTCEE
T ss_pred cCCCCeEEEeCCCcCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHhhcC----------CC--EEECcHHHCCCCCCCEE
Confidence 457889999999999999999887 3 689999999999999987642 12 77888876554447899
Q ss_pred EEEEccCCCC-------chHHHHHhcCCCcEEEEEeCCC
Q 028002 146 AIHVGAAAPE-------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 146 ~V~~~~~~~~-------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
+|++...+.+ +++++.++|||||.+++.+++.
T Consensus 117 ~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 117 AVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 9998765432 3467889999999999987663
No 171
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.49 E-value=1.9e-13 Score=111.94 Aligned_cols=99 Identities=20% Similarity=0.201 Sum_probs=80.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|.++..+++. +. .+|+|+|++ .+++.|++++...+.. ++++++.+|+.+...+.++||
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~-~~v~gvD~s-~~l~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~fD 135 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GA-RKVIGIECS-SISDYAVKIVKANKLD-----HVVTIIKGKVEEVELPVEKVD 135 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TC-SEEEEEECS-THHHHHHHHHHHTTCT-----TTEEEEESCTTTCCCSSSCEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CC-CEEEEECcH-HHHHHHHHHHHHcCCC-----CcEEEEECcHHHccCCCCceE
Confidence 456789999999999999999987 33 699999999 4999999999887654 569999999987655457999
Q ss_pred EEEEccCCC---------CchHHHHHhcCCCcEEEE
Q 028002 146 AIHVGAAAP---------EIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 146 ~V~~~~~~~---------~~~~~~~~~Lk~gG~lv~ 172 (215)
+|++..... .++..+.++|||||+++.
T Consensus 136 ~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 136 IIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 999865321 233566799999999974
No 172
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.48 E-value=4.4e-13 Score=108.86 Aligned_cols=99 Identities=21% Similarity=0.217 Sum_probs=79.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|.++..+++. +. .+|+++|++ .+++.|++++..++.. ++++++.+|+.+...+.++||
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~-~~v~~vD~s-~~~~~a~~~~~~~~~~-----~~i~~~~~d~~~~~~~~~~~D 107 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GA-KHVIGVDMS-SIIEMAKELVELNGFS-----DKITLLRGKLEDVHLPFPKVD 107 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CC-SEEEEEESS-THHHHHHHHHHHTTCT-----TTEEEEESCTTTSCCSSSCEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CC-CEEEEEChH-HHHHHHHHHHHHcCCC-----CCEEEEECchhhccCCCCccc
Confidence 556789999999999999999886 43 689999999 5899999998877654 579999999887644447899
Q ss_pred EEEEccCCC---------CchHHHHHhcCCCcEEEE
Q 028002 146 AIHVGAAAP---------EIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 146 ~V~~~~~~~---------~~~~~~~~~Lk~gG~lv~ 172 (215)
+|++..... .++.++.++|+|||.++.
T Consensus 108 ~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 108 IIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 999875321 133456789999999973
No 173
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.48 E-value=1.7e-13 Score=113.25 Aligned_cols=99 Identities=21% Similarity=0.152 Sum_probs=81.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|.++..+++. +. .+|+++|++ .+++.|++++..++.. ++++++.+|+.+.... ++||
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g~-~~V~gvD~s-~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~-~~~D 131 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-GA-RKVYAVEAT-KMADHARALVKANNLD-----HIVEVIEGSVEDISLP-EKVD 131 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-TC-SEEEEEESS-TTHHHHHHHHHHTTCT-----TTEEEEESCGGGCCCS-SCEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-CC-CEEEEEccH-HHHHHHHHHHHHcCCC-----CeEEEEECchhhcCcC-Ccce
Confidence 567899999999999999999987 43 599999999 9999999999887764 5799999999876555 7899
Q ss_pred EEEEccCCCC---------chHHHHHhcCCCcEEEEE
Q 028002 146 AIHVGAAAPE---------IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 146 ~V~~~~~~~~---------~~~~~~~~Lk~gG~lv~~ 173 (215)
+|++...... ++..+.++|||||++++.
T Consensus 132 ~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 132 VIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 9999653221 345667999999999774
No 174
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.48 E-value=1.1e-13 Score=110.69 Aligned_cols=107 Identities=21% Similarity=0.203 Sum_probs=81.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
.+..+|||+|||+|..+..+++.. +..+|+++|+|+.+++.|++++...... .+..++++++.+|+..... ..++||
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAG-SYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSS-CTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccc-cccCCceEEEEChHHHHHhhcCCCcc
Confidence 446899999999999999999873 4478999999999999999988654210 0122589999999877543 236899
Q ss_pred EEEEccCCC----------CchHHHHHhcCCCcEEEEEeC
Q 028002 146 AIHVGAAAP----------EIPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 146 ~V~~~~~~~----------~~~~~~~~~Lk~gG~lv~~~~ 175 (215)
+|+++...+ .+.+.+.+.|+|||++++...
T Consensus 160 vIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEEECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 999976542 355688999999999999753
No 175
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.47 E-value=2.3e-12 Score=106.36 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=83.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC--CCCc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE--FAPY 144 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~ 144 (215)
.++.+|||+| |+|.++..+++. ++..+++++|+++.+++.|++++...+. .+++++.+|+...++. .++|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~l~~~~~~~f 242 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGY------EDIEIFTFDLRKPLPDYALHKF 242 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTC------CCEEEECCCTTSCCCTTTSSCB
T ss_pred CCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC------CCEEEEEChhhhhchhhccCCc
Confidence 3578999999 999999999887 5657999999999999999999987664 3799999999874332 3589
Q ss_pred cEEEEccCCC-----CchHHHHHhcCCCc-EEEEEeCC
Q 028002 145 DAIHVGAAAP-----EIPQALIDQLKPGG-RMVIPVGN 176 (215)
Q Consensus 145 D~V~~~~~~~-----~~~~~~~~~Lk~gG-~lv~~~~~ 176 (215)
|+|+++.++. .+++.+.+.|+||| .+++++..
T Consensus 243 D~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 243 DTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp SEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred cEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 9999998764 34578899999999 44666654
No 176
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.47 E-value=3.5e-14 Score=111.80 Aligned_cols=105 Identities=22% Similarity=0.142 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCccc----------------------
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLK---------------------- 123 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~---------------------- 123 (215)
..++.+|||+|||+|.++..++.. +. .+|+|+|+|+.+++.|++++...... +.
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~-~~-~~v~g~D~s~~~l~~a~~~~~~~~~~--~d~s~~~~~~~~~~~~~~~~~~~~ 128 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACD-SF-QDITLSDFTDRNREELEKWLKKEPGA--YDWTPAVKFACELEGNSGRWEEKE 128 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGG-TE-EEEEEEESCHHHHHHHHHHHHTCTTC--CCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHh-hh-cceeeccccHHHHHHHHHHHhcCCCc--ccchHHHHHHHhcCCCCcchhhHH
Confidence 456789999999999887766654 32 47999999999999999876542100 00
Q ss_pred ---CCCeE-EEeCCCCCCCC----CCCCccEEEEccCCCCc----------hHHHHHhcCCCcEEEEEe
Q 028002 124 ---EGSLS-VHVGDGRKGWP----EFAPYDAIHVGAAAPEI----------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 124 ---~~~v~-~~~~d~~~~~~----~~~~~D~V~~~~~~~~~----------~~~~~~~Lk~gG~lv~~~ 174 (215)
..++. +.++|+....+ ..++||+|++...++++ ++++.++|||||.|+++.
T Consensus 129 ~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 129 EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 01343 88899876422 23689999999876543 356789999999999985
No 177
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.46 E-value=9e-14 Score=107.06 Aligned_cols=101 Identities=16% Similarity=0.108 Sum_probs=75.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecC-hHHHHHH---HHHHHhhcccCcccCCCeEEEeCCCCCCCCC-
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHI-PELVVSS---IQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE- 140 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s-~~~~~~a---~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 140 (215)
..++.+|||+|||+|..+..+++. .+..+|+|+|+| +.+++.| ++++...+. .++.+..+|+......
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------~~v~~~~~d~~~l~~~~ 94 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGL------SNVVFVIAAAESLPFEL 94 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC------SSEEEECCBTTBCCGGG
T ss_pred CCCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC------CCeEEEEcCHHHhhhhc
Confidence 567889999999999999999876 355899999999 6676666 655544433 5799999998775321
Q ss_pred CCCccEEEEccCCC-----------CchHHHHHhcCCCcEEEEE
Q 028002 141 FAPYDAIHVGAAAP-----------EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 141 ~~~~D~V~~~~~~~-----------~~~~~~~~~Lk~gG~lv~~ 173 (215)
.+.+|.|+++.+.. .++.++.++|||||.+++.
T Consensus 95 ~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 95 KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 14566666654332 2457889999999999993
No 178
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.46 E-value=2e-13 Score=106.79 Aligned_cols=81 Identities=14% Similarity=0.046 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC----CCC--C
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG----WPE--F 141 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~--~ 141 (215)
++.+|||+|||+|.++..+++.. +..+++++|+++.+++.|++++...+.. .+++++++|+.+. ... .
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~~ 138 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLS-----DLIKVVKVPQKTLLMDALKEESE 138 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEECCTTCSSTTTSTTCCS
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCC-----ccEEEEEcchhhhhhhhhhcccC
Confidence 56799999999999999998875 3379999999999999999999876653 4699999997542 221 2
Q ss_pred CCccEEEEccCCC
Q 028002 142 APYDAIHVGAAAP 154 (215)
Q Consensus 142 ~~~D~V~~~~~~~ 154 (215)
++||+|++++++.
T Consensus 139 ~~fD~i~~npp~~ 151 (254)
T 2h00_A 139 IIYDFCMCNPPFF 151 (254)
T ss_dssp CCBSEEEECCCCC
T ss_pred CcccEEEECCCCc
Confidence 5899999996653
No 179
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.46 E-value=3.4e-13 Score=110.88 Aligned_cols=98 Identities=23% Similarity=0.225 Sum_probs=77.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|.+++.+++. |. .+|+++|.|+ +++.|++.+..++.. ++++++.++..+...+ ++||
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~a-GA-~~V~ave~s~-~~~~a~~~~~~n~~~-----~~i~~i~~~~~~~~lp-e~~D 151 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQA-GA-RRVYAVEASA-IWQQAREVVRFNGLE-----DRVHVLPGPVETVELP-EQVD 151 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEEECST-THHHHHHHHHHTTCT-----TTEEEEESCTTTCCCS-SCEE
T ss_pred hcCCCEEEEeCCCccHHHHHHHHh-CC-CEEEEEeChH-HHHHHHHHHHHcCCC-----ceEEEEeeeeeeecCC-cccc
Confidence 346889999999999999988877 54 6899999986 789999999888875 7899999999876554 7899
Q ss_pred EEEEccCC-----CC----chHHHHHhcCCCcEEEE
Q 028002 146 AIHVGAAA-----PE----IPQALIDQLKPGGRMVI 172 (215)
Q Consensus 146 ~V~~~~~~-----~~----~~~~~~~~Lk~gG~lv~ 172 (215)
+|++.... +. +.....++|+|||.++-
T Consensus 152 vivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 152 AIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp EEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred EEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 99874321 22 23455689999998864
No 180
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.45 E-value=1.7e-12 Score=106.99 Aligned_cols=100 Identities=20% Similarity=0.250 Sum_probs=83.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.. ++++++.+|+....+ ..||
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~-----~~v~~~~~d~~~~~p--~~~D 270 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLA-----DRCEILPGDFFETIP--DGAD 270 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT-----TTEEEEECCTTTCCC--SSCS
T ss_pred CccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcC-----CceEEeccCCCCCCC--CCce
Confidence 4567899999999999999999985 6679999999 99999999998876543 689999999985443 3799
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
+|++...++++ ++++.+.|+|||+|++..
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999887643 456789999999999853
No 181
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.45 E-value=1.7e-12 Score=106.82 Aligned_cols=100 Identities=12% Similarity=0.062 Sum_probs=83.1
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC--CCCCCc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW--PEFAPY 144 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~ 144 (215)
....+|||+|||+|..+..+++.. |..+++++|+ +.+++.+++++...+.. ++++++.+|+.+.. .+ ++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~~p-~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGS-----ERIHGHGANLLDRDVPFP-TGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTG-----GGEEEEECCCCSSSCCCC-CCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcc-----cceEEEEccccccCCCCC-CCc
Confidence 456899999999999999999985 6689999999 99999999988765543 58999999998752 23 689
Q ss_pred cEEEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 145 DAIHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 145 D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
|+|++...++++ ++++.+.|+|||+|++..
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999999888754 356789999999998854
No 182
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.45 E-value=4e-13 Score=112.91 Aligned_cols=112 Identities=25% Similarity=0.371 Sum_probs=88.2
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+...+. ..++.+|||+|||+|..+..+++.+ ++++++++|+++.+++.+++++...+. ++.++.+|..
T Consensus 236 ~~~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g~-------~~~~~~~D~~ 305 (429)
T 1sqg_A 236 QGCMTWLA--PQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGM-------KATVKQGDGR 305 (429)
T ss_dssp HTHHHHHC--CCTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTTC-------CCEEEECCTT
T ss_pred HHHHHHcC--CCCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcCC-------CeEEEeCchh
Confidence 34444454 7788999999999999999999985 447999999999999999999887653 4688899987
Q ss_pred CCC--CCCCCccEEEEccCCC----------------------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 136 KGW--PEFAPYDAIHVGAAAP----------------------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 136 ~~~--~~~~~~D~V~~~~~~~----------------------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
... ...+.||+|+++.++. .+++.+.++|||||+|++++++.
T Consensus 306 ~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred hchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 653 2236899999877642 23456778999999999987653
No 183
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.45 E-value=2.3e-13 Score=112.84 Aligned_cols=102 Identities=16% Similarity=0.180 Sum_probs=80.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC-CCCc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE-FAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~ 144 (215)
.+++.+|||+|||+|..+..+++. | .+|+++|+|+.+++.+++++..++.. ..+.++|+.+.+.. .+.|
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~-g--a~V~avDis~~al~~a~~n~~~ng~~-------~~~~~~D~~~~l~~~~~~f 281 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARK-G--AYALAVDKDLEALGVLDQAALRLGLR-------VDIRHGEALPTLRGLEGPF 281 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHTCC-------CEEEESCHHHHHHTCCCCE
T ss_pred hcCCCeEEEcccchhHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHhCCC-------CcEEEccHHHHHHHhcCCC
Confidence 556899999999999999999986 4 45999999999999999999887652 24668887653211 2349
Q ss_pred cEEEEccCC---------------CCchHHHHHhcCCCcEEEEEeCCC
Q 028002 145 DAIHVGAAA---------------PEIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 145 D~V~~~~~~---------------~~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|+|+++++. ..+...+.++|+|||.|++.+++.
T Consensus 282 D~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 282 HHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp EEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 999999875 234566789999999999766553
No 184
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.45 E-value=1.3e-12 Score=105.96 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=87.8
Q ss_pred HHHHHHHHhcC--CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 56 ATCLQLLEENL--KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 56 ~~~l~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
..+++.+. . .++.+|||+|||+|..+..+++.. +..+++++|++ .+++.+++++...+.. ++++++.+|
T Consensus 153 ~~~~~~~~--~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~-----~~v~~~~~d 223 (335)
T 2r3s_A 153 QLIAQLVN--ENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVA-----SRYHTIAGS 223 (335)
T ss_dssp HHHHHHHT--C--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCG-----GGEEEEESC
T ss_pred HHHHHhcc--cccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCC-----cceEEEecc
Confidence 34455554 4 677899999999999999999985 55799999999 9999999998776543 479999999
Q ss_pred CCCCCCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEeC
Q 028002 134 GRKGWPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+.+.... +.||+|++...++++ ++++.+.|+|||++++...
T Consensus 224 ~~~~~~~-~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 224 AFEVDYG-NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp TTTSCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCCCC-CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 8764333 459999998877654 3567899999999888643
No 185
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.45 E-value=2.1e-13 Score=109.57 Aligned_cols=107 Identities=21% Similarity=0.185 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC--CCCCc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--EFAPY 144 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~ 144 (215)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...... ....+++++.+|+..... ..++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRS--LADPRATVRVGDGLAFVRQTPDNTY 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG--GGCTTEEEEESCHHHHHHSSCTTCE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcc--cCCCcEEEEECcHHHHHHhccCCce
Confidence 456899999999999999999763 4479999999999999999987432111 223689999999875432 23789
Q ss_pred cEEEEccCCC----------CchHHHHHhcCCCcEEEEEeCC
Q 028002 145 DAIHVGAAAP----------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 145 D~V~~~~~~~----------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+|+++...+ .+++.+.++|+|||++++...+
T Consensus 171 DvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 171 DVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 9999977542 3456889999999999997665
No 186
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.45 E-value=7.1e-13 Score=109.45 Aligned_cols=116 Identities=16% Similarity=0.116 Sum_probs=87.7
Q ss_pred chhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEE
Q 028002 50 SAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSV 129 (215)
Q Consensus 50 ~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~ 129 (215)
..+.+...++... ..++.+|||+|||+|.++..++... ..++++|+|+|+.+++.|++++...+.. +++++
T Consensus 202 l~~~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~-----~~i~~ 272 (373)
T 3tm4_A 202 LKASIANAMIELA---ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVL-----DKIKF 272 (373)
T ss_dssp CCHHHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCG-----GGCEE
T ss_pred ccHHHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCC-----CceEE
Confidence 3444455555443 5678899999999999999999874 4458999999999999999999887654 58899
Q ss_pred EeCCCCCCCCCCCCccEEEEccCCCC--------------chHHHHHhcCCCcEEEEEeCC
Q 028002 130 HVGDGRKGWPEFAPYDAIHVGAAAPE--------------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 130 ~~~d~~~~~~~~~~~D~V~~~~~~~~--------------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.++|+.+.....++||+|++++++.. +.+.+.++| +|.+++.+++
T Consensus 273 ~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~ 331 (373)
T 3tm4_A 273 IQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE 331 (373)
T ss_dssp EECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC
T ss_pred EECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC
Confidence 99999876554478999999987531 224566667 5666655554
No 187
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.45 E-value=5.3e-13 Score=100.50 Aligned_cols=102 Identities=18% Similarity=0.106 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCC-CCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 57 TCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGP-QGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 57 ~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
.+.+.+. .+.++.+|||+|||+|..+..+++.+++ ..+|+++|+++.. . ..++.++++|+.
T Consensus 12 ~~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~------~~~v~~~~~d~~ 73 (201)
T 2plw_A 12 ELDNKYL-FLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P------IPNVYFIQGEIG 73 (201)
T ss_dssp HHHHHHC-CCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C------CTTCEEEECCTT
T ss_pred HHHHHcC-CCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C------CCCceEEEcccc
Confidence 3444443 3577889999999999999999998642 4799999999831 0 147889999987
Q ss_pred CCC-------------------------CCCCCccEEEEccCCCC-----------------chHHHHHhcCCCcEEEEE
Q 028002 136 KGW-------------------------PEFAPYDAIHVGAAAPE-----------------IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 136 ~~~-------------------------~~~~~~D~V~~~~~~~~-----------------~~~~~~~~Lk~gG~lv~~ 173 (215)
... ...++||+|+++...+. +++.+.++|||||.+++.
T Consensus 74 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 74 KDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp TTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 654 23368999999876543 345678999999999996
Q ss_pred eCC
Q 028002 174 VGN 176 (215)
Q Consensus 174 ~~~ 176 (215)
+..
T Consensus 154 ~~~ 156 (201)
T 2plw_A 154 MYL 156 (201)
T ss_dssp EEC
T ss_pred EeC
Confidence 543
No 188
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.45 E-value=1.6e-13 Score=115.43 Aligned_cols=148 Identities=19% Similarity=0.211 Sum_probs=107.2
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
+...+++.+. ..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++..++. .+++++.+|
T Consensus 274 l~~~~~~~l~--~~~~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~------~~v~f~~~d 342 (433)
T 1uwv_A 274 MVARALEWLD--VQPEDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGL------QNVTFYHEN 342 (433)
T ss_dssp HHHHHHHHHT--CCTTCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECC
T ss_pred HHHHHHHhhc--CCCCCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEECC
Confidence 3444455544 5677899999999999999999873 7999999999999999999987654 489999999
Q ss_pred CCCCCC----CCCCccEEEEccCCCCchHHH--HHhcCCCcEEEEEeCCCceeEEEEEEcCCCceEEEeeceEEEeeccc
Q 028002 134 GRKGWP----EFAPYDAIHVGAAAPEIPQAL--IDQLKPGGRMVIPVGNIFQDLKVVDKNQDGSLSIWSETSVRYVPLTS 207 (215)
Q Consensus 134 ~~~~~~----~~~~~D~V~~~~~~~~~~~~~--~~~Lk~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 207 (215)
+.+... ..++||+|+++++.....+.+ ...++|++.++++++.... ........+..|.......+.+.|.|+
T Consensus 343 ~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~l~~~~p~~ivyvsc~p~tl-ard~~~l~~~Gy~~~~~~~~d~Fp~t~ 421 (433)
T 1uwv_A 343 LEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATL-ARDSEALLKAGYTIARLAMLDMFPHTG 421 (433)
T ss_dssp TTSCCSSSGGGTTCCSEEEECCCTTCCHHHHHHHHHHCCSEEEEEESCHHHH-HHHHHHHHHTTCEEEEEEEECCSTTSS
T ss_pred HHHHhhhhhhhcCCCCEEEECCCCccHHHHHHHHHhcCCCeEEEEECChHHH-HhhHHHHHHCCcEEEEEEEeccCCCCC
Confidence 987432 235799999998876544322 2236899988887654321 111112223567777778888999999
Q ss_pred CccccC
Q 028002 208 RDAQLR 213 (215)
Q Consensus 208 ~~~~~~ 213 (215)
+.+.+.
T Consensus 422 HvE~v~ 427 (433)
T 1uwv_A 422 HLESMV 427 (433)
T ss_dssp CCEEEE
T ss_pred eEEEEE
Confidence 887653
No 189
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.44 E-value=1.4e-13 Score=107.94 Aligned_cols=108 Identities=20% Similarity=0.149 Sum_probs=79.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccC-----------ccc-----------
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAP-----------LLK----------- 123 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~-----------~~~----------- 123 (215)
..++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.+++++....... ..+
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACE-SF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGG-TE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhc-cc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 356689999999999999888876 33 589999999999999998875421000 000
Q ss_pred -CCCe-EEEeCCCCCCCC-CC---CCccEEEEccCCC----C------chHHHHHhcCCCcEEEEEeC
Q 028002 124 -EGSL-SVHVGDGRKGWP-EF---APYDAIHVGAAAP----E------IPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 124 -~~~v-~~~~~d~~~~~~-~~---~~~D~V~~~~~~~----~------~~~~~~~~Lk~gG~lv~~~~ 175 (215)
..++ .+..+|+....+ .. ++||+|++...++ + +++++.++|||||+|++...
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 0127 899999876533 33 6899999988776 3 33568899999999999763
No 190
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.44 E-value=1.7e-13 Score=108.67 Aligned_cols=107 Identities=22% Similarity=0.240 Sum_probs=83.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
..+.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++...... +..++++++.+|+..... ..++||
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~--~~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGK--LDDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTT--TTSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccc--cCCCceEEEECcHHHHHhhCCCCee
Confidence 346899999999999999998763 3479999999999999999987543110 223689999999875322 236899
Q ss_pred EEEEccCCC----------CchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAP----------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~----------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++...+ .+.+.+.+.|+|||++++...+
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 999987542 4567899999999999998654
No 191
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.44 E-value=1.8e-13 Score=100.52 Aligned_cols=103 Identities=22% Similarity=0.295 Sum_probs=79.7
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+. +..++.+|||+|||+|..+..+++.+++..+++++|+++ +++. .++.+..+|..
T Consensus 11 ~~~~~~~~-~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------~~~~~~~~d~~ 72 (180)
T 1ej0_A 11 DEIQQSDK-LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------VGVDFLQGDFR 72 (180)
T ss_dssp HHHHHHHC-CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------TTEEEEESCTT
T ss_pred HHHHHHhC-CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------CcEEEEEcccc
Confidence 34444443 357788999999999999999999876668999999998 6421 47889999987
Q ss_pred CCC--------CCCCCccEEEEccCCC-----------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 136 KGW--------PEFAPYDAIHVGAAAP-----------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 136 ~~~--------~~~~~~D~V~~~~~~~-----------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
... ...++||+|+++.+++ .+++.+.++|+|||.+++....
T Consensus 73 ~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 73 DELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp SHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred cchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 652 2336899999987764 3456788999999999997654
No 192
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.44 E-value=1.9e-12 Score=102.47 Aligned_cols=100 Identities=22% Similarity=0.216 Sum_probs=78.9
Q ss_pred CCCEEEEEcCCc---cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC-------
Q 028002 68 PGMHALDIGSGT---GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG------- 137 (215)
Q Consensus 68 ~~~~vLdiG~G~---G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~------- 137 (215)
+..+|||+|||+ |..+..+.+. .+..+|+++|+|+.+++.+++++... .++.++.+|+.+.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~~--------~~v~~~~~D~~~~~~~~~~~ 147 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAKD--------PNTAVFTADVRDPEYILNHP 147 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTTC--------TTEEEEECCTTCHHHHHHSH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCCC--------CCeEEEEeeCCCchhhhccc
Confidence 347999999999 9887766665 46689999999999999999887431 5799999998652
Q ss_pred ----CCCCCCccEEEEccCCCCch--------HHHHHhcCCCcEEEEEeCC
Q 028002 138 ----WPEFAPYDAIHVGAAAPEIP--------QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 138 ----~~~~~~~D~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~~ 176 (215)
..+.++||+|++...++++. +++.+.|+|||+|++....
T Consensus 148 ~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 148 DVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred hhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 12225799999998776543 5788999999999997644
No 193
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.44 E-value=1.1e-13 Score=110.56 Aligned_cols=105 Identities=20% Similarity=0.186 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHh---CCCCe--EEEEecChHHHHHHHHHHHhhcccCcccCCCeEE--EeCCCCCCC-
Q 028002 67 KPGMHALDIGSGTGYLTACFALMV---GPQGR--AVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSV--HVGDGRKGW- 138 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~--v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~--~~~d~~~~~- 138 (215)
.++.+|||+|||+|.++..+++.+ .+... ++++|+|+.|++.+++++..... ..++.+ ..++.....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~-----~~~v~~~~~~~~~~~~~~ 125 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN-----LENVKFAWHKETSSEYQS 125 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS-----CTTEEEEEECSCHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC-----CCcceEEEEecchhhhhh
Confidence 456799999999998776543322 23353 49999999999999988764211 134444 455443221
Q ss_pred -----CCCCCccEEEEccCCCCch------HHHHHhcCCCcEEEEEeCC
Q 028002 139 -----PEFAPYDAIHVGAAAPEIP------QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 139 -----~~~~~~D~V~~~~~~~~~~------~~~~~~Lk~gG~lv~~~~~ 176 (215)
...++||+|++...++++. .++.++|||||++++...+
T Consensus 126 ~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 126 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1237899999999887654 6789999999999987543
No 194
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.43 E-value=3.8e-13 Score=111.47 Aligned_cols=105 Identities=16% Similarity=0.135 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCC-CeEEEeCCCCCCCC----CC
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEG-SLSVHVGDGRKGWP----EF 141 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~----~~ 141 (215)
.++.+|||+|||+|.++..+++. +. .+|+++|+|+.+++.|++++..++.. . +++++.+|+.+... ..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga-~~V~~vD~s~~al~~A~~N~~~n~~~-----~~~v~~~~~D~~~~l~~~~~~~ 283 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GA-MATTSVDLAKRSRALSLAHFEANHLD-----MANHQLVVMDVFDYFKYARRHH 283 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TB-SEEEEEESCTTHHHHHHHHHHHTTCC-----CTTEEEEESCHHHHHHHHHHTT
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHcCCC-----ccceEEEECCHHHHHHHHHHhC
Confidence 56789999999999999999985 32 58999999999999999999887652 3 79999999865332 12
Q ss_pred CCccEEEEccCCC-----C----------chHHHHHhcCCCcEEEEEeCCCc
Q 028002 142 APYDAIHVGAAAP-----E----------IPQALIDQLKPGGRMVIPVGNIF 178 (215)
Q Consensus 142 ~~~D~V~~~~~~~-----~----------~~~~~~~~Lk~gG~lv~~~~~~~ 178 (215)
.+||+|+++++.. . +...+.++|+|||.|+++++...
T Consensus 284 ~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 284 LTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp CCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 5899999987662 1 22345789999999999887643
No 195
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.43 E-value=1.1e-12 Score=108.09 Aligned_cols=101 Identities=25% Similarity=0.324 Sum_probs=83.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.. ++++++.+|+.+..+ ..||
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~--~~~D 250 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLA-----DRVTVAEGDFFKPLP--VTAD 250 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT-----TTEEEEECCTTSCCS--CCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCC-----CceEEEeCCCCCcCC--CCCC
Confidence 4567899999999999999999985 5579999999 99999999998776543 489999999876443 3499
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEEeC
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+|++...++++ ++++.+.|+|||++++...
T Consensus 251 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 251 VVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99999887643 4568899999999988654
No 196
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.43 E-value=7.3e-13 Score=105.51 Aligned_cols=115 Identities=22% Similarity=0.276 Sum_probs=88.2
Q ss_pred Ccc-cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccC
Q 028002 46 NAT-ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKE 124 (215)
Q Consensus 46 ~~~-~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~ 124 (215)
|++ +..+.+...+++.+. ..++.+|||+|||+|.++..+++.. .+++++|+|+.+++.+++++...+..
T Consensus 7 gq~fl~d~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~----- 76 (285)
T 1zq9_A 7 GQHILKNPLIINSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVA----- 76 (285)
T ss_dssp -CCEECCHHHHHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTG-----
T ss_pred CcCccCCHHHHHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCC-----
Confidence 444 357777888888876 6788999999999999999999884 68999999999999999987654321
Q ss_pred CCeEEEeCCCCCCCCCCCCccEEEEccCCCCch---------------------HHH--HHhcCCCcEEEE
Q 028002 125 GSLSVHVGDGRKGWPEFAPYDAIHVGAAAPEIP---------------------QAL--IDQLKPGGRMVI 172 (215)
Q Consensus 125 ~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~~~---------------------~~~--~~~Lk~gG~lv~ 172 (215)
.+++++.+|+..... ..||+|+++.++.... +++ +.+++|||.++.
T Consensus 77 ~~v~~~~~D~~~~~~--~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 77 SKLQVLVGDVLKTDL--PFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp GGEEEEESCTTTSCC--CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred CceEEEEcceecccc--hhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 479999999976533 3799999986553211 222 358999998754
No 197
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.43 E-value=1.3e-12 Score=106.10 Aligned_cols=99 Identities=19% Similarity=0.242 Sum_probs=82.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..+ .+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.. ++++++.+|+.+..+ +.||
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~--~~~D 235 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAG-----ERVSLVGGDMLQEVP--SNGD 235 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHT-----TSEEEEESCTTTCCC--SSCS
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCC-----CcEEEecCCCCCCCC--CCCC
Confidence 344 899999999999999999985 5579999999 99999999988765543 589999999877433 6799
Q ss_pred EEEEccCCCC--------chHHHHHhcCCCcEEEEEe
Q 028002 146 AIHVGAAAPE--------IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~--------~~~~~~~~Lk~gG~lv~~~ 174 (215)
+|++...+++ +++++.+.|+|||++++..
T Consensus 236 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 236 IYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999988864 3456889999999999864
No 198
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.43 E-value=2.3e-13 Score=110.61 Aligned_cols=107 Identities=21% Similarity=0.190 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC--CCCCc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--EFAPY 144 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~ 144 (215)
.++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.|++++..... .+...+++++.+|+..... ..++|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~--gl~~~rv~~~~~D~~~~l~~~~~~~f 195 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAI--GYEDPRVNLVIGDGVAFLKNAAEGSY 195 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHG--GGGSTTEEEEESCHHHHHHTSCTTCE
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEECCHHHHHHhccCCCc
Confidence 456899999999999999999873 447999999999999999998765310 0122689999999765321 23689
Q ss_pred cEEEEccCC----------CCchHHHHHhcCCCcEEEEEeCC
Q 028002 145 DAIHVGAAA----------PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 145 D~V~~~~~~----------~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+|+++... ..+++.+.++|+|||+|++...+
T Consensus 196 DlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 196 DAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 999997652 23557889999999999997544
No 199
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.42 E-value=2e-12 Score=105.03 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=82.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.. +++++..+|+....+ ..||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~p--~~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLS-----GRAQVVVGSFFDPLP--AGAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT-----TTEEEEECCTTSCCC--CSCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcC-----cCeEEecCCCCCCCC--CCCcEE
Confidence 45799999999999999999985 6679999999 99999999998876543 689999999975443 379999
Q ss_pred EEccCCCCch--------HHHHHhcCCCcEEEEEeC
Q 028002 148 HVGAAAPEIP--------QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 148 ~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~~ 175 (215)
++...++++. +++.+.|+|||+|++...
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 9998886544 467899999999998654
No 200
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.42 E-value=9.2e-13 Score=107.77 Aligned_cols=98 Identities=15% Similarity=0.155 Sum_probs=82.1
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC--CCCCCccE
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW--PEFAPYDA 146 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~D~ 146 (215)
+.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.. ++++++.+|+.+.. .. +.||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~-~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLG-----GRVEFFEKNLLDARNFEG-GAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCG-----GGEEEEECCTTCGGGGTT-CCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCC-----CceEEEeCCcccCcccCC-CCccE
Confidence 7899999999999999999985 5689999999 88999999988776543 57999999988754 33 57999
Q ss_pred EEEccCCCCch--------HHHHHhcCCCcEEEEEe
Q 028002 147 IHVGAAAPEIP--------QALIDQLKPGGRMVIPV 174 (215)
Q Consensus 147 V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~ 174 (215)
|++...++++. +++.+.|+|||+|++..
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99998886543 46789999999999853
No 201
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.41 E-value=4.4e-13 Score=107.36 Aligned_cols=107 Identities=17% Similarity=0.177 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
..+.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...... ...++++++.+|+..... ..++||
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCG--FDDPRAEIVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGG--GGCTTEEEEESCHHHHGGGCSSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccc--cCCCceEEEECcHHHHHhhCCCCce
Confidence 345899999999999999999874 4479999999999999999987542110 123689999999765322 236899
Q ss_pred EEEEccCCC-----------CchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAP-----------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~-----------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++...+ .+++.+.+.|+|||++++.+.+
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 999876433 3457889999999999998655
No 202
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.41 E-value=3.6e-12 Score=104.60 Aligned_cols=108 Identities=19% Similarity=0.172 Sum_probs=86.1
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+. ..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.. ++++++.+|+.
T Consensus 180 ~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~ 250 (359)
T 1x19_A 180 QLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVA-----DRMRGIAVDIY 250 (359)
T ss_dssp HHHHHHCC--CTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCT-----TTEEEEECCTT
T ss_pred HHHHHhcC--CCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCC-----CCEEEEeCccc
Confidence 34444443 5667899999999999999999985 5579999999 99999999998876543 46999999998
Q ss_pred CCCCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 136 KGWPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
+.... .+|+|++...++++ ++++.+.|+|||++++..
T Consensus 251 ~~~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 251 KESYP--EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp TSCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred cCCCC--CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 75333 34999999887654 356789999999997754
No 203
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.41 E-value=4.1e-13 Score=106.97 Aligned_cols=117 Identities=17% Similarity=0.128 Sum_probs=77.4
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhccc----------Cccc-
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAA----------PLLK- 123 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~----------~~~~- 123 (215)
...+.+.+.....++.+|||+|||+|..+..++... ..+|+|+|+|+.+++.|++++...... ..+.
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcC
Confidence 445555554223467899999999999544333322 269999999999999998865421000 0000
Q ss_pred -------------CCCeEEEeCCCCCCCC------CCCCccEEEEccCCCC----c------hHHHHHhcCCCcEEEEE
Q 028002 124 -------------EGSLSVHVGDGRKGWP------EFAPYDAIHVGAAAPE----I------PQALIDQLKPGGRMVIP 173 (215)
Q Consensus 124 -------------~~~v~~~~~d~~~~~~------~~~~~D~V~~~~~~~~----~------~~~~~~~Lk~gG~lv~~ 173 (215)
...+.++.+|+....+ ..++||+|++...+++ + ++++.++|||||+|++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 136 KGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp SCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 0125677778876221 1256999999988765 2 35688999999999996
No 204
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.41 E-value=3.9e-13 Score=114.29 Aligned_cols=100 Identities=19% Similarity=0.142 Sum_probs=79.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++...+.. ++++++.+|+.+.... ++||
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~-----~~v~~~~~d~~~~~~~-~~fD 226 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLT-----DRIVVIPGKVEEVSLP-EQVD 226 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCT-----TTEEEEESCTTTCCCS-SCEE
T ss_pred hcCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCC-----CcEEEEECchhhCccC-CCeE
Confidence 456789999999999999998875 3 36999999998 999999998887654 5899999999874333 6899
Q ss_pred EEEEccCCCC--------chHHHHHhcCCCcEEEEEe
Q 028002 146 AIHVGAAAPE--------IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~--------~~~~~~~~Lk~gG~lv~~~ 174 (215)
+|+++....+ .+..+.++|||||.+++..
T Consensus 227 ~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 227 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999765322 2234578999999998643
No 205
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.41 E-value=3.4e-13 Score=112.23 Aligned_cols=105 Identities=19% Similarity=0.294 Sum_probs=85.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC----CC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----EF 141 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~ 141 (215)
..++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.|++++..++.. .+++++.+|+.+... ..
T Consensus 215 ~~~~~~VLDl~~G~G~~~~~la~~-g~-~~v~~vD~s~~~l~~a~~n~~~n~~~-----~~v~~~~~d~~~~~~~~~~~~ 287 (396)
T 2as0_A 215 VQPGDRVLDVFTYTGGFAIHAAIA-GA-DEVIGIDKSPRAIETAKENAKLNGVE-----DRMKFIVGSAFEEMEKLQKKG 287 (396)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHHHHTTCG-----GGEEEEESCHHHHHHHHHHTT
T ss_pred hhCCCeEEEecCCCCHHHHHHHHC-CC-CEEEEEeCCHHHHHHHHHHHHHcCCC-----ccceEEECCHHHHHHHHHhhC
Confidence 347899999999999999999986 32 68999999999999999999887653 379999999865432 13
Q ss_pred CCccEEEEccCCC---------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 142 APYDAIHVGAAAP---------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 142 ~~~D~V~~~~~~~---------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
++||+|+++++.- .+...+.++|+|||.+++++++.
T Consensus 288 ~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 288 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 6899999987652 23456789999999999987764
No 206
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.41 E-value=2.1e-12 Score=103.07 Aligned_cols=98 Identities=15% Similarity=0.083 Sum_probs=81.2
Q ss_pred CCc-ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCccc
Q 028002 45 YNA-TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLK 123 (215)
Q Consensus 45 ~~~-~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~ 123 (215)
+|+ ++..+.+...+++.+. ..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+++++...
T Consensus 28 ~GQnfL~d~~i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~------- 95 (295)
T 3gru_A 28 LGQCFLIDKNFVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELY------- 95 (295)
T ss_dssp --CCEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHC-------
T ss_pred cCccccCCHHHHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccC-------
Confidence 355 5677888899999886 7788999999999999999999984 79999999999999999988631
Q ss_pred CCCeEEEeCCCCCCCCCCCCccEEEEccCCCC
Q 028002 124 EGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPE 155 (215)
Q Consensus 124 ~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~ 155 (215)
.+++++.+|+.........||.|+++.++.-
T Consensus 96 -~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 96 -NNIEIIWGDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp -SSEEEEESCTTTSCGGGSCCSEEEEECCGGG
T ss_pred -CCeEEEECchhhCCcccCCccEEEEeCcccc
Confidence 5899999999875444357999999977643
No 207
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.41 E-value=2.3e-12 Score=105.76 Aligned_cols=102 Identities=25% Similarity=0.317 Sum_probs=83.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.. .+++++.+|+.+..+ ..||
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~~--~~~D 251 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLS-----DRVDVVEGDFFEPLP--RKAD 251 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCT-----TTEEEEECCTTSCCS--SCEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCC-----CceEEEeCCCCCCCC--CCcc
Confidence 4567899999999999999999984 6679999999 99999999998876543 489999999876444 3499
Q ss_pred EEEEccCCCC--------chHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAPE--------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~~--------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++...+++ +++++.+.|+|||++++....
T Consensus 252 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 252 AIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999888754 345688999999999986443
No 208
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.41 E-value=1.8e-13 Score=113.31 Aligned_cols=101 Identities=23% Similarity=0.212 Sum_probs=84.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC----CCCC
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----EFAP 143 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~ 143 (215)
++.+|||+|||+|..+..+++.. .+|+++|+++.+++.|++++..++. .+++++.+|+.+... ...+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~n~~~n~~------~~~~~~~~d~~~~~~~~~~~~~~ 279 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF---REVVAVDSSAEALRRAEENARLNGL------GNVRVLEANAFDLLRRLEKEGER 279 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE---EEEEEEESCHHHHHHHHHHHHHTTC------TTEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCeEEEeeeccCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC------CCceEEECCHHHHHHHHHhcCCC
Confidence 77899999999999999999873 7999999999999999999988765 358999999876432 1368
Q ss_pred ccEEEEccCCC---------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 144 YDAIHVGAAAP---------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 144 ~D~V~~~~~~~---------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
||+|+++++.- .++..+.++|+|||.|+++++..
T Consensus 280 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 280 FDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred eeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99999987651 24456889999999999987764
No 209
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.41 E-value=1.8e-12 Score=105.81 Aligned_cols=103 Identities=18% Similarity=0.185 Sum_probs=83.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCC----CeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQ----GRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEF 141 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~----~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (215)
..++.+|||+|||+|.++..+++.+... .+++|+|+++.+++.|+.++...+. ++.+..+|.......
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-------~~~i~~~D~l~~~~~- 199 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-------KMTLLHQDGLANLLV- 199 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-------CCEEEESCTTSCCCC-
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-------CceEEECCCCCcccc-
Confidence 3456899999999999999998886322 6899999999999999998876542 578999998765443
Q ss_pred CCccEEEEccCCCC------------------------chHHHHHhcCCCcEEEEEeCC
Q 028002 142 APYDAIHVGAAAPE------------------------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 142 ~~~D~V~~~~~~~~------------------------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+.||+|++++++.. ++..+.+.|+|||++++.+++
T Consensus 200 ~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 200 DPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp CCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred CCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 68999999988532 356678999999999998854
No 210
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.41 E-value=6.3e-13 Score=110.57 Aligned_cols=104 Identities=19% Similarity=0.099 Sum_probs=84.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcc-cCcccCCCeEEEeCCCCCCCCC----C
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAA-APLLKEGSLSVHVGDGRKGWPE----F 141 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~----~ 141 (215)
.++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|++++..++. . .+++++.+|+.+.... .
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~-g-~~~V~~vD~s~~al~~a~~n~~~ngl~~-----~~v~~~~~D~~~~~~~~~~~~ 291 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG-G-CSQVVSVDTSQEALDIARQNVELNKLDL-----SKAEFVRDDVFKLLRTYRDRG 291 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCG-----GGEEEEESCHHHHHHHHHHTT
T ss_pred hCCCeEEEeeccCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-----cceEEEECCHHHHHHHHHhcC
Confidence 56789999999999999999986 3 26899999999999999999987664 2 3789999998764321 2
Q ss_pred CCccEEEEccCCC---------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 142 APYDAIHVGAAAP---------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 142 ~~~D~V~~~~~~~---------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
.+||+|+++++.. .+...+.+.|+|||+++++++..
T Consensus 292 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 292 EKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp CCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 6899999997651 23456789999999999987664
No 211
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.41 E-value=3.4e-13 Score=108.36 Aligned_cols=107 Identities=20% Similarity=0.158 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
.++.+|||+|||+|..+..+++. .+..+++++|+++.+++.|++++..... .+..++++++.+|+..... ..++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~--~~~~~rv~v~~~Da~~~l~~~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAI--GYSSSKLTLHVGDGFEFMKQNQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHTCSSCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHhhCCCCce
Confidence 45689999999999999999987 3457999999999999999998765210 0123689999999765321 236899
Q ss_pred EEEEccCC----------CCchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAA----------PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~----------~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++... ..+++.+.++|+|||++++...+
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99988754 23567889999999999997633
No 212
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.40 E-value=3.5e-12 Score=102.51 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=69.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCC---C
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEF---A 142 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~ 142 (215)
+.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++++...+. .++.++.+|+....... +
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~------~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV------SCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGGSCTTCGGGT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEeCChHhcCccccccC
Confidence 77899999999999999999999876668999999999999999999988665 57999999987654321 4
Q ss_pred CccEEEEccCC
Q 028002 143 PYDAIHVGAAA 153 (215)
Q Consensus 143 ~~D~V~~~~~~ 153 (215)
+||.|+++.++
T Consensus 174 ~fD~Vl~D~Pc 184 (309)
T 2b9e_A 174 EVHYILLDPSC 184 (309)
T ss_dssp TEEEEEECCCC
T ss_pred CCCEEEEcCCc
Confidence 79999987654
No 213
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.39 E-value=1.5e-12 Score=106.08 Aligned_cols=99 Identities=11% Similarity=0.095 Sum_probs=83.9
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|.++.. ++ + ..+|+++|+++.+++.+++++..++.. .++.++.+|+.+.. +.||
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~-----~~v~~~~~D~~~~~---~~fD 260 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLE-----HKIIPILSDVREVD---VKGN 260 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEESCGGGCC---CCEE
T ss_pred cCCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEECChHHhc---CCCc
Confidence 56789999999999999999 76 2 279999999999999999999887653 47999999988765 7899
Q ss_pred EEEEccCC--CCchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAA--PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~--~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++.+. ..+.+.+.++|+|||.+++....
T Consensus 261 ~Vi~dpP~~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 261 RVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp EEEECCTTTGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCcHhHHHHHHHHHHHcCCCCEEEEEEee
Confidence 99998654 35778899999999999886543
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.39 E-value=1.9e-13 Score=108.72 Aligned_cols=106 Identities=22% Similarity=0.198 Sum_probs=81.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcc-------cCCCeEEEeCCCCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLL-------KEGSLSVHVGDGRKGW 138 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~-------~~~~v~~~~~d~~~~~ 138 (215)
..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++ ... ..+ ..++++++.+|+....
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~--~~l~~~~~~~~~~~v~~~~~D~~~~l 147 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KID--NGLLEAMLNGKHEKAKLTIGDGFEFI 147 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTT--TTHHHHHHTTCCSSEEEEESCHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhc--cccccccccCCCCcEEEEECchHHHh
Confidence 345689999999999999999987 4 379999999999999999987 320 001 2368999999975432
Q ss_pred CCCCCccEEEEccCC----------CCchHHHHHhcCCCcEEEEEeCC
Q 028002 139 PEFAPYDAIHVGAAA----------PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~----------~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
...++||+|+++... ..+.+.+.+.|+|||++++...+
T Consensus 148 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 148 KNNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp HHCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 113689999998764 22457889999999999997543
No 215
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=3.7e-13 Score=108.05 Aligned_cols=99 Identities=26% Similarity=0.266 Sum_probs=79.7
Q ss_pred CEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC--CCCCccEE
Q 028002 70 MHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--EFAPYDAI 147 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~D~V 147 (215)
.+|||||||+|.++..+++.. +..+++++|+++.+++.|++++... ...+++++.+|+..... ..++||+|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~------~~~rv~v~~~Da~~~l~~~~~~~fDvI 163 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIP------RAPRVKIRVDDARMVAESFTPASRDVI 163 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCC------CTTTEEEEESCHHHHHHTCCTTCEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhcccc------CCCceEEEECcHHHHHhhccCCCCCEE
Confidence 499999999999999999975 4579999999999999999987532 12689999999875432 23689999
Q ss_pred EEccCCC----------CchHHHHHhcCCCcEEEEEeC
Q 028002 148 HVGAAAP----------EIPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 148 ~~~~~~~----------~~~~~~~~~Lk~gG~lv~~~~ 175 (215)
+++...+ .+++.+.++|+|||+|++.+.
T Consensus 164 i~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 164 IRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp EECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 9975432 245788999999999999765
No 216
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.39 E-value=4.7e-13 Score=107.88 Aligned_cols=107 Identities=16% Similarity=0.106 Sum_probs=82.0
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++..... .+..++++++.+|+..... ..++||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~--~~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSC--GFSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSG--GGGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhcc--ccCCCCEEEEEChHHHHHHhcCCCce
Confidence 445899999999999999999863 457999999999999999998754310 0123689999999865322 236899
Q ss_pred EEEEccCC----------CCchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAA----------PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~----------~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++... ..+++.+.++|+|||++++...+
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 99987742 35667889999999999997644
No 217
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.38 E-value=1.2e-13 Score=106.87 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=70.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe-CC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV-GD 133 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~-~d 133 (215)
+..+++.+. ...++.+|||+|||+|.++..+++. +. .+|+|+|+|+.+++.++++....... ...++.+.. .+
T Consensus 25 L~~~L~~~~-~~~~g~~VLDiGcGtG~~t~~la~~-g~-~~V~gvDis~~ml~~a~~~~~~~~~~---~~~~~~~~~~~~ 98 (232)
T 3opn_A 25 LEKALKEFH-LEINGKTCLDIGSSTGGFTDVMLQN-GA-KLVYALDVGTNQLAWKIRSDERVVVM---EQFNFRNAVLAD 98 (232)
T ss_dssp HHHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEECSSCCCCCHHHHTCTTEEEE---CSCCGGGCCGGG
T ss_pred HHHHHHHcC-CCCCCCEEEEEccCCCHHHHHHHhc-CC-CEEEEEcCCHHHHHHHHHhCcccccc---ccceEEEeCHhH
Confidence 455566654 1234679999999999999999987 43 59999999999999876643211100 001221111 12
Q ss_pred CCCCCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 134 GRKGWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
.....++...||++++. +..+++++.++|||||.+++.+
T Consensus 99 ~~~~~~d~~~~D~v~~~--l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 99 FEQGRPSFTSIDVSFIS--LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CCSCCCSEEEECCSSSC--GGGTHHHHHHHSCTTCEEEEEE
T ss_pred cCcCCCCEEEEEEEhhh--HHHHHHHHHHhccCCCEEEEEE
Confidence 21111111234444433 2567789999999999999964
No 218
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.37 E-value=9.9e-12 Score=98.72 Aligned_cols=107 Identities=15% Similarity=0.186 Sum_probs=75.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEec-ChHHHHHHHHHHH-----hhcccCcccCCCeEEEeCCCCCCC--
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEH-IPELVVSSIQNIE-----KSAAAPLLKEGSLSVHVGDGRKGW-- 138 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~-s~~~~~~a~~~~~-----~~~~~~~~~~~~v~~~~~d~~~~~-- 138 (215)
.++.+|||+|||+|.++..+++. +. .+|+++|+ ++.+++.+++++. ..+... ....++.+...++.+..
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~~-~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~-~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-GA-DQVVATDYPDPEILNSLESNIREHTANSCSSET-VKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-TC-SEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCTHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-CC-CEEEEEeCCCHHHHHHHHHHHHHhhhhhccccc-CCCCCeEEEEecCCCccHH
Confidence 56789999999999999988876 43 58999999 8999999999983 322100 00026777766654321
Q ss_pred -C---CCCCccEEEEccCCCC------chHHHHHhcC---C--CcEEEEEeCC
Q 028002 139 -P---EFAPYDAIHVGAAAPE------IPQALIDQLK---P--GGRMVIPVGN 176 (215)
Q Consensus 139 -~---~~~~~D~V~~~~~~~~------~~~~~~~~Lk---~--gG~lv~~~~~ 176 (215)
. ..++||+|++...+.+ +++.+.++|+ | ||.+++.+..
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred HHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 1 2368999998666543 4467889999 9 9988775443
No 219
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.37 E-value=5.1e-13 Score=106.30 Aligned_cols=107 Identities=19% Similarity=0.220 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
.++.+|||+|||+|..+..+++. .+..+++++|+++.+++.+++++...+.. ...++++++.+|+..... ..++||
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCG--YEDKRVNVFIEDASKFLENVTNTYD 153 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGG--GGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccc--cCCCcEEEEECChHHHHHhCCCCce
Confidence 45689999999999999999876 34579999999999999999987543210 123689999999865322 137899
Q ss_pred EEEEccCCC----------CchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAP----------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~----------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++...+ .+.+.+.+.|+|||++++...+
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 999976432 3456789999999999998654
No 220
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.37 E-value=1.6e-12 Score=99.45 Aligned_cols=95 Identities=24% Similarity=0.327 Sum_probs=76.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC--CCCCCCc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG--WPEFAPY 144 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~ 144 (215)
.++.+|||+|||+|..+..+++. + .+++++|+++.+++.++++. ..+..+|+... ....++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~-------------~~~~~~d~~~~~~~~~~~~f 94 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL-------------DHVVLGDIETMDMPYEEEQF 94 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS-------------SEEEESCTTTCCCCSCTTCE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC-------------CcEEEcchhhcCCCCCCCcc
Confidence 56789999999999999999887 4 79999999999999887532 36778887652 2233789
Q ss_pred cEEEEccCCCCc------hHHHHHhcCCCcEEEEEeCCC
Q 028002 145 DAIHVGAAAPEI------PQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 145 D~V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|+|++...++++ ++.+.++|+|||.+++.+++.
T Consensus 95 D~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp EEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred CEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999998877654 356788999999999987663
No 221
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.37 E-value=3.8e-12 Score=100.58 Aligned_cols=109 Identities=14% Similarity=0.167 Sum_probs=77.3
Q ss_pred CCCEEEEEcCCccH----HHHHHHHHhCC---CCeEEEEecChHHHHHHHHHHHhhcc----------------c---C-
Q 028002 68 PGMHALDIGSGTGY----LTACFALMVGP---QGRAVGVEHIPELVVSSIQNIEKSAA----------------A---P- 120 (215)
Q Consensus 68 ~~~~vLdiG~G~G~----~~~~l~~~~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~----------------~---~- 120 (215)
+..+|||+|||||. +++.+++.++. ..+|+|+|+|+.+++.|+++...... . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55666666542 24899999999999999986421000 0 0
Q ss_pred ccc-----CCCeEEEeCCCCCC-CCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEeCC
Q 028002 121 LLK-----EGSLSVHVGDGRKG-WPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 121 ~~~-----~~~v~~~~~d~~~~-~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~~~ 176 (215)
... ..++.|.+.|+.+. ++..++||+|+|...+.++ ++.+.+.|+|||+|++-...
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 000 03689999998874 3323789999998876443 35678899999999995443
No 222
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.36 E-value=8e-13 Score=106.95 Aligned_cols=107 Identities=18% Similarity=0.179 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
.++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.|++++..... ....++++++.+|+..... ..++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~--~~~~~~v~~~~~D~~~~l~~~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISC--GYEDKRVNVFIEDASKFLENVTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSG--GGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEEccHHHHHhhcCCCce
Confidence 456899999999999999998763 447999999999999999998764210 1223689999999765321 236899
Q ss_pred EEEEccCC----------CCchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAA----------PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~----------~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++... ..+.+.+.+.|+|||++++...+
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99987632 23457789999999999997654
No 223
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.36 E-value=1.1e-12 Score=105.86 Aligned_cols=107 Identities=20% Similarity=0.226 Sum_probs=81.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++...... .+..++++++.+|+..... ..++||
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~-~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQG-AFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTT-GGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccc-cccCCceEEEEchHHHHHHhcCCCcc
Confidence 456899999999999999999863 4479999999999999999987542100 0112689999999865321 236899
Q ss_pred EEEEccCCCC-------------chHHHHHhcCCCcEEEEEeC
Q 028002 146 AIHVGAAAPE-------------IPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 146 ~V~~~~~~~~-------------~~~~~~~~Lk~gG~lv~~~~ 175 (215)
+|+++...+. +++.+.+.|+|||++++...
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9999876543 34678999999999999753
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.35 E-value=4.6e-13 Score=105.36 Aligned_cols=101 Identities=12% Similarity=-0.067 Sum_probs=80.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
.+.+|||+|||+|..+..+++. + .+++++|+++.+++.|++++..... .+..++++++.+|+.... ++||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~--~~~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHE--VKNNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHH--HHTCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhcc--ccCCCeEEEEechHHHHH---hhCCEE
Confidence 4579999999999999999887 4 7999999999999999887643210 012368999999987755 689999
Q ss_pred EEccCCCC-chHHHHHhcCCCcEEEEEeCC
Q 028002 148 HVGAAAPE-IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 148 ~~~~~~~~-~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+++...+. +++.+.+.|+|||++++..++
T Consensus 144 i~d~~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 144 FCLQEPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp EESSCCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EECCCChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99865443 468899999999999997544
No 225
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.34 E-value=3e-12 Score=108.07 Aligned_cols=124 Identities=16% Similarity=0.165 Sum_probs=94.4
Q ss_pred CcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhC------------CCCeEEEEecChHHHHHHHHHH
Q 028002 46 NATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVG------------PQGRAVGVEHIPELVVSSIQNI 113 (215)
Q Consensus 46 ~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~~D~s~~~~~~a~~~~ 113 (215)
|.+.+.+.+...+++.+. ..++.+|||.|||+|.+...+++.+. ...+++|+|+++.+++.|+.++
T Consensus 151 G~fyTP~~v~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 151 GQYFTPRPLIQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp GGGCCCHHHHHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CcccCcHHHHHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 455555566677777765 66778999999999999998887641 1257999999999999999988
Q ss_pred HhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCC-----------------------chHHHHHhcCCCcEE
Q 028002 114 EKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPE-----------------------IPQALIDQLKPGGRM 170 (215)
Q Consensus 114 ~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~-----------------------~~~~~~~~Lk~gG~l 170 (215)
...+.. ..++.+.++|....... ..||+|++++++.. ++..+.++|+|||++
T Consensus 229 ~l~g~~----~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~ 303 (445)
T 2okc_A 229 YLHGIG----TDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRA 303 (445)
T ss_dssp HHTTCC----SSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEE
T ss_pred HHhCCC----cCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEE
Confidence 765542 11577889998765443 58999999987632 356788999999999
Q ss_pred EEEeCC
Q 028002 171 VIPVGN 176 (215)
Q Consensus 171 v~~~~~ 176 (215)
++.+|+
T Consensus 304 a~V~p~ 309 (445)
T 2okc_A 304 AVVLPD 309 (445)
T ss_dssp EEEEEH
T ss_pred EEEECC
Confidence 887754
No 226
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.33 E-value=1.8e-11 Score=101.58 Aligned_cols=123 Identities=14% Similarity=0.041 Sum_probs=92.7
Q ss_pred cccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCC----------------------------------
Q 028002 47 ATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGP---------------------------------- 92 (215)
Q Consensus 47 ~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~---------------------------------- 92 (215)
.....+.+.+.++.... ..++..|||.+||+|.+++.++.....
T Consensus 182 ~Apl~e~lAa~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~ 259 (393)
T 3k0b_A 182 SAPIKETMAAALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLAN 259 (393)
T ss_dssp SCSCCHHHHHHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCC
T ss_pred CCCCcHHHHHHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhc
Confidence 34445666666666554 677889999999999999988876421
Q ss_pred ---CCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCC----------chHH
Q 028002 93 ---QGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPE----------IPQA 159 (215)
Q Consensus 93 ---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~----------~~~~ 159 (215)
..+++|+|+++.+++.|++++...+.. +++++.++|+.+.... ++||+|++++++.. +...
T Consensus 260 ~~~~~~V~GvDid~~al~~Ar~Na~~~gl~-----~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~ 333 (393)
T 3k0b_A 260 YDQPLNIIGGDIDARLIEIAKQNAVEAGLG-----DLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYRE 333 (393)
T ss_dssp TTCCCCEEEEESCHHHHHHHHHHHHHTTCT-----TCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHH
T ss_pred ccCCceEEEEECCHHHHHHHHHHHHHcCCC-----CceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHH
Confidence 145999999999999999999887764 4699999999876554 68999999998732 2233
Q ss_pred HHHhcCC--CcEEEEEeCCC
Q 028002 160 LIDQLKP--GGRMVIPVGNI 177 (215)
Q Consensus 160 ~~~~Lk~--gG~lv~~~~~~ 177 (215)
+.+.||+ ||.+++.+++.
T Consensus 334 lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 334 MGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHHHTCTTCEEEEEECCT
T ss_pred HHHHHhcCCCCEEEEEECCH
Confidence 4455555 88888877653
No 227
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.33 E-value=4.3e-12 Score=96.95 Aligned_cols=91 Identities=18% Similarity=0.232 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.++.+|||+|||+|..+..+++ . +++|+++.+++.++++ ++.+..+|+.......++||+
T Consensus 46 ~~~~~vLDiG~G~G~~~~~l~~------~-~~vD~s~~~~~~a~~~-------------~~~~~~~d~~~~~~~~~~fD~ 105 (219)
T 1vlm_A 46 LPEGRGVEIGVGTGRFAVPLKI------K-IGVEPSERMAEIARKR-------------GVFVLKGTAENLPLKDESFDF 105 (219)
T ss_dssp CCSSCEEEETCTTSTTHHHHTC------C-EEEESCHHHHHHHHHT-------------TCEEEECBTTBCCSCTTCEEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHH------H-hccCCCHHHHHHHHhc-------------CCEEEEcccccCCCCCCCeeE
Confidence 3488999999999998876642 2 9999999999998764 467888888765444478999
Q ss_pred EEEccCCCCc------hHHHHHhcCCCcEEEEEeCCC
Q 028002 147 IHVGAAAPEI------PQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 147 V~~~~~~~~~------~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|++...++++ ++.+.++|+|||.+++..++.
T Consensus 106 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 106 ALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp EEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 9999877553 467889999999999986553
No 228
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.33 E-value=2.7e-12 Score=113.73 Aligned_cols=104 Identities=16% Similarity=0.151 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
.++.+|||+|||+|.++..+++. +. .+|+++|+|+.+++.+++++..++.. ..+++++++|+.+... ..++||
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-ga-~~V~aVD~s~~al~~a~~N~~~ngl~----~~~v~~i~~D~~~~l~~~~~~fD 611 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-GA-RSTTTVDMSRTYLEWAERNLRLNGLT----GRAHRLIQADCLAWLREANEQFD 611 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHHHHTTCC----STTEEEEESCHHHHHHHCCCCEE
T ss_pred cCCCcEEEeeechhHHHHHHHHC-CC-CEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEEecCHHHHHHhcCCCcc
Confidence 46889999999999999999875 43 67999999999999999999887642 2479999999876322 236899
Q ss_pred EEEEccCCC-----------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAP-----------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~-----------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+++++.- .+...+.++|+|||+|+++++.
T Consensus 612 ~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 612 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 999988641 1345678999999999998876
No 229
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.33 E-value=3e-12 Score=107.02 Aligned_cols=114 Identities=22% Similarity=0.192 Sum_probs=87.1
Q ss_pred CcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCC
Q 028002 46 NATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEG 125 (215)
Q Consensus 46 ~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 125 (215)
|+..+.+.+...+++.+. ..++.+|||+|||+|.++..+++..++..+++|+|+++.+++.| .
T Consensus 19 g~~~TP~~l~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------~ 81 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------P 81 (421)
T ss_dssp --CCCCHHHHHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------T
T ss_pred ceEeCCHHHHHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------C
Confidence 555565666677777664 34567999999999999999998764457999999999988765 2
Q ss_pred CeEEEeCCCCCCCCCCCCccEEEEccCCC-----------------------------------CchHHHHHhcCCCcEE
Q 028002 126 SLSVHVGDGRKGWPEFAPYDAIHVGAAAP-----------------------------------EIPQALIDQLKPGGRM 170 (215)
Q Consensus 126 ~v~~~~~d~~~~~~~~~~~D~V~~~~~~~-----------------------------------~~~~~~~~~Lk~gG~l 170 (215)
++.+.++|....... +.||+|++++++. .+++.+.++|+|||.+
T Consensus 82 ~~~~~~~D~~~~~~~-~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~ 160 (421)
T 2ih2_A 82 WAEGILADFLLWEPG-EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVL 160 (421)
T ss_dssp TEEEEESCGGGCCCS-SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEE
T ss_pred CCcEEeCChhhcCcc-CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEE
Confidence 678999998775443 6899999987652 1245677899999999
Q ss_pred EEEeCCC
Q 028002 171 VIPVGNI 177 (215)
Q Consensus 171 v~~~~~~ 177 (215)
++.+++.
T Consensus 161 ~~i~p~~ 167 (421)
T 2ih2_A 161 VFVVPAT 167 (421)
T ss_dssp EEEEEGG
T ss_pred EEEEChH
Confidence 9988764
No 230
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.33 E-value=5.1e-12 Score=94.65 Aligned_cols=94 Identities=21% Similarity=0.258 Sum_probs=71.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCC--------CeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE-eCCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQ--------GRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH-VGDGRK 136 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~--------~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~-~~d~~~ 136 (215)
+.++.+|||+|||+|..+..+++.+++. .+++++|+++.. . ..++.+. .+|+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~------~~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P------LEGATFLCPADVTD 82 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C------CTTCEEECSCCTTS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c------CCCCeEEEeccCCC
Confidence 5778999999999999999999987543 689999999831 0 1467888 888654
Q ss_pred CC--------CCCCCccEEEEccCCC-----------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 137 GW--------PEFAPYDAIHVGAAAP-----------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 137 ~~--------~~~~~~D~V~~~~~~~-----------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.. ...++||+|+++...+ .+++.+.++|||||.+++.+..
T Consensus 83 ~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 83 PRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 21 1225899999976443 3445678999999999998654
No 231
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.32 E-value=6.6e-12 Score=100.63 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=74.0
Q ss_pred cCCcc-cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcc
Q 028002 44 GYNAT-ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLL 122 (215)
Q Consensus 44 ~~~~~-~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 122 (215)
.+|++ +..+.+...+++.+. ..++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++...+.
T Consensus 19 ~~Gq~fl~~~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~---- 89 (299)
T 2h1r_A 19 FQGQHLLKNPGILDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGY---- 89 (299)
T ss_dssp ----CEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTC----
T ss_pred ccccceecCHHHHHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCC----
Confidence 44554 357778888888876 7788999999999999999998763 7999999999999999998865443
Q ss_pred cCCCeEEEeCCCCCCCCCCCCccEEEEccCCC
Q 028002 123 KEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAP 154 (215)
Q Consensus 123 ~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~ 154 (215)
.+++++.+|+..... ..||+|+++.+..
T Consensus 90 --~~v~~~~~D~~~~~~--~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 90 --NNLEVYEGDAIKTVF--PKFDVCTANIPYK 117 (299)
T ss_dssp --CCEEC----CCSSCC--CCCSEEEEECCGG
T ss_pred --CceEEEECchhhCCc--ccCCEEEEcCCcc
Confidence 589999999876543 4799999987754
No 232
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.32 E-value=1.4e-11 Score=102.01 Aligned_cols=121 Identities=16% Similarity=0.079 Sum_probs=91.2
Q ss_pred cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCC------------------------------------
Q 028002 49 ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGP------------------------------------ 92 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~------------------------------------ 92 (215)
...+.+.+.++.... ..++.+|||.+||+|.+++.++.....
T Consensus 178 pl~e~lAa~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 255 (385)
T 3ldu_A 178 PIRETLAAGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNE 255 (385)
T ss_dssp CCCHHHHHHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCS
T ss_pred CCcHHHHHHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhcc
Confidence 334555555555543 677899999999999999998876421
Q ss_pred -CCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCC----------chHHHH
Q 028002 93 -QGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPE----------IPQALI 161 (215)
Q Consensus 93 -~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~----------~~~~~~ 161 (215)
..+|+|+|+++.+++.|++++...+.. +++++.++|+.+.... ..||+|++++++.. +...+.
T Consensus 256 ~~~~V~GvDid~~ai~~Ar~Na~~~gl~-----~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg 329 (385)
T 3ldu_A 256 SKFKIYGYDIDEESIDIARENAEIAGVD-----EYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELG 329 (385)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHHTCG-----GGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCC-----CceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHH
Confidence 147999999999999999999887764 4799999999886554 68999999999742 223344
Q ss_pred HhcCC--CcEEEEEeCCC
Q 028002 162 DQLKP--GGRMVIPVGNI 177 (215)
Q Consensus 162 ~~Lk~--gG~lv~~~~~~ 177 (215)
+.|++ ||.+++.+++.
T Consensus 330 ~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 330 YAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHTSBSCEEEEEESCT
T ss_pred HHHhhCCCCEEEEEECCH
Confidence 55655 88888777653
No 233
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.32 E-value=3.4e-11 Score=99.51 Aligned_cols=122 Identities=12% Similarity=0.041 Sum_probs=93.1
Q ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCC-----------------------------------
Q 028002 48 TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGP----------------------------------- 92 (215)
Q Consensus 48 ~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~----------------------------------- 92 (215)
....+.+.+.++.... ..++..|+|.+||+|.+.+.++.....
T Consensus 176 Apl~e~LAaall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 253 (384)
T 3ldg_A 176 APIKENMAAAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADY 253 (384)
T ss_dssp CCCCHHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CCCcHHHHHHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhc
Confidence 3345555666666554 677899999999999999988876421
Q ss_pred --CCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEEEccCCCC----------chHHH
Q 028002 93 --QGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIHVGAAAPE----------IPQAL 160 (215)
Q Consensus 93 --~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~----------~~~~~ 160 (215)
..+++|+|+++.+++.|++++...+.. +.+++.++|+.+.... ..||+|++++++.. +...+
T Consensus 254 ~~~~~v~GvDid~~al~~Ar~Na~~~gl~-----~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~l 327 (384)
T 3ldg_A 254 DIQLDISGFDFDGRMVEIARKNAREVGLE-----DVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEM 327 (384)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTCT-----TTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHH
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCC-----CceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHH
Confidence 145999999999999999999987764 5799999999876554 68999999998632 22345
Q ss_pred HHhcCC--CcEEEEEeCCC
Q 028002 161 IDQLKP--GGRMVIPVGNI 177 (215)
Q Consensus 161 ~~~Lk~--gG~lv~~~~~~ 177 (215)
.+.||+ ||.+++.+++.
T Consensus 328 g~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 328 GETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp HHHHTTCTTSEEEEEESCT
T ss_pred HHHHhhCCCcEEEEEECCH
Confidence 556665 89888887764
No 234
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.31 E-value=1.7e-10 Score=87.14 Aligned_cols=111 Identities=21% Similarity=0.179 Sum_probs=80.5
Q ss_pred cchhHHHHHHHHHHHh-cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe
Q 028002 49 ISAPHMHATCLQLLEE-NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL 127 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v 127 (215)
.+.+.+...++..+.. ...++.+|||+|||+|.++..+++. +. .+++++|+++.+++.+++++...+ .++
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~-------~~~ 99 (207)
T 1wy7_A 29 RTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL-GA-KEVICVEVDKEAVDVLIENLGEFK-------GKF 99 (207)
T ss_dssp CCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHTGGGT-------TSE
T ss_pred cCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHHHHHcC-------CCE
Confidence 3444445555554431 1446789999999999999999887 43 589999999999999999876643 178
Q ss_pred EEEeCCCCCCCCCCCCccEEEEccCCCC--------chHHHHHhcCCCcEEEEE
Q 028002 128 SVHVGDGRKGWPEFAPYDAIHVGAAAPE--------IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 128 ~~~~~d~~~~~~~~~~~D~V~~~~~~~~--------~~~~~~~~Lk~gG~lv~~ 173 (215)
+++.+|+.+. + ++||+|++++++.. +++.+.+.+ ||.+++.
T Consensus 100 ~~~~~d~~~~-~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 100 KVFIGDVSEF-N--SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp EEEESCGGGC-C--CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EEEECchHHc-C--CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 9999998774 2 58999999988643 335566666 5544443
No 235
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.31 E-value=5.5e-12 Score=109.51 Aligned_cols=98 Identities=20% Similarity=0.223 Sum_probs=78.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC--CCCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG--WPEFAP 143 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~ 143 (215)
+..+.+|||+|||+|.++..++++ | .+|+|+|.++.+++.|+....+.+. .++++.++++.+. ....+.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~-g--a~V~giD~~~~~i~~a~~~a~~~~~------~~~~~~~~~~~~~~~~~~~~~ 134 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK-G--ATIVGIDFQQENINVCRALAEENPD------FAAEFRVGRIEEVIAALEEGE 134 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHTSTT------SEEEEEECCHHHHHHHCCTTS
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC-C--CEEEEECCCHHHHHHHHHHHHhcCC------CceEEEECCHHHHhhhccCCC
Confidence 455689999999999999999998 4 7899999999999999988776543 3789999998764 223378
Q ss_pred ccEEEEccCCCCchH--------HHHHhcCCCcEEEE
Q 028002 144 YDAIHVGAAAPEIPQ--------ALIDQLKPGGRMVI 172 (215)
Q Consensus 144 ~D~V~~~~~~~~~~~--------~~~~~Lk~gG~lv~ 172 (215)
||+|+|...++|+.+ .+.+.|+++|..++
T Consensus 135 fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 135 FDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp CSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred ccEEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 999999999988763 35566778776554
No 236
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.31 E-value=6.8e-12 Score=99.65 Aligned_cols=106 Identities=19% Similarity=0.111 Sum_probs=73.2
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE-eCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH-VGD 133 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~-~~d 133 (215)
+..+++.+. ...++.+|||+|||||.++..+++. +. .+|+++|+++.|++.+.++- .++... ..+
T Consensus 73 l~~~l~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga-~~V~aVDvs~~mL~~a~r~~-----------~rv~~~~~~n 138 (291)
T 3hp7_A 73 LEKALAVFN-LSVEDMITIDIGASTGGFTDVMLQN-GA-KLVYAVDVGTNQLVWKLRQD-----------DRVRSMEQYN 138 (291)
T ss_dssp HHHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEECSSSSCSCHHHHTC-----------TTEEEECSCC
T ss_pred HHHHHHhcC-CCccccEEEecCCCccHHHHHHHhC-CC-CEEEEEECCHHHHHHHHHhC-----------cccceecccC
Confidence 345555554 1235679999999999999999887 33 69999999999998854321 233222 223
Q ss_pred CCCCC---CCCCCccEEEEccCCCC---chHHHHHhcCCCcEEEEEe
Q 028002 134 GRKGW---PEFAPYDAIHVGAAAPE---IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 134 ~~~~~---~~~~~~D~V~~~~~~~~---~~~~~~~~Lk~gG~lv~~~ 174 (215)
+.... .+...||+|+++..+.. ++.++.++|+|||.+++.+
T Consensus 139 i~~l~~~~l~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 139 FRYAEPVDFTEGLPSFASIDVSFISLNLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp GGGCCGGGCTTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEEE
T ss_pred ceecchhhCCCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEEE
Confidence 22211 12135999999887654 5688999999999999974
No 237
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.30 E-value=6.9e-12 Score=97.19 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=83.6
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
.+.+..+|||+|||+|-++..++.. .+..+|+++|+++.+++.+++++..++. ...+...|.....+. ++|
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~-------~~~~~v~D~~~~~p~-~~~ 199 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNV-------PHRTNVADLLEDRLD-EPA 199 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTC-------CEEEEECCTTTSCCC-SCC
T ss_pred ccCCCceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCC-------CceEEEeeecccCCC-CCc
Confidence 4566789999999999999999876 4668999999999999999999988663 578899998877766 889
Q ss_pred cEEEEccCCCCchH-------HHHHhcCCCcEEEE
Q 028002 145 DAIHVGAAAPEIPQ-------ALIDQLKPGGRMVI 172 (215)
Q Consensus 145 D~V~~~~~~~~~~~-------~~~~~Lk~gG~lv~ 172 (215)
|++++.-.++++-+ ++...|+++|.++-
T Consensus 200 DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 200 DVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp SEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEE
T ss_pred chHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEe
Confidence 99999988876553 57889999998764
No 238
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.29 E-value=9.1e-12 Score=101.81 Aligned_cols=97 Identities=16% Similarity=0.165 Sum_probs=73.5
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++.. +..+++++|++ .++. +++....+. .++++++.+|+.+..+ +||
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~--~~~~~~~~~-----~~~v~~~~~d~~~~~p---~~D 249 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRA-EVVA--RHRLDAPDV-----AGRWKVVEGDFLREVP---HAD 249 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECH-HHHT--TCCCCCGGG-----TTSEEEEECCTTTCCC---CCS
T ss_pred ccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecCH-HHhh--cccccccCC-----CCCeEEEecCCCCCCC---CCc
Confidence 5667899999999999999999985 56789999994 4433 222222222 2579999999974433 899
Q ss_pred EEEEccCCCCch--------HHHHHhcCCCcEEEEEe
Q 028002 146 AIHVGAAAPEIP--------QALIDQLKPGGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~~~--------~~~~~~Lk~gG~lv~~~ 174 (215)
+|++...++++. +++.+.|||||+|++..
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999998886543 56889999999999854
No 239
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.29 E-value=2.9e-13 Score=113.24 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=72.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.|+++ +.. .....+...+........++||
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g---~~v~gvD~s~~~~~~a~~~----~~~----~~~~~~~~~~~~~l~~~~~~fD 173 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAG---VRHLGFEPSSGVAAKAREK----GIR----VRTDFFEKATADDVRRTEGPAN 173 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTT---CEEEEECCCHHHHHHHHTT----TCC----EECSCCSHHHHHHHHHHHCCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcC---CcEEEECCCHHHHHHHHHc----CCC----cceeeechhhHhhcccCCCCEE
Confidence 4678899999999999999999873 5999999999999998764 110 0000011111111111237899
Q ss_pred EEEEccCCCCch------HHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAPEIP------QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~~~~------~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++...++++. +++.++|||||++++.+++
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999999887754 6789999999999998764
No 240
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.29 E-value=7e-12 Score=94.04 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=73.5
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
.++.+.+. ..+++.+|||+|||+|..+..+++. .++|+++|+++.. . ..++.++++|+.
T Consensus 14 ~ei~~~~~-~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~------~~~v~~~~~D~~ 72 (191)
T 3dou_A 14 EFLLDRYR-VVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------E------IAGVRFIRCDIF 72 (191)
T ss_dssp HHHHHHHC-CSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------C------CTTCEEEECCTT
T ss_pred HHHHHHcC-CCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------c------CCCeEEEEcccc
Confidence 34444443 3578899999999999999999887 2899999999741 1 158899999987
Q ss_pred CCCC--------C---CCCccEEEEccCCC-----------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 136 KGWP--------E---FAPYDAIHVGAAAP-----------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 136 ~~~~--------~---~~~~D~V~~~~~~~-----------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+... . .++||+|+++.... .+++.+.++|||||.|++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 73 KETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp SSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 6431 0 03899999986432 1234568899999999986643
No 241
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.27 E-value=2.1e-11 Score=96.12 Aligned_cols=104 Identities=11% Similarity=0.001 Sum_probs=82.2
Q ss_pred Ccc-cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccC
Q 028002 46 NAT-ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKE 124 (215)
Q Consensus 46 ~~~-~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~ 124 (215)
|++ +..+.+...+++.+. ..++ +|||+|||+|.++..+++.. .+|+++|+|+.+++.+++++..
T Consensus 26 GQnfL~d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~--------- 90 (271)
T 3fut_A 26 GQNFLVSEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSG--------- 90 (271)
T ss_dssp SCCEECCHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTT---------
T ss_pred CccccCCHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCC---------
Confidence 553 457778889999886 7788 99999999999999999884 7899999999999999987642
Q ss_pred CCeEEEeCCCCCCCCCC-CCccEEEEccCCCCchHHHHHhc
Q 028002 125 GSLSVHVGDGRKGWPEF-APYDAIHVGAAAPEIPQALIDQL 164 (215)
Q Consensus 125 ~~v~~~~~d~~~~~~~~-~~~D~V~~~~~~~~~~~~~~~~L 164 (215)
.+++++++|+....... ..+|.|+++.+..-....+.++|
T Consensus 91 ~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~iss~il~~ll 131 (271)
T 3fut_A 91 LPVRLVFQDALLYPWEEVPQGSLLVANLPYHIATPLVTRLL 131 (271)
T ss_dssp SSEEEEESCGGGSCGGGSCTTEEEEEEECSSCCHHHHHHHH
T ss_pred CCEEEEECChhhCChhhccCccEEEecCcccccHHHHHHHh
Confidence 58999999998754321 36899999988765444444444
No 242
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.27 E-value=6.4e-11 Score=89.10 Aligned_cols=102 Identities=16% Similarity=0.163 Sum_probs=73.0
Q ss_pred HHHHHHHHHHh-cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC
Q 028002 54 MHATCLQLLEE-NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG 132 (215)
Q Consensus 54 ~~~~~l~~l~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~ 132 (215)
+...++..+.. ...++.+|||+|||+|.++..+++. +. .+++++|+++.+++.+++++. +++++.+
T Consensus 36 ~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~-----------~~~~~~~ 102 (200)
T 1ne2_A 36 TAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-GA-ESVTAFDIDPDAIETAKRNCG-----------GVNFMVA 102 (200)
T ss_dssp HHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-TB-SEEEEEESCHHHHHHHHHHCT-----------TSEEEEC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHhcC-----------CCEEEEC
Confidence 34444444321 1446789999999999999999886 32 579999999999999988642 6789999
Q ss_pred CCCCCCCCCCCccEEEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 133 DGRKGWPEFAPYDAIHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 133 d~~~~~~~~~~~D~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
|+... + ++||+|+++.++++. ++.+.+.+ |.+++.+
T Consensus 103 d~~~~-~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~ 146 (200)
T 1ne2_A 103 DVSEI-S--GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSIG 146 (200)
T ss_dssp CGGGC-C--CCEEEEEECCCC-------CHHHHHHHHHHE---EEEEEEE
T ss_pred cHHHC-C--CCeeEEEECCCchhccCchhHHHHHHHHHhc---CcEEEEE
Confidence 98774 2 689999999886543 34556666 4444443
No 243
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.27 E-value=7.1e-11 Score=88.81 Aligned_cols=98 Identities=14% Similarity=0.068 Sum_probs=76.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcc--cCcccCCCeEEEeCCCCCC------
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAA--APLLKEGSLSVHVGDGRKG------ 137 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~v~~~~~d~~~~------ 137 (215)
+.+..+|||+|| |+.++.+++. ++++|+++|.++...+.+++++...+. . ++++++.+|+...
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~-----~~I~~~~gda~~~~~wg~p 98 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANPPAEG-----TEVNIVWTDIGPTGDWGHP 98 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSCCCTT-----CEEEEEECCCSSBCGGGCB
T ss_pred hhCCCEEEEECc--hHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCC-----CceEEEEeCchhhhccccc
Confidence 345679999998 5777777764 248999999999999999999988764 3 6899999996543
Q ss_pred --------C----------CCCCCccEEEEccCCC-CchHHHHHhcCCCcEEEE
Q 028002 138 --------W----------PEFAPYDAIHVGAAAP-EIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 138 --------~----------~~~~~~D~V~~~~~~~-~~~~~~~~~Lk~gG~lv~ 172 (215)
+ ...++||+|+.++... .....+.++|+|||++++
T Consensus 99 ~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 99 VSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp SSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred ccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence 1 1236899999998753 334557799999999977
No 244
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.26 E-value=6.3e-11 Score=90.95 Aligned_cols=94 Identities=16% Similarity=0.047 Sum_probs=77.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.+..+|||+|||+|.++..+. +..+|+++|+|+.+++.+++++..++ .+..+..+|.....+. ++||+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g-------~~~~~~v~D~~~~~~~-~~~Dv 171 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD-------WDFTFALQDVLCAPPA-EAGDL 171 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT-------CEEEEEECCTTTSCCC-CBCSE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC-------CCceEEEeecccCCCC-CCcch
Confidence 557899999999999998877 34899999999999999999987655 4788999999877766 69999
Q ss_pred EEEccCCCCch-------HHHHHhcCCCcEEEE
Q 028002 147 IHVGAAAPEIP-------QALIDQLKPGGRMVI 172 (215)
Q Consensus 147 V~~~~~~~~~~-------~~~~~~Lk~gG~lv~ 172 (215)
|++.-.++++- -++...|+++|+++-
T Consensus 172 vLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 172 ALIFKLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp EEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred HHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 99987775543 267788999876553
No 245
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.26 E-value=1.1e-11 Score=102.48 Aligned_cols=104 Identities=12% Similarity=0.053 Sum_probs=83.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCC-eEEEeCCCCCCCC--CCCC
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGS-LSVHVGDGRKGWP--EFAP 143 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~-v~~~~~d~~~~~~--~~~~ 143 (215)
.++.+|||++||+|..++.+++..+...+|+++|+++.+++.+++|+..++.. ++ ++++.+|+..... ..+.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~-----~~~v~v~~~Da~~~l~~~~~~~ 125 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP-----EDRYEIHGMEANFFLRKEWGFG 125 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC-----GGGEEEECSCHHHHHHSCCSSC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC-----CceEEEEeCCHHHHHHHhhCCC
Confidence 56789999999999999999987432268999999999999999999988763 34 8999999755322 1257
Q ss_pred ccEEEEccCC--CCchHHHHHhcCCCcEEEEEeC
Q 028002 144 YDAIHVGAAA--PEIPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 144 ~D~V~~~~~~--~~~~~~~~~~Lk~gG~lv~~~~ 175 (215)
||+|++++.. ..+++.+.+.|++||+|++++.
T Consensus 126 fD~V~lDP~g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 126 FDYVDLDPFGTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcEEEECCCcCHHHHHHHHHHHhCCCCEEEEEec
Confidence 9999999832 2467788899999999988773
No 246
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.25 E-value=9.5e-12 Score=102.66 Aligned_cols=100 Identities=15% Similarity=0.094 Sum_probs=82.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh---------------cccCcccCCCeEEEeC
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS---------------AAAPLLKEGSLSVHVG 132 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~---------------~~~~~~~~~~v~~~~~ 132 (215)
++.+|||+|||+|..++.+++..+ ..+|+++|+++.+++.+++|+..+ +. .+++++++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl------~~i~v~~~ 119 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE------KTIVINHD 119 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS------SEEEEEES
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC------CceEEEcC
Confidence 578999999999999999999854 367999999999999999999887 43 34899999
Q ss_pred CCCCCCCC-CCCccEEEEccCCC--CchHHHHHhcCCCcEEEEEe
Q 028002 133 DGRKGWPE-FAPYDAIHVGAAAP--EIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 133 d~~~~~~~-~~~~D~V~~~~~~~--~~~~~~~~~Lk~gG~lv~~~ 174 (215)
|+...... .+.||+|+.++... .+++.+.+.|++||.+++++
T Consensus 120 Da~~~~~~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 120 DANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp CHHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cHHHHHHhccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 98653221 25799999887543 46688889999999988875
No 247
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.24 E-value=1.4e-11 Score=96.38 Aligned_cols=95 Identities=13% Similarity=0.103 Sum_probs=75.9
Q ss_pred CCcc-cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCccc
Q 028002 45 YNAT-ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLK 123 (215)
Q Consensus 45 ~~~~-~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~ 123 (215)
+|++ +..+.+...+++.+. ..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+++++..
T Consensus 7 ~GQnFL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~-------- 73 (255)
T 3tqs_A 7 FGQHFLHDSFVLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ-------- 73 (255)
T ss_dssp --CCEECCHHHHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT--------
T ss_pred CCcccccCHHHHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh--------
Confidence 3553 457778888998886 7888999999999999999999874 7999999999999999988754
Q ss_pred CCCeEEEeCCCCCCCCC----CCCccEEEEccCC
Q 028002 124 EGSLSVHVGDGRKGWPE----FAPYDAIHVGAAA 153 (215)
Q Consensus 124 ~~~v~~~~~d~~~~~~~----~~~~D~V~~~~~~ 153 (215)
..+++++++|+...... .++|| |+++.+.
T Consensus 74 ~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 74 QKNITIYQNDALQFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp CTTEEEEESCTTTCCGGGSCCSSCEE-EEEECCH
T ss_pred CCCcEEEEcchHhCCHHHhccCCCeE-EEecCCc
Confidence 15899999999875432 24687 7777665
No 248
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.23 E-value=1.2e-11 Score=101.64 Aligned_cols=93 Identities=22% Similarity=0.273 Sum_probs=70.6
Q ss_pred CCCCCEEEEEcCC------ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC
Q 028002 66 LKPGMHALDIGSG------TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP 139 (215)
Q Consensus 66 ~~~~~~vLdiG~G------~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 139 (215)
..++.+||||||| +|..+..+++...+..+|+++|+++.+. . ...+++++++|+.+...
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~-------~~~rI~fv~GDa~dlpf 278 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V-------DELRIRTIQGDQNDAEF 278 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G-------CBTTEEEEECCTTCHHH
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h-------cCCCcEEEEecccccch
Confidence 3456899999999 7777777777655668999999999972 0 11689999999876422
Q ss_pred C------CCCccEEEEccCCC-----CchHHHHHhcCCCcEEEEE
Q 028002 140 E------FAPYDAIHVGAAAP-----EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 140 ~------~~~~D~V~~~~~~~-----~~~~~~~~~Lk~gG~lv~~ 173 (215)
. .++||+|+++.... ..++++.++|||||++++.
T Consensus 279 ~~~l~~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhhcccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 2 37899999976431 1346788999999999995
No 249
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.22 E-value=1.6e-10 Score=90.80 Aligned_cols=115 Identities=22% Similarity=0.214 Sum_probs=79.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCc--cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGT--GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG 132 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~--G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~ 132 (215)
+.+.+..+.. ...-.+|||+|||+ +..+..+++...+..+|+++|.|+.|++.|++++.... ..++.++++
T Consensus 66 l~rav~~l~~-~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~------~~~~~~v~a 138 (277)
T 3giw_A 66 MNRAVAHLAK-EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP------EGRTAYVEA 138 (277)
T ss_dssp HHHHHHHHHH-TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS------SSEEEEEEC
T ss_pred HHHHHHHhcc-ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC------CCcEEEEEe
Confidence 3444444431 12236899999997 44455555554567899999999999999998875432 147999999
Q ss_pred CCCCCC---CC---CCCcc-----EEEEccCCCCch---------HHHHHhcCCCcEEEEEeCC
Q 028002 133 DGRKGW---PE---FAPYD-----AIHVGAAAPEIP---------QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 133 d~~~~~---~~---~~~~D-----~V~~~~~~~~~~---------~~~~~~Lk~gG~lv~~~~~ 176 (215)
|+.+.. .. .+.|| .|+++..++++. ..+.+.|+|||+|+++...
T Consensus 139 D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 139 DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 997631 10 13454 577888776543 4567789999999998543
No 250
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.21 E-value=3e-11 Score=91.82 Aligned_cols=93 Identities=16% Similarity=0.076 Sum_probs=70.3
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+. ...++.+|||+|||+|..+..++ .+++++|+++. ++.+..+|+.
T Consensus 56 ~~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------------~~~~~~~d~~ 107 (215)
T 2zfu_A 56 DRIARDLR-QRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------------DPRVTVCDMA 107 (215)
T ss_dssp HHHHHHHH-TSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------------STTEEESCTT
T ss_pred HHHHHHHh-ccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------------CceEEEeccc
Confidence 34556654 34667899999999999887662 68999999987 2356777877
Q ss_pred CCCCCCCCccEEEEccCCCC-----chHHHHHhcCCCcEEEEEeCC
Q 028002 136 KGWPEFAPYDAIHVGAAAPE-----IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~~-----~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
......++||+|++...+++ +++++.++|+|||.+++....
T Consensus 108 ~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 108 QVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp SCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred cCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 65444478999999888753 346788999999999997543
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.20 E-value=3.5e-13 Score=105.04 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=88.4
Q ss_pred cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeE
Q 028002 49 ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
...+.+...+++.+. ..++.+|||+|||+|.++..+++.. .+++++|+|+.+++.+++++.. ..+++
T Consensus 12 l~~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~--------~~~v~ 78 (245)
T 1yub_A 12 LTSEKVLNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKL--------NTRVT 78 (245)
T ss_dssp CCCTTTHHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTT--------CSEEE
T ss_pred CCCHHHHHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhcc--------CCceE
Confidence 445556788888775 6778899999999999999999884 7899999999999888766531 15789
Q ss_pred EEeCCCCCCCCC-CCCccEEEEccCCC-----------------Cch----HHHHHhcCCCcEEEEEeCCCc
Q 028002 129 VHVGDGRKGWPE-FAPYDAIHVGAAAP-----------------EIP----QALIDQLKPGGRMVIPVGNIF 178 (215)
Q Consensus 129 ~~~~d~~~~~~~-~~~~D~V~~~~~~~-----------------~~~----~~~~~~Lk~gG~lv~~~~~~~ 178 (215)
++.+|+.+.... .++| .|+++.+.. ..+ +.+.++|+|||.+.+.+....
T Consensus 79 ~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~~~ 149 (245)
T 1yub_A 79 LIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHTQV 149 (245)
T ss_dssp ECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTTTB
T ss_pred EEECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhheehe
Confidence 999999875433 2578 777765432 122 568899999999988765543
No 252
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.20 E-value=4.1e-11 Score=103.24 Aligned_cols=129 Identities=17% Similarity=0.194 Sum_probs=93.0
Q ss_pred CcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCC-----------------CCeEEEEecChHHHHH
Q 028002 46 NATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGP-----------------QGRAVGVEHIPELVVS 108 (215)
Q Consensus 46 ~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-----------------~~~v~~~D~s~~~~~~ 108 (215)
|.+.+.+.+...+++.+. ..++.+|+|.|||+|.+...+++.+.. ...++|+|+++.+++.
T Consensus 149 G~fyTP~~iv~~mv~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~l 226 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRL 226 (541)
T ss_dssp -CCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHH
Confidence 556555556666677665 667889999999999999988876521 1379999999999999
Q ss_pred HHHHHHhhcccCcccCCCeEEEeCCCCCCC-CCCCCccEEEEccCCCC--------------------chHHHHHhcCCC
Q 028002 109 SIQNIEKSAAAPLLKEGSLSVHVGDGRKGW-PEFAPYDAIHVGAAAPE--------------------IPQALIDQLKPG 167 (215)
Q Consensus 109 a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~V~~~~~~~~--------------------~~~~~~~~Lk~g 167 (215)
|+.++...+..... ...+.+.++|..... .....||+|++++++.. ++..+.+.|+||
T Consensus 227 A~~nl~l~gi~~~~-~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 305 (541)
T 2ar0_A 227 ALMNCLLHDIEGNL-DHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG 305 (541)
T ss_dssp HHHHHHTTTCCCBG-GGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHhCCCccc-cccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC
Confidence 99988765542000 012678888876532 22368999999987632 446678999999
Q ss_pred cEEEEEeCCC
Q 028002 168 GRMVIPVGNI 177 (215)
Q Consensus 168 G~lv~~~~~~ 177 (215)
|++.+.+|++
T Consensus 306 Gr~a~V~p~~ 315 (541)
T 2ar0_A 306 GRAAVVVPDN 315 (541)
T ss_dssp EEEEEEEEHH
T ss_pred CEEEEEecCc
Confidence 9999877653
No 253
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=7.3e-11 Score=94.74 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=69.8
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEec----ChHHHHHHHHHHHhhcccCcccCCCeEEEeC-CCCCCCC
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEH----IPELVVSSIQNIEKSAAAPLLKEGSLSVHVG-DGRKGWP 139 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~----s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~ 139 (215)
.++++.+|||+|||+|..+..+++. ++|+++|+ ++.+++... .. ....+++.++.+ |+....
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~------~~~~~~v~~~~~~D~~~l~- 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MS------TYGWNLVRLQSGVDVFFIP- 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CC------STTGGGEEEECSCCTTTSC-
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hh------hcCCCCeEEEeccccccCC-
Confidence 3577899999999999999999876 47999999 554332110 00 011257889988 776542
Q ss_pred CCCCccEEEEccCCC------------CchHHHHHhcCCCcEEEEEeCCC
Q 028002 140 EFAPYDAIHVGAAAP------------EIPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 140 ~~~~~D~V~~~~~~~------------~~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
.++||+|+++.... ..+..+.++|||||.|++.+...
T Consensus 146 -~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 -PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp -CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred -cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 26899999987653 12345679999999999966543
No 254
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.17 E-value=3.4e-10 Score=88.00 Aligned_cols=115 Identities=14% Similarity=0.050 Sum_probs=84.1
Q ss_pred cchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeE
Q 028002 49 ISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 49 ~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
...+.+...+++.+. ..++.+|||+|||+|.++..+++.. .+++++|+|+.+++.+++++... .+++
T Consensus 13 l~d~~~~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~--------~~v~ 79 (244)
T 1qam_A 13 ITSKHNIDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDH--------DNFQ 79 (244)
T ss_dssp CCCHHHHHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTC--------CSEE
T ss_pred cCCHHHHHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccC--------CCeE
Confidence 455666777777665 6678999999999999999999984 79999999999999999876431 5899
Q ss_pred EEeCCCCCCCCC-CCCccEEEEccCCC-----------------Cch----HHHHHhcCCCcEEEEEeCCC
Q 028002 129 VHVGDGRKGWPE-FAPYDAIHVGAAAP-----------------EIP----QALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 129 ~~~~d~~~~~~~-~~~~D~V~~~~~~~-----------------~~~----~~~~~~Lk~gG~lv~~~~~~ 177 (215)
++.+|+...... ...| .|+++.+.. .+. +.+.++++++|.+.+.....
T Consensus 80 ~~~~D~~~~~~~~~~~~-~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~~ 149 (244)
T 1qam_A 80 VLNKDILQFKFPKNQSY-KIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLALFLMAE 149 (244)
T ss_dssp EECCCGGGCCCCSSCCC-EEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHHHHHTTT
T ss_pred EEEChHHhCCcccCCCe-EEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchhHHhhhh
Confidence 999998875443 2345 566654431 111 34778888888776654443
No 255
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.17 E-value=5.8e-11 Score=97.89 Aligned_cols=91 Identities=18% Similarity=0.239 Sum_probs=74.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..+++++.+|+....+ . ||
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~~~~--~-~D 269 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------------LSGIEHVGGDMFASVP--Q-GD 269 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTTCCC--C-EE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------------cCCCEEEeCCcccCCC--C-CC
Confidence 3557899999999999999999985 6678999999 888876643 1479999999877332 3 99
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEE
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIP 173 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~ 173 (215)
+|++...++++ ++++.+.|+|||+|++.
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999888654 35688999999999986
No 256
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.17 E-value=1.2e-10 Score=95.69 Aligned_cols=92 Identities=22% Similarity=0.242 Sum_probs=74.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..+..+|||+|||+|..+..+++.. |..+++++|+ +.+++.+++ ..+++++.+|+.+..+. . |
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~D~~~~~p~--~-D 261 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ------------FPGVTHVGGDMFKEVPS--G-D 261 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTTCCCC--C-S
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh------------cCCeEEEeCCcCCCCCC--C-C
Confidence 4456899999999999999999985 6679999999 777766542 15899999998874442 3 9
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
+|++...++++ ++++.+.|+|||+|++..
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999888754 456889999999999853
No 257
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.16 E-value=2.5e-10 Score=93.45 Aligned_cols=99 Identities=20% Similarity=0.221 Sum_probs=79.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..+..+|+|+|||+|..+..+++.. |..+++..|. +.+++.+++++.... .++++++.+|+..... ..+|
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~------~~rv~~~~gD~~~~~~--~~~D 246 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQE------EEQIDFQEGDFFKDPL--PEAD 246 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--------CCSEEEEESCTTTSCC--CCCS
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcc------cCceeeecCccccCCC--CCce
Confidence 3456799999999999999999995 7788999997 788999988765432 2689999999876533 3589
Q ss_pred EEEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
+|++...++++ ++++.+.|+|||++++.-
T Consensus 247 ~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 247 LYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEE
Confidence 99999888754 356788999999998853
No 258
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.16 E-value=8.7e-11 Score=96.74 Aligned_cols=91 Identities=19% Similarity=0.273 Sum_probs=73.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.+..+|||+|||+|..+..+++.. |..+++++|+ +.+++.+++ ..+++++.+|+.+..+. . |+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~~~p~--~-D~ 264 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA------------FSGVEHLGGDMFDGVPK--G-DA 264 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTTCCCC--C-SE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh------------cCCCEEEecCCCCCCCC--C-CE
Confidence 456899999999999999999985 6689999999 877766542 15899999998874443 3 99
Q ss_pred EEEccCCCCc--------hHHHHHhcCCCcEEEEEe
Q 028002 147 IHVGAAAPEI--------PQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 147 V~~~~~~~~~--------~~~~~~~Lk~gG~lv~~~ 174 (215)
|++...++++ ++++.+.|+|||+|++..
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999888744 456889999999999853
No 259
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.16 E-value=2e-11 Score=96.05 Aligned_cols=108 Identities=15% Similarity=-0.011 Sum_probs=72.7
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE--eCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH--VGD 133 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~--~~d 133 (215)
..+++. ..+.++.+|||+|||+|..+..+++. ++|+++|+++ +...+++. .........++.++ ++|
T Consensus 64 ~~i~~~--~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~----~~~~~~~~~~v~~~~~~~D 132 (265)
T 2oxt_A 64 AWMEER--GYVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEV----PRITESYGWNIVKFKSRVD 132 (265)
T ss_dssp HHHHHH--TSCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCC----CCCCCBTTGGGEEEECSCC
T ss_pred HHHHHc--CCCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhh----hhhhhccCCCeEEEecccC
Confidence 444444 23678899999999999999998875 5899999998 43222110 00000000167888 888
Q ss_pred CCCCCCCCCCccEEEEccCCC------------CchHHHHHhcCCCc--EEEEEeCC
Q 028002 134 GRKGWPEFAPYDAIHVGAAAP------------EIPQALIDQLKPGG--RMVIPVGN 176 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~------------~~~~~~~~~Lk~gG--~lv~~~~~ 176 (215)
+.... .++||+|+++.... .+++.+.++|+||| .+++.+..
T Consensus 133 ~~~l~--~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 133 IHTLP--VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp TTTSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HhHCC--CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 87643 37899999986511 13456779999999 99986543
No 260
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.14 E-value=2.1e-11 Score=96.53 Aligned_cols=100 Identities=15% Similarity=0.020 Sum_probs=69.3
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE--eCCCCCCCCCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH--VGDGRKGWPEFAP 143 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~ 143 (215)
+.++.+|||+|||+|..+..+++. ++|+++|+++ +...+++. .........++.++ ++|+.... .++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~----~~~~~~~~~~v~~~~~~~D~~~l~--~~~ 148 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEK----PRLVETFGWNLITFKSKVDVTKME--PFQ 148 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCC----CCCCCCTTGGGEEEECSCCGGGCC--CCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhc----hhhhhhcCCCeEEEeccCcHhhCC--CCC
Confidence 567889999999999999999876 5899999998 43322111 10000000168888 88887643 378
Q ss_pred ccEEEEccCCC------------CchHHHHHhcCCCc--EEEEEeCC
Q 028002 144 YDAIHVGAAAP------------EIPQALIDQLKPGG--RMVIPVGN 176 (215)
Q Consensus 144 ~D~V~~~~~~~------------~~~~~~~~~Lk~gG--~lv~~~~~ 176 (215)
||+|+++.... .+++.+.++||||| .+++.+..
T Consensus 149 fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 149 ADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred cCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 99999986511 13456778999999 99886543
No 261
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.14 E-value=1.1e-10 Score=92.87 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=67.4
Q ss_pred CCCCCEEEEEcC------CccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEE-EeCCCCCCC
Q 028002 66 LKPGMHALDIGS------GTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSV-HVGDGRKGW 138 (215)
Q Consensus 66 ~~~~~~vLdiG~------G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~-~~~d~~~~~ 138 (215)
++++.+|||+|| |+|. ..+++..++.++|+++|+++. . .++++ +++|+.+..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v------~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V------SDADSTLIGDCATVH 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B------CSSSEEEESCGGGCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C------CCCEEEEECccccCC
Confidence 678899999999 4466 555666555689999999997 1 35778 999987754
Q ss_pred CCCCCccEEEEccCCC-----------------CchHHHHHhcCCCcEEEEEeCC
Q 028002 139 PEFAPYDAIHVGAAAP-----------------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~-----------------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.. ++||+|+++...+ .+++.+.++|||||.|++.+..
T Consensus 120 ~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 120 TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 43 6899999975321 2456788999999999996643
No 262
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.14 E-value=1.1e-10 Score=95.47 Aligned_cols=111 Identities=22% Similarity=0.246 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~ 144 (215)
.++|.+|||+++|.|+-+..++.. +..+.++++|+++..++..++++...+........++.+...|...... ..+.|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~-~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHT-TCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCEEEEecCCccHHHHHHHHh-cCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 888999999999999999999987 4557899999999999999999987665322223578888888765321 23689
Q ss_pred cEEEEccCCCC------------------------------chHHHHHhcCCCcEEEEEeCCC
Q 028002 145 DAIHVGAAAPE------------------------------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 145 D~V~~~~~~~~------------------------------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
|.|+++.++.. ++..+.++|||||+|++++++.
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 99999887532 1134678899999999998774
No 263
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.14 E-value=2.1e-11 Score=99.15 Aligned_cols=107 Identities=19% Similarity=0.233 Sum_probs=79.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccC---CCeEEEeCCCCCCCC----C
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKE---GSLSVHVGDGRKGWP----E 140 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~----~ 140 (215)
.+.+||++|||+|..+..+++. ++ .+++++|+++.+++.|++++...... .+.. ++++++.+|+..... .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~~-~~Vt~VEID~~vie~Ar~~~~~l~~~-~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRKTCGD-VLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC-----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHhccc-cccccCCCcEEEEECcHHHHHHhhhcc
Confidence 4579999999999999999887 45 78999999999999999987532100 0111 379999999877543 2
Q ss_pred CCCccEEEEccCC-C-----------CchHHH----HHhcCCCcEEEEEeCCC
Q 028002 141 FAPYDAIHVGAAA-P-----------EIPQAL----IDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 141 ~~~~D~V~~~~~~-~-----------~~~~~~----~~~Lk~gG~lv~~~~~~ 177 (215)
.++||+|+++.+. + .+.+.+ .++|+|||++++..++.
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 3689999998753 1 122344 78999999999976553
No 264
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.13 E-value=1.2e-10 Score=95.31 Aligned_cols=92 Identities=17% Similarity=0.215 Sum_probs=74.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..+..+|||+|||+|..+..+++.. |..+++++|+ +.+++.+++ . .+++++.+|+.+..+ .||
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~------~~v~~~~~d~~~~~p---~~D 248 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG------S------NNLTYVGGDMFTSIP---NAD 248 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------B------TTEEEEECCTTTCCC---CCS
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc------C------CCcEEEeccccCCCC---Ccc
Confidence 4566899999999999999999885 5579999999 888877653 1 469999999876333 399
Q ss_pred EEEEccCCCCc--------hHHHHHhcCC---CcEEEEEe
Q 028002 146 AIHVGAAAPEI--------PQALIDQLKP---GGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~~--------~~~~~~~Lk~---gG~lv~~~ 174 (215)
+|++...++++ ++++.+.||| ||++++..
T Consensus 249 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 249 AVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred EEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 99999888654 3567899999 99998864
No 265
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.11 E-value=3.1e-10 Score=89.85 Aligned_cols=109 Identities=17% Similarity=0.107 Sum_probs=79.2
Q ss_pred CCc-ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCC-CCeEEEEecChHHHHHHHHHHHhhcccCcc
Q 028002 45 YNA-TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGP-QGRAVGVEHIPELVVSSIQNIEKSAAAPLL 122 (215)
Q Consensus 45 ~~~-~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 122 (215)
+|+ ++..+.+...+++.+. ..++.+|||+|||+|.++..+++.... .++|+++|+|+.+++.++++. .
T Consensus 20 ~GQ~fL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~------- 89 (279)
T 3uzu_A 20 FGQNFLVDHGVIDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G------- 89 (279)
T ss_dssp CSCCEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G-------
T ss_pred CCccccCCHHHHHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C-------
Confidence 355 3567778888888886 778899999999999999999998632 134999999999999999873 1
Q ss_pred cCCCeEEEeCCCCCCCCCC----C--CccEEEEccCCCCchHHHHHhcC
Q 028002 123 KEGSLSVHVGDGRKGWPEF----A--PYDAIHVGAAAPEIPQALIDQLK 165 (215)
Q Consensus 123 ~~~~v~~~~~d~~~~~~~~----~--~~D~V~~~~~~~~~~~~~~~~Lk 165 (215)
.+++++++|+....... . ..+.|+++.++.-.-.-+.++|.
T Consensus 90 --~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~iss~il~~ll~ 136 (279)
T 3uzu_A 90 --ELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLLFHLMS 136 (279)
T ss_dssp --GGEEEEESCGGGCCGGGGSCSSSSCCEEEEEECCHHHHHHHHHHHGG
T ss_pred --CCcEEEECChhcCChhHhcccccCCceEEEEccCccccHHHHHHHHh
Confidence 58999999987654321 0 23467777665332233445554
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.10 E-value=2.1e-09 Score=95.34 Aligned_cols=125 Identities=14% Similarity=0.119 Sum_probs=93.3
Q ss_pred CcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhC----------------------------------
Q 028002 46 NATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVG---------------------------------- 91 (215)
Q Consensus 46 ~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---------------------------------- 91 (215)
+.....+.+.+.++.... ..++..|||.+||+|.+.+.++....
T Consensus 170 ~~apl~e~LAa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~ 247 (703)
T 3v97_A 170 GIAPIKETLAAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTR 247 (703)
T ss_dssp CCCSSCHHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHH
Confidence 334455566666666654 67788999999999999998876531
Q ss_pred -------CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC--CCCccEEEEccCCCC-------
Q 028002 92 -------PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE--FAPYDAIHVGAAAPE------- 155 (215)
Q Consensus 92 -------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~D~V~~~~~~~~------- 155 (215)
+..+++|+|+++.+++.|++++...++. +.+++.++|+.+...+ .+.||+|++++++-.
T Consensus 248 ~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~-----~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~ 322 (703)
T 3v97_A 248 ARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIG-----ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPA 322 (703)
T ss_dssp HHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCG-----GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHH
T ss_pred hhhccccCCccEEEEECCHHHHHHHHHHHHHcCCC-----CceEEEECChhhCccccccCCCCEEEeCCCccccccchhH
Confidence 1247999999999999999999988775 4689999998875332 238999999998732
Q ss_pred ---chH---HHHHhcCCCcEEEEEeCCC
Q 028002 156 ---IPQ---ALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 156 ---~~~---~~~~~Lk~gG~lv~~~~~~ 177 (215)
+.. ...+.+.|||.+++.+++.
T Consensus 323 l~~ly~~l~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 323 LIALHSLLGRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHHHHHHHHHhhCCCCeEEEEeCCH
Confidence 112 2345567899999988763
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.10 E-value=2.3e-10 Score=91.52 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe
Q 028002 52 PHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV 131 (215)
Q Consensus 52 ~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~ 131 (215)
|.+...+++.+. +.++.+|||+|||+|..+..+++.++ ..+|+++|.|+.+++.|++++...+ .++++++
T Consensus 12 pvLl~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-------~~v~~v~ 81 (301)
T 1m6y_A 12 PVMVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-------DRVSLFK 81 (301)
T ss_dssp CTTHHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-------TTEEEEE
T ss_pred HHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEE
Confidence 335678888886 77889999999999999999999863 5799999999999999999886643 4899999
Q ss_pred CCCCCCC---C--CCCCccEEEEccCCC
Q 028002 132 GDGRKGW---P--EFAPYDAIHVGAAAP 154 (215)
Q Consensus 132 ~d~~~~~---~--~~~~~D~V~~~~~~~ 154 (215)
+|+.... . ...+||.|+++.+..
T Consensus 82 ~d~~~l~~~l~~~g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 82 VSYREADFLLKTLGIEKVDGILMDLGVS 109 (301)
T ss_dssp CCGGGHHHHHHHTTCSCEEEEEEECSCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEcCccc
Confidence 9976532 1 114799999887653
No 268
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.08 E-value=2.3e-10 Score=98.56 Aligned_cols=124 Identities=15% Similarity=0.074 Sum_probs=89.8
Q ss_pred CcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCC--------------CCeEEEEecChHHHHHHHH
Q 028002 46 NATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGP--------------QGRAVGVEHIPELVVSSIQ 111 (215)
Q Consensus 46 ~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~--------------~~~v~~~D~s~~~~~~a~~ 111 (215)
|.+.+.+.+...|++.+. ..++ +|+|.+||+|.+...+++.+.. ...++|+|+++.++..|+.
T Consensus 225 G~fyTP~~Vv~lmv~ll~--p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLE--PYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp TTTCCCHHHHHHHHHHHC--CCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred CeEeCCHHHHHHHHHHHh--cCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 556666667777777765 4444 9999999999998887654310 2579999999999999999
Q ss_pred HHHhhcccCcccCCCeEEEeCCCCCCC-CCCCCccEEEEccCCCC-----------------------------------
Q 028002 112 NIEKSAAAPLLKEGSLSVHVGDGRKGW-PEFAPYDAIHVGAAAPE----------------------------------- 155 (215)
Q Consensus 112 ~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~V~~~~~~~~----------------------------------- 155 (215)
++...+.. .++.+.++|..... .....||+|++++++..
T Consensus 302 Nl~l~gi~-----~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~ 376 (544)
T 3khk_A 302 NMVIRGID-----FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFA 376 (544)
T ss_dssp HHHHTTCC-----CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHH
T ss_pred HHHHhCCC-----cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHH
Confidence 88776643 23444677765432 23368999999987642
Q ss_pred chHHHHHhcCCCcEEEEEeCCC
Q 028002 156 IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 156 ~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
++..+.+.|+|||++.+.+|++
T Consensus 377 Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 377 WMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp HHHHHHHTEEEEEEEEEEEETH
T ss_pred HHHHHHHHhccCceEEEEecch
Confidence 2356789999999998877653
No 269
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.07 E-value=2.3e-09 Score=92.21 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=95.2
Q ss_pred CcccchhHHHHHHHHHHHhc--CCCCCEEEEEcCCccHHHHHHHHHhC--CCCeEEEEecChHHHHHHHHHHHhhcccCc
Q 028002 46 NATISAPHMHATCLQLLEEN--LKPGMHALDIGSGTGYLTACFALMVG--PQGRAVGVEHIPELVVSSIQNIEKSAAAPL 121 (215)
Q Consensus 46 ~~~~~~~~~~~~~l~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 121 (215)
|.+.+.+.+...|.+.+... ..++.+|+|.+||+|.+...+++.+. ....++|+|+++.+...|+.++...+.
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi--- 273 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV--- 273 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC---
T ss_pred CeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC---
Confidence 55666666667777766522 23678999999999999998888752 236899999999999999998876553
Q ss_pred ccCCCeEEEeCCCCCC-CC--CCCCccEEEEccCCCC-----------------------------chHHHHHhcC-CCc
Q 028002 122 LKEGSLSVHVGDGRKG-WP--EFAPYDAIHVGAAAPE-----------------------------IPQALIDQLK-PGG 168 (215)
Q Consensus 122 ~~~~~v~~~~~d~~~~-~~--~~~~~D~V~~~~~~~~-----------------------------~~~~~~~~Lk-~gG 168 (215)
...++.+.++|.... ++ ....||+|++++++.. ++..+.+.|+ +||
T Consensus 274 -~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gG 352 (542)
T 3lkd_A 274 -PIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNG 352 (542)
T ss_dssp -CGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTC
T ss_pred -CcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCce
Confidence 224678999997754 22 2368999999987510 2345778999 999
Q ss_pred EEEEEeCCC
Q 028002 169 RMVIPVGNI 177 (215)
Q Consensus 169 ~lv~~~~~~ 177 (215)
++.+.+|++
T Consensus 353 r~a~VlP~g 361 (542)
T 3lkd_A 353 VMAIVLPHG 361 (542)
T ss_dssp EEEEEEETH
T ss_pred eEEEEecch
Confidence 998877764
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.06 E-value=4.7e-10 Score=87.48 Aligned_cols=107 Identities=14% Similarity=0.057 Sum_probs=78.6
Q ss_pred CCc-ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCccc
Q 028002 45 YNA-TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLK 123 (215)
Q Consensus 45 ~~~-~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~ 123 (215)
+|+ ++..+.+...+++.+. ..++.+|||+|||+|.++..+++. + ..+++++|+|+.+++.++++ .
T Consensus 9 ~GQnfl~d~~i~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~-~--------- 74 (249)
T 3ftd_A 9 FGQHLLVSEGVLKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI-G--------- 74 (249)
T ss_dssp CCSSCEECHHHHHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS-C---------
T ss_pred ccccccCCHHHHHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc-c---------
Confidence 355 3456778888888876 778899999999999999999886 3 27999999999999999765 1
Q ss_pred CCCeEEEeCCCCCCCCCC-CCccEEEEccCCCCchHHHHHhcC
Q 028002 124 EGSLSVHVGDGRKGWPEF-APYDAIHVGAAAPEIPQALIDQLK 165 (215)
Q Consensus 124 ~~~v~~~~~d~~~~~~~~-~~~D~V~~~~~~~~~~~~~~~~Lk 165 (215)
..+++++++|+....... .....|+++.+..-....+.++|.
T Consensus 75 ~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy~i~~~il~~ll~ 117 (249)
T 3ftd_A 75 DERLEVINEDASKFPFCSLGKELKVVGNLPYNVASLIIENTVY 117 (249)
T ss_dssp CTTEEEECSCTTTCCGGGSCSSEEEEEECCTTTHHHHHHHHHH
T ss_pred CCCeEEEEcchhhCChhHccCCcEEEEECchhccHHHHHHHHh
Confidence 158999999998754321 112377777777543344444443
No 271
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.04 E-value=2.7e-09 Score=84.56 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=84.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
+...+||-||.|.|..+..+++.. +..+++.+|+++.+++.+++.+..... ..+..++++++.+|+..... ..++||
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~-~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccc-cccCCCcEEEEechHHHHHhhccccCC
Confidence 345799999999999999999873 447999999999999999998754221 11344799999999987654 336899
Q ss_pred EEEEccCC----------CCchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAA----------PEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~----------~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+.+..- ..+.+.+.+.|+|||+++.-.++
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 99988643 23557899999999999986543
No 272
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.02 E-value=1.2e-10 Score=91.31 Aligned_cols=81 Identities=19% Similarity=0.253 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecCh-------HHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIP-------ELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW 138 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~-------~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 138 (215)
..++.+|||+|||+|..+..+++. + .+|+++|+++ .+++.+++++..++.. .+++++++|..+..
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~-g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~-----~ri~~~~~d~~~~l 152 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL-G--LTVTAFEQHPAVACLLSDGIRRALLNPETQDTA-----ARINLHFGNAAEQM 152 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT-T--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH-----TTEEEEESCHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh-C--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc-----cCeEEEECCHHHHH
Confidence 456789999999999999999987 3 6899999999 9999998887766543 45999999987643
Q ss_pred C--CC--CCccEEEEccCCC
Q 028002 139 P--EF--APYDAIHVGAAAP 154 (215)
Q Consensus 139 ~--~~--~~~D~V~~~~~~~ 154 (215)
. .. ++||+|+++++++
T Consensus 153 ~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 153 PALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHCCCSEEEECCCC-
T ss_pred HhhhccCCCccEEEECCCCC
Confidence 2 11 5799999998664
No 273
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.02 E-value=1.1e-10 Score=85.99 Aligned_cols=83 Identities=17% Similarity=0.167 Sum_probs=66.6
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC---CCC
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP---EFA 142 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~ 142 (215)
++++.+|||+|||. +++|+|+.|++.|++++. .++++..+|+..... ..+
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~----------~~~~~~~~d~~~~~~~~~~~~ 62 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG----------NEGRVSVENIKQLLQSAHKES 62 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT----------TTSEEEEEEGGGGGGGCCCSS
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc----------cCcEEEEechhcCccccCCCC
Confidence 78899999999985 128999999999988753 247888888876543 447
Q ss_pred CccEEEEccCCCCc-------hHHHHHhcCCCcEEEEEeC
Q 028002 143 PYDAIHVGAAAPEI-------PQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 143 ~~D~V~~~~~~~~~-------~~~~~~~Lk~gG~lv~~~~ 175 (215)
+||+|++...++++ ++++.++|||||++++..+
T Consensus 63 ~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp CEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 89999998877765 4688999999999999543
No 274
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.01 E-value=5.4e-10 Score=91.60 Aligned_cols=91 Identities=20% Similarity=0.250 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..+++++.+|+....+ .||+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~~~~---~~D~ 254 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG------------NENLNFVGGDMFKSIP---SADA 254 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC------------CSSEEEEECCTTTCCC---CCSE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc------------CCCcEEEeCccCCCCC---CceE
Confidence 456899999999999999999985 6678999999 677765542 1469999999877322 4999
Q ss_pred EEEccCCCCc--------hHHHHHhcCC---CcEEEEEe
Q 028002 147 IHVGAAAPEI--------PQALIDQLKP---GGRMVIPV 174 (215)
Q Consensus 147 V~~~~~~~~~--------~~~~~~~Lk~---gG~lv~~~ 174 (215)
|++...++++ ++++.+.|+| ||++++..
T Consensus 255 v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 255 VLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 9999887654 3567899999 99998853
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.99 E-value=4.1e-10 Score=87.93 Aligned_cols=93 Identities=11% Similarity=-0.019 Sum_probs=70.1
Q ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe
Q 028002 48 TISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL 127 (215)
Q Consensus 48 ~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v 127 (215)
++..+.+...+++.+. ..++.+|||+|||+|.++. +. . +...+|+++|+++.+++.+++++... .++
T Consensus 3 fL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~--------~~v 69 (252)
T 1qyr_A 3 FLNDQFVIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG--------PKL 69 (252)
T ss_dssp EECCHHHHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG--------GGE
T ss_pred CcCCHHHHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC--------Cce
Confidence 3456777888888886 7788999999999999999 64 4 32233999999999999998765431 479
Q ss_pred EEEeCCCCCCCCCC-----CCccEEEEccCC
Q 028002 128 SVHVGDGRKGWPEF-----APYDAIHVGAAA 153 (215)
Q Consensus 128 ~~~~~d~~~~~~~~-----~~~D~V~~~~~~ 153 (215)
+++++|+....... +..|.|+++.+.
T Consensus 70 ~~i~~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 70 TIYQQDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp EEECSCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred EEEECchhhCCHHHhhcccCCceEEEECCCC
Confidence 99999987743210 234688888775
No 276
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.99 E-value=3.2e-09 Score=93.83 Aligned_cols=130 Identities=8% Similarity=0.007 Sum_probs=85.4
Q ss_pred CcccchhHHHHHHHHH----HHhcCCCCCEEEEEcCCccHHHHHHHHHhCC--CCeEEEEecChHHHHHHHHHHH--hhc
Q 028002 46 NATISAPHMHATCLQL----LEENLKPGMHALDIGSGTGYLTACFALMVGP--QGRAVGVEHIPELVVSSIQNIE--KSA 117 (215)
Q Consensus 46 ~~~~~~~~~~~~~l~~----l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~--~~~v~~~D~s~~~~~~a~~~~~--~~~ 117 (215)
|.+.+.+.+...++.. +.....++.+|||.|||+|.+...+++.++. ..+++|+|+++.+++.|+.+.. .+.
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 5555666666666655 2212345789999999999999999987631 2579999999999999943332 211
Q ss_pred ccCcccCCCeEEEeCCCCCCC-CCCCCccEEEEccCCCC-----------------------------------chHHHH
Q 028002 118 AAPLLKEGSLSVHVGDGRKGW-PEFAPYDAIHVGAAAPE-----------------------------------IPQALI 161 (215)
Q Consensus 118 ~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~V~~~~~~~~-----------------------------------~~~~~~ 161 (215)
... +.....+...|..... .....||+|++++++-. ++..+.
T Consensus 375 Llh--Gi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al 452 (878)
T 3s1s_A 375 LVS--SNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVT 452 (878)
T ss_dssp TCB--TTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHH
T ss_pred hhc--CCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHH
Confidence 111 1122345555554421 12368999999998721 123467
Q ss_pred HhcCCCcEEEEEeCCC
Q 028002 162 DQLKPGGRMVIPVGNI 177 (215)
Q Consensus 162 ~~Lk~gG~lv~~~~~~ 177 (215)
++|++||++.+.+|+.
T Consensus 453 ~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 453 ELVQDGTVISAIMPKQ 468 (878)
T ss_dssp HHSCTTCEEEEEEETH
T ss_pred HhcCCCcEEEEEEChH
Confidence 8899999999988764
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.98 E-value=8e-10 Score=91.63 Aligned_cols=79 Identities=20% Similarity=0.226 Sum_probs=66.0
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh--cccCcccCCCeEEEeCCCCCCCCC--C
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS--AAAPLLKEGSLSVHVGDGRKGWPE--F 141 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~v~~~~~d~~~~~~~--~ 141 (215)
+.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++++... +. .+++++++|+.+.... .
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl------~~i~~i~~Da~~~L~~~~~ 161 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEG------KDVNILTGDFKEYLPLIKT 161 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTT------CEEEEEESCGGGSHHHHHH
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCC------CcEEEEECcHHHhhhhccC
Confidence 4458999999999999999998763 79999999999999999999876 43 5899999998875322 2
Q ss_pred CCccEEEEccCC
Q 028002 142 APYDAIHVGAAA 153 (215)
Q Consensus 142 ~~~D~V~~~~~~ 153 (215)
++||+|+++++.
T Consensus 162 ~~fDvV~lDPPr 173 (410)
T 3ll7_A 162 FHPDYIYVDPAR 173 (410)
T ss_dssp HCCSEEEECCEE
T ss_pred CCceEEEECCCC
Confidence 589999998754
No 278
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.86 E-value=4.5e-09 Score=82.17 Aligned_cols=87 Identities=14% Similarity=0.128 Sum_probs=64.2
Q ss_pred CCCC--CEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCccc--C-CCeEEEeCCCCCCCCC
Q 028002 66 LKPG--MHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLK--E-GSLSVHVGDGRKGWPE 140 (215)
Q Consensus 66 ~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~--~-~~v~~~~~d~~~~~~~ 140 (215)
+.++ .+|||+|||+|..+..+++. + .+|+++|.++.+.+.+++++.......... . .+++++++|..+....
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~-g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV-G--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH-T--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 4566 89999999999999999998 3 689999999998888877765432100000 0 4789999998654321
Q ss_pred -CCCccEEEEccCCCC
Q 028002 141 -FAPYDAIHVGAAAPE 155 (215)
Q Consensus 141 -~~~~D~V~~~~~~~~ 155 (215)
.+.||+|+++++++.
T Consensus 161 ~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 161 ITPRPQVVYLDPMFPH 176 (258)
T ss_dssp CSSCCSEEEECCCCCC
T ss_pred CcccCCEEEEcCCCCC
Confidence 147999999987754
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.78 E-value=1.1e-08 Score=89.03 Aligned_cols=95 Identities=20% Similarity=0.168 Sum_probs=69.5
Q ss_pred CEEEEEcCCccHHHHHHHHH---hCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 70 MHALDIGSGTGYLTACFALM---VGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~---~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
..|+|+|||+|.++...++. .+-..+|+++|.++ +...+++..+.++.. ++|+++++++.+...+ +++|+
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~-----dkVtVI~gd~eev~LP-EKVDI 431 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWG-----SQVTVVSSDMREWVAP-EKADI 431 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTG-----GGEEEEESCTTTCCCS-SCEEE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCC-----CeEEEEeCcceeccCC-cccCE
Confidence 57999999999985544443 22223799999997 566778888877765 7899999999886555 79999
Q ss_pred EEEccCC--------CCchHHHHHhcCCCcEEE
Q 028002 147 IHVGAAA--------PEIPQALIDQLKPGGRMV 171 (215)
Q Consensus 147 V~~~~~~--------~~~~~~~~~~Lk~gG~lv 171 (215)
|++--.- ..++....+.|||||.++
T Consensus 432 IVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 9865321 123345568999999863
No 280
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.74 E-value=6.6e-08 Score=83.10 Aligned_cols=124 Identities=15% Similarity=0.078 Sum_probs=89.7
Q ss_pred CcccchhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCC------------CCeEEEEecChHHHHHHHHHH
Q 028002 46 NATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGP------------QGRAVGVEHIPELVVSSIQNI 113 (215)
Q Consensus 46 ~~~~~~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~------------~~~v~~~D~s~~~~~~a~~~~ 113 (215)
|++.+.+.+...|++.+. ..++.+|+|-+||+|.+...+.+.+.. ...++|+|+++.+...|+-++
T Consensus 197 GqfyTP~~Vv~lmv~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 197 GEFYTPRPVVRFMVEVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp CCCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred ceECCcHHHHHHHHHhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 666666677777777776 677889999999999998877665421 146999999999999999888
Q ss_pred HhhcccCcccCCCeEEEeCCCCCCCC----CCCCccEEEEccCCCC----------------------chHHHHHhcC--
Q 028002 114 EKSAAAPLLKEGSLSVHVGDGRKGWP----EFAPYDAIHVGAAAPE----------------------IPQALIDQLK-- 165 (215)
Q Consensus 114 ~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~~D~V~~~~~~~~----------------------~~~~~~~~Lk-- 165 (215)
--++. ....+..+|...... ....||+|++++++.. ++..+.+.||
T Consensus 275 ~lhg~------~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~ 348 (530)
T 3ufb_A 275 LLHGL------EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRP 348 (530)
T ss_dssp HHHTC------SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCT
T ss_pred HhcCC------ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhh
Confidence 76654 345667777654321 2247999999998731 1133456665
Q ss_pred -----CCcEEEEEeCCC
Q 028002 166 -----PGGRMVIPVGNI 177 (215)
Q Consensus 166 -----~gG~lv~~~~~~ 177 (215)
+||++.+.+|++
T Consensus 349 ~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 349 GHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp TSSSSSCCEEEEEEEHH
T ss_pred hhccCCCceEEEEecch
Confidence 799999877653
No 281
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.72 E-value=4.1e-08 Score=77.58 Aligned_cols=102 Identities=8% Similarity=0.052 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhC----CCCeEEEEecChH--------------------------HHHHHHHHHHhh
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVG----PQGRAVGVEHIPE--------------------------LVVSSIQNIEKS 116 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~----~~~~v~~~D~s~~--------------------------~~~~a~~~~~~~ 116 (215)
.....|||+|+..|+.+..++..+. ++++++++|..+. ..+.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 4457999999999999998877653 3589999996421 466788888876
Q ss_pred cccCcccCCCeEEEeCCCCCCCCC--CCCccEEEEccCCC----CchHHHHHhcCCCcEEEE
Q 028002 117 AAAPLLKEGSLSVHVGDGRKGWPE--FAPYDAIHVGAAAP----EIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 117 ~~~~~~~~~~v~~~~~d~~~~~~~--~~~~D~V~~~~~~~----~~~~~~~~~Lk~gG~lv~ 172 (215)
+. ..++++++.+++.+..+. .++||+|+.+.... ..++.+...|+|||++++
T Consensus 185 gl----~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 185 DL----LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp TC----CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CC----CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEE
Confidence 64 126899999998765442 26899999998762 234677889999999988
No 282
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.68 E-value=3e-08 Score=77.48 Aligned_cols=108 Identities=19% Similarity=0.173 Sum_probs=72.5
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHh------CCC-----CeEEEEecCh---HHH-----------HHHHHHHHhhccc--
Q 028002 67 KPGMHALDIGSGTGYLTACFALMV------GPQ-----GRAVGVEHIP---ELV-----------VSSIQNIEKSAAA-- 119 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~------~~~-----~~v~~~D~s~---~~~-----------~~a~~~~~~~~~~-- 119 (215)
++..+|||+|+|+|..+..+++.. .|+ .+++++|..+ ..+ +.+++.+..+...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 345799999999999998877654 453 4899999887 333 3555555542110
Q ss_pred ------CcccCCCeEEEeCCCCCCCCCC-----CCccEEEEccCCC---------CchHHHHHhcCCCcEEEEEe
Q 028002 120 ------PLLKEGSLSVHVGDGRKGWPEF-----APYDAIHVGAAAP---------EIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 120 ------~~~~~~~v~~~~~d~~~~~~~~-----~~~D~V~~~~~~~---------~~~~~~~~~Lk~gG~lv~~~ 174 (215)
-.-+..++++..+|+.+.++.. ..||+|+.++-.+ .+++.+.++|+|||+|+.-+
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 0001246789999987643321 2799999986321 25568999999999998633
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.59 E-value=9.8e-08 Score=83.34 Aligned_cols=97 Identities=16% Similarity=0.054 Sum_probs=66.4
Q ss_pred CCEEEEEcCCccHHHHHHHHH---hC---------CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC
Q 028002 69 GMHALDIGSGTGYLTACFALM---VG---------PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK 136 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~---~~---------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~ 136 (215)
+..|||+|||+|.++...++. .+ ...+|+++|.++.+....+.... ++.. +.++++.++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~-----d~VtVI~gd~ee 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK-----RRVTIIESDMRS 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT-----TCSEEEESCGGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC-----CeEEEEeCchhh
Confidence 458999999999997543222 22 12499999999977765554443 4443 679999999987
Q ss_pred CCCC-----CCCccEEEEccCC----C----CchHHHHHhcCCCcEEE
Q 028002 137 GWPE-----FAPYDAIHVGAAA----P----EIPQALIDQLKPGGRMV 171 (215)
Q Consensus 137 ~~~~-----~~~~D~V~~~~~~----~----~~~~~~~~~Lk~gG~lv 171 (215)
...+ .+++|+|++--.- . ..++.+.+.|||||.++
T Consensus 484 v~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 484 LPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 5431 3789999876532 1 23344468899999753
No 284
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.57 E-value=1.4e-07 Score=73.88 Aligned_cols=85 Identities=24% Similarity=0.285 Sum_probs=69.6
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
+..++++.+. ++++..++|.+||.|..+..+++. + ++|+|+|.++.+++.+++ +.. .++.+++++
T Consensus 10 Ll~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~-~--g~VigiD~Dp~Ai~~A~~-L~~---------~rv~lv~~~ 74 (285)
T 1wg8_A 10 LYQEALDLLA--VRPGGVYVDATLGGAGHARGILER-G--GRVIGLDQDPEAVARAKG-LHL---------PGLTVVQGN 74 (285)
T ss_dssp THHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHH-TCC---------TTEEEEESC
T ss_pred HHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC-C--CEEEEEeCCHHHHHHHHh-hcc---------CCEEEEECC
Confidence 4788889887 788999999999999999999987 2 799999999999999987 532 489999999
Q ss_pred CCCCC---C--CCCCccEEEEccCC
Q 028002 134 GRKGW---P--EFAPYDAIHVGAAA 153 (215)
Q Consensus 134 ~~~~~---~--~~~~~D~V~~~~~~ 153 (215)
+.... . ..+++|.|+++.+.
T Consensus 75 f~~l~~~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 75 FRHLKRHLAALGVERVDGILADLGV 99 (285)
T ss_dssp GGGHHHHHHHTTCSCEEEEEEECSC
T ss_pred cchHHHHHHHcCCCCcCEEEeCCcc
Confidence 87531 1 12579999987654
No 285
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.51 E-value=1.7e-07 Score=73.04 Aligned_cols=111 Identities=12% Similarity=-0.000 Sum_probs=69.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
+.++.+.. .++++.+|||+|||+|..+..++...+ ...+.++|+...+...... . .... .++.....++
T Consensus 63 L~ei~ek~--~l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-----~--~~~g-~~ii~~~~~~ 131 (277)
T 3evf_A 63 LRWFHERG--YVKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-----V--QSLG-WNIITFKDKT 131 (277)
T ss_dssp HHHHHHTT--SSCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-----C--CBTT-GGGEEEECSC
T ss_pred HHHHHHhC--CCCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-----c--CcCC-CCeEEEeccc
Confidence 44445552 378888999999999999998887632 2578888877442100000 0 0000 1444455554
Q ss_pred CCCCCCCCCccEEEEccCCC------------CchHHHHHhcCCC-cEEEEEeCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAP------------EIPQALIDQLKPG-GRMVIPVGN 176 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~------------~~~~~~~~~Lk~g-G~lv~~~~~ 176 (215)
.......++||+|+++.... .+++.+.++|+|| |.+++-+..
T Consensus 132 dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 132 DIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred eehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 33223337899999987554 1224456899999 999997765
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.50 E-value=4.1e-07 Score=64.10 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=69.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCcc-HHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTG-YLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G-~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
...+.+.+.....++.+|||+|||+| ..+..+++..| ..|+++|+++..++ +++.|
T Consensus 22 ~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g--~~V~atDInp~Av~---------------------~v~dD 78 (153)
T 2k4m_A 22 WNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSK--VDLVLTDIKPSHGG---------------------IVRDD 78 (153)
T ss_dssp HHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSC--CEEEEECSSCSSTT---------------------EECCC
T ss_pred HHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCC--CeEEEEECCccccc---------------------eEEcc
Confidence 44455555555667789999999999 69999987434 68999999886433 67777
Q ss_pred CCCCCCCC-CCccEEEEccCCCCchHHHHHhcCC-CcEEEEE
Q 028002 134 GRKGWPEF-APYDAIHVGAAAPEIPQALIDQLKP-GGRMVIP 173 (215)
Q Consensus 134 ~~~~~~~~-~~~D~V~~~~~~~~~~~~~~~~Lk~-gG~lv~~ 173 (215)
+.+..... ..||+|++..+..++...+.++-+. |.-+++.
T Consensus 79 iF~P~~~~Y~~~DLIYsirPP~El~~~i~~lA~~v~adliI~ 120 (153)
T 2k4m_A 79 ITSPRMEIYRGAALIYSIRPPAEIHSSLMRVADAVGARLIIK 120 (153)
T ss_dssp SSSCCHHHHTTEEEEEEESCCTTTHHHHHHHHHHHTCEEEEE
T ss_pred CCCCcccccCCcCEEEEcCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 77643321 4899999888888888777766544 5555553
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.49 E-value=8.8e-08 Score=78.26 Aligned_cols=106 Identities=19% Similarity=0.151 Sum_probs=76.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcc--cCcccCCCeEEEeCCCCCCCC----C
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAA--APLLKEGSLSVHVGDGRKGWP----E 140 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~v~~~~~d~~~~~~----~ 140 (215)
.+..+||-+|.|.|.....+++. .+ .+++.+|+++.+++.+++.+..... ......++++++.+|+..... .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-CC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 34579999999999999999986 45 7899999999999999987643211 000112568999999865432 2
Q ss_pred CCCccEEEEccCC----------------CCchHHHHHhcCCCcEEEEEe
Q 028002 141 FAPYDAIHVGAAA----------------PEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 141 ~~~~D~V~~~~~~----------------~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
.+.||+|+.+... ..+.+.+.+.|+|||+++.-.
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 3579999988421 112356789999999998754
No 288
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.34 E-value=5.6e-07 Score=72.16 Aligned_cols=87 Identities=17% Similarity=0.235 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
++.++++.|. ++++..++|..||.|..+..+++.++++++|+|+|.++.+++.++ ++. ..++.+++++
T Consensus 45 Ll~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---------~~Rv~lv~~n 112 (347)
T 3tka_A 45 LLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---------DPRFSIIHGP 112 (347)
T ss_dssp TTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---------CTTEEEEESC
T ss_pred cHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---------CCcEEEEeCC
Confidence 5678888887 788999999999999999999998888899999999999999884 331 1689999998
Q ss_pred CCCCC---CC---CCCccEEEEccC
Q 028002 134 GRKGW---PE---FAPYDAIHVGAA 152 (215)
Q Consensus 134 ~~~~~---~~---~~~~D~V~~~~~ 152 (215)
..... .. .+++|.|+.+..
T Consensus 113 F~~l~~~L~~~g~~~~vDgILfDLG 137 (347)
T 3tka_A 113 FSALGEYVAERDLIGKIDGILLDLG 137 (347)
T ss_dssp GGGHHHHHHHTTCTTCEEEEEEECS
T ss_pred HHHHHHHHHhcCCCCcccEEEECCc
Confidence 76531 11 136999987764
No 289
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.28 E-value=3.6e-07 Score=71.36 Aligned_cols=111 Identities=15% Similarity=0.037 Sum_probs=68.8
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
+.++.+.. .+.++.+|||+|||+|..+..++...+ ...++++|+...+...+... .. .. .++.....+.
T Consensus 79 L~ei~eK~--~Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~~------~g-~~ii~~~~~~ 147 (282)
T 3gcz_A 79 LRWMEERG--YVKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-TT------LG-WNLIRFKDKT 147 (282)
T ss_dssp HHHHHHTT--SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-CB------TT-GGGEEEECSC
T ss_pred HHHHHHhc--CCCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-cc------CC-CceEEeeCCc
Confidence 44555554 378889999999999999999887643 36789999876532211100 00 01 1333333322
Q ss_pred CCCCCCCCCccEEEEccCCC------------CchHHHHHhcCCC--cEEEEEeCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAP------------EIPQALIDQLKPG--GRMVIPVGN 176 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~------------~~~~~~~~~Lk~g--G~lv~~~~~ 176 (215)
........++|+|+++.... .+++-+.++|+|| |.+++-+..
T Consensus 148 dv~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 148 DVFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CGGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred chhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 21112237899999997654 1223456889999 999997655
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.25 E-value=8.3e-06 Score=66.43 Aligned_cols=74 Identities=20% Similarity=0.164 Sum_probs=58.7
Q ss_pred cCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 65 NLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
.+++|+++||+||++|+.+..++++. ++|+++|..+-. . .+.. .++++++++|.....+...+|
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~l~-~----~l~~--------~~~V~~~~~d~~~~~~~~~~~ 271 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGPMA-Q----SLMD--------TGQVTWLREDGFKFRPTRSNI 271 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSCCC-H----HHHT--------TTCEEEECSCTTTCCCCSSCE
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhhcC-h----hhcc--------CCCeEEEeCccccccCCCCCc
Confidence 36889999999999999999999884 799999976421 1 1111 268999999998877765789
Q ss_pred cEEEEccCCC
Q 028002 145 DAIHVGAAAP 154 (215)
Q Consensus 145 D~V~~~~~~~ 154 (215)
|+|+|+....
T Consensus 272 D~vvsDm~~~ 281 (375)
T 4auk_A 272 SWMVCDMVEK 281 (375)
T ss_dssp EEEEECCSSC
T ss_pred CEEEEcCCCC
Confidence 9999998764
No 291
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.21 E-value=6.6e-06 Score=67.49 Aligned_cols=108 Identities=15% Similarity=0.039 Sum_probs=67.5
Q ss_pred CCEEEEEcCCccHHHHHHHH--------Hh------CCCCeEEEEecChHHHHHHHHHHHhhccc---------CcccCC
Q 028002 69 GMHALDIGSGTGYLTACFAL--------MV------GPQGRAVGVEHIPELVVSSIQNIEKSAAA---------PLLKEG 125 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~--------~~------~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---------~~~~~~ 125 (215)
..+|+|+|||+|..+..++. .. .|.-+|..-|+........-+.+...... ......
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 47899999999998887632 21 14468888888777655554444321100 000000
Q ss_pred CeEEEeCCCCCCCCCCCCccEEEEccCCCCch--------------------------------------------HHHH
Q 028002 126 SLSVHVGDGRKGWPEFAPYDAIHVGAAAPEIP--------------------------------------------QALI 161 (215)
Q Consensus 126 ~v~~~~~d~~~~~~~~~~~D~V~~~~~~~~~~--------------------------------------------~~~~ 161 (215)
-+.-+.+.+.....+.+++|+|+++..++++. +...
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223344444444558999999999887643 2337
Q ss_pred HhcCCCcEEEEEeCC
Q 028002 162 DQLKPGGRMVIPVGN 176 (215)
Q Consensus 162 ~~Lk~gG~lv~~~~~ 176 (215)
+.|+|||++++++..
T Consensus 213 ~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHEEEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEEec
Confidence 899999999998753
No 292
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.19 E-value=6.8e-06 Score=67.53 Aligned_cols=82 Identities=10% Similarity=-0.098 Sum_probs=47.7
Q ss_pred CCEEEEEcCCccHHHHHHHHH-------------h---CCCCeEEEEecChHHHHHHHHH-------HH-hhcccCcccC
Q 028002 69 GMHALDIGSGTGYLTACFALM-------------V---GPQGRAVGVEHIPELVVSSIQN-------IE-KSAAAPLLKE 124 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~-------------~---~~~~~v~~~D~s~~~~~~a~~~-------~~-~~~~~~~~~~ 124 (215)
..+|+|+||++|..+..+... . .|.-+|+..|+...-....-+. +. ..+..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~----- 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRK----- 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCC-----
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCC-----
Confidence 478999999999999877665 1 1345788888763221111111 11 11110
Q ss_pred CCeEEEeCCC---CCCCCCCCCccEEEEccCCCC
Q 028002 125 GSLSVHVGDG---RKGWPEFAPYDAIHVGAAAPE 155 (215)
Q Consensus 125 ~~v~~~~~d~---~~~~~~~~~~D~V~~~~~~~~ 155 (215)
.+.-++.+.. ...+.+.+++|+|+++..+++
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHW 161 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHW 161 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTB
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeee
Confidence 1234444433 333445589999999998866
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.14 E-value=7.9e-06 Score=65.09 Aligned_cols=57 Identities=25% Similarity=0.302 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS 116 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 116 (215)
+...++... ..++..|||++||+|..+..+++. | .+++|+|+++.+++.|++++...
T Consensus 224 l~~~~i~~~---~~~~~~vlD~f~GsGt~~~~a~~~-g--~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 224 LAERLVRMF---SFVGDVVLDPFAGTGTTLIAAARW-G--RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHH---CCTTCEEEETTCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHHHh
Confidence 455555554 467899999999999999998876 3 79999999999999999998764
No 294
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.12 E-value=2.3e-06 Score=69.75 Aligned_cols=103 Identities=13% Similarity=0.089 Sum_probs=68.4
Q ss_pred CCEEEEEcCCccHHHHHHHHH---------------hCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe--
Q 028002 69 GMHALDIGSGTGYLTACFALM---------------VGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV-- 131 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~---------------~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~-- 131 (215)
..+|+|+||++|..+..+... -.|.-+|+..|...+.....-+.+...... .+..+..
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~-----~~~~f~~gv 126 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV-----DGVCFINGV 126 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSC-----TTCEEEEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhccc-----CCCEEEEec
Confidence 367999999999877644332 124468999999888877776655432100 1223333
Q ss_pred -CCCCCCCCCCCCccEEEEccCCCCch---------------------------------------HHHHHhcCCCcEEE
Q 028002 132 -GDGRKGWPEFAPYDAIHVGAAAPEIP---------------------------------------QALIDQLKPGGRMV 171 (215)
Q Consensus 132 -~d~~~~~~~~~~~D~V~~~~~~~~~~---------------------------------------~~~~~~Lk~gG~lv 171 (215)
+.+...+.+.+++|+|+++..++++. +.-.+.|+|||+++
T Consensus 127 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mv 206 (359)
T 1m6e_X 127 PGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMV 206 (359)
T ss_dssp ESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEE
T ss_pred chhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 44444455558999999998876532 22378999999999
Q ss_pred EEeCC
Q 028002 172 IPVGN 176 (215)
Q Consensus 172 ~~~~~ 176 (215)
+++..
T Consensus 207 l~~~g 211 (359)
T 1m6e_X 207 LTILG 211 (359)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 98743
No 295
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.11 E-value=2e-05 Score=61.91 Aligned_cols=111 Identities=13% Similarity=-0.028 Sum_probs=67.5
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
+.++.+. . .+.++.+|||+||++|..+..+++..+. ..|+++|+......... ...... .++.......
T Consensus 70 L~ei~ek-~-l~~~g~~vlDLGaaPGgWsqva~~~~gv-~sV~Gvdlg~~~~~~P~-------~~~~~~-~~iv~~~~~~ 138 (300)
T 3eld_A 70 IRWLHER-G-YLRITGRVLDLGCGRGGWSYYAAAQKEV-MSVKGYTLGIEGHEKPI-------HMQTLG-WNIVKFKDKS 138 (300)
T ss_dssp HHHHHHH-T-SCCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCCTTSCCCC-------CCCBTT-GGGEEEECSC
T ss_pred HHHHHHh-C-CCCCCCEEEEcCCCCCHHHHHHHHhcCC-ceeeeEEeccccccccc-------cccccC-CceEEeecCc
Confidence 4455555 3 4678899999999999999999976432 57889998653211000 000001 1222222222
Q ss_pred CCCCCCCCCccEEEEccCCC------------CchHHHHHhcCCC-cEEEEEeCC
Q 028002 135 RKGWPEFAPYDAIHVGAAAP------------EIPQALIDQLKPG-GRMVIPVGN 176 (215)
Q Consensus 135 ~~~~~~~~~~D~V~~~~~~~------------~~~~~~~~~Lk~g-G~lv~~~~~ 176 (215)
.......+++|+|+++.... .+++-+.++|+|| |.|++-+..
T Consensus 139 di~~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 139 NVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eeeecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 21112236899999987654 1223456889999 999997655
No 296
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.11 E-value=1.4e-05 Score=65.09 Aligned_cols=81 Identities=19% Similarity=0.173 Sum_probs=65.3
Q ss_pred cCCc-ccchhHHHHHHHHHHHhcCC------CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh
Q 028002 44 GYNA-TISAPHMHATCLQLLEENLK------PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS 116 (215)
Q Consensus 44 ~~~~-~~~~~~~~~~~l~~l~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 116 (215)
.+|+ ++..+.+...+++.+. +. ++..|||||+|.|.+|..+++...+ .+++++|+++..+...++.+ .
T Consensus 29 ~lGQnFL~d~~i~~~Iv~~~~--l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~-~- 103 (353)
T 1i4w_A 29 FYGFKYLWNPTVYNKIFDKLD--LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKF-E- 103 (353)
T ss_dssp GGGCCCBCCHHHHHHHHHHHC--GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHT-T-
T ss_pred CCCcCccCCHHHHHHHHHhcc--CCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhc-c-
Confidence 3455 4678889999999986 43 3689999999999999999987433 68999999999988887765 2
Q ss_pred cccCcccCCCeEEEeCCCCC
Q 028002 117 AAAPLLKEGSLSVHVGDGRK 136 (215)
Q Consensus 117 ~~~~~~~~~~v~~~~~d~~~ 136 (215)
.++++++.+|+..
T Consensus 104 -------~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 104 -------GSPLQILKRDPYD 116 (353)
T ss_dssp -------TSSCEEECSCTTC
T ss_pred -------CCCEEEEECCccc
Confidence 1589999999854
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.03 E-value=3.5e-06 Score=64.87 Aligned_cols=107 Identities=17% Similarity=0.080 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHH--hCC-CCeEEEEecChHHHHHHHHHHHhhcccCc-ccCCCeEE
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALM--VGP-QGRAVGVEHIPELVVSSIQNIEKSAAAPL-LKEGSLSV 129 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~-~~~~~v~~ 129 (215)
-+.++.+.. .++|+++|+|+||+.|+.+..+++. .+. .+.++++|. + . ....+. .+..-+.+
T Consensus 61 KL~EIdeK~--likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~----------~P~~~~~~Gv~~i~~ 126 (269)
T 2px2_A 61 KLRWLVERR--FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-E----------EPMLMQSYGWNIVTM 126 (269)
T ss_dssp HHHHHHHTT--SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-C----------CCCCCCSTTGGGEEE
T ss_pred HHHHHHHcC--CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-c----------CCCcccCCCceEEEe
Confidence 345555553 4899999999999999999999887 311 234444442 0 0 000000 00012355
Q ss_pred EeC-CCCCCCCCCCCccEEEEccCCCC------------chHHHHHhcCCCc-EEEEEeCC
Q 028002 130 HVG-DGRKGWPEFAPYDAIHVGAAAPE------------IPQALIDQLKPGG-RMVIPVGN 176 (215)
Q Consensus 130 ~~~-d~~~~~~~~~~~D~V~~~~~~~~------------~~~~~~~~Lk~gG-~lv~~~~~ 176 (215)
.++ |+.+.. ..++|+|+|+..... .++-+.++|+||| .+++=+..
T Consensus 127 ~~G~Df~~~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 127 KSGVDVFYKP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp ECSCCGGGSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred eccCCccCCC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 556 876622 257999999975421 2234568899999 88875433
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.96 E-value=1.8e-05 Score=60.13 Aligned_cols=107 Identities=14% Similarity=0.052 Sum_probs=72.5
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC-C
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG-D 133 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~-d 133 (215)
+.++.+... ++++.+|+|+||++|..+..++...+. .+|+++|+-..-.+. ......++.+.++|..+ |
T Consensus 67 L~ei~ek~~--l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ghe~-------P~~~~s~gwn~v~fk~gvD 136 (267)
T 3p8z_A 67 LQWFVERNM--VIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGHEE-------PVPMSTYGWNIVKLMSGKD 136 (267)
T ss_dssp HHHHHHTTS--SCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTSCC-------CCCCCCTTTTSEEEECSCC
T ss_pred HHHHHHhcC--CCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCccC-------cchhhhcCcCceEEEeccc
Confidence 455555553 788999999999999999988887655 589999986643210 11112345578999998 8
Q ss_pred CCCCCCCCCCccEEEEccCCCC------------chHHHHHhcCCCcEEEEEe
Q 028002 134 GRKGWPEFAPYDAIHVGAAAPE------------IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~~------------~~~~~~~~Lk~gG~lv~~~ 174 (215)
+....+ .++|.|+|+-.-.. .++.+.+.|++ |-+++=+
T Consensus 137 v~~~~~--~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 137 VFYLPP--EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp GGGCCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred eeecCC--ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 644333 67999999865421 12234577888 6777643
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.86 E-value=5.1e-05 Score=59.18 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhh
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKS 116 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 116 (215)
+...++... ..++..|||.+||+|..+..+.+. | .+++|+|+++..++.+++++...
T Consensus 201 l~~~~i~~~---~~~~~~vlD~f~GsGtt~~~a~~~-g--r~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 201 LIERIIRAS---SNPNDLVLDCFMGSGTTAIVAKKL-G--RNFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp HHHHHHHHH---CCTTCEEEESSCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHHhc
Confidence 455555553 577899999999999999988876 3 79999999999999999998653
No 300
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.80 E-value=5.1e-05 Score=59.51 Aligned_cols=111 Identities=14% Similarity=0.030 Sum_probs=71.5
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC-C
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG-D 133 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~-d 133 (215)
+..+.+.. .+.++.+|||+||++|..+..++...+. ..|+|+|+-..-.+. ......+....+.+..+ |
T Consensus 83 L~ei~~~~--~l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~-------P~~~~ql~w~lV~~~~~~D 152 (321)
T 3lkz_A 83 LRWLVERR--FLEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEE-------PQLVQSYGWNIVTMKSGVD 152 (321)
T ss_dssp HHHHHHTT--SCCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCC-------CCCCCBTTGGGEEEECSCC
T ss_pred HHHHHHhc--CCCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccC-------cchhhhcCCcceEEEeccC
Confidence 45555553 3788899999999999999988877554 589999986642110 00001122245778777 6
Q ss_pred CCCCCCCCCCccEEEEccCCCC------------chHHHHHhcCCC-cEEEEEeCCC
Q 028002 134 GRKGWPEFAPYDAIHVGAAAPE------------IPQALIDQLKPG-GRMVIPVGNI 177 (215)
Q Consensus 134 ~~~~~~~~~~~D~V~~~~~~~~------------~~~~~~~~Lk~g-G~lv~~~~~~ 177 (215)
+....+ .++|.|+|+-.-.. +++.+.+.|++| |-++|=+-..
T Consensus 153 v~~l~~--~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 153 VFYRPS--ECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp TTSSCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred HhhCCC--CCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 644433 67999999875211 123345778888 8888754433
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.74 E-value=5.1e-05 Score=59.50 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=64.1
Q ss_pred HHHHHHHHh---cCCCCCEEEEEcC------CccHHHHHHHHHhCCC-CeEEEEecChHHHHHHHHHHHhhcccCcccCC
Q 028002 56 ATCLQLLEE---NLKPGMHALDIGS------GTGYLTACFALMVGPQ-GRAVGVEHIPELVVSSIQNIEKSAAAPLLKEG 125 (215)
Q Consensus 56 ~~~l~~l~~---~~~~~~~vLdiG~------G~G~~~~~l~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 125 (215)
..+.+.+.. -++.+++|||+|+ ..|+ .+++.+++. +.++++|+.+-.. ..
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS---~VLr~~~p~g~~VVavDL~~~~s-----------------da 153 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT---AVLRQWLPTGTLLVDSDLNDFVS-----------------DA 153 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH---HHHHHHSCTTCEEEEEESSCCBC-----------------SS
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH---HHHHHhCCCCcEEEEeeCccccc-----------------CC
Confidence 344555532 2466899999997 5666 344444665 5999999977421 01
Q ss_pred CeEEEeCCCCCCCCCCCCccEEEEccCC-------------CCch----HHHHHhcCCCcEEEEEeCC
Q 028002 126 SLSVHVGDGRKGWPEFAPYDAIHVGAAA-------------PEIP----QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 126 ~v~~~~~d~~~~~~~~~~~D~V~~~~~~-------------~~~~----~~~~~~Lk~gG~lv~~~~~ 176 (215)
. .++++|....... ++||+|+++... ..+. +-+.+.|+|||.|++=+..
T Consensus 154 ~-~~IqGD~~~~~~~-~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQ 219 (344)
T 3r24_A 154 D-STLIGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 219 (344)
T ss_dssp S-EEEESCGGGEEES-SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred C-eEEEccccccccC-CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEec
Confidence 2 4588886553333 789999988632 1122 3467899999999996544
No 302
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.69 E-value=5.1e-06 Score=65.15 Aligned_cols=105 Identities=11% Similarity=0.033 Sum_probs=77.2
Q ss_pred HHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC
Q 028002 55 HATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG 134 (215)
Q Consensus 55 ~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~ 134 (215)
+..+++.+.. . .+..+||+-+|||.++..+.+. + .+++.+|.++..++..++++.. ..++.+...|.
T Consensus 80 l~~yf~~l~~-~-n~~~~LDlfaGSGaLgiEaLS~-~--d~~vfvE~~~~a~~~L~~Nl~~--------~~~~~V~~~D~ 146 (283)
T 2oo3_A 80 FLEYISVIKQ-I-NLNSTLSYYPGSPYFAINQLRS-Q--DRLYLCELHPTEYNFLLKLPHF--------NKKVYVNHTDG 146 (283)
T ss_dssp GHHHHHHHHH-H-SSSSSCCEEECHHHHHHHHSCT-T--SEEEEECCSHHHHHHHTTSCCT--------TSCEEEECSCH
T ss_pred HHHHHHHHHH-h-cCCCceeEeCCcHHHHHHHcCC-C--CeEEEEeCCHHHHHHHHHHhCc--------CCcEEEEeCcH
Confidence 4556666653 3 3467899999999999998874 2 7899999999999988887754 15799999996
Q ss_pred CCC----CCCCCCccEEEEccCCCC--chHHHH------HhcCCCcEEEE
Q 028002 135 RKG----WPEFAPYDAIHVGAAAPE--IPQALI------DQLKPGGRMVI 172 (215)
Q Consensus 135 ~~~----~~~~~~~D~V~~~~~~~~--~~~~~~------~~Lk~gG~lv~ 172 (215)
... .+...+||+|++++++.. ..+.+. ..+.++|.+++
T Consensus 147 ~~~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 147 VSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HHHHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 542 233357999999999972 333322 35678998877
No 303
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.67 E-value=0.00021 Score=57.98 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=69.9
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCC
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAP 143 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 143 (215)
.++++.+||-+|+|. |..+..+++..| .+|++++.++...+.+++ .+. +.+ + .+.. .. . ..
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa------~~v--~-~~~~-~~-~-~~ 234 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALS----MGV------KHF--Y-TDPK-QC-K-EE 234 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHH----TTC------SEE--E-SSGG-GC-C-SC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHh----cCC------Cee--c-CCHH-HH-h-cC
Confidence 478899999999987 889999999876 589999999998887754 232 222 2 2221 11 1 27
Q ss_pred ccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 144 YDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 144 ~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
+|+|+.........+.+.+.|+++|.+++.
T Consensus 235 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 235 LDFIISTIPTHYDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEEEEECCCSCCCHHHHHTTEEEEEEEEEC
T ss_pred CCEEEECCCcHHHHHHHHHHHhcCCEEEEE
Confidence 999998888777889999999999999885
No 304
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.62 E-value=0.00042 Score=56.47 Aligned_cols=98 Identities=16% Similarity=0.020 Sum_probs=71.0
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC-----C--
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR-----K-- 136 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~-----~-- 136 (215)
.++++.+||-+|+|. |..+..+++..|. ..|+++|.++...+.+++. .. .-+.....+.. +
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l-~~---------~~~~~~~~~~~~~~~~~~v 244 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGA-CPLVITDIDEGRLKFAKEI-CP---------EVVTHKVERLSAEESAKKI 244 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH-CT---------TCEEEECCSCCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh-ch---------hcccccccccchHHHHHHH
Confidence 378899999999987 8899999998764 3599999999999988764 21 12222211110 0
Q ss_pred -CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 137 -GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 137 -~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.......+|+|+.........+.+.+.|+++|.+++.
T Consensus 245 ~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 245 VESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEE
Confidence 0112257999998887766778899999999999875
No 305
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.58 E-value=0.0003 Score=57.12 Aligned_cols=96 Identities=19% Similarity=0.181 Sum_probs=69.9
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC---CCCC---C
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG---DGRK---G 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~---d~~~---~ 137 (215)
.++++.+||-+|+|. |..+..+++..|. .+|+++|.++..++.+++. +.. .++.. +..+ .
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~l----Ga~--------~vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGA-GRIFAVGSRKHCCDIALEY----GAT--------DIINYKNGDIVEQILK 229 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTC-SSEEEECCCHHHHHHHHHH----TCC--------EEECGGGSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEECCCHHHHHHHHHh----CCc--------eEEcCCCcCHHHHHHH
Confidence 378899999999987 8889999988753 4799999999888877652 221 11111 1111 0
Q ss_pred CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+.........+.+.+.|+++|++++.
T Consensus 230 ~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 230 ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred HcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEe
Confidence 112246999998888778889999999999999875
No 306
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.56 E-value=0.00053 Score=56.13 Aligned_cols=95 Identities=21% Similarity=0.203 Sum_probs=69.4
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC---CCCC---C
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG---DGRK---G 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~---d~~~---~ 137 (215)
.++++.+||-.|+|. |..+..+++..|. .+|+++|.++...+.+++ .+.. .++.. +..+ .
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~----lGa~--------~vi~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGA-TTVILSTRQATKRRLAEE----VGAT--------ATVDPSAGDVVEAIAG 245 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHH----HTCS--------EEECTTSSCHHHHHHS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH----cCCC--------EEECCCCcCHHHHHHh
Confidence 378899999999987 8889999998763 489999999998887765 2221 11111 1100 0
Q ss_pred ---CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 ---WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ---~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
... +.+|+|+.........+.+.+.|++||.+++.
T Consensus 246 ~~~~~~-gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 246 PVGLVP-GGVDVVIECAGVAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTSSST-TCEEEEEECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred hhhccC-CCCCEEEECCCCHHHHHHHHHHhccCCEEEEE
Confidence 112 47999998877667788899999999999874
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.51 E-value=0.00042 Score=56.63 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=68.5
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC------C
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK------G 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~------~ 137 (215)
.++++.+||.+|+|. |..+..+++..|. .+|+++|.++..++.+++. +.. .++.....+ .
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~~Vi~~~~~~~~~~~a~~l----Ga~--------~vi~~~~~~~~~~~~~ 253 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQL----GAT--------HVINSKTQDPVAAIKE 253 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHHH----TCS--------EEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHHc----CCC--------EEecCCccCHHHHHHH
Confidence 378899999999987 8899999998763 3799999999988887642 221 112111111 0
Q ss_pred CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
... +.+|+|+.........+.+.+.|+++|++++.
T Consensus 254 ~~~-gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 254 ITD-GGVNFALESTGSPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp HTT-SCEEEEEECSCCHHHHHHHHHTEEEEEEEEEC
T ss_pred hcC-CCCcEEEECCCCHHHHHHHHHHHhcCCEEEEe
Confidence 112 37999998877666778899999999999874
No 308
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.49 E-value=0.00042 Score=56.37 Aligned_cols=95 Identities=19% Similarity=0.137 Sum_probs=68.2
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC------CCCC
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD------GRKG 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d------~~~~ 137 (215)
.++++.+||.+|+|. |..+..+++..|. .+|+++|.++...+.+++ .+. + .++..+ ....
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~----lGa------~--~vi~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAKE----IGA------D--LVLQISKESPQEIARK 234 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH----TTC------S--EEEECSSCCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH----hCC------C--EEEcCcccccchHHHH
Confidence 378899999999987 8889999988763 489999999988887754 222 1 112111 0000
Q ss_pred ---CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 ---WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ---~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
... ..+|+|+.........+.+.+.|+++|++++.
T Consensus 235 i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 235 VEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhC-CCCCEEEECCCChHHHHHHHHHhcCCCEEEEE
Confidence 011 46999998877666678889999999999874
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.49 E-value=0.00056 Score=56.50 Aligned_cols=95 Identities=20% Similarity=0.210 Sum_probs=67.3
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC----C-
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG----W- 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~----~- 138 (215)
.++++.+||.+|+|. |..+..+++..|. .+|+++|.++..++.+++ .+ .+++.....+. .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~----lG---------a~~i~~~~~~~~~~~~~ 247 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGA-ACVIVGDQNPERLKLLSD----AG---------FETIDLRNSAPLRDQID 247 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHT----TT---------CEEEETTSSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH----cC---------CcEEcCCCcchHHHHHH
Confidence 378899999999987 8899999998763 489999999998887753 22 12222111111 0
Q ss_pred --CCCCCccEEEEccCCCC--------------chHHHHHhcCCCcEEEEE
Q 028002 139 --PEFAPYDAIHVGAAAPE--------------IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 --~~~~~~D~V~~~~~~~~--------------~~~~~~~~Lk~gG~lv~~ 173 (215)
.....+|+|+....... ..+.+.+.|+++|++++.
T Consensus 248 ~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 248 QILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred HHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 01136999998776543 578889999999998764
No 310
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.47 E-value=0.00014 Score=59.49 Aligned_cols=93 Identities=22% Similarity=0.213 Sum_probs=68.3
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC---CCCCCCCC
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG---DGRKGWPE 140 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~---d~~~~~~~ 140 (215)
.++++.+||.+|+|. |..+..+++..| .+|++++.++..++.+++ .+.. . ++.. +......
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~~----lGa~------~--vi~~~~~~~~~~~~- 255 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAKA----LGAD------E--VVNSRNADEMAAHL- 255 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCS------E--EEETTCHHHHHTTT-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCc------E--EeccccHHHHHHhh-
Confidence 478899999999986 888889998876 579999999998888764 2221 1 1111 1001111
Q ss_pred CCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 141 FAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 141 ~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
+.+|+|+.........+.+.+.|+++|.++..
T Consensus 256 -~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 256 -KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp -TCEEEEEECCSSCCCHHHHHTTEEEEEEEEEC
T ss_pred -cCCCEEEECCCCHHHHHHHHHHhccCCEEEEe
Confidence 47999998888777788899999999998874
No 311
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.45 E-value=0.00047 Score=55.96 Aligned_cols=95 Identities=17% Similarity=0.150 Sum_probs=67.5
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC----CCCCCC
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD----GRKGWP 139 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d----~~~~~~ 139 (215)
.++++.+||-+|+|. |..+..+++..| .+|++++.++...+.+++ .+. + .++..+ ..+...
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa------~--~~~~~~~~~~~~~~i~ 230 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAKN----CGA------D--VTLVVDPAKEEESSII 230 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH----TTC------S--EEEECCTTTSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHHH----hCC------C--EEEcCcccccHHHHHH
Confidence 378899999999986 888889998876 469999999998887753 222 1 112111 110000
Q ss_pred ---C---CCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 140 ---E---FAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 140 ---~---~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
. ...+|+|+.........+.+.+.|+++|.++..
T Consensus 231 ~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 231 ERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred HHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 0 246999998877666678889999999999874
No 312
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.41 E-value=0.00097 Score=55.01 Aligned_cols=95 Identities=15% Similarity=0.181 Sum_probs=67.4
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC-----
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW----- 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~----- 138 (215)
.++++.+||.+|+|. |.++..+++..|. .+|+++|.++..++.+++ .+ .+.+.....+.+
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga-~~Vi~~~~~~~~~~~a~~----lG---------a~~i~~~~~~~~~~~v~ 247 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGA-AVVIVGDLNPARLAHAKA----QG---------FEIADLSLDTPLHEQIA 247 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH----TT---------CEEEETTSSSCHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHHHH----cC---------CcEEccCCcchHHHHHH
Confidence 478899999999987 8899999998763 479999999998888754 22 122221111100
Q ss_pred --CCCCCccEEEEccCCCC---------------chHHHHHhcCCCcEEEEE
Q 028002 139 --PEFAPYDAIHVGAAAPE---------------IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 --~~~~~~D~V~~~~~~~~---------------~~~~~~~~Lk~gG~lv~~ 173 (215)
.....+|+|+....... ..+.+.+.|+++|++++.
T Consensus 248 ~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 248 ALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 11136999998776542 567889999999999764
No 313
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=97.37 E-value=0.0017 Score=52.34 Aligned_cols=96 Identities=16% Similarity=0.165 Sum_probs=69.1
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC------C
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK------G 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~------~ 137 (215)
...++.+||-.|+|. |.++..+++..|. ..++++|.++..++.+++ .+.. .++...-.+ .
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~-~~vi~~~~~~~k~~~a~~----lGa~--------~~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGA-KSVTAIDISSEKLALAKS----FGAM--------QTFNSSEMSAPQMQSV 223 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH----TTCS--------EEEETTTSCHHHHHHH
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCC-cEEEEEechHHHHHHHHH----cCCe--------EEEeCCCCCHHHHHHh
Confidence 478899999999987 7888888888764 578999999998888764 3321 222211111 0
Q ss_pred CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+.........+.+.++|+++|.+++.
T Consensus 224 ~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 224 LRELRFNQLILETAGVPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp HGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEEC
T ss_pred hcccCCcccccccccccchhhhhhheecCCeEEEEE
Confidence 112246899988887777788899999999999874
No 314
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.28 E-value=0.0014 Score=53.31 Aligned_cols=95 Identities=15% Similarity=0.055 Sum_probs=68.1
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC------
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG------ 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~------ 137 (215)
.++++.+||-+|+|. |..+..+++..| .+|++++.++..++.+++ .+. +. ++..+..+.
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa------~~--vi~~~~~~~~~~v~~ 251 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAFA----LGA------DH--GINRLEEDWVERVYA 251 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH----HTC------SE--EEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHHH----cCC------CE--EEcCCcccHHHHHHH
Confidence 467899999999887 888889998876 589999999988888754 222 11 222111110
Q ss_pred CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 138 WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
......+|+|+.... ....+.+.+.|+++|.+++.-
T Consensus 252 ~~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 252 LTGDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp HHTTCCEEEEEEETT-SSCHHHHHHHEEEEEEEEEEC
T ss_pred HhCCCCceEEEECCC-hHHHHHHHHHhhcCCEEEEEe
Confidence 012237999998777 567788899999999998753
No 315
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.27 E-value=0.0012 Score=54.31 Aligned_cols=73 Identities=21% Similarity=0.090 Sum_probs=56.3
Q ss_pred CEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC--------CC
Q 028002 70 MHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--------EF 141 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--------~~ 141 (215)
.+++|+.||.|.++..+.+. |. ..+.++|+++.+++..+.++ ....++.+|+.+... ..
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~-~~v~avE~d~~a~~t~~~N~-----------~~~~~~~~DI~~~~~~~~~~~~~~~ 69 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GF-DVKMAVEIDQHAINTHAINF-----------PRSLHVQEDVSLLNAEIIKGFFKND 69 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TC-EEEEEECSCHHHHHHHHHHC-----------TTSEEECCCGGGCCHHHHHHHHCSC
T ss_pred CeEEEEccCcCHHHHHHHHC-CC-cEEEEEeCCHHHHHHHHHhC-----------CCCceEecChhhcCHHHHHhhcccC
Confidence 58999999999999999887 43 56789999999888777654 345677788765422 12
Q ss_pred CCccEEEEccCCCC
Q 028002 142 APYDAIHVGAAAPE 155 (215)
Q Consensus 142 ~~~D~V~~~~~~~~ 155 (215)
..+|+|+..++++.
T Consensus 70 ~~~D~i~ggpPCQ~ 83 (376)
T 3g7u_A 70 MPIDGIIGGPPCQG 83 (376)
T ss_dssp CCCCEEEECCCCCT
T ss_pred CCeeEEEecCCCCC
Confidence 57999999998754
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.24 E-value=0.00041 Score=55.99 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=68.7
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC---CC-
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG---WP- 139 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~- 139 (215)
.++++.+||-.|+|. |..+..+++..| .+|+++|.++...+.+++ .+. + .++.....+. ..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa------~--~~i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLARR----LGA------E--VAVNARDTDPAAWLQK 228 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH----TTC------S--EEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHH----cCC------C--EEEeCCCcCHHHHHHH
Confidence 378899999999987 999999999876 589999999998887754 222 1 1121111110 00
Q ss_pred CCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 140 EFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 140 ~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
..+.+|+|+.........+.+.+.|+++|.+++.
T Consensus 229 ~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 229 EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEe
Confidence 0136899988877667788899999999999875
No 317
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.23 E-value=0.0011 Score=54.26 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=68.9
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC-CCCC-----
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD-GRKG----- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d-~~~~----- 137 (215)
.++++.+||-+|+|. |..+..+++..|. .+|+++|.++..++.+++ .+.. . ++... ....
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga-~~Vi~~~~~~~~~~~a~~----lGa~------~--vi~~~~~~~~~~~~i 256 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGA-SRIIGIDIDSKKYETAKK----FGVN------E--FVNPKDHDKPIQEVI 256 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTC-SCEEEECSCTTHHHHHHT----TTCC------E--EECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH----cCCc------E--EEccccCchhHHHHH
Confidence 367899999999986 8999999998864 489999999998887753 2321 1 11111 0010
Q ss_pred --CCCCCCccEEEEccCCCCchHHHHHhcCCC-cEEEEE
Q 028002 138 --WPEFAPYDAIHVGAAAPEIPQALIDQLKPG-GRMVIP 173 (215)
Q Consensus 138 --~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~g-G~lv~~ 173 (215)
... +.+|+|+.........+.+.+.|++| |++++.
T Consensus 257 ~~~~~-gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 257 VDLTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHTT-SCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhcC-CCCCEEEECCCCHHHHHHHHHHhhccCCEEEEE
Confidence 112 47999998888767788899999997 998874
No 318
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=97.23 E-value=0.00058 Score=54.51 Aligned_cols=89 Identities=17% Similarity=0.104 Sum_probs=61.5
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCC
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAP 143 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 143 (215)
.++++.+||-+|+|. |..+..+++..| .+|++++ ++...+.+++ .+.. .++ .| .+.. ...
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~----lGa~--------~v~-~d-~~~v--~~g 199 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAAK----RGVR--------HLY-RE-PSQV--TQK 199 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHHH----HTEE--------EEE-SS-GGGC--CSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHHH----cCCC--------EEE-cC-HHHh--CCC
Confidence 367899999999986 899999999886 4899999 8888887764 2221 111 13 2222 368
Q ss_pred ccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 144 YDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 144 ~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
+|+|+....-... ..+.+.|+++|.++..
T Consensus 200 ~Dvv~d~~g~~~~-~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 200 YFAIFDAVNSQNA-AALVPSLKANGHIICI 228 (315)
T ss_dssp EEEEECC--------TTGGGEEEEEEEEEE
T ss_pred ccEEEECCCchhH-HHHHHHhcCCCEEEEE
Confidence 9999876655444 5678999999999886
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.21 E-value=0.0036 Score=51.09 Aligned_cols=95 Identities=18% Similarity=0.151 Sum_probs=68.1
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC-----CCC--
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD-----GRK-- 136 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d-----~~~-- 136 (215)
.++++.+||-+|+|. |..+..+++..|. .+|+++|.++...+.+++ .+.. .++... ..+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~----lGa~--------~vi~~~~~~~~~~~~i 254 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAIE----LGAT--------ECLNPKDYDKPIYEVI 254 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHH----TTCS--------EEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHH----cCCc--------EEEecccccchHHHHH
Confidence 478899999999987 8889999998763 379999999998887764 2221 111111 100
Q ss_pred -CCCCCCCccEEEEccCCCCchHHHHHhcCCC-cEEEEE
Q 028002 137 -GWPEFAPYDAIHVGAAAPEIPQALIDQLKPG-GRMVIP 173 (215)
Q Consensus 137 -~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~g-G~lv~~ 173 (215)
.... +.+|+|+.........+.+.+.|+++ |.++..
T Consensus 255 ~~~t~-gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 255 CEKTN-GGVDYAVECAGRIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHHTT-SCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhC-CCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEE
Confidence 0011 37999998877666778889999999 998874
No 320
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.20 E-value=0.00014 Score=59.23 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=67.1
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC----CCCCCCC
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG----DGRKGWP 139 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~----d~~~~~~ 139 (215)
.++++.+||-+|+|. |..+..+++..| .+|++++.++..++.+++ .+. +. ++.. +......
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa------~~--v~~~~~~~~~~~~~~ 241 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGA------DH--YIATLEEGDWGEKYF 241 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTC------SE--EEEGGGTSCHHHHSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCC------CE--EEcCcCchHHHHHhh
Confidence 478899999999976 888889998876 479999999988887764 222 11 1111 1111111
Q ss_pred CCCCccEEEEccCC--CCchHHHHHhcCCCcEEEEE
Q 028002 140 EFAPYDAIHVGAAA--PEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 140 ~~~~~D~V~~~~~~--~~~~~~~~~~Lk~gG~lv~~ 173 (215)
+.+|+|+..... ....+.+.+.|+++|.++..
T Consensus 242 --~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 242 --DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp --SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEEC
T ss_pred --cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEe
Confidence 479999988776 56677888999999998874
No 321
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.20 E-value=0.00032 Score=56.73 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=70.3
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC--CCC---C
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG--RKG---W 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~--~~~---~ 138 (215)
.++++.+||-+|+|. |..+..+++..+. .+|+++|.++...+.+++ .+. +. ++..+. .+. .
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~-~~Vi~~~~~~~~~~~~~~----lGa------~~--~i~~~~~~~~~v~~~ 234 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSA-ARVIAVDLDDDRLALARE----VGA------DA--AVKSGAGAADAIREL 234 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESCHHHHHHHHH----TTC------SE--EEECSTTHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH----cCC------CE--EEcCCCcHHHHHHHH
Confidence 478899999999987 8899999988743 689999999998888764 232 11 221111 000 0
Q ss_pred CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 139 PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
.....+|+|+.........+.+.+.|+++|.+++.-
T Consensus 235 t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 235 TGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp HGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEEC
Confidence 011379999988887767889999999999998753
No 322
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=97.18 E-value=0.0012 Score=54.25 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=68.0
Q ss_pred CCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC------CCC--
Q 028002 66 LKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD------GRK-- 136 (215)
Q Consensus 66 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d------~~~-- 136 (215)
++++.+||-+|+|. |..+..+++..|. .+|++++.++...+.+++ .+. + .++... ..+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~~----lGa------~--~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGA-ENVIVIAGSPNRLKLAEE----IGA------D--LTLNRRETSVEERRKAI 259 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-SEEEEEESCHHHHHHHHH----TTC------S--EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCC-ceEEEEcCCHHHHHHHHH----cCC------c--EEEeccccCcchHHHHH
Confidence 67789999999886 8888899988752 489999999988887763 222 1 112111 000
Q ss_pred -CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 137 -GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 137 -~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.......+|+|+.........+.+.+.|+++|.++..
T Consensus 260 ~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 260 MDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred HHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 0111136999998888777888899999999998874
No 323
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=97.16 E-value=0.0033 Score=51.94 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=66.0
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC------C
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK------G 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~------~ 137 (215)
.++++.+||-+|+|. |..+..+++..|. .+|+++|.++...+.+++. +.. .++.....+ .
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~~l----Ga~--------~vi~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGA-SKVILSEPSEVRRNLAKEL----GAD--------HVIDPTKENFVEAVLD 276 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHH----TCS--------EEECTTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHc----CCC--------EEEcCCCCCHHHHHHH
Confidence 367889999999987 8889999998763 4899999999988887642 221 112111111 0
Q ss_pred CCCCCCccEEEEccCCC-CchHHHHHhc----CCCcEEEEE
Q 028002 138 WPEFAPYDAIHVGAAAP-EIPQALIDQL----KPGGRMVIP 173 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~-~~~~~~~~~L----k~gG~lv~~ 173 (215)
......+|+|+...... ...+.+.+.| +++|.+++.
T Consensus 277 ~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 277 YTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp HTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred HhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 11224699999877665 3555666666 999999885
No 324
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=97.10 E-value=0.00042 Score=56.37 Aligned_cols=95 Identities=17% Similarity=0.234 Sum_probs=66.3
Q ss_pred CC-CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC-CCCC
Q 028002 66 LK-PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW-PEFA 142 (215)
Q Consensus 66 ~~-~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~ 142 (215)
+. ++.+||-+|+|. |..+..+++..| .+|++++.++...+.+++. .+. +.+ +..+-.+.. ...+
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~~---lGa------~~v--i~~~~~~~~~~~~~ 243 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEALQD---LGA------DDY--VIGSDQAKMSELAD 243 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHHTT---SCC------SCE--EETTCHHHHHHSTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHH---cCC------cee--eccccHHHHHHhcC
Confidence 56 889999999986 888889998876 5899999998877766532 222 111 111100000 0013
Q ss_pred CccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 143 PYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 143 ~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.+|+|+.........+.+.+.|+++|.++..
T Consensus 244 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 244 SLDYVIDTVPVHHALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp TEEEEEECCCSCCCSHHHHTTEEEEEEEEEC
T ss_pred CCCEEEECCCChHHHHHHHHHhccCCEEEEe
Confidence 6999998887766778889999999998874
No 325
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.09 E-value=0.003 Score=51.52 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=67.8
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC-C----CCC--
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG-D----GRK-- 136 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~-d----~~~-- 136 (215)
.++++.+||-+|+|. |..+..+++..|. .+|+++|.++...+.+++ .+.. . ++.. + ..+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga-~~Vi~~~~~~~~~~~~~~----lGa~------~--vi~~~~~~~~~~~~v 253 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGA-SRIIGVDINKDKFARAKE----FGAT------E--CINPQDFSKPIQEVL 253 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHH----HTCS------E--EECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH----cCCc------e--EeccccccccHHHHH
Confidence 367889999999986 8888899988763 379999999998888764 2221 1 1111 1 100
Q ss_pred -CCCCCCCccEEEEccCCCCchHHHHHhcCCC-cEEEEE
Q 028002 137 -GWPEFAPYDAIHVGAAAPEIPQALIDQLKPG-GRMVIP 173 (215)
Q Consensus 137 -~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~g-G~lv~~ 173 (215)
.... +.+|+|+.........+.+.+.|+++ |.+++.
T Consensus 254 ~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 254 IEMTD-GGVDYSFECIGNVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHTT-SCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhC-CCCCEEEECCCcHHHHHHHHHhhccCCcEEEEE
Confidence 0011 37999998877666778889999999 998874
No 326
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.07 E-value=0.0016 Score=52.53 Aligned_cols=92 Identities=23% Similarity=0.198 Sum_probs=66.7
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC-CCC---
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK-GWP--- 139 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~--- 139 (215)
.++++.+||-+|+|. |..+..+++..| .+|++++.++..++.+++ .+. + .++ |..+ .+.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lGa------~--~~~--d~~~~~~~~~~ 224 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAKE----LGA------D--LVV--NPLKEDAAKFM 224 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH----TTC------S--EEE--CTTTSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH----CCC------C--EEe--cCCCccHHHHH
Confidence 378899999999975 888888888875 589999999988887753 222 1 111 1111 000
Q ss_pred ---CCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 140 ---EFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
. +.+|+|+.........+.+.+.|+++|.++..
T Consensus 225 ~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 225 KEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEe
Confidence 1 36999998877666778889999999998874
No 327
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.06 E-value=0.00014 Score=58.86 Aligned_cols=95 Identities=11% Similarity=-0.015 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcCCc-cHHHHHHHHHh--CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe-EEEe-CCCCCCCCC
Q 028002 66 LKPGMHALDIGSGT-GYLTACFALMV--GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL-SVHV-GDGRKGWPE 140 (215)
Q Consensus 66 ~~~~~~vLdiG~G~-G~~~~~l~~~~--~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v-~~~~-~d~~~~~~~ 140 (215)
+ ++.+||-+|+|. |..+..+++.. | .+|++++.++...+.+++ .+.. .+ +... .+.......
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~G--a~Vi~~~~~~~~~~~~~~----lGa~------~vi~~~~~~~~~~~~~~ 235 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKN--ITIVGISRSKKHRDFALE----LGAD------YVSEMKDAESLINKLTD 235 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHH----HTCS------EEECHHHHHHHHHHHHT
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCC--CEEEEEeCCHHHHHHHHH----hCCC------EEeccccchHHHHHhhc
Confidence 6 899999999986 88888999887 6 579999999998888764 2221 11 0000 011011111
Q ss_pred CCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 141 FAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 141 ~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
...+|+|+.........+.+.+.|+++|.++..
T Consensus 236 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 236 GLGASIAIDLVGTEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp TCCEEEEEESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCccEEEECCCChHHHHHHHHHhhcCCEEEEe
Confidence 137999998887766778889999999998874
No 328
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.05 E-value=0.00076 Score=54.71 Aligned_cols=74 Identities=11% Similarity=-0.008 Sum_probs=54.4
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCC-CeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCC---CCc
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQ-GRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEF---APY 144 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~ 144 (215)
..+|+|+.||.|.++..+.+. |.. ..+.++|+++.+++..+.++. ...++.+|+.+..... ..+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~-----------~~~~~~~Di~~~~~~~~~~~~~ 69 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFP-----------HTQLLAKTIEGITLEEFDRLSF 69 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT-----------TSCEECSCGGGCCHHHHHHHCC
T ss_pred CCeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhcc-----------ccccccCCHHHccHhHcCcCCc
Confidence 358999999999999999887 421 479999999999998887753 2346677776643210 168
Q ss_pred cEEEEccCCC
Q 028002 145 DAIHVGAAAP 154 (215)
Q Consensus 145 D~V~~~~~~~ 154 (215)
|+|+.+++++
T Consensus 70 D~l~~gpPCq 79 (343)
T 1g55_A 70 DMILMSPPCQ 79 (343)
T ss_dssp SEEEECCC--
T ss_pred CEEEEcCCCc
Confidence 9999998853
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.05 E-value=0.002 Score=52.67 Aligned_cols=96 Identities=16% Similarity=0.115 Sum_probs=67.5
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC-----CCCCC
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD-----GRKGW 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d-----~~~~~ 138 (215)
.++++.+||-+|+|. |..+..+++..|. .+|+++|.++...+.+++ .+.. .++... ..+..
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~----lGa~--------~vi~~~~~~~~~~~~v 258 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGA-SRIIAIDINGEKFPKAKA----LGAT--------DCLNPRELDKPVQDVI 258 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH----TTCS--------EEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH----hCCc--------EEEccccccchHHHHH
Confidence 367889999999986 8888999998753 479999999998887753 2221 111111 10000
Q ss_pred C--CCCCccEEEEccCCCCchHHHHHhcCCC-cEEEEE
Q 028002 139 P--EFAPYDAIHVGAAAPEIPQALIDQLKPG-GRMVIP 173 (215)
Q Consensus 139 ~--~~~~~D~V~~~~~~~~~~~~~~~~Lk~g-G~lv~~ 173 (215)
. ..+.+|+|+.........+.+.+.|+++ |.+++.
T Consensus 259 ~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 259 TELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEE
Confidence 0 0137999998877666778899999999 998874
No 330
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.05 E-value=0.0023 Score=52.33 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=67.6
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC-CCCCCC---
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD-GRKGWP--- 139 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d-~~~~~~--- 139 (215)
.++++.+||-+|+|. |..+..+++..|. .+|+++|.++..++.+++ .+. + .++... ....+.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~----lGa------~--~vi~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGA-KRIIAVDLNPDKFEKAKV----FGA------T--DFVNPNDHSEPISQVL 255 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH----TTC------C--EEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH----hCC------c--eEEeccccchhHHHHH
Confidence 467889999999986 8888899988753 379999999998887763 222 1 111111 000000
Q ss_pred ---CCCCccEEEEccCCCCchHHHHHhcCCC-cEEEEE
Q 028002 140 ---EFAPYDAIHVGAAAPEIPQALIDQLKPG-GRMVIP 173 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~~~~~~~~~~~Lk~g-G~lv~~ 173 (215)
..+.+|+|+.........+.+.+.|+++ |.+++.
T Consensus 256 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 256 SKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEE
Confidence 0137999998877666778899999999 998874
No 331
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.02 E-value=0.0033 Score=50.28 Aligned_cols=95 Identities=19% Similarity=0.181 Sum_probs=66.3
Q ss_pred cCCCCCEEEEEc-CCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC------
Q 028002 65 NLKPGMHALDIG-SGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK------ 136 (215)
Q Consensus 65 ~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~------ 136 (215)
.++++.+||-.| +|. |..+..+++..| .+|++++.++..++.+++ .+. + .++.....+
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga------~--~~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAKA----LGA------W--ETIDYSHEDVAKRVL 202 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH----HTC------S--EEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCC------C--EEEeCCCccHHHHHH
Confidence 367889999999 554 888888888876 589999999998887764 221 1 111111111
Q ss_pred CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 137 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
.......+|+|+.+... .....+.+.|+++|.+++.-
T Consensus 203 ~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 203 ELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp HHTTTCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECC
T ss_pred HHhCCCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEe
Confidence 00122479999987765 56778899999999998853
No 332
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.01 E-value=0.00018 Score=71.80 Aligned_cols=99 Identities=14% Similarity=0.199 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCC----CCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC-CCCC
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGP----QGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG-WPEF 141 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~----~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 141 (215)
.+..+|||+|.|+|..+..+.+.++. ..+++..|+|+...+.+++++... .++...-|..+. ....
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---------di~~~~~d~~~~~~~~~ 1309 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---------HVTQGQWDPANPAPGSL 1309 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------TEEEECCCSSCCCC---
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------ccccccccccccccCCC
Confidence 45789999999999887777766542 247999999998888888777542 222211122111 1123
Q ss_pred CCccEEEEccCCC------CchHHHHHhcCCCcEEEEEe
Q 028002 142 APYDAIHVGAAAP------EIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 142 ~~~D~V~~~~~~~------~~~~~~~~~Lk~gG~lv~~~ 174 (215)
+.||+|++...++ ..+.+++++|||||+|++..
T Consensus 1310 ~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1310 GKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp --CCEEEEECC--------------------CCEEEEEE
T ss_pred CceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 5799999887765 34567889999999998853
No 333
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.98 E-value=0.0019 Score=52.51 Aligned_cols=95 Identities=16% Similarity=0.090 Sum_probs=64.7
Q ss_pred CCCC------CEEEEEcCCc-cHHH-HHHH-HHhCCCCeEEEEecChH---HHHHHHHHHHhhcccCcccCCCeEEEeCC
Q 028002 66 LKPG------MHALDIGSGT-GYLT-ACFA-LMVGPQGRAVGVEHIPE---LVVSSIQNIEKSAAAPLLKEGSLSVHVGD 133 (215)
Q Consensus 66 ~~~~------~~vLdiG~G~-G~~~-~~l~-~~~~~~~~v~~~D~s~~---~~~~a~~~~~~~~~~~~~~~~~v~~~~~d 133 (215)
++++ .+||-+|+|. |..+ ..++ +..|. .+|++++.++. ..+.+++ .+. +.++....+
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga-~~Vi~~~~~~~~~~~~~~~~~----lGa------~~v~~~~~~ 232 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGY-ENLYCLGRRDRPDPTIDIIEE----LDA------TYVDSRQTP 232 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCC-CEEEEEECCCSSCHHHHHHHH----TTC------EEEETTTSC
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCC-cEEEEEeCCcccHHHHHHHHH----cCC------cccCCCccC
Confidence 6788 9999999976 7888 8888 77653 34999999887 7777753 222 111000001
Q ss_pred CCC--CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 134 GRK--GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 134 ~~~--~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
..+ .. . +.+|+|+.........+.+.+.|+++|.++..
T Consensus 233 ~~~i~~~-~-gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 233 VEDVPDV-Y-EQMDFIYEATGFPKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp GGGHHHH-S-CCEEEEEECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHh-C-CCCCEEEECCCChHHHHHHHHHHhcCCEEEEE
Confidence 111 01 1 37999998877666678889999999998874
No 334
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.98 E-value=0.00095 Score=54.49 Aligned_cols=95 Identities=23% Similarity=0.316 Sum_probs=65.5
Q ss_pred CC-CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC-CCCC
Q 028002 66 LK-PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW-PEFA 142 (215)
Q Consensus 66 ~~-~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~ 142 (215)
+. ++.+||-+|+|. |..+..+++..| .+|++++.++...+.+++.+ +. + .++...-.+.. ...+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~l---Ga------~--~v~~~~~~~~~~~~~~ 250 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSKKEEALKNF---GA------D--SFLVSRDQEQMQAAAG 250 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGHHHHHHTS---CC------S--EEEETTCHHHHHHTTT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhc---CC------c--eEEeccCHHHHHHhhC
Confidence 56 889999999886 888888888876 58999999988777665332 21 1 11111100000 0014
Q ss_pred CccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 143 PYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 143 ~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.+|+|+.........+.+.+.|+++|.++..
T Consensus 251 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 251 TLDGIIDTVSAVHPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp CEEEEEECCSSCCCSHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCcHHHHHHHHHHHhcCCEEEEE
Confidence 6999998887766678889999999998874
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.98 E-value=0.0034 Score=51.30 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=67.4
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC-----CCC--
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD-----GRK-- 136 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d-----~~~-- 136 (215)
.++++.+||-+|+|. |..+..+++..|. .+|++++.++...+.+++ .+.. .++... ..+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~----lGa~--------~vi~~~~~~~~~~~~~ 254 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGA-ARIIGVDINKDKFAKAKE----VGAT--------ECVNPQDYKKPIQEVL 254 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH----TTCS--------EEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH----hCCc--------eEecccccchhHHHHH
Confidence 467889999999987 8888899988753 379999999998887753 2221 111111 100
Q ss_pred -CCCCCCCccEEEEccCCCCchHHHHHhcCCC-cEEEEE
Q 028002 137 -GWPEFAPYDAIHVGAAAPEIPQALIDQLKPG-GRMVIP 173 (215)
Q Consensus 137 -~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~g-G~lv~~ 173 (215)
.... +.+|+|+.........+.+.+.|+++ |.+++.
T Consensus 255 ~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 255 TEMSN-GGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHTT-SCBSEEEECSCCHHHHHHHHHHBCTTTCEEEEC
T ss_pred HHHhC-CCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEe
Confidence 0011 37999998877666778889999999 998874
No 336
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.98 E-value=0.00062 Score=55.03 Aligned_cols=100 Identities=20% Similarity=0.161 Sum_probs=66.9
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC---CCC
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG---WPE 140 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~ 140 (215)
..+++.+||-+|+|. |.++..+++..+. .+|+++|.+++.++.+++ .+.. .-++....|..+. ...
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g-~~Vi~~~~~~~r~~~~~~----~Ga~-----~~i~~~~~~~~~~v~~~t~ 229 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFG-AKVIAVDINQDKLNLAKK----IGAD-----VTINSGDVNPVDEIKKITG 229 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSC-CEEEEEESCHHHHHHHHH----TTCS-----EEEEC-CCCHHHHHHHHTT
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCC-CEEEEEECcHHHhhhhhh----cCCe-----EEEeCCCCCHHHHhhhhcC
Confidence 378899999999997 5666677766543 789999999988777654 2221 1111111121110 112
Q ss_pred CCCccEEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 141 FAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 141 ~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
...+|.++.............+.|+++|.+++..
T Consensus 230 g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp SSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCceEEEEeccCcchhheeheeecCCceEEEEe
Confidence 2467888887777777888999999999988753
No 337
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.94 E-value=0.0043 Score=50.55 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=65.4
Q ss_pred CCCEEEEEc-CCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC--CCC---CCCCC
Q 028002 68 PGMHALDIG-SGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG--DGR---KGWPE 140 (215)
Q Consensus 68 ~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~--d~~---~~~~~ 140 (215)
++.+||-.| +|. |..+..+++.++. .+|++++.++...+.+++ .+.. . ++.. +.. ... .
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g-~~Vi~~~~~~~~~~~~~~----lGad------~--vi~~~~~~~~~v~~~-~ 236 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTD-LTVIATASRPETQEWVKS----LGAH------H--VIDHSKPLAAEVAAL-G 236 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCC-SEEEEECSSHHHHHHHHH----TTCS------E--EECTTSCHHHHHHTT-C
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHHHH----cCCC------E--EEeCCCCHHHHHHHh-c
Confidence 678999998 665 8999999987432 689999999988888754 3321 1 1111 110 011 2
Q ss_pred CCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 141 FAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 141 ~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.+.+|+|+.........+.+.++|+++|.+++.
T Consensus 237 ~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 237 LGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp SCCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred CCCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence 257999998776666778889999999999875
No 338
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.94 E-value=0.0034 Score=50.40 Aligned_cols=94 Identities=17% Similarity=0.130 Sum_probs=65.3
Q ss_pred cCCCCCEEEEEc-CCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC-----
Q 028002 65 NLKPGMHALDIG-SGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG----- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~----- 137 (215)
.++++.+||-.| +|. |..+..+++..| .+|++++.++..++.+++ .+. + .++.....+.
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga------~--~~~~~~~~~~~~~~~ 210 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAKE----YGA------E--YLINASKEDILRQVL 210 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTC------S--EEEETTTSCHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCC------c--EEEeCCCchHHHHHH
Confidence 367889999999 444 888888888876 589999999988887754 221 1 1121111110
Q ss_pred -CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 -WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 -~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+.+... ...+.+.+.|+++|.++..
T Consensus 211 ~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 211 KFTNGKGVDASFDSVGK-DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp HHTTTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCceEEEECCCh-HHHHHHHHHhccCCEEEEE
Confidence 0112469999987765 6678889999999999874
No 339
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.93 E-value=0.0025 Score=51.10 Aligned_cols=57 Identities=16% Similarity=0.233 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecCh---HHHHHHHHHHHhh
Q 028002 54 MHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIP---ELVVSSIQNIEKS 116 (215)
Q Consensus 54 ~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~---~~~~~a~~~~~~~ 116 (215)
+...++... ..++..|||..||+|..+.++.+.. .+.+|+|+++ ..++.+++++...
T Consensus 231 l~~~~i~~~---~~~~~~vlDpF~GsGtt~~aa~~~~---r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 231 VIERLVRAL---SHPGSTVLDFFAGSGVTARVAIQEG---RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHHH---SCTTCEEEETTCTTCHHHHHHHHHT---CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHHHh---CCCCCEEEecCCCCCHHHHHHHHcC---CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 555666553 5788999999999999998888773 7999999999 9999999887653
No 340
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.86 E-value=0.0041 Score=50.05 Aligned_cols=71 Identities=15% Similarity=0.099 Sum_probs=52.8
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCccEE
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYDAI 147 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~V 147 (215)
+.+++|+.||.|.++..+.+. |. ..+.++|+++.+++..+.++... . .+|+.+... ....+|+|
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~-~~v~~~e~d~~a~~t~~~N~~~~---------~----~~Di~~~~~~~~~~~D~l 75 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GA-ECVYSNEWDKYAQEVYEMNFGEK---------P----EGDITQVNEKTIPDHDIL 75 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TC-EEEEEECCCHHHHHHHHHHHSCC---------C----BSCGGGSCGGGSCCCSEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CC-eEEEEEeCCHHHHHHHHHHcCCC---------C----cCCHHHcCHhhCCCCCEE
Confidence 478999999999999999877 44 57899999999988888776321 1 466654332 11358999
Q ss_pred EEccCCC
Q 028002 148 HVGAAAP 154 (215)
Q Consensus 148 ~~~~~~~ 154 (215)
+.+++++
T Consensus 76 ~~gpPCQ 82 (327)
T 2c7p_A 76 CAGFPCQ 82 (327)
T ss_dssp EEECCCT
T ss_pred EECCCCC
Confidence 9888764
No 341
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.84 E-value=0.0034 Score=52.10 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCCccHHHHHHH-HHhCCCCeEEEEecChHHHHHHHHHHHh
Q 028002 66 LKPGMHALDIGSGTGYLTACFA-LMVGPQGRAVGVEHIPELVVSSIQNIEK 115 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 115 (215)
++++..|+|+|++.|..+..++ +..++.++|+++|+++...+..++++..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4688999999999999999988 4543337999999999999999999876
No 342
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.84 E-value=0.0023 Score=51.38 Aligned_cols=57 Identities=18% Similarity=0.185 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHh
Q 028002 53 HMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEK 115 (215)
Q Consensus 53 ~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 115 (215)
.+...++... ..++..|||..||+|..+.++.+. | .+.+|+|+++..++.+++++..
T Consensus 240 ~l~~~~i~~~---~~~~~~VlDpF~GsGtt~~aa~~~-g--r~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 240 KLPEFFIRML---TEPDDLVVDIFGGSNTTGLVAERE-S--RKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHHHHH---CCTTCEEEETTCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHc-C--CCEEEEeCCHHHHHHHHHHHHh
Confidence 3556666543 678899999999999988888776 3 7999999999999999988754
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.81 E-value=0.0038 Score=50.45 Aligned_cols=94 Identities=18% Similarity=0.122 Sum_probs=65.6
Q ss_pred CCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---C---C
Q 028002 66 LKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---G---W 138 (215)
Q Consensus 66 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~---~ 138 (215)
+ ++.+||-+|+|. |..+..+++..|. .+|++++.++...+.+++ .+.. .++..+..+ . .
T Consensus 166 ~-~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~Vi~~~~~~~~~~~~~~----~Ga~--------~~~~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 166 I-SGKSVLITGAGPLGLLGIAVAKASGA-YPVIVSEPSDFRRELAKK----VGAD--------YVINPFEEDVVKEVMDI 231 (348)
T ss_dssp C-TTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEECSCHHHHHHHHH----HTCS--------EEECTTTSCHHHHHHHH
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH----hCCC--------EEECCCCcCHHHHHHHH
Confidence 5 889999999975 8888888888752 389999999988887763 2211 111111111 0 0
Q ss_pred CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 139 PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.....+|+|+.........+.+.+.|+++|.++..
T Consensus 232 ~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 232 TDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp TTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 11136999998877666778889999999998874
No 344
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.75 E-value=0.0068 Score=46.97 Aligned_cols=107 Identities=14% Similarity=0.116 Sum_probs=67.4
Q ss_pred CCCCEEEEEcCCccHHHHHHHHH---h---CCCCeEEEEe-----cChH-------------------HHHHHHHHHHhh
Q 028002 67 KPGMHALDIGSGTGYLTACFALM---V---GPQGRAVGVE-----HIPE-------------------LVVSSIQNIEKS 116 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~---~---~~~~~v~~~D-----~s~~-------------------~~~~a~~~~~~~ 116 (215)
.-...|+|+|+-.|..+..++.. + ++..+++++| ..+. ..+...+.+...
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 34569999999999988876643 2 3458999999 2211 011122211111
Q ss_pred cccCccc--CCCeEEEeCCCCCCCC------CCCCccEEEEccCCC-C---chHHHHHhcCCCcEEEEE
Q 028002 117 AAAPLLK--EGSLSVHVGDGRKGWP------EFAPYDAIHVGAAAP-E---IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 117 ~~~~~~~--~~~v~~~~~d~~~~~~------~~~~~D~V~~~~~~~-~---~~~~~~~~Lk~gG~lv~~ 173 (215)
.....++ .++++++.+++.+.++ +..+||+|+.+.... . .++.+...|+|||++++-
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEc
Confidence 0000111 2789999999876543 224799999999752 1 345678899999999983
No 345
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.74 E-value=0.011 Score=47.68 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=66.3
Q ss_pred cCCCCCEEEEEcC--CccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---C--
Q 028002 65 NLKPGMHALDIGS--GTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---G-- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~-- 137 (215)
.++++.+||..|+ |.|..+..+++..| .+|++++.++..++.+++ .+. .. ++.....+ .
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~----~ga------~~--~~d~~~~~~~~~~~ 228 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAKA----LGA------DE--TVNYTHPDWPKEVR 228 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTC------SE--EEETTSTTHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHh----cCC------CE--EEcCCcccHHHHHH
Confidence 3678899999998 45888888888765 589999999988887753 221 11 11111000 0
Q ss_pred -CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 -WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 -~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+.... ....+.+.+.|+++|.++..
T Consensus 229 ~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 229 RLTGGKGADKVVDHTG-ALYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp HHTTTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEES
T ss_pred HHhCCCCceEEEECCC-HHHHHHHHHhhccCCEEEEE
Confidence 011247999998888 77888999999999998874
No 346
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.73 E-value=0.0051 Score=50.06 Aligned_cols=91 Identities=14% Similarity=0.082 Sum_probs=62.8
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh---HHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCC
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP---ELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAP 143 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~---~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~ 143 (215)
+.+||-+|+|. |..+..+++..| .+|++++.++ ...+.+++ .+. +.++ ..+..+... ..+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~~~----~ga------~~v~--~~~~~~~~~~~~~~ 246 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPTEVEQTVIEE----TKT------NYYN--SSNGYDKLKDSVGK 246 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCCHHHHHHHHH----HTC------EEEE--CTTCSHHHHHHHCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccchHHHHHHHH----hCC------ceec--hHHHHHHHHHhCCC
Confidence 89999999965 777888888776 4899999988 77666653 221 1111 101110000 0146
Q ss_pred ccEEEEccCCCCch-HHHHHhcCCCcEEEEE
Q 028002 144 YDAIHVGAAAPEIP-QALIDQLKPGGRMVIP 173 (215)
Q Consensus 144 ~D~V~~~~~~~~~~-~~~~~~Lk~gG~lv~~ 173 (215)
+|+|+......... +.+.+.|+++|.+++.
T Consensus 247 ~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 247 FDVIIDATGADVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEEEECCCCCTHHHHHHGGGEEEEEEEEEC
T ss_pred CCEEEECCCChHHHHHHHHHHHhcCCEEEEE
Confidence 99999988877777 8899999999998875
No 347
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.71 E-value=0.0037 Score=49.91 Aligned_cols=93 Identities=19% Similarity=0.039 Sum_probs=61.8
Q ss_pred cCCCCCEEEEEc-CCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC-CCCCC
Q 028002 65 NLKPGMHALDIG-SGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK-GWPEF 141 (215)
Q Consensus 65 ~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 141 (215)
.++++.+||-+| +|. |..+..+++..| .++++++ ++...+.+++ .+.. .++.....+ .....
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~~~~~----lGa~--------~~i~~~~~~~~~~~~ 213 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHAFLKA----LGAE--------QCINYHEEDFLLAIS 213 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHHHHHH----HTCS--------EEEETTTSCHHHHCC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHHHHHH----cCCC--------EEEeCCCcchhhhhc
Confidence 478899999997 776 999999999876 5788887 4444555543 3321 122211111 00111
Q ss_pred CCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 142 APYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 142 ~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
..+|+|+....-... ..+.++|+++|.++..
T Consensus 214 ~g~D~v~d~~g~~~~-~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 214 TPVDAVIDLVGGDVG-IQSIDCLKETGCIVSV 244 (321)
T ss_dssp SCEEEEEESSCHHHH-HHHGGGEEEEEEEEEC
T ss_pred cCCCEEEECCCcHHH-HHHHHhccCCCEEEEe
Confidence 469999987665544 7788999999999875
No 348
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.71 E-value=0.003 Score=50.92 Aligned_cols=95 Identities=19% Similarity=0.116 Sum_probs=64.6
Q ss_pred cCCCCCEEEEEcCC--ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC------
Q 028002 65 NLKPGMHALDIGSG--TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK------ 136 (215)
Q Consensus 65 ~~~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~------ 136 (215)
.++++.+||-+|+| .|..+..+++..| .+|++++.++..++.+++ .+. + .++.....+
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga------~--~~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGA------A--YVIDTSTAPLYETVM 206 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTC------S--EEEETTTSCHHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCC------c--EEEeCCcccHHHHHH
Confidence 46889999999997 4788888888876 589999999988887765 222 1 111111111
Q ss_pred CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 137 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
.......+|+|+.+........ ..+.|+++|.+++.-
T Consensus 207 ~~~~~~g~Dvvid~~g~~~~~~-~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 207 ELTNGIGADAAIDSIGGPDGNE-LAFSLRPNGHFLTIG 243 (340)
T ss_dssp HHTTTSCEEEEEESSCHHHHHH-HHHTEEEEEEEEECC
T ss_pred HHhCCCCCcEEEECCCChhHHH-HHHHhcCCCEEEEEe
Confidence 0112247999998776554434 458999999998753
No 349
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.69 E-value=0.0056 Score=45.13 Aligned_cols=95 Identities=20% Similarity=0.164 Sum_probs=61.3
Q ss_pred cCCCCCEEEEEcC--CccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC--CC---
Q 028002 65 NLKPGMHALDIGS--GTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR--KG--- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~--~~--- 137 (215)
.++++.+||..|+ |.|.....+++..| .+|++++.++...+.+++ .+. . ..+...+.. +.
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~----~g~------~-~~~d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLSR----LGV------E-YVGDSRSVDFADEILE 101 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHT----TCC------S-EEEETTCSTHHHHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH----cCC------C-EEeeCCcHHHHHHHHH
Confidence 3678899999994 34777777777655 589999999887766542 221 1 111111110 00
Q ss_pred CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+.+.. ....+.+.+.|+++|++++.
T Consensus 102 ~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 102 LTDGYGVDVVLNSLA-GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp HTTTCCEEEEEECCC-THHHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCCeEEEECCc-hHHHHHHHHHhccCCEEEEE
Confidence 011146999997765 45667889999999998874
No 350
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.68 E-value=0.0079 Score=48.48 Aligned_cols=94 Identities=19% Similarity=0.167 Sum_probs=64.7
Q ss_pred cCCCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC--CCC---C
Q 028002 65 NLKPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD--GRK---G 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d--~~~---~ 137 (215)
.++++.+||-.|+ | .|..+..+++..| .+|++++.++...+.+++. +. +. ++..+ ..+ .
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~----ga------~~--v~~~~~~~~~~v~~ 221 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKSV----GA------DI--VLPLEEGWAKAVRE 221 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHH----TC------SE--EEESSTTHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhc----CC------cE--EecCchhHHHHHHH
Confidence 3678899999997 4 3888889998876 5899999999888877652 22 11 22221 110 0
Q ss_pred CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+...... ..+.+.+.|+++|.+++.
T Consensus 222 ~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 222 ATGGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HTTTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCceEEEECCchh-HHHHHHHhhcCCCEEEEE
Confidence 11223699999877654 567889999999999875
No 351
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.66 E-value=0.008 Score=50.47 Aligned_cols=94 Identities=19% Similarity=0.167 Sum_probs=65.5
Q ss_pred cCCCCCEEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC-----
Q 028002 65 NLKPGMHALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG----- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~----- 137 (215)
.++++.+||-+|+ |. |..+..+++..| .++++++.++..++.+++ .+.. .++.....+.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~~~----lGa~--------~vi~~~~~d~~~~~~ 290 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEICRA----MGAE--------AIIDRNAEGYRFWKD 290 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCC--------EEEETTTTTCCSEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHHHh----hCCc--------EEEecCcCccccccc
Confidence 4678999999998 54 889999998876 578889889988887754 2221 1111111000
Q ss_pred ------------------CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 ------------------WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ------------------~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+..... .....+.++|+++|.+++.
T Consensus 291 ~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 291 ENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp TTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-HHHHHHHHHEEEEEEEEES
T ss_pred ccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-hhHHHHHHHhhCCcEEEEE
Confidence 0112479999877665 5677889999999999874
No 352
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.62 E-value=0.0036 Score=50.07 Aligned_cols=97 Identities=13% Similarity=0.131 Sum_probs=62.7
Q ss_pred CCCCC-EEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCC
Q 028002 66 LKPGM-HALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFA 142 (215)
Q Consensus 66 ~~~~~-~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 142 (215)
++++. +||-.|+ |. |..+..+++..| .++++++.++..++.+++ .+...-+.+.... .+..... ..+
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~---~~~~~~~-~~~ 215 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLRV----LGAKEVLAREDVM---AERIRPL-DKQ 215 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHHH----TTCSEEEECC------------C-CSC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH----cCCcEEEecCCcH---HHHHHHh-cCC
Confidence 56665 8999997 54 888899998876 579999999887777754 2321001111100 0000111 124
Q ss_pred CccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 143 PYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 143 ~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.+|+|+..... ...+.+.+.|+++|++++.
T Consensus 216 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 216 RWAAAVDPVGG-RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CEEEEEECSTT-TTHHHHHHTEEEEEEEEEC
T ss_pred cccEEEECCcH-HHHHHHHHhhccCCEEEEE
Confidence 69999887765 4677889999999998874
No 353
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.57 E-value=0.0013 Score=53.19 Aligned_cols=91 Identities=19% Similarity=0.144 Sum_probs=64.4
Q ss_pred CCCEEEEE-cCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC--CCC---CCCC
Q 028002 68 PGMHALDI-GSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD--GRK---GWPE 140 (215)
Q Consensus 68 ~~~~vLdi-G~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d--~~~---~~~~ 140 (215)
++.+||-. |+|. |..+..+++..| .+|++++.++..++.+++ .+.. . ++..+ ..+ .. .
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~------~--vi~~~~~~~~~~~~~-~ 214 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK----MGAD------I--VLNHKESLLNQFKTQ-G 214 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHH----HTCS------E--EECTTSCHHHHHHHH-T
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCc------E--EEECCccHHHHHHHh-C
Confidence 78999999 5665 888889998876 589999999988888765 2221 1 11111 000 01 2
Q ss_pred CCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 141 FAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 141 ~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
...+|+|+.........+.+.++|+++|.++..
T Consensus 215 ~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 215 IELVDYVFCTFNTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CCCEEEEEESSCHHHHHHHHHHHEEEEEEEEES
T ss_pred CCCccEEEECCCchHHHHHHHHHhccCCEEEEE
Confidence 247999998776666668889999999999764
No 354
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.54 E-value=0.0023 Score=51.13 Aligned_cols=89 Identities=11% Similarity=0.061 Sum_probs=61.4
Q ss_pred EEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC--CCCCCCCCccE
Q 028002 71 HALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR--KGWPEFAPYDA 146 (215)
Q Consensus 71 ~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~~D~ 146 (215)
+||-.|+ |. |..+..+++..| .+|++++.++...+.+++ .+.. .+ +...+.. ... ..+.+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~------~v-i~~~~~~~~~~~-~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS----LGAN------RI-LSRDEFAESRPL-EKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH----HTCS------EE-EEGGGSSCCCSS-CCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCC------EE-EecCCHHHHHhh-cCCCccE
Confidence 4999997 54 899999999876 589999999998888865 2221 11 1111111 111 1257999
Q ss_pred EEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 147 IHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 147 V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
|+.....+ ..+.+.+.|+++|+++..-
T Consensus 215 v~d~~g~~-~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 215 AIDTVGDK-VLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EEESSCHH-HHHHHHHTEEEEEEEEECC
T ss_pred EEECCCcH-HHHHHHHHHhcCCEEEEEe
Confidence 88766543 6788899999999998753
No 355
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.44 E-value=0.011 Score=46.88 Aligned_cols=76 Identities=16% Similarity=0.176 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHhCCCCe-EEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC----
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMVGPQGR-AVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE---- 140 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---- 140 (215)
.+...+++|+.||.|.++..+.+. |.... +.++|+++.+.+.-+.++ +...+..+|+.+....
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----------~~~~~~~~DI~~i~~~~i~~ 80 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----------QGKIMYVGDVRSVTQKHIQE 80 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----------TTCEEEECCGGGCCHHHHHH
T ss_pred cCCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----------CCCceeCCChHHccHHHhcc
Confidence 345679999999999999998876 44333 699999999877666553 2335667787664321
Q ss_pred CCCccEEEEccCC
Q 028002 141 FAPYDAIHVGAAA 153 (215)
Q Consensus 141 ~~~~D~V~~~~~~ 153 (215)
.+.+|+++...++
T Consensus 81 ~~~~Dll~ggpPC 93 (295)
T 2qrv_A 81 WGPFDLVIGGSPC 93 (295)
T ss_dssp TCCCSEEEECCCC
T ss_pred cCCcCEEEecCCC
Confidence 1468999888765
No 356
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.43 E-value=0.0057 Score=49.37 Aligned_cols=96 Identities=21% Similarity=0.234 Sum_probs=65.1
Q ss_pred cCCCCCEEEEEcCC--ccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC-----
Q 028002 65 NLKPGMHALDIGSG--TGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK----- 136 (215)
Q Consensus 65 ~~~~~~~vLdiG~G--~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~----- 136 (215)
.++++.+||..|+| .|..+..+++.. | .+|+++|.++...+.+++ + +. + ..+...+...
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G--a~Vi~~~~~~~~~~~~~~-~---g~------~-~~~~~~~~~~~~~~~ 233 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREEAVEAAKR-A---GA------D-YVINASMQDPLAEIR 233 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHHHHHHHHH-H---TC------S-EEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHH-h---CC------C-EEecCCCccHHHHHH
Confidence 47889999999998 367777888776 5 589999999988887754 2 21 1 1111111100
Q ss_pred CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 137 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.....+.+|+|+.+.......+.+.+.|+++|.++..
T Consensus 234 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 234 RITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp HHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEEC
T ss_pred HHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 0011047999998877655667788999999998874
No 357
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.40 E-value=0.011 Score=48.16 Aligned_cols=94 Identities=13% Similarity=0.079 Sum_probs=64.8
Q ss_pred cCCCCCEEEEEc-CCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---CC-
Q 028002 65 NLKPGMHALDIG-SGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---GW- 138 (215)
Q Consensus 65 ~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~- 138 (215)
.++++.+||-.| +|. |..+..+++..| .+|++++.++..++.+++ .+. + .++..+..+ ..
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga------~--~~~~~~~~~~~~~~~ 225 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFLKS----LGC------D--RPINYKTEPVGTVLK 225 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTC------S--EEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHH----cCC------c--EEEecCChhHHHHHH
Confidence 378899999999 454 888989998875 589999999888877764 222 1 111111111 00
Q ss_pred -CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 139 -PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 -~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.....+|+|+..... ...+.+.+.|+++|.+++.
T Consensus 226 ~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 226 QEYPEGVDVVYESVGG-AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp HHCTTCEEEEEECSCT-HHHHHHHHHEEEEEEEEEC
T ss_pred HhcCCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEE
Confidence 011469999987665 5667889999999998874
No 358
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.39 E-value=0.0027 Score=50.21 Aligned_cols=90 Identities=21% Similarity=0.298 Sum_probs=63.1
Q ss_pred CCCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe---CCCCCCCCC
Q 028002 66 LKPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV---GDGRKGWPE 140 (215)
Q Consensus 66 ~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~---~d~~~~~~~ 140 (215)
++++.+||-.|+ | .|..+..+++..| .+|++++.++...+.+++ .+. +.+ +.. .+..+..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga------~~~-~~~~~~~~~~~~~-- 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPLA----LGA------EEA-ATYAEVPERAKAW-- 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHHH----TTC------SEE-EEGGGHHHHHHHT--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHh----cCC------CEE-EECCcchhHHHHh--
Confidence 678899999998 4 4888888888875 589999999888777753 221 111 111 1111111
Q ss_pred CCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 141 FAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 141 ~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
..+|+|+. ... ...+.+.+.|+++|.++..
T Consensus 188 -~~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 188 -GGLDLVLE-VRG-KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -TSEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC
T ss_pred -cCceEEEE-CCH-HHHHHHHHhhccCCEEEEE
Confidence 46999998 655 5778889999999998864
No 359
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.38 E-value=0.016 Score=46.27 Aligned_cols=95 Identities=16% Similarity=0.178 Sum_probs=64.3
Q ss_pred cCCCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC--CC---
Q 028002 65 NLKPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR--KG--- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~--~~--- 137 (215)
.++++.+||..|+ | .|.....+++..| .+|++++.++...+.+++ + +. ...+...+.. +.
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~-~---g~-------~~~~~~~~~~~~~~~~~ 203 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTAQKAQSALK-A---GA-------WQVINYREEDLVERLKE 203 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH-H---TC-------SEEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH-c---CC-------CEEEECCCccHHHHHHH
Confidence 3678899999993 3 4777778887766 589999999888777764 2 21 1111111100 00
Q ss_pred CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+.+.. ....+.+.+.|+++|.+++.
T Consensus 204 ~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HTTTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEE
Confidence 011246999998877 67778899999999998874
No 360
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.35 E-value=0.0021 Score=52.52 Aligned_cols=93 Identities=16% Similarity=0.061 Sum_probs=60.1
Q ss_pred CCCCCEEEEEc-CCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---CCCC
Q 028002 66 LKPGMHALDIG-SGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---GWPE 140 (215)
Q Consensus 66 ~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~~~ 140 (215)
++++.+||-.| +|. |..+..+++..| .+|++++ ++...+.+++ .+. +. ++..+..+ ....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~-~~~~~~~~~~----lGa------~~--v~~~~~~~~~~~~~~ 245 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVC-SQDASELVRK----LGA------DD--VIDYKSGSVEEQLKS 245 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHHHH----TTC------SE--EEETTSSCHHHHHHT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe-ChHHHHHHHH----cCC------CE--EEECCchHHHHHHhh
Confidence 66789999999 565 888889998876 5788888 6666665532 232 11 11111100 0111
Q ss_pred CCCccEEEEccCCC-CchHHHHHhcCCCcEEEEE
Q 028002 141 FAPYDAIHVGAAAP-EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 141 ~~~~D~V~~~~~~~-~~~~~~~~~Lk~gG~lv~~ 173 (215)
...+|+|+...... .......+.|+++|.++..
T Consensus 246 ~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 246 LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEES
T ss_pred cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEe
Confidence 14699999887665 3345667889999999874
No 361
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.32 E-value=0.0029 Score=51.04 Aligned_cols=94 Identities=15% Similarity=0.097 Sum_probs=64.6
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---CCC-
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---GWP- 139 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~~- 139 (215)
.+ ++.+||-+|+|. |..+..+++..|. .+|++++.++..++.+++. . +. ++.....+ ...
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~Vi~~~~~~~~~~~~~~l--a---------~~--v~~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRASGA-GPILVSDPNPYRLAFARPY--A---------DR--LVNPLEEDLLEVVRR 226 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHTTC-CSEEEECSCHHHHGGGTTT--C---------SE--EECTTTSCHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh--H---------Hh--ccCcCccCHHHHHHH
Confidence 35 889999999976 8888888888753 3899999998877766432 1 11 11111000 000
Q ss_pred -CCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 140 -EFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 140 -~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
....+|+|+.........+.+.+.|+++|.+++.
T Consensus 227 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 227 VTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp HHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred hcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 0246999998877656778889999999998874
No 362
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.29 E-value=0.011 Score=47.60 Aligned_cols=96 Identities=17% Similarity=0.122 Sum_probs=64.2
Q ss_pred cCCCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC---CCCCCC
Q 028002 65 NLKPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD---GRKGWP 139 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d---~~~~~~ 139 (215)
.++++.+||..|+ | .|..+..+++..| .+|++++.++..++.+++.+ +. . ..+-..+ ......
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~~~---g~------~-~~~d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEKVDLLKTKF---GF------D-DAFNYKEESDLTAALK 219 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTS---CC------S-EEEETTSCSCSHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHc---CC------c-eEEecCCHHHHHHHHH
Confidence 3678899999997 4 4888888888765 58999999998877765322 21 1 1111111 100000
Q ss_pred --CCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 140 --EFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 140 --~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
..+.+|+|+.+... ...+.+.+.|+++|.+++.
T Consensus 220 ~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 220 RCFPNGIDIYFENVGG-KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHCTTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEE
Confidence 11469999988765 4677889999999999874
No 363
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.26 E-value=0.0073 Score=48.45 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=64.4
Q ss_pred cCCCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---CC-
Q 028002 65 NLKPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---GW- 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~- 138 (215)
.++++.+||-.|+ | .|..+..+++..| .+|++++.++...+.+.+.+ +. . .++.....+ ..
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~~---g~------~--~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLVEEL---GF------D--GAIDYKNEDLAAGLK 212 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTT---CC------S--EEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHc---CC------C--EEEECCCHHHHHHHH
Confidence 4788999999998 3 4888888888765 58999999998877763322 21 1 111111111 00
Q ss_pred -CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 139 -PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 -~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
...+.+|+|+.+... ...+.+.+.|+++|.+++.
T Consensus 213 ~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 213 RECPKGIDVFFDNVGG-EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHCTTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC
T ss_pred HhcCCCceEEEECCCc-chHHHHHHHHhhCCEEEEE
Confidence 012479999887664 4667888999999999874
No 364
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.25 E-value=0.022 Score=46.02 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=63.2
Q ss_pred cCCCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC------
Q 028002 65 NLKPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK------ 136 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~------ 136 (215)
.++++.+||..|+ | .|..+..+++..| .+|++++.++..++.+++ + +. + . .+..+..+
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~-~---g~------~-~-~~~~~~~~~~~~~~ 224 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLVTAGSQKKLQMAEK-L---GA------A-A-GFNYKKEDFSEATL 224 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH-H---TC------S-E-EEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH-c---CC------c-E-EEecCChHHHHHHH
Confidence 3678899999984 3 4778888887765 589999999988877743 2 21 1 1 11111111
Q ss_pred CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 137 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.......+|+|+.+.... ....+.+.|+++|.+++.
T Consensus 225 ~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 225 KFTKGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp HHTTTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEEC
T ss_pred HHhcCCCceEEEECCCch-HHHHHHHhccCCCEEEEE
Confidence 001114699999887664 567788999999998874
No 365
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=96.21 E-value=0.016 Score=46.24 Aligned_cols=95 Identities=17% Similarity=0.138 Sum_probs=63.4
Q ss_pred CCCCC-EEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC--CCCCCCCC
Q 028002 66 LKPGM-HALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG--DGRKGWPE 140 (215)
Q Consensus 66 ~~~~~-~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~--d~~~~~~~ 140 (215)
++++. +||-.|+ |. |..+..+++..| .++++++.++..++.+++ .+.. .-++.... +......
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~----lGa~-----~v~~~~~~~~~~~~~~~- 214 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLKQ----LGAS-----EVISREDVYDGTLKALS- 214 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHHH----HTCS-----EEEEHHHHCSSCCCSSC-
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCc-----EEEECCCchHHHHHHhh-
Confidence 56665 8999997 54 888889998876 579999998887777754 2221 01111011 1111111
Q ss_pred CCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 141 FAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 141 ~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.+.+|+|+..... .....+.+.|+++|++++.
T Consensus 215 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 215 KQQWQGAVDPVGG-KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCCEEEEEESCCT-HHHHHHHTTEEEEEEEEEC
T ss_pred cCCccEEEECCcH-HHHHHHHHhhcCCCEEEEE
Confidence 2469999887765 4677889999999999874
No 366
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.15 E-value=0.02 Score=46.32 Aligned_cols=95 Identities=16% Similarity=-0.003 Sum_probs=64.6
Q ss_pred cCCCCCEEEEEc-CCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC---CC
Q 028002 65 NLKPGMHALDIG-SGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG---WP 139 (215)
Q Consensus 65 ~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~ 139 (215)
.++++.+||-.| +|. |..+..+++..| .+|++++.++..++.+++ .+. + .++.....+. ..
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lGa------~--~~~~~~~~~~~~~~~ 229 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTGKCEACER----LGA------K--RGINYRSEDFAAVIK 229 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTC------S--EEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCC------C--EEEeCCchHHHHHHH
Confidence 367889999994 453 888888888876 589999999998887765 222 1 1111111110 00
Q ss_pred --CCCCccEEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 140 --EFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 140 --~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
....+|+|+.+... .....+.+.|+++|.+++..
T Consensus 230 ~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 230 AETGQGVDIILDMIGA-AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HHHSSCEEEEEESCCG-GGHHHHHHTEEEEEEEEECC
T ss_pred HHhCCCceEEEECCCH-HHHHHHHHHhccCCEEEEEE
Confidence 02479999887665 36677889999999988753
No 367
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.12 E-value=0.0084 Score=47.60 Aligned_cols=107 Identities=24% Similarity=0.252 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHH---HhCCCC--eEEEEecCh--------H-HHHHHHHHHHhhcccCcccCC--CeEEE
Q 028002 67 KPGMHALDIGSGTGYLTACFAL---MVGPQG--RAVGVEHIP--------E-LVVSSIQNIEKSAAAPLLKEG--SLSVH 130 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~---~~~~~~--~v~~~D~s~--------~-~~~~a~~~~~~~~~~~~~~~~--~v~~~ 130 (215)
++.-+|||+|-|+|........ ..++.. .++.+|..+ . ..+.....+.... .+... .+++.
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p---~~~~~~v~L~l~ 171 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVP---EYEGERLSLKVL 171 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCS---EEECSSEEEEEE
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCc---cccCCcEEEEEE
Confidence 3346899999999987654332 224544 456666432 1 1111222222111 11123 44677
Q ss_pred eCCCCCCCCC--CCCccEEEEccCCC---------CchHHHHHhcCCCcEEEEEeCC
Q 028002 131 VGDGRKGWPE--FAPYDAIHVGAAAP---------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 131 ~~d~~~~~~~--~~~~D~V~~~~~~~---------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
.+|+.+.++. ...||+|+.++-.+ .+++.+.++++|||.|..-+..
T Consensus 172 ~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaa 228 (308)
T 3vyw_A 172 LGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSS 228 (308)
T ss_dssp ESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCC
T ss_pred echHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCc
Confidence 8887654332 24799999987432 3557889999999999875443
No 368
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.11 E-value=0.03 Score=44.74 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=64.2
Q ss_pred cCCCCCEEEEEcC--CccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---C--
Q 028002 65 NLKPGMHALDIGS--GTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---G-- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~-- 137 (215)
.++++.+||-.|+ |.|.....+++..| .+|++++.++..++.+++ + +. . . ++..+..+ .
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~-~---g~------~-~-~~d~~~~~~~~~i~ 207 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEEKAETARK-L---GC------H-H-TINYSTQDFAEVVR 207 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH-H---TC------S-E-EEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH-c---CC------C-E-EEECCCHHHHHHHH
Confidence 4678899999995 34888888888765 589999999988777754 2 21 1 1 11111111 0
Q ss_pred -CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 -WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 -~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+.+... ...+.+.+.|+++|.++..
T Consensus 208 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 208 EITGGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HHHTTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEE
Confidence 0011469999988766 6678889999999998874
No 369
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.06 E-value=0.014 Score=47.13 Aligned_cols=95 Identities=15% Similarity=0.149 Sum_probs=64.3
Q ss_pred cCCCCCEEEEEcC--CccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---CC-
Q 028002 65 NLKPGMHALDIGS--GTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---GW- 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~- 138 (215)
.++++.+||..|+ |.|..+..+++..| .+|++++.++...+.+++ .+. . ..+-..+..+ ..
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~~~~~~~----~g~------~-~~~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGKEELFRS----IGG------E-VFIDFTKEKDIVGAVL 232 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTHHHHHHH----TTC------C-EEEETTTCSCHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHHH----cCC------c-eEEecCccHhHHHHHH
Confidence 3678899999998 34778888887765 589999999887776653 221 1 1111111111 00
Q ss_pred --CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 139 --PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 --~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.. +.+|+|+.+.......+.+.+.|+++|+++..
T Consensus 233 ~~~~-~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 233 KATD-GGAHGVINVSVSEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHHT-SCEEEEEECSSCHHHHHHHTTSEEEEEEEEEC
T ss_pred HHhC-CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEE
Confidence 11 26999998887666778889999999998874
No 370
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.03 E-value=0.013 Score=47.63 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=60.5
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
+.+|+-+|+|. |.....+++.+| .+|+++|.++..++.+++.... .+.....+..+.......+|+|
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~~~r~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~DvV 234 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDINVERLSYLETLFGS----------RVELLYSNSAEIETAVAEADLL 234 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHGG----------GSEEEECCHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhhCc----------eeEeeeCCHHHHHHHHcCCCEE
Confidence 47999999986 777777777765 4899999999888877654422 1212211100000000258999
Q ss_pred EEccCCCC------chHHHHHhcCCCcEEEEEe
Q 028002 148 HVGAAAPE------IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 148 ~~~~~~~~------~~~~~~~~Lk~gG~lv~~~ 174 (215)
+....... +.+...+.+++||.++-..
T Consensus 235 I~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 235 IGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp EECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred EECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 87765433 2567788999999887643
No 371
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.02 E-value=0.025 Score=45.52 Aligned_cols=94 Identities=16% Similarity=0.117 Sum_probs=62.9
Q ss_pred cCCCCCEEEEEc-CCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC---CC
Q 028002 65 NLKPGMHALDIG-SGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG---WP 139 (215)
Q Consensus 65 ~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~ 139 (215)
.++++.+||-+| +|. |..+..+++..| .+|+++ .++..++.+++ .+. +.++ ...+..+. ..
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~~~~~~----lGa------~~i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDLEYVRD----LGA------TPID-ASREPEDYAAEHT 212 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHHHHHHH----HTS------EEEE-TTSCHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHHHHHHH----cCC------CEec-cCCCHHHHHHHHh
Confidence 367889999999 454 888889998876 589999 78887777654 222 1111 00111000 01
Q ss_pred CCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 140 EFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 140 ~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
....+|+|+....- ...+.+.+.|+++|.++..
T Consensus 213 ~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 213 AGQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TTSCEEEEEESSCT-HHHHHHHHHEEEEEEEEES
T ss_pred cCCCceEEEECCCc-HHHHHHHHHHhcCCeEEEE
Confidence 12479999887663 5667888999999999874
No 372
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.01 E-value=0.02 Score=48.64 Aligned_cols=88 Identities=18% Similarity=0.088 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 66 LKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
..++.+|+-+|+|. |......++.+| .+|+++|.++...+.+++ .+ +++ .+..+.. ...
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~G--a~Viv~d~~~~~~~~A~~----~G---------a~~--~~l~e~l---~~a 330 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQG--ARVSVTEIDPINALQAMM----EG---------FDV--VTVEEAI---GDA 330 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH----TT---------CEE--CCHHHHG---GGC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cC---------CEE--ecHHHHH---hCC
Confidence 56789999999997 777777777765 589999999987766543 12 121 1111111 358
Q ss_pred cEEEEccCCCCchH-HHHHhcCCCcEEEEE
Q 028002 145 DAIHVGAAAPEIPQ-ALIDQLKPGGRMVIP 173 (215)
Q Consensus 145 D~V~~~~~~~~~~~-~~~~~Lk~gG~lv~~ 173 (215)
|+|+......+++. ...+.+|+||+++..
T Consensus 331 DvVi~atgt~~~i~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 331 DIVVTATGNKDIIMLEHIKAMKDHAILGNI 360 (494)
T ss_dssp SEEEECSSSSCSBCHHHHHHSCTTCEEEEC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCcEEEEe
Confidence 99988877766654 788999999998764
No 373
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.99 E-value=0.019 Score=45.88 Aligned_cols=71 Identities=25% Similarity=0.172 Sum_probs=52.7
Q ss_pred CEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-CCCCccEEE
Q 028002 70 MHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-EFAPYDAIH 148 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~V~ 148 (215)
++|+|+.||.|.++..+.+. |- .-+.++|+++.+++.-+.++ .-.++.+|+.+... ....+|+++
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~-~~v~a~e~d~~a~~ty~~N~------------~~~~~~~DI~~i~~~~~~~~D~l~ 66 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GF-RIICANEYDKSIWKTYESNH------------SAKLIKGDISKISSDEFPKCDGII 66 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TC-EEEEEEECCTTTHHHHHHHC------------CSEEEESCGGGCCGGGSCCCSEEE
T ss_pred CeEEEeCcCccHHHHHHHHC-CC-EEEEEEeCCHHHHHHHHHHC------------CCCcccCChhhCCHhhCCcccEEE
Confidence 47999999999999998776 44 56789999998877766553 22567788776433 224689998
Q ss_pred EccCCC
Q 028002 149 VGAAAP 154 (215)
Q Consensus 149 ~~~~~~ 154 (215)
..++++
T Consensus 67 ggpPCQ 72 (331)
T 3ubt_Y 67 GGPPSQ 72 (331)
T ss_dssp CCCCGG
T ss_pred ecCCCC
Confidence 887763
No 374
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.96 E-value=0.035 Score=45.20 Aligned_cols=92 Identities=13% Similarity=-0.004 Sum_probs=62.1
Q ss_pred CCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---CC--C
Q 028002 67 KPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---GW--P 139 (215)
Q Consensus 67 ~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~--~ 139 (215)
.++.+||-+|+ | .|..+..+++..| .+++++. ++...+.+++ .+.. .++.....+ .. .
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~~~~~~~----lGa~--------~vi~~~~~~~~~~v~~~ 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHNFDLAKS----RGAE--------EVFDYRAPNLAQTIRTY 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHHHH----TTCS--------EEEETTSTTHHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHHHHHHHH----cCCc--------EEEECCCchHHHHHHHH
Confidence 77899999999 4 4899999999876 4788875 7777776653 3321 122211111 00 0
Q ss_pred CCCCccEEEEccCCCCchHHHHHhc-CCCcEEEEE
Q 028002 140 EFAPYDAIHVGAAAPEIPQALIDQL-KPGGRMVIP 173 (215)
Q Consensus 140 ~~~~~D~V~~~~~~~~~~~~~~~~L-k~gG~lv~~ 173 (215)
..+.+|+|+.........+.+.+.| +++|+++..
T Consensus 228 t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 228 TKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp TTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEES
T ss_pred ccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEE
Confidence 1145999998877766778888889 699998874
No 375
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.90 E-value=0.0093 Score=48.88 Aligned_cols=95 Identities=17% Similarity=0.175 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
++.+|+-+|+|. |......++.+| .+|+++|.++..++.+++.+.. .+.....+..+.......+|+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G--a~V~~~d~~~~~l~~~~~~~g~----------~~~~~~~~~~~l~~~l~~aDv 234 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG--ATVTVLDINIDKLRQLDAEFCG----------RIHTRYSSAYELEGAVKRADL 234 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTT----------SSEEEECCHHHHHHHHHHCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhcCC----------eeEeccCCHHHHHHHHcCCCE
Confidence 468999999986 777777777765 4899999999887776543311 111111110000000025799
Q ss_pred EEEccCCCC------chHHHHHhcCCCcEEEEEe
Q 028002 147 IHVGAAAPE------IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 147 V~~~~~~~~------~~~~~~~~Lk~gG~lv~~~ 174 (215)
|+.....+. +.+...+.+++||+++-..
T Consensus 235 Vi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 235 VIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 987553332 2577889999999887654
No 376
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=95.82 E-value=0.0036 Score=50.84 Aligned_cols=100 Identities=10% Similarity=0.077 Sum_probs=58.8
Q ss_pred cCCCC-CEEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe-EEEe---CCCCCC
Q 028002 65 NLKPG-MHALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL-SVHV---GDGRKG 137 (215)
Q Consensus 65 ~~~~~-~~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v-~~~~---~d~~~~ 137 (215)
.++++ .+||-.|+ |. |..+..+++..| .+++++..+...++..++.+.+.+.. .+ +... .++.+.
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~------~vi~~~~~~~~~~~~~ 234 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGAT------QVITEDQNNSREFGPT 234 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCS------EEEEHHHHHCGGGHHH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCe------EEEecCccchHHHHHH
Confidence 36788 99999997 54 889999999876 46777764443211111122233321 11 1100 111111
Q ss_pred CC-----CCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 WP-----EFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ~~-----~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.. ....+|+|+......... .+.++|+++|+++..
T Consensus 235 i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 235 IKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTTCEEEEC
T ss_pred HHHHhhccCCCceEEEECCCchhHH-HHHHHhccCCEEEEe
Confidence 10 124699999877655544 678999999998874
No 377
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.81 E-value=0.017 Score=46.23 Aligned_cols=94 Identities=19% Similarity=0.210 Sum_probs=62.1
Q ss_pred cCCCCCEEEEEcC--CccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC------
Q 028002 65 NLKPGMHALDIGS--GTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK------ 136 (215)
Q Consensus 65 ~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~------ 136 (215)
.++++.+||..|+ |.|..+..+++..| .+|++++.++..++.+++ + +. ...+-..+..+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~-~---g~-------~~~~d~~~~~~~~~~~~ 208 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSDEKIAYLKQ-I---GF-------DAAFNYKTVNSLEEALK 208 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH-T---TC-------SEEEETTSCSCHHHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHh-c---CC-------cEEEecCCHHHHHHHHH
Confidence 3678899999998 34777777777755 589999999888777632 2 21 11111111011
Q ss_pred CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 137 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 137 ~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.... +.+|+++.+... ...+.+.+.|+++|++++.
T Consensus 209 ~~~~-~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 209 KASP-DGYDCYFDNVGG-EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHCT-TCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC
T ss_pred HHhC-CCCeEEEECCCh-HHHHHHHHHHhcCCEEEEE
Confidence 0011 479999988765 3467788999999999874
No 378
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.80 E-value=0.016 Score=46.61 Aligned_cols=73 Identities=14% Similarity=0.073 Sum_probs=52.5
Q ss_pred CEEEEEcCCccHHHHHHHHHhCCC-CeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC---CCCcc
Q 028002 70 MHALDIGSGTGYLTACFALMVGPQ-GRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE---FAPYD 145 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~D 145 (215)
.+++|+.||.|.++..+... |.. ..+.++|+++.+.+.-+.++. ...+..+|+.+.... ...+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~-----------~~~~~~~DI~~~~~~~~~~~~~D 71 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP-----------ETNLLNRNIQQLTPQVIKKWNVD 71 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT-----------TSCEECCCGGGCCHHHHHHTTCC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC-----------CCceeccccccCCHHHhccCCCC
Confidence 47999999999999999877 432 458899999998887766642 233556676654321 13689
Q ss_pred EEEEccCCC
Q 028002 146 AIHVGAAAP 154 (215)
Q Consensus 146 ~V~~~~~~~ 154 (215)
+++..++++
T Consensus 72 ~l~ggpPCQ 80 (333)
T 4h0n_A 72 TILMSPPCQ 80 (333)
T ss_dssp EEEECCCCC
T ss_pred EEEecCCCc
Confidence 999888764
No 379
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.76 E-value=0.029 Score=45.08 Aligned_cols=76 Identities=9% Similarity=0.016 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCC-CCeE-EEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC---CC
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGP-QGRA-VGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE---FA 142 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~-~~~v-~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~ 142 (215)
...+++|+.||.|.++..+.+. |- ...+ .++|+++.+.+.-+.++.. . +..+|+.+.... ..
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~----------~--~~~~DI~~~~~~~i~~~ 75 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKE----------E--VQVKNLDSISIKQIESL 75 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCC----------C--CBCCCTTTCCHHHHHHT
T ss_pred CCCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCC----------C--cccCChhhcCHHHhccC
Confidence 3468999999999999999876 42 2346 7999999998887777532 1 455666654321 12
Q ss_pred CccEEEEccCCCCc
Q 028002 143 PYDAIHVGAAAPEI 156 (215)
Q Consensus 143 ~~D~V~~~~~~~~~ 156 (215)
.+|+++..++++.+
T Consensus 76 ~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 76 NCNTWFMSPPCQPY 89 (327)
T ss_dssp CCCEEEECCCCTTC
T ss_pred CCCEEEecCCccCc
Confidence 68999999888766
No 380
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.76 E-value=0.032 Score=46.62 Aligned_cols=97 Identities=15% Similarity=0.032 Sum_probs=64.5
Q ss_pred cCCCCCEEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC-----
Q 028002 65 NLKPGMHALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG----- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~----- 137 (215)
.++++.+||-.|+ |. |..+..+++..| .++++++.++..++.+++ .+.. .-++....+....
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~~~~~~~~~~~----lGa~-----~~i~~~~~~~~~~~~~~~ 285 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVSSAQKEAAVRA----LGCD-----LVINRAELGITDDIADDP 285 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTCC-----CEEEHHHHTCCTTGGGCH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCC-----EEEecccccccccccccc
Confidence 4678999999997 54 888888888875 588999999888887753 2321 1111111111000
Q ss_pred -------------C--CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 138 -------------W--PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 -------------~--~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
. .....+|+|+..... ...+...+.|+++|.++..
T Consensus 286 ~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 286 RRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-HHHHHHHHHSCTTCEEEES
T ss_pred cccchhhhHHHHHHHHHhCCCceEEEECCCc-hHHHHHHHHHhcCCEEEEE
Confidence 0 002469999987665 3567788999999999885
No 381
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.64 E-value=0.027 Score=45.52 Aligned_cols=95 Identities=21% Similarity=0.141 Sum_probs=62.7
Q ss_pred cCCCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC-----
Q 028002 65 NLKPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG----- 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~----- 137 (215)
.++++.+||-.|+ | .|..+..+++..| .+|++++.++...+.+++ .+. . .++..+..+.
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga------~--~~~d~~~~~~~~~~~ 232 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEEGQKIVLQ----NGA------H--EVFNHREVNYIDKIK 232 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTC------S--EEEETTSTTHHHHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHH----cCC------C--EEEeCCCchHHHHHH
Confidence 4678899999997 3 4778888888765 589999999988776543 221 1 1111111110
Q ss_pred -CCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 138 -WPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 138 -~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
......+|+|+.+.... ......+.|+++|.+++.-
T Consensus 233 ~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 233 KYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECC
T ss_pred HHcCCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEe
Confidence 00113699998876543 4567789999999988753
No 382
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=95.60 E-value=0.018 Score=46.59 Aligned_cols=97 Identities=19% Similarity=0.169 Sum_probs=57.7
Q ss_pred cCCCCCEEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChH---HHHHHHHHHHhhcccCcccCCCe-EEE---eCCCC
Q 028002 65 NLKPGMHALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPE---LVVSSIQNIEKSAAAPLLKEGSL-SVH---VGDGR 135 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~---~~~~a~~~~~~~~~~~~~~~~~v-~~~---~~d~~ 135 (215)
.++++.+||-+|+ |. |..+..+++..|. ..+..++.++. ..+.++ +.+.. .+ +.. ..+..
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~----~lGa~------~vi~~~~~~~~~~~ 232 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLK----SLGAE------HVITEEELRRPEMK 232 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHH----HTTCS------EEEEHHHHHSGGGG
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHH----hcCCc------EEEecCcchHHHHH
Confidence 4778999999997 54 8999999998763 34555555443 233333 33321 11 100 01111
Q ss_pred CCCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 136 KGWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
......+.+|+|+....-... ....++|+++|+++..
T Consensus 233 ~~~~~~~~~Dvvid~~g~~~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 233 NFFKDMPQPRLALNCVGGKSS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp GTTSSSCCCSEEEESSCHHHH-HHHHTTSCTTCEEEEC
T ss_pred HHHhCCCCceEEEECCCcHHH-HHHHHhhCCCCEEEEE
Confidence 111111259999877664433 4578999999999875
No 383
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=95.51 E-value=0.0055 Score=49.78 Aligned_cols=93 Identities=14% Similarity=0.086 Sum_probs=62.1
Q ss_pred cCCCCCEEEEEcCCc-cHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC--C---C
Q 028002 65 NLKPGMHALDIGSGT-GYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR--K---G 137 (215)
Q Consensus 65 ~~~~~~~vLdiG~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~--~---~ 137 (215)
.++++.+||-+|+|. |..+..+++.. | .+|+++|.++..++.+++ .+.. . ++...-. + .
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~G--a~Vi~~~~~~~~~~~~~~----lGa~------~--vi~~~~~~~~~v~~ 248 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTP--ATVIALDVKEEKLKLAER----LGAD------H--VVDARRDPVKQVME 248 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCC--CEEEEEESSHHHHHHHHH----TTCS------E--EEETTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEeCCHHHHHHHHH----hCCC------E--EEeccchHHHHHHH
Confidence 478899999999986 88888889887 6 589999999988887753 2221 1 1111100 0 0
Q ss_pred CCCCCCccEEEEccCCCC--chHHHHHhcCCCcEEEEE
Q 028002 138 WPEFAPYDAIHVGAAAPE--IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 ~~~~~~~D~V~~~~~~~~--~~~~~~~~Lk~gG~lv~~ 173 (215)
......+|+|+....... ..+.+.+. ++|.++..
T Consensus 249 ~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 249 LTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp HTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEEC
T ss_pred HhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEE
Confidence 111137999998876653 45555555 89988874
No 384
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.42 E-value=0.1 Score=36.02 Aligned_cols=93 Identities=15% Similarity=0.031 Sum_probs=59.0
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC--C--CCCC
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW--P--EFAP 143 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--~--~~~~ 143 (215)
..+|+-+|+|. |......+...| ..|+++|.++..++.+++ ..+.++.+|..+.. . ....
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~~~~-------------~g~~~i~gd~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRTRVDELRE-------------RGVRAVLGNAANEEIMQLAHLEC 71 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHH-------------TTCEEEESCTTSHHHHHHTTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHH-------------cCCCEEECCCCCHHHHHhcCccc
Confidence 45799999976 544443333323 689999999998776653 25667888876521 1 1246
Q ss_pred ccEEEEccCCCCch---HHHHHhcCCCcEEEEEeCC
Q 028002 144 YDAIHVGAAAPEIP---QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 144 ~D~V~~~~~~~~~~---~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|.|++..+..... -...+.+.|+..++.-..+
T Consensus 72 ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 72 AKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEESS
T ss_pred CCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 89888776553311 2345667788887765544
No 385
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.26 E-value=0.021 Score=46.55 Aligned_cols=94 Identities=15% Similarity=0.125 Sum_probs=56.8
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
+.+|+-+|+|. |......++..| .+|+++|.++..++.+++.+. ..+.....+..+.......+|+|
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G--a~V~~~d~~~~~~~~~~~~~g----------~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG--AQVTILDVNHKRLQYLDDVFG----------GRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTT----------TSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHhcC----------ceEEEecCCHHHHHHHHhCCCEE
Confidence 57999999975 666666666655 589999999987776654321 12211111110000000257999
Q ss_pred EEccCCCC------chHHHHHhcCCCcEEEEEe
Q 028002 148 HVGAAAPE------IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 148 ~~~~~~~~------~~~~~~~~Lk~gG~lv~~~ 174 (215)
+....... +.+...+.+++||.++...
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 87765442 3577888999999877643
No 386
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.13 E-value=0.01 Score=52.56 Aligned_cols=108 Identities=19% Similarity=0.176 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhC------C-----CCeEEEEecChHHHHHHHH--------------HHHhhccc-C
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVG------P-----QGRAVGVEHIPELVVSSIQ--------------NIEKSAAA-P 120 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~------~-----~~~v~~~D~s~~~~~~a~~--------------~~~~~~~~-~ 120 (215)
++.-+|+|+|.|+|...+.+.+.+. | ..+++.+|..+-..+..++ .+..+... +
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 3446899999999998887766431 1 1468999985533333332 22222110 0
Q ss_pred c-----cc--CCCeEEEeCCCCCCCCC-----CCCccEEEEccCCC---------CchHHHHHhcCCCcEEEEEe
Q 028002 121 L-----LK--EGSLSVHVGDGRKGWPE-----FAPYDAIHVGAAAP---------EIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 121 ~-----~~--~~~v~~~~~d~~~~~~~-----~~~~D~V~~~~~~~---------~~~~~~~~~Lk~gG~lv~~~ 174 (215)
. +. .-.+++..+|+.+.++. ...+|.++.++-.+ .++..+.+++++||.+....
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 0 11 12567888888654332 26799999987542 34567889999999877643
No 387
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.12 E-value=0.043 Score=44.29 Aligned_cols=95 Identities=15% Similarity=0.206 Sum_probs=62.7
Q ss_pred cCCCC--CEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC----
Q 028002 65 NLKPG--MHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---- 136 (215)
Q Consensus 65 ~~~~~--~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---- 136 (215)
.++++ .+||-.|+ | .|..+..+++..|. .+|++++.++...+.+++.+ +. . .++.....+
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga-~~Vi~~~~~~~~~~~~~~~~---g~------~--~~~d~~~~~~~~~ 222 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGC-SRVVGICGTHEKCILLTSEL---GF------D--AAINYKKDNVAEQ 222 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTS---CC------S--EEEETTTSCHHHH
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHHHc---CC------c--eEEecCchHHHHH
Confidence 37788 99999998 3 37777788877652 38999999988777665422 21 1 111111111
Q ss_pred --CCCCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 137 --GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 137 --~~~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.... +.+|+|+.+... ...+.+.+.|+++|++++.
T Consensus 223 ~~~~~~-~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 223 LRESCP-AGVDVYFDNVGG-NISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHCT-TCEEEEEESCCH-HHHHHHHHTEEEEEEEEEC
T ss_pred HHHhcC-CCCCEEEECCCH-HHHHHHHHHhccCcEEEEE
Confidence 0011 269999887764 5567888999999999874
No 388
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.87 E-value=0.17 Score=39.70 Aligned_cols=89 Identities=10% Similarity=0.071 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe-CCCCCCCCCCCCcc
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV-GDGRKGWPEFAPYD 145 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~~D 145 (215)
.+.+|+-+|+|. |......++.+| .+|+++|.++...+.+. ..+ +.... .+..+.. ...|
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~----~~g---------~~~~~~~~l~~~l---~~aD 215 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALG--AKVKVGARESDLLARIA----EMG---------MEPFHISKAAQEL---RDVD 215 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTT---------SEEEEGGGHHHHT---TTCS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHH----HCC---------CeecChhhHHHHh---cCCC
Confidence 478999999986 666656666655 58999999987544332 211 22221 1111111 4689
Q ss_pred EEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 146 AIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
+|+...+..-+.+.....+++|+.++-..
T Consensus 216 vVi~~~p~~~i~~~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 216 VCINTIPALVVTANVLAEMPSHTFVIDLA 244 (293)
T ss_dssp EEEECCSSCCBCHHHHHHSCTTCEEEECS
T ss_pred EEEECCChHHhCHHHHHhcCCCCEEEEec
Confidence 99988877655567788899998776543
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.86 E-value=0.11 Score=37.47 Aligned_cols=93 Identities=15% Similarity=0.125 Sum_probs=54.7
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC--C--C-CC
Q 028002 69 GMHALDIGSGT-GYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG--W--P-EF 141 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~--~-~~ 141 (215)
+++|+-+|+|. |......+... | .+|+++|.++..++.+++ ..+.++.+|..+. + . ..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~~~~~~~~-------------~g~~~~~gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREEAAQQHRS-------------EGRNVISGDATDPDFWERILDT 103 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHHHHHHHHH-------------TTCCEEECCTTCHHHHHTBCSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHHHHHHHHH-------------CCCCEEEcCCCCHHHHHhccCC
Confidence 56899999875 54443333332 3 689999999987665542 2344566665431 1 1 12
Q ss_pred CCccEEEEccCCCCchH---HHHHhcCCCcEEEEEeCC
Q 028002 142 APYDAIHVGAAAPEIPQ---ALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 142 ~~~D~V~~~~~~~~~~~---~~~~~Lk~gG~lv~~~~~ 176 (215)
..+|+|+...+...... ...+.+.|++.++....+
T Consensus 104 ~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 104 GHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp CCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 56899887655433222 234556667777775544
No 390
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.81 E-value=0.17 Score=41.80 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHH
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQ 111 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~ 111 (215)
++.+|+-+|+|. |.....+++.+| .+|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG--AVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH
Confidence 468999999997 888888888776 589999999988777754
No 391
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.66 E-value=0.19 Score=39.59 Aligned_cols=89 Identities=11% Similarity=0.059 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe-CCCCCCCCCCCCcc
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV-GDGRKGWPEFAPYD 145 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~~D 145 (215)
.+.+|+-+|+|. |......++.+| .+|+++|.++...+.+.+ .+ +.... .+..+.. ...|
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~d~~~~~~~~~~~----~g---------~~~~~~~~l~~~l---~~aD 217 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALG--ANVKVGARSSAHLARITE----MG---------LVPFHTDELKEHV---KDID 217 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TT---------CEEEEGGGHHHHS---TTCS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH----CC---------CeEEchhhHHHHh---hCCC
Confidence 468999999986 665555555555 589999999865443321 11 22221 1211111 4689
Q ss_pred EEEEccCCCCchHHHHHhcCCCcEEEEEe
Q 028002 146 AIHVGAAAPEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 146 ~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
+|+...+..-+.+.....+++|+.++=..
T Consensus 218 vVi~~~p~~~i~~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 218 ICINTIPSMILNQTVLSSMTPKTLILDLA 246 (300)
T ss_dssp EEEECCSSCCBCHHHHTTSCTTCEEEECS
T ss_pred EEEECCChhhhCHHHHHhCCCCCEEEEEe
Confidence 99988887655567788899988776543
No 392
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.61 E-value=0.12 Score=42.92 Aligned_cols=88 Identities=11% Similarity=0.058 Sum_probs=58.7
Q ss_pred CCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 66 LKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
.-.+.+|+-+|+|. |......++.+| .+|+++|.++.....+.. . ...+ .+..+.. ...
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~G--a~Viv~D~dp~ra~~A~~----~---------G~~v--~~Leeal---~~A 276 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMG--SIVYVTEIDPICALQACM----D---------GFRL--VKLNEVI---RQV 276 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH----T---------TCEE--CCHHHHT---TTC
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCChhhhHHHHH----c---------CCEe--ccHHHHH---hcC
Confidence 34688999999997 777777777766 589999999865444321 1 1111 1222211 357
Q ss_pred cEEEEccCCCCch-HHHHHhcCCCcEEEEE
Q 028002 145 DAIHVGAAAPEIP-QALIDQLKPGGRMVIP 173 (215)
Q Consensus 145 D~V~~~~~~~~~~-~~~~~~Lk~gG~lv~~ 173 (215)
|+|+......+++ .+....+|+|++++-.
T Consensus 277 DIVi~atgt~~lI~~e~l~~MK~gailINv 306 (435)
T 3gvp_A 277 DIVITCTGNKNVVTREHLDRMKNSCIVCNM 306 (435)
T ss_dssp SEEEECSSCSCSBCHHHHHHSCTTEEEEEC
T ss_pred CEEEECCCCcccCCHHHHHhcCCCcEEEEe
Confidence 9988866556655 4888999999877654
No 393
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.55 E-value=0.04 Score=46.60 Aligned_cols=77 Identities=16% Similarity=0.061 Sum_probs=52.4
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC---------
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--------- 139 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--------- 139 (215)
..+++|+.||.|+++..+.+. |. ..+.++|+++.+++.-+.++... +...++.+|+.+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~-~~v~avE~d~~A~~ty~~N~~~~--------p~~~~~~~DI~~i~~~~~~~~~~~ 157 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GG-QCVFTSEWNKHAVRTYKANHYCD--------PATHHFNEDIRDITLSHQEGVSDE 157 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TE-EEEEEECCCHHHHHHHHHHSCCC--------TTTCEEESCTHHHHCTTCTTSCHH
T ss_pred cceEEEecCCccHHHHHHHHC-CC-EEEEEEeCCHHHHHHHHHhcccC--------CCcceeccchhhhhhccccccchh
Confidence 468999999999999998776 43 45899999998877666554210 233455666654221
Q ss_pred --------CCCCccEEEEccCCCC
Q 028002 140 --------EFAPYDAIHVGAAAPE 155 (215)
Q Consensus 140 --------~~~~~D~V~~~~~~~~ 155 (215)
....+|+|+..++++.
T Consensus 158 ~~~~~i~~~~~~~Dvl~gGpPCQ~ 181 (482)
T 3me5_A 158 AAAEHIRQHIPEHDVLLAGFPCQP 181 (482)
T ss_dssp HHHHHHHHHSCCCSEEEEECCCCC
T ss_pred hHHhhhhhcCCCCCEEEecCCCcc
Confidence 1135899988877643
No 394
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.51 E-value=0.38 Score=39.34 Aligned_cols=91 Identities=22% Similarity=0.308 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC----CCCC-----
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD----GRKG----- 137 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d----~~~~----- 137 (215)
++.+|+-+|+|. |..+..+++.+| .+|+++|.++..++.+++ + +. ++...+ ....
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~-l---Ga---------~~~~l~~~~~~~~gya~~~ 247 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG--AKTTGYDVRPEVAEQVRS-V---GA---------QWLDLGIDAAGEGGYAREL 247 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHH-T---TC---------EECCCC-------------
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH-c---CC---------eEEeccccccccccchhhh
Confidence 467999999997 888888888776 589999999988777654 1 11 111100 0000
Q ss_pred -----------C-CCCCCccEEEEccCC-----CC-chHHHHHhcCCCcEEEEE
Q 028002 138 -----------W-PEFAPYDAIHVGAAA-----PE-IPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 138 -----------~-~~~~~~D~V~~~~~~-----~~-~~~~~~~~Lk~gG~lv~~ 173 (215)
+ ......|+|+..... +. +-++..+.+|||++++=.
T Consensus 248 ~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 248 SEAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred hHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 0 001468999876422 23 347899999998877753
No 395
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.49 E-value=0.057 Score=43.45 Aligned_cols=89 Identities=13% Similarity=0.022 Sum_probs=57.9
Q ss_pred CEEEEE-cCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC---C---CCC
Q 028002 70 MHALDI-GSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG---W---PEF 141 (215)
Q Consensus 70 ~~vLdi-G~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~---~~~ 141 (215)
.+||-. |+|. |..+..+++..| .+|++++.++..++.+++ .+. + .++..+..+. . ...
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----~Ga------~--~~~~~~~~~~~~~v~~~~~~ 231 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG--FRPIVTVRRDEQIALLKD----IGA------A--HVLNEKAPDFEATLREVMKA 231 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESCGGGHHHHHH----HTC------S--EEEETTSTTHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCC------C--EEEECCcHHHHHHHHHHhcC
Confidence 566654 5654 888888888876 589999999988887764 222 1 1222111110 0 001
Q ss_pred CCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 142 APYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 142 ~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
..+|+|+....... ...+.+.|+++|.+++.
T Consensus 232 ~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 232 EQPRIFLDAVTGPL-ASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HCCCEEEESSCHHH-HHHHHHHSCTTCEEEEC
T ss_pred CCCcEEEECCCChh-HHHHHhhhcCCCEEEEE
Confidence 36999998766543 36788999999999885
No 396
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=94.34 E-value=0.083 Score=43.90 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=45.9
Q ss_pred CcccchhHHHHHH--------HHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhC---C-CCeEEEEecChHHHHHHHHHH
Q 028002 46 NATISAPHMHATC--------LQLLEENLKPGMHALDIGSGTGYLTACFALMVG---P-QGRAVGVEHIPELVVSSIQNI 113 (215)
Q Consensus 46 ~~~~~~~~~~~~~--------l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~-~~~v~~~D~s~~~~~~a~~~~ 113 (215)
|.++++|++...+ .+.+. ... ...|+|+|+|+|.++..+++.+. + ..+++.+|+|+...+.=++++
T Consensus 109 GDFiTAPeiS~~FGe~la~~~~~~~~-~~g-~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L 186 (432)
T 4f3n_A 109 SDFVTAPELSPLFAQTLARPVAQALD-ASG-TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETL 186 (432)
T ss_dssp -CCSSCGGGHHHHHHHHHHHHHHHHH-HHT-CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHH
T ss_pred CCccCchhhhHHHHHHHHHHHHHHHH-hcC-CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHH
Confidence 5567777744322 22222 122 47999999999999988876542 1 247999999999887777776
Q ss_pred Hh
Q 028002 114 EK 115 (215)
Q Consensus 114 ~~ 115 (215)
..
T Consensus 187 ~~ 188 (432)
T 4f3n_A 187 GA 188 (432)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 397
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.17 E-value=0.098 Score=42.85 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHH
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQ 111 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~ 111 (215)
++.+|+-+|+|. |..+..+++.+| .+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 478999999997 888888888876 479999999887666643
No 398
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=94.12 E-value=0.014 Score=47.21 Aligned_cols=93 Identities=16% Similarity=0.074 Sum_probs=54.5
Q ss_pred cCCCCCEEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCC--CCCCC--
Q 028002 65 NLKPGMHALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGD--GRKGW-- 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d--~~~~~-- 138 (215)
.++++.+||-.|+ |. |..+..+++..+. .+|++++ ++...+.++ .+. +. ++..+ ..+..
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~-~~V~~~~-~~~~~~~~~-----~ga------~~--~~~~~~~~~~~~~~ 203 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVPN-VTVFGTA-STFKHEAIK-----DSV------TH--LFDRNADYVQEVKR 203 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTSTT-CEEEEEE-CGGGHHHHG-----GGS------SE--EEETTSCHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-cEEEEeC-CHHHHHHHH-----cCC------cE--EEcCCccHHHHHHH
Confidence 4678999999998 43 7788888876542 6788888 444444433 222 11 11111 10000
Q ss_pred CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 139 PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
...+.+|+|+....-..+ +.+.++|+++|++++.
T Consensus 204 ~~~~g~Dvv~d~~g~~~~-~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 204 ISAEGVDIVLDCLCGDNT-GKGLSLLKPLGTYILY 237 (349)
T ss_dssp HCTTCEEEEEEECC--------CTTEEEEEEEEEE
T ss_pred hcCCCceEEEECCCchhH-HHHHHHhhcCCEEEEE
Confidence 012579999977665544 6788999999999875
No 399
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.88 E-value=0.081 Score=43.66 Aligned_cols=41 Identities=22% Similarity=0.286 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHH
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSI 110 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~ 110 (215)
++.+|+-+|+|. |..+..+++.+| .+|+++|.++...+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 468999999997 888888888776 58999999998776653
No 400
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.69 E-value=0.14 Score=47.17 Aligned_cols=74 Identities=19% Similarity=0.180 Sum_probs=50.6
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCC------------CC
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDG------------RK 136 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~------------~~ 136 (215)
..+++|+.||.|+++..+... |....+.++|+++.+.+.-+.|+. ...++.+|+ ..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~p-----------~~~~~~~DI~~l~~~~~~~di~~ 607 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNNP-----------GSTVFTEDCNILLKLVMAGETTN 607 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHCT-----------TSEEECSCHHHHHHHHHHTCSBC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC-----------CCccccccHHHHhhhccchhhhh
Confidence 458999999999999999877 431358899999998877665542 233343332 11
Q ss_pred ----CCCCCCCccEEEEccCCC
Q 028002 137 ----GWPEFAPYDAIHVGAAAP 154 (215)
Q Consensus 137 ----~~~~~~~~D~V~~~~~~~ 154 (215)
..+..+.+|+|+..++++
T Consensus 608 ~~~~~lp~~~~vDll~GGpPCQ 629 (1002)
T 3swr_A 608 SRGQRLPQKGDVEMLCGGPPCQ 629 (1002)
T ss_dssp TTCCBCCCTTTCSEEEECCCCT
T ss_pred hhhhhcccCCCeeEEEEcCCCc
Confidence 122235799999888764
No 401
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.63 E-value=0.058 Score=47.51 Aligned_cols=107 Identities=19% Similarity=0.159 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh------CC-----CCeEEEEec---ChHHHHHHH-----------HHHHhhccc-Cc
Q 028002 68 PGMHALDIGSGTGYLTACFALMV------GP-----QGRAVGVEH---IPELVVSSI-----------QNIEKSAAA-PL 121 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~------~~-----~~~v~~~D~---s~~~~~~a~-----------~~~~~~~~~-~~ 121 (215)
+.-+|+|+|-|+|.......+.. .| .-.++++|. +.+.+..+- +.+..+... +.
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34589999999999887765543 11 136899998 555554322 222222110 00
Q ss_pred -----cc--CCCeEEEeCCCCCCCCC-----CCCccEEEEccCC---------CCchHHHHHhcCCCcEEEEEe
Q 028002 122 -----LK--EGSLSVHVGDGRKGWPE-----FAPYDAIHVGAAA---------PEIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 122 -----~~--~~~v~~~~~d~~~~~~~-----~~~~D~V~~~~~~---------~~~~~~~~~~Lk~gG~lv~~~ 174 (215)
+. .-.+++..+|+.+.++. ...||.|+.++-. ..++..+.++++|||.+...+
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 00 12456777877653331 2579999998743 234577899999999987643
No 402
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.59 E-value=0.32 Score=39.90 Aligned_cols=44 Identities=20% Similarity=0.162 Sum_probs=33.8
Q ss_pred CEEEEEcCCccHHHHHHHHHhC------CCCeEEEEecChHHHHHHHHHH
Q 028002 70 MHALDIGSGTGYLTACFALMVG------PQGRAVGVEHIPELVVSSIQNI 113 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~~~------~~~~v~~~D~s~~~~~~a~~~~ 113 (215)
-.|+|+|+|+|.++..+++.+. ...+++.+|.|+...+.=++.+
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 4799999999999998876542 1248999999998877544444
No 403
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=93.35 E-value=0.29 Score=40.89 Aligned_cols=88 Identities=15% Similarity=0.047 Sum_probs=58.7
Q ss_pred CCCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCc
Q 028002 66 LKPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPY 144 (215)
Q Consensus 66 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (215)
.-.+.+|+-+|+|. |......++.+| .+|+++|.++.....+.. ..+.+. +..+.. ...
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafG--a~Viv~d~dp~~a~~A~~-------------~G~~vv--~LeElL---~~A 303 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAG--ARVKVTEVDPICALQAAM-------------DGFEVV--TLDDAA---STA 303 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHH-------------TTCEEC--CHHHHG---GGC
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCC--CEEEEEeCCcchhhHHHh-------------cCceec--cHHHHH---hhC
Confidence 45678999999997 777777777665 689999998865433321 122221 111111 357
Q ss_pred cEEEEccCCCCch-HHHHHhcCCCcEEEEE
Q 028002 145 DAIHVGAAAPEIP-QALIDQLKPGGRMVIP 173 (215)
Q Consensus 145 D~V~~~~~~~~~~-~~~~~~Lk~gG~lv~~ 173 (215)
|+|+......+++ .+....+|+|++|+-.
T Consensus 304 DIVv~atgt~~lI~~e~l~~MK~GAILINv 333 (464)
T 3n58_A 304 DIVVTTTGNKDVITIDHMRKMKDMCIVGNI 333 (464)
T ss_dssp SEEEECCSSSSSBCHHHHHHSCTTEEEEEC
T ss_pred CEEEECCCCccccCHHHHhcCCCCeEEEEc
Confidence 9988776666665 6788999999987653
No 404
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.17 E-value=0.18 Score=35.42 Aligned_cols=96 Identities=16% Similarity=0.015 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC--C--CCC
Q 028002 67 KPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG--W--PEF 141 (215)
Q Consensus 67 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~--~~~ 141 (215)
.++.+|+-+|+|. |......+...| .+|+++|.++..++.+++ . ....++.++..+. + ...
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~~~~~~~~~---~---------~g~~~~~~d~~~~~~l~~~~~ 82 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNEYAFHRLNS---E---------FSGFTVVGDAAEFETLKECGM 82 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGGGGSCT---T---------CCSEEEESCTTSHHHHHTTTG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHh---c---------CCCcEEEecCCCHHHHHHcCc
Confidence 4568999999876 554444444433 589999998876543320 1 2344555654321 1 112
Q ss_pred CCccEEEEccCCCCchHHH---HHhcCCCcEEEEEeCC
Q 028002 142 APYDAIHVGAAAPEIPQAL---IDQLKPGGRMVIPVGN 176 (215)
Q Consensus 142 ~~~D~V~~~~~~~~~~~~~---~~~Lk~gG~lv~~~~~ 176 (215)
..+|+|+...........+ .+.+.+...++....+
T Consensus 83 ~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 83 EKADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred ccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 4689998877665444333 3334555566665544
No 405
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.95 E-value=0.084 Score=40.55 Aligned_cols=98 Identities=11% Similarity=0.018 Sum_probs=54.1
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh-------------------HHHHHHHHHHHhhcccCcccCCCeE
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP-------------------ELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~-------------------~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
+.+|+-+|||. |......+...|. ++++.+|.+. ...+.+++++....- .-.+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv-~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-----~~~v~ 104 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV-GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-----HIAIT 104 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-----TSEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC-CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-----CcEEE
Confidence 46899999985 5544433333354 6899999987 566777777665321 02344
Q ss_pred EEeCCCCCCCC--CCCCccEEEEccCCCCchHHHHHhcCCCcEEEE
Q 028002 129 VHVGDGRKGWP--EFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 129 ~~~~d~~~~~~--~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~ 172 (215)
....+...... ....||+|+...........+.+..+..|.-++
T Consensus 105 ~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i 150 (249)
T 1jw9_B 105 PVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLV 150 (249)
T ss_dssp EECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEE
T ss_pred EEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEE
Confidence 44443331100 013689999876544333333343333443333
No 406
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.91 E-value=0.23 Score=34.06 Aligned_cols=92 Identities=10% Similarity=0.100 Sum_probs=53.2
Q ss_pred CCEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC----CCCCC
Q 028002 69 GMHALDIGSGTGYLTACFALMVG-PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW----PEFAP 143 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~ 143 (215)
..+|+-+|+|. .+..+++.+. ...+|+++|.++..++.+++ ..+.++.+|..+.. .....
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-------------~~~~~~~gd~~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED-------------EGFDAVIADPTDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------------TTCEEEECCTTCHHHHHHSCCTT
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-------------CCCcEEECCCCCHHHHHhCCccc
Confidence 45799999975 3333333221 12689999999987766543 24567778876521 11256
Q ss_pred ccEEEEccCCCCch---HHHHHhcCCCcEEEEEeCC
Q 028002 144 YDAIHVGAAAPEIP---QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 144 ~D~V~~~~~~~~~~---~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|.|+...+..... -...+.+. ...++....+
T Consensus 71 ~d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia~~~~ 105 (141)
T 3llv_A 71 VSAVLITGSDDEFNLKILKALRSVS-DVYAIVRVSS 105 (141)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHC-CCCEEEEESC
T ss_pred CCEEEEecCCHHHHHHHHHHHHHhC-CceEEEEEcC
Confidence 89888776632211 12334455 5566554443
No 407
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.22 E-value=0.12 Score=40.78 Aligned_cols=53 Identities=30% Similarity=0.428 Sum_probs=38.7
Q ss_pred CCeEEEeCCCCCCC--CCCCCccEEEEccCCCC--------------------------chHHHHHhcCCCcEEEEEeCC
Q 028002 125 GSLSVHVGDGRKGW--PEFAPYDAIHVGAAAPE--------------------------IPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 125 ~~v~~~~~d~~~~~--~~~~~~D~V~~~~~~~~--------------------------~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
....++++|..+.. ...++||+|+++++... ++.++.++|+|||.+++.+++
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 46789999987532 23378999999998731 123577899999999998875
Q ss_pred C
Q 028002 177 I 177 (215)
Q Consensus 177 ~ 177 (215)
.
T Consensus 100 ~ 100 (297)
T 2zig_A 100 V 100 (297)
T ss_dssp E
T ss_pred C
Confidence 3
No 408
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.18 E-value=0.16 Score=35.10 Aligned_cols=87 Identities=18% Similarity=0.121 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeC-CCCCCCCCCCCcc
Q 028002 68 PGMHALDIGSGTGYLTACFALMVG-PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVG-DGRKGWPEFAPYD 145 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~D 145 (215)
.+.+|+-+|+|. .+..+++.+. ...+++.+|.++...+...+.+. ...... +..+. ...+|
T Consensus 20 ~~~~v~iiG~G~--iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~------------~~~~~~~~~~~~---~~~~D 82 (144)
T 3oj0_A 20 GGNKILLVGNGM--LASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE------------YEYVLINDIDSL---IKNND 82 (144)
T ss_dssp CCCEEEEECCSH--HHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT------------CEEEECSCHHHH---HHTCS
T ss_pred cCCEEEEECCCH--HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC------------CceEeecCHHHH---hcCCC
Confidence 378999999864 4444444331 11459999999887655433321 122211 11111 13589
Q ss_pred EEEEccCCCCchHHHHHhcCCCcEEEE
Q 028002 146 AIHVGAAAPEIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 146 ~V~~~~~~~~~~~~~~~~Lk~gG~lv~ 172 (215)
+|+...+..+..-. ...+++|+.++-
T Consensus 83 ivi~at~~~~~~~~-~~~l~~g~~vid 108 (144)
T 3oj0_A 83 VIITATSSKTPIVE-ERSLMPGKLFID 108 (144)
T ss_dssp EEEECSCCSSCSBC-GGGCCTTCEEEE
T ss_pred EEEEeCCCCCcEee-HHHcCCCCEEEE
Confidence 99887766542211 267788766544
No 409
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.77 E-value=3.1 Score=32.32 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCcc-----HHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC---
Q 028002 68 PGMHALDIGSGTG-----YLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G-----~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--- 139 (215)
.+.++|-.|++.| .++..+++. | .+|+.++.++...+.+++..... .++.++.+|+.+...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~-G--~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~ 98 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA-G--AELAFTYQGDALKKRVEPLAEEL--------GAFVAGHCDVADAASIDA 98 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT-T--CEEEEEECSHHHHHHHHHHHHHH--------TCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-C--CEEEEEcCCHHHHHHHHHHHHhc--------CCceEEECCCCCHHHHHH
Confidence 4678999997633 233344444 3 68999999876555554443332 357788888876211
Q ss_pred -------CCCCccEEEEccCC
Q 028002 140 -------EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 -------~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 99 ~~~~~~~~~g~iD~lVnnAG~ 119 (293)
T 3grk_A 99 VFETLEKKWGKLDFLVHAIGF 119 (293)
T ss_dssp HHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCcc
Confidence 12578999887654
No 410
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.76 E-value=0.9 Score=37.53 Aligned_cols=93 Identities=18% Similarity=0.264 Sum_probs=59.8
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC----CCCCC
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW----PEFAP 143 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~ 143 (215)
+++|+-+|+|. |......+...| ..|+++|.++..++.+++ ..+.++.+|..+.. .....
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~~v~~~~~-------------~g~~vi~GDat~~~~L~~agi~~ 68 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPDHIETLRK-------------FGMKVFYGDATRMDLLESAGAAK 68 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHHHHHHHHH-------------TTCCCEESCTTCHHHHHHTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHh-------------CCCeEEEcCCCCHHHHHhcCCCc
Confidence 46799999875 544433333323 689999999998887753 24567888887631 12257
Q ss_pred ccEEEEccCCCCch---HHHHHhcCCCcEEEEEeCC
Q 028002 144 YDAIHVGAAAPEIP---QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 144 ~D~V~~~~~~~~~~---~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+|++..+-.... -...+.+.|+..++.-..+
T Consensus 69 A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 69 AEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred cCEEEECCCChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 89888776553322 2345667788777775543
No 411
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.69 E-value=0.47 Score=42.53 Aligned_cols=46 Identities=20% Similarity=0.060 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCC----CCeEEEEecChHHHHHHHHHH
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGP----QGRAVGVEHIPELVVSSIQNI 113 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~----~~~v~~~D~s~~~~~~a~~~~ 113 (215)
+..+|+|+.||.|+++.-+...++. -.-+.++|.++.+++.-+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3468999999999999988776310 136789999999888776664
No 412
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.59 E-value=1.2 Score=37.64 Aligned_cols=87 Identities=17% Similarity=0.103 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 67 KPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
-.+.+++-+|+|. |......++..| .+|+.+|.++.....+... ..++ .+..+. ...+|
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~G--A~Viv~D~~~~~a~~Aa~~-------------g~dv--~~lee~---~~~aD 322 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAG--ARVIVTEIDPICALQATME-------------GLQV--LTLEDV---VSEAD 322 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHT-------------TCEE--CCGGGT---TTTCS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh-------------CCcc--CCHHHH---HHhcC
Confidence 4578999999983 433333344434 6899999998765554321 1121 122221 14589
Q ss_pred EEEEccCCCCch-HHHHHhcCCCcEEEEE
Q 028002 146 AIHVGAAAPEIP-QALIDQLKPGGRMVIP 173 (215)
Q Consensus 146 ~V~~~~~~~~~~-~~~~~~Lk~gG~lv~~ 173 (215)
+|+......+++ .+..+.+++|+.++-.
T Consensus 323 vVi~atG~~~vl~~e~l~~mk~gaiVvNa 351 (488)
T 3ond_A 323 IFVTTTGNKDIIMLDHMKKMKNNAIVCNI 351 (488)
T ss_dssp EEEECSSCSCSBCHHHHTTSCTTEEEEES
T ss_pred EEEeCCCChhhhhHHHHHhcCCCeEEEEc
Confidence 888776655555 5588899998877643
No 413
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.57 E-value=1.7 Score=33.09 Aligned_cols=77 Identities=12% Similarity=-0.002 Sum_probs=48.2
Q ss_pred CCCEEEEEcCC--ccH---HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC---
Q 028002 68 PGMHALDIGSG--TGY---LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--- 139 (215)
Q Consensus 68 ~~~~vLdiG~G--~G~---~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--- 139 (215)
.+.++|-.|++ .|. ++..+++. | .+|+.++.++...+.+.+.....+ ..++.++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~ 76 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA-G--ARLIFTYAGERLEKSVHELAGTLD------RNDSIILPCDVTNDAEIET 76 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-T--CEEEEEESSGGGHHHHHHHHHTSS------SCCCEEEECCCSSSHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-C--CEEEEecCchHHHHHHHHHHHhcC------CCCceEEeCCCCCHHHHHH
Confidence 36789999976 332 33344444 3 689999988766665555444322 1378899999876321
Q ss_pred -------CCCCccEEEEccCC
Q 028002 140 -------EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 -------~~~~~D~V~~~~~~ 153 (215)
..+.+|+++.+...
T Consensus 77 ~~~~~~~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 77 CFASIKEQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCeeEEEEcccc
Confidence 11468988877653
No 414
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.52 E-value=1.7 Score=29.17 Aligned_cols=92 Identities=17% Similarity=0.108 Sum_probs=49.8
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC----CCCCC
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW----PEFAP 143 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~ 143 (215)
+++|+-+|+|. |......+...+ .+++++|.++..++...+. ..+.++.+|..+.. .....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~~~~~~~~~------------~~~~~~~~d~~~~~~l~~~~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKDICKKASAE------------IDALVINGDCTKIKTLEDAGIED 69 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHH------------CSSEEEESCTTSHHHHHHTTTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHh------------cCcEEEEcCCCCHHHHHHcCccc
Confidence 46899998865 433222222223 6899999998766544321 13445566654210 11246
Q ss_pred ccEEEEccCCCCch---HHHHHhcCCCcEEEEEeC
Q 028002 144 YDAIHVGAAAPEIP---QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 144 ~D~V~~~~~~~~~~---~~~~~~Lk~gG~lv~~~~ 175 (215)
+|+|+...+..... ..+.+.+.++ .+++...
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~ 103 (140)
T 1lss_A 70 ADMYIAVTGKEEVNLMSSLLAKSYGIN-KTIARIS 103 (140)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHTTCC-CEEEECS
T ss_pred CCEEEEeeCCchHHHHHHHHHHHcCCC-EEEEEec
Confidence 89988876553321 2344556665 5555443
No 415
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=91.36 E-value=0.065 Score=48.23 Aligned_cols=94 Identities=19% Similarity=0.173 Sum_probs=58.8
Q ss_pred cCCCCCEEEEEcC-C-ccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeE-EEeCCCCCC---C
Q 028002 65 NLKPGMHALDIGS-G-TGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLS-VHVGDGRKG---W 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~-~~~~d~~~~---~ 138 (215)
.++++.+||-.|+ | .|..+..+++..| .+|++++.++. .+..+ .+. +.+- ....++.+. .
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~G--a~V~~t~~~~k-~~~l~-----lga------~~v~~~~~~~~~~~i~~~ 407 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHLG--AEVYATASEDK-WQAVE-----LSR------EHLASSRTCDFEQQFLGA 407 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHTT--CCEEEECCGGG-GGGSC-----SCG------GGEECSSSSTHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHcC--CEEEEEeChHH-hhhhh-----cCh------hheeecCChhHHHHHHHH
Confidence 3678899999995 5 4899999999987 57898886542 11111 111 1110 000011000 0
Q ss_pred CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 139 PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.....+|+|+....- ...+...++|+++|+++..
T Consensus 408 t~g~GvDvVld~~gg-~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 408 TGGRGVDVVLNSLAG-EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SCSSCCSEEEECCCT-TTTHHHHTSCTTCEEEEEC
T ss_pred cCCCCeEEEEECCCc-HHHHHHHHHhcCCCEEEEe
Confidence 122479999986654 5668899999999999875
No 416
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=91.21 E-value=0.46 Score=39.48 Aligned_cols=87 Identities=15% Similarity=0.012 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 67 KPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
-.+.+|.-+|.|. |......++.+| .+|+++|.++.....+.. ..+.+ .+..+.. ...|
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~G--a~Viv~D~~p~~a~~A~~-------------~G~~~--~sL~eal---~~AD 268 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFG--ARVVVTEVDPINALQAAM-------------EGYQV--LLVEDVV---EEAH 268 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH-------------TTCEE--CCHHHHT---TTCS
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCChhhhHHHHH-------------hCCee--cCHHHHH---hhCC
Confidence 3478999999997 766666666665 689999999865544432 12221 1222222 3579
Q ss_pred EEEEccCCCCchH-HHHHhcCCCcEEEEE
Q 028002 146 AIHVGAAAPEIPQ-ALIDQLKPGGRMVIP 173 (215)
Q Consensus 146 ~V~~~~~~~~~~~-~~~~~Lk~gG~lv~~ 173 (215)
+|+......+++. +....+|+|++++-.
T Consensus 269 VVilt~gt~~iI~~e~l~~MK~gAIVINv 297 (436)
T 3h9u_A 269 IFVTTTGNDDIITSEHFPRMRDDAIVCNI 297 (436)
T ss_dssp EEEECSSCSCSBCTTTGGGCCTTEEEEEC
T ss_pred EEEECCCCcCccCHHHHhhcCCCcEEEEe
Confidence 9987766655553 677888988766554
No 417
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.04 E-value=0.91 Score=34.19 Aligned_cols=94 Identities=17% Similarity=0.072 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 67 KPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
-.+.+||-+|+|. |..-...+...| .+|+.++.+.. ...++.... ..+.++........ ...+|
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~--~~l~~l~~~---------~~i~~i~~~~~~~d--L~~ad 93 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVS--AEINEWEAK---------GQLRVKRKKVGEED--LLNVF 93 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCC--HHHHHHHHT---------TSCEEECSCCCGGG--SSSCS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCC--HHHHHHHHc---------CCcEEEECCCCHhH--hCCCC
Confidence 3468999999986 332222222223 67888876532 112222211 35677766554322 25699
Q ss_pred EEEEccCCCCchHHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAPEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|++....+.+-..+....+ -|.++-.+.+
T Consensus 94 LVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~ 123 (223)
T 3dfz_A 94 FIVVATNDQAVNKFVKQHIK-NDQLVNMASS 123 (223)
T ss_dssp EEEECCCCTHHHHHHHHHSC-TTCEEEC---
T ss_pred EEEECCCCHHHHHHHHHHHh-CCCEEEEeCC
Confidence 99999888877777777777 7877654433
No 418
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.95 E-value=1.8 Score=29.89 Aligned_cols=96 Identities=13% Similarity=0.085 Sum_probs=55.3
Q ss_pred CCEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecC-hHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC----CCCC
Q 028002 69 GMHALDIGSGTGYLTACFALMVG-PQGRAVGVEHI-PELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW----PEFA 142 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s-~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~ 142 (215)
..+|+-+|+|. .+..+++.+. ....|+.+|.+ +...+...+... ..+.++.+|..+.. ....
T Consensus 3 ~~~vlI~G~G~--vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~----------~~~~~i~gd~~~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVCGHSI--LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----------DNADVIPGDSNDSSVLKKAGID 70 (153)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----------TTCEEEESCTTSHHHHHHHTTT
T ss_pred CCcEEEECCCH--HHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc----------CCCeEEEcCCCCHHHHHHcChh
Confidence 35788888754 4444443331 12689999997 454444332211 35778888876421 1235
Q ss_pred CccEEEEccCCCCch---HHHHHhcCCCcEEEEEeCC
Q 028002 143 PYDAIHVGAAAPEIP---QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 143 ~~D~V~~~~~~~~~~---~~~~~~Lk~gG~lv~~~~~ 176 (215)
.+|.|++.......- ....+.+.|...++.-..+
T Consensus 71 ~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 71 RCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp TCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred hCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 789888776554322 2345566677777775544
No 419
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=90.89 E-value=0.6 Score=44.27 Aligned_cols=44 Identities=23% Similarity=0.175 Sum_probs=35.1
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHH
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNI 113 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~ 113 (215)
..+++|+.||.|+++..+... |....+.++|+++.+++.-+.++
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHHC
T ss_pred CceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC
Confidence 468999999999999998876 42135889999999888766554
No 420
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.57 E-value=0.86 Score=29.64 Aligned_cols=87 Identities=11% Similarity=0.094 Sum_probs=48.9
Q ss_pred CCEEEEEcCCccHHHHHHHHHh---CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC---CCC
Q 028002 69 GMHALDIGSGTGYLTACFALMV---GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP---EFA 142 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~---~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~ 142 (215)
+++|+-+|+| ..+..+++.+ | ..+++++|.++...+... . ..+.+...|..+... ...
T Consensus 5 ~~~v~I~G~G--~iG~~~~~~l~~~g-~~~v~~~~r~~~~~~~~~----~---------~~~~~~~~d~~~~~~~~~~~~ 68 (118)
T 3ic5_A 5 RWNICVVGAG--KIGQMIAALLKTSS-NYSVTVADHDLAALAVLN----R---------MGVATKQVDAKDEAGLAKALG 68 (118)
T ss_dssp CEEEEEECCS--HHHHHHHHHHHHCS-SEEEEEEESCHHHHHHHH----T---------TTCEEEECCTTCHHHHHHHTT
T ss_pred cCeEEEECCC--HHHHHHHHHHHhCC-CceEEEEeCCHHHHHHHH----h---------CCCcEEEecCCCHHHHHHHHc
Confidence 4689999995 4444333332 3 157999999987666543 1 355666777654210 114
Q ss_pred CccEEEEccCCCCchHHHHHhcCCCcEEEE
Q 028002 143 PYDAIHVGAAAPEIPQALIDQLKPGGRMVI 172 (215)
Q Consensus 143 ~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~ 172 (215)
.+|+|+...+.... ..+.......|.-++
T Consensus 69 ~~d~vi~~~~~~~~-~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 69 GFDAVISAAPFFLT-PIIAKAAKAAGAHYF 97 (118)
T ss_dssp TCSEEEECSCGGGH-HHHHHHHHHTTCEEE
T ss_pred CCCEEEECCCchhh-HHHHHHHHHhCCCEE
Confidence 68999887754433 333333333343333
No 421
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.41 E-value=0.15 Score=40.64 Aligned_cols=54 Identities=17% Similarity=0.217 Sum_probs=39.8
Q ss_pred CCCeEEEeCCCCCCC--CCCCCccEEEEccCCCC--------------------chHHHHHhcCCCcEEEEEeCCC
Q 028002 124 EGSLSVHVGDGRKGW--PEFAPYDAIHVGAAAPE--------------------IPQALIDQLKPGGRMVIPVGNI 177 (215)
Q Consensus 124 ~~~v~~~~~d~~~~~--~~~~~~D~V~~~~~~~~--------------------~~~~~~~~Lk~gG~lv~~~~~~ 177 (215)
.....++++|..+.. ...++||+|+++++... .+.++.++|+|||.+++.+.+.
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 357788899876422 23378999999998732 1246789999999999987764
No 422
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=90.35 E-value=0.16 Score=51.36 Aligned_cols=100 Identities=18% Similarity=0.091 Sum_probs=65.6
Q ss_pred cCCCCCEEEEEcC-Cc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE-eCCCCC---CC
Q 028002 65 NLKPGMHALDIGS-GT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH-VGDGRK---GW 138 (215)
Q Consensus 65 ~~~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~-~~d~~~---~~ 138 (215)
.+++|.+||-.|+ |. |..++.+++..| .+|++++.++...+.+++.+...+. ..+.-. ..++.+ ..
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~G--a~Viat~~s~~k~~~l~~~~~~lga------~~v~~~~~~~~~~~i~~~ 1735 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSRG--CRVFTTVGSAEKRAYLQARFPQLDE------TCFANSRDTSFEQHVLRH 1735 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCTTCCS------TTEEESSSSHHHHHHHHT
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHcC--CEEEEEeCChhhhHHHHhhcCCCCc------eEEecCCCHHHHHHHHHh
Confidence 4688999999974 54 888899999876 5899999998887777664322221 111100 001000 01
Q ss_pred CCCCCccEEEEccCCCCchHHHHHhcCCCcEEEEE
Q 028002 139 PEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~ 173 (215)
.....+|+|+.... ....+...++|+++|+++..
T Consensus 1736 t~g~GvDvVld~~g-~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1736 TAGKGVDLVLNSLA-EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp TTSCCEEEEEECCC-HHHHHHHHTTEEEEEEEEEC
T ss_pred cCCCCceEEEECCC-chHHHHHHHhcCCCcEEEEe
Confidence 11246999987654 45677889999999998874
No 423
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=90.19 E-value=3.3 Score=31.42 Aligned_cols=76 Identities=9% Similarity=-0.013 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCc--c---HHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC---
Q 028002 68 PGMHALDIGSGT--G---YLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP--- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~--G---~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--- 139 (215)
+++++|--|+++ | ..+..+++. | .+|+.++.++...+.+.+.+.+.+- .++.++..|+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~-G--a~Vvi~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~ 75 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL-G--AKLVFTYRKERSRKELEKLLEQLNQ------PEAHLYQIDVQSDEEVIN 75 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT-T--CEEEEEESSGGGHHHHHHHHGGGTC------SSCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC-C--CEEEEEECCHHHHHHHHHHHHhcCC------CcEEEEEccCCCHHHHHH
Confidence 467899999643 3 234444554 3 7899999999888887777665432 467888889875211
Q ss_pred -------CCCCccEEEEccC
Q 028002 140 -------EFAPYDAIHVGAA 152 (215)
Q Consensus 140 -------~~~~~D~V~~~~~ 152 (215)
..+..|+++.+..
T Consensus 76 ~~~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 76 GFEQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHHhCCCCEEEeccc
Confidence 1267898887754
No 424
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=90.18 E-value=0.51 Score=38.91 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=35.7
Q ss_pred CEEEEEcCCccHHHHHHHHHhCCCCe----EEEEecChHHHHHHHHHHHh
Q 028002 70 MHALDIGSGTGYLTACFALMVGPQGR----AVGVEHIPELVVSSIQNIEK 115 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~~~~~~~----v~~~D~s~~~~~~a~~~~~~ 115 (215)
.+|+|+.||.|+.+..+.+...+-.- |.++|+++.+++.-+.++..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 58999999999999999776311123 88899999988877776643
No 425
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.55 E-value=2.5 Score=33.36 Aligned_cols=87 Identities=16% Similarity=0.179 Sum_probs=52.0
Q ss_pred CEEEEEcCCc-c-HHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC-CCCCCCCccE
Q 028002 70 MHALDIGSGT-G-YLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK-GWPEFAPYDA 146 (215)
Q Consensus 70 ~~vLdiG~G~-G-~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~D~ 146 (215)
++|.-||+|. | .++..+.+. |...+|+++|.++..++.+.+ .+. +.-...+..+ . ....|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~----~G~--------~~~~~~~~~~~~---~~~aDv 97 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD----LGI--------IDEGTTSIAKVE---DFSPDF 97 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH----TTS--------CSEEESCTTGGG---GGCCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHH----CCC--------cchhcCCHHHHh---hccCCE
Confidence 6899999986 4 445455554 432389999999987776543 221 1111222222 1 145799
Q ss_pred EEEccCCCC---chHHHHHhcCCCcEEEE
Q 028002 147 IHVGAAAPE---IPQALIDQLKPGGRMVI 172 (215)
Q Consensus 147 V~~~~~~~~---~~~~~~~~Lk~gG~lv~ 172 (215)
|+...+... +.+++...++++..++-
T Consensus 98 Vilavp~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 98 VMLSSPVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp EEECSCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEeCCHHHHHHHHHHHhhccCCCcEEEE
Confidence 987766544 33456677888765543
No 426
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.23 E-value=2.3 Score=32.61 Aligned_cols=77 Identities=16% Similarity=0.105 Sum_probs=47.4
Q ss_pred CCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecC------------hHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 69 GMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHI------------PELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
+.++|-.|++.| ++..+++.+ ....+|+.+|.+ ...++.+...+...+ .++.++.+|+.
T Consensus 10 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~ 81 (287)
T 3pxx_A 10 DKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-------RKAYTAEVDVR 81 (287)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-------SCEEEEECCTT
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-------CceEEEEccCC
Confidence 578888887665 333333332 112689999987 555565555554432 47888899987
Q ss_pred CCCC----------CCCCccEEEEccCC
Q 028002 136 KGWP----------EFAPYDAIHVGAAA 153 (215)
Q Consensus 136 ~~~~----------~~~~~D~V~~~~~~ 153 (215)
+... ..+..|+++.+...
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 6211 11478999877654
No 427
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.21 E-value=3.2 Score=33.47 Aligned_cols=78 Identities=17% Similarity=0.085 Sum_probs=46.2
Q ss_pred CCEEEEEcCCc-cHHHH-HHHHHhCCCCeEEEEecCh-------------------HHHHHHHHHHHhhcccCcccCCCe
Q 028002 69 GMHALDIGSGT-GYLTA-CFALMVGPQGRAVGVEHIP-------------------ELVVSSIQNIEKSAAAPLLKEGSL 127 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~-~l~~~~~~~~~v~~~D~s~-------------------~~~~~a~~~~~~~~~~~~~~~~~v 127 (215)
+.+|+-+|||. |.... .++.. |. ++++.+|.+. ...+.+++++....- .-++
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gv-g~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-----~v~v 190 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GI-GEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS-----EISV 190 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TC-SEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-----TSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CC-CeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC-----CCeE
Confidence 57999999986 55444 44444 55 7899999763 245566666665421 1245
Q ss_pred EEEeCCCCCCC--CCCCCccEEEEccCC
Q 028002 128 SVHVGDGRKGW--PEFAPYDAIHVGAAA 153 (215)
Q Consensus 128 ~~~~~d~~~~~--~~~~~~D~V~~~~~~ 153 (215)
+.....+.... .....||+|+.....
T Consensus 191 ~~~~~~i~~~~~~~~~~~~DlVvd~~Dn 218 (353)
T 3h5n_A 191 SEIALNINDYTDLHKVPEADIWVVSADH 218 (353)
T ss_dssp EEEECCCCSGGGGGGSCCCSEEEECCCC
T ss_pred EEeecccCchhhhhHhccCCEEEEecCC
Confidence 55554443211 113579999875543
No 428
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.79 E-value=2.8 Score=32.10 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-----
Q 028002 68 PGMHALDIGSGTGY---LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~---~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----- 139 (215)
+++.+|--|++.|. .+..+++. | .+|+.+|.+++.++...+.+...+ .++..+.+|+.+...
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~-G--a~Vv~~~~~~~~~~~~~~~i~~~g-------~~~~~~~~Dvt~~~~v~~~~ 75 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN-D--SIVVAVELLEDRLNQIVQELRGMG-------KEVLGVKADVSKKKDVEEFV 75 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEccCCCHHHHHHHH
Confidence 46788888877763 33344444 3 789999999999888888777654 478889999876211
Q ss_pred -----CCCCccEEEEccC
Q 028002 140 -----EFAPYDAIHVGAA 152 (215)
Q Consensus 140 -----~~~~~D~V~~~~~ 152 (215)
..+..|+++.+..
T Consensus 76 ~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 76 RRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCc
Confidence 1267899988765
No 429
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.51 E-value=3.8 Score=32.12 Aligned_cols=47 Identities=17% Similarity=0.172 Sum_probs=32.9
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh------------------HHHHHHHHHHHhh
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP------------------ELVVSSIQNIEKS 116 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~------------------~~~~~a~~~~~~~ 116 (215)
..+|+-+|||. |......+.+.|- ++++.+|.+. ...+.+++++...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGV-G~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i 101 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGI-GKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNI 101 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBC------------CCTTSBHHHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCC-CEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhh
Confidence 57999999996 6654444334355 7899999776 4566677777654
No 430
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=88.44 E-value=4 Score=32.57 Aligned_cols=102 Identities=12% Similarity=0.106 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhccc---------------CcccCCCeEEEe
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAA---------------PLLKEGSLSVHV 131 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---------------~~~~~~~v~~~~ 131 (215)
.+...|+.+|||.......+.... +...++-+|. +..++.-++.+...+.. ..+...+..++.
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 456789999999998888877652 3355666665 77777777766654210 000125788898
Q ss_pred CCCCCC-C--------CCCCCccEEEEccCCCCchH--------HHHHhcCCCcEEE
Q 028002 132 GDGRKG-W--------PEFAPYDAIHVGAAAPEIPQ--------ALIDQLKPGGRMV 171 (215)
Q Consensus 132 ~d~~~~-~--------~~~~~~D~V~~~~~~~~~~~--------~~~~~Lk~gG~lv 171 (215)
+|+.+. + ...+...++++-+.+..+.. .+.+.. |+|.++
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEE
Confidence 998762 2 11134556676666644332 233333 777765
No 431
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.19 E-value=3.2 Score=30.54 Aligned_cols=90 Identities=19% Similarity=0.098 Sum_probs=52.2
Q ss_pred CEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC----CCCCc
Q 028002 70 MHALDIGSGTGYLTACFALMVG-PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----EFAPY 144 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~~ 144 (215)
++|+-+|+|. .+..+++.+. ....|+.+|.++..++...+. ....++.+|..+... ....+
T Consensus 1 M~iiIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~------------~~~~~i~gd~~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 1 MKVIIIGGET--TAYYLARSMLSRKYGVVIINKDRELCEEFAKK------------LKATIIHGDGSHKEILRDAEVSKN 66 (218)
T ss_dssp CCEEEECCHH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH------------SSSEEEESCTTSHHHHHHHTCCTT
T ss_pred CEEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------------cCCeEEEcCCCCHHHHHhcCcccC
Confidence 3577888754 4444443331 126899999999877654322 245678888765210 12578
Q ss_pred cEEEEccCCCCch---HHHHHhcCCCcEEEEE
Q 028002 145 DAIHVGAAAPEIP---QALIDQLKPGGRMVIP 173 (215)
Q Consensus 145 D~V~~~~~~~~~~---~~~~~~Lk~gG~lv~~ 173 (215)
|.|++........ ....+.+.+...++.-
T Consensus 67 d~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 67 DVVVILTPRDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred CEEEEecCCcHHHHHHHHHHHHHcCCCeEEEE
Confidence 9988776554322 2233445555666553
No 432
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=88.12 E-value=1.6 Score=35.43 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=64.5
Q ss_pred HHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCC
Q 028002 56 ATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGR 135 (215)
Q Consensus 56 ~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~ 135 (215)
..+++.+.. ...+.+||.++.+.|.++..++.. .++.+.-|-......+.|+..++.. ...+.+... .
T Consensus 27 ~~ll~~~~~-~~~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~----~~~~~~~~~--~ 94 (375)
T 4dcm_A 27 EYLLQQLDD-TEIRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGID----ESSVKFLDS--T 94 (375)
T ss_dssp HHHHHTTTT-CCCCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCC----GGGSEEEET--T
T ss_pred HHHHHhhhh-ccCCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCC----ccceEeccc--c
Confidence 344444432 234568999999999999888643 2345533555555667777776643 123555432 2
Q ss_pred CCCCCCCCccEEEEccCCC-----CchHHHHHhcCCCcEEEEEe
Q 028002 136 KGWPEFAPYDAIHVGAAAP-----EIPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 136 ~~~~~~~~~D~V~~~~~~~-----~~~~~~~~~Lk~gG~lv~~~ 174 (215)
+.. ...||+|+.--+-. ..+..+...|++|+.+++..
T Consensus 95 ~~~--~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 95 ADY--PQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp SCC--CSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred ccc--ccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 222 26799987765532 23356778899999997754
No 433
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=87.86 E-value=1.6 Score=35.13 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=46.6
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh-------------------HHHHHHHHHHHhhcccCcccCCCeE
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP-------------------ELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~-------------------~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
..+|+-+|||. |......+.+.|. ++++.+|.+. ...+.+.+++....- .-++.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gv-g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp-----~v~v~ 109 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGV-KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNP-----MVDVK 109 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCT-----TSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCC-----CeEEE
Confidence 57999999985 6544443334355 7899998653 345666667665321 12455
Q ss_pred EEeCCCCCCCC-CCCCccEEEEccCCC
Q 028002 129 VHVGDGRKGWP-EFAPYDAIHVGAAAP 154 (215)
Q Consensus 129 ~~~~d~~~~~~-~~~~~D~V~~~~~~~ 154 (215)
....+...... -...||+|+......
T Consensus 110 ~~~~~~~~~~~~~~~~~dvVv~~~d~~ 136 (346)
T 1y8q_A 110 VDTEDIEKKPESFFTQFDAVCLTCCSR 136 (346)
T ss_dssp EECSCGGGCCHHHHTTCSEEEEESCCH
T ss_pred EEecccCcchHHHhcCCCEEEEcCCCH
Confidence 55444432111 014799998776543
No 434
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.76 E-value=0.98 Score=36.47 Aligned_cols=70 Identities=10% Similarity=-0.063 Sum_probs=42.8
Q ss_pred CCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC---CCCC
Q 028002 67 KPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP---EFAP 143 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~ 143 (215)
...++|+-+||| ..+..+++.+.....++..|.+...++.++ ..+..+..|+.+... ....
T Consensus 14 g~~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~--------------~~~~~~~~d~~d~~~l~~~~~~ 77 (365)
T 3abi_A 14 GRHMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVK--------------EFATPLKVDASNFDKLVEVMKE 77 (365)
T ss_dssp --CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHT--------------TTSEEEECCTTCHHHHHHHHTT
T ss_pred CCccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHh--------------ccCCcEEEecCCHHHHHHHHhC
Confidence 345789999984 455555555544578999999988776553 234445556543210 0145
Q ss_pred ccEEEEccC
Q 028002 144 YDAIHVGAA 152 (215)
Q Consensus 144 ~D~V~~~~~ 152 (215)
+|+|+...+
T Consensus 78 ~DvVi~~~p 86 (365)
T 3abi_A 78 FELVIGALP 86 (365)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEecC
Confidence 798877654
No 435
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.49 E-value=3.2 Score=32.18 Aligned_cols=77 Identities=14% Similarity=0.093 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHH-HHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPEL-VVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------ 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~-~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------ 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|+.++.++.. .+...+.+...+ .++.++.+|+.+...
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG-------VKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-------CCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHHH
Confidence 3578888887654 344443333 112689999987653 344444343322 478888999876211
Q ss_pred ----CCCCccEEEEccC
Q 028002 140 ----EFAPYDAIHVGAA 152 (215)
Q Consensus 140 ----~~~~~D~V~~~~~ 152 (215)
..+..|+++.+..
T Consensus 118 ~~~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHHHSSCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 1146899887754
No 436
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.26 E-value=1.6 Score=33.92 Aligned_cols=73 Identities=19% Similarity=0.177 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCccH---HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-----
Q 028002 68 PGMHALDIGSGTGY---LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~---~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----- 139 (215)
+++.+|--|++.|. .+..+++. | .+|+.+|.+++.++.+.+.+. .+...+.+|+.+...
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~-G--a~V~i~~r~~~~l~~~~~~~g----------~~~~~~~~Dv~~~~~v~~~~ 94 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE-G--ARVFITGRRKDVLDAAIAEIG----------GGAVGIQADSANLAELDRLY 94 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHC----------TTCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC-C--CEEEEEECCHHHHHHHHHHcC----------CCeEEEEecCCCHHHHHHHH
Confidence 46788888887763 33344444 3 789999999988776655442 356777888875211
Q ss_pred -----CCCCccEEEEccCC
Q 028002 140 -----EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 -----~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 95 ~~~~~~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 95 EKVKAEAGRIDVLFVNAGG 113 (273)
T ss_dssp HHHHHHHSCEEEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 12578988877643
No 437
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=87.21 E-value=2.5 Score=27.86 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=28.8
Q ss_pred CCccEEEEccCCCCchHHHHHhcCCCcEEEEEeCC
Q 028002 142 APYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 142 ~~~D~V~~~~~~~~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+.||+|+..+......+++.+...+.|.=+..++.
T Consensus 52 ~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~vI~~ 86 (108)
T 3nbm_A 52 GVYDLIILAPQVRSYYREMKVDAERLGIQIVATRG 86 (108)
T ss_dssp GGCSEEEECGGGGGGHHHHHHHHTTTTCEEEECCH
T ss_pred cCCCEEEEChHHHHHHHHHHHHhhhcCCcEEEeCH
Confidence 56999999999999999999988887876665543
No 438
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.18 E-value=6.6 Score=30.93 Aligned_cols=78 Identities=15% Similarity=0.202 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 68 PGMHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
+..+|.-+|+|. |. ++..++.. +...+++.+|+++...+.....+..... .....+.+...+. .. ....|
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~-~~~~ev~l~Di~~~~~~~~~~dl~~~~~---~~~~~~~i~~~~~-~a---l~~aD 76 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQ-GIADEIVLIDANESKAIGDAMDFNHGKV---FAPKPVDIWHGDY-DD---CRDAD 76 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHTT---SSSSCCEEEECCG-GG---TTTCS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-CCCCEEEEEeCCcchHHHHHhhHHHHhh---hcCCCeEEEcCcH-HH---hCCCC
Confidence 346899999987 44 33333333 4346899999998755432222222110 1111444443322 21 24589
Q ss_pred EEEEccCC
Q 028002 146 AIHVGAAA 153 (215)
Q Consensus 146 ~V~~~~~~ 153 (215)
+|+.....
T Consensus 77 vViia~~~ 84 (316)
T 1ldn_A 77 LVVICAGA 84 (316)
T ss_dssp EEEECCSC
T ss_pred EEEEcCCC
Confidence 99888654
No 439
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.07 E-value=5.6 Score=30.24 Aligned_cols=67 Identities=13% Similarity=0.182 Sum_probs=47.7
Q ss_pred CEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEE
Q 028002 70 MHALDIGSGTGYLTACFALMVG-PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIH 148 (215)
Q Consensus 70 ~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~ 148 (215)
++||-.|+ |.++..+++.+- ...+|++++.++....... . .+++++.+|..+.. ...+|.|+
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~---------~~~~~~~~D~~d~~--~~~~d~vi 68 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A---------SGAEPLLWPGEEPS--LDGVTHLL 68 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H---------TTEEEEESSSSCCC--CTTCCEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h---------CCCeEEEecccccc--cCCCCEEE
Confidence 68999994 888887777662 2268999999886544322 1 47888999987743 46789998
Q ss_pred EccCC
Q 028002 149 VGAAA 153 (215)
Q Consensus 149 ~~~~~ 153 (215)
.....
T Consensus 69 ~~a~~ 73 (286)
T 3ius_A 69 ISTAP 73 (286)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 77654
No 440
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=87.01 E-value=2.3 Score=35.85 Aligned_cols=87 Identities=14% Similarity=0.003 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 67 KPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
-.+.+|.-+|.|. |......++.+| .+|+++|.++.....+. . ..+.+ .+..+.. ...|
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~G--~~Viv~d~~~~~~~~a~----~---------~g~~~--~~l~ell---~~aD 314 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGLG--ARVYITEIDPICAIQAV----M---------EGFNV--VTLDEIV---DKGD 314 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSCHHHHHHHH----T---------TTCEE--CCHHHHT---TTCS
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCc--CEEEEEeCChhhHHHHH----H---------cCCEe--cCHHHHH---hcCC
Confidence 4578999999986 666666666655 68999999986542221 1 12222 1222211 4579
Q ss_pred EEEEccCCCCch-HHHHHhcCCCcEEEEE
Q 028002 146 AIHVGAAAPEIP-QALIDQLKPGGRMVIP 173 (215)
Q Consensus 146 ~V~~~~~~~~~~-~~~~~~Lk~gG~lv~~ 173 (215)
+|+......+++ .+..+.+|+|++|+=.
T Consensus 315 iVi~~~~t~~lI~~~~l~~MK~gailiNv 343 (479)
T 1v8b_A 315 FFITCTGNVDVIKLEHLLKMKNNAVVGNI 343 (479)
T ss_dssp EEEECCSSSSSBCHHHHTTCCTTCEEEEC
T ss_pred EEEECCChhhhcCHHHHhhcCCCcEEEEe
Confidence 998886666655 5677889998877643
No 441
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=86.95 E-value=1.9 Score=30.53 Aligned_cols=95 Identities=18% Similarity=0.106 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCC-----CC
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPE-----FA 142 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~ 142 (215)
....|||+|-|+|..--.+...+ |+..++++|..-..-. ..-.+.-.++.+|+.+..+. ..
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR~~~~hp-------------~~~P~~e~~ilGdi~~tL~~~~~r~g~ 105 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHV-QGREIYVFERAVASHP-------------DSTPPEAQLILGDIRETLPATLERFGA 105 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHC-CSSCEEEEESSCCCCG-------------GGCCCGGGEEESCHHHHHHHHHHHHCS
T ss_pred CCCceEEecCCCChhHHHHHHhC-CCCcEEEEEeeeccCC-------------CCCCchHheecccHHHHHHHHHHhcCC
Confidence 34689999999999999999997 6689999995321100 01112334555554433221 12
Q ss_pred CccEEEEccCCC----------CchHHHHHhcCCCcEEEEEeCC
Q 028002 143 PYDAIHVGAAAP----------EIPQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 143 ~~D~V~~~~~~~----------~~~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+.-+++++.... ++...+..+|.|||.++-..+-
T Consensus 106 ~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 106 TASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp CEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred ceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 333344443332 2335567899999999875444
No 442
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=86.80 E-value=7.8 Score=29.91 Aligned_cols=79 Identities=14% Similarity=0.067 Sum_probs=50.5
Q ss_pred CCEEEEEcCCccHHHHHH----HHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-----
Q 028002 69 GMHALDIGSGTGYLTACF----ALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----- 139 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l----~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----- 139 (215)
+.++|-.|++.| ++..+ ++......+|+.++.+...++...+.+..... ..++.++.+|+.+...
T Consensus 33 ~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~Dv~d~~~v~~~~ 106 (287)
T 3rku_A 33 KKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP-----NAKVHVAQLDITQAEKIKPFI 106 (287)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT-----TCEEEEEECCTTCGGGHHHHH
T ss_pred CCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC-----CCeEEEEECCCCCHHHHHHHH
Confidence 578998887654 33333 44321112899999999888877766654311 1467888888875221
Q ss_pred -----CCCCccEEEEccCC
Q 028002 140 -----EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 -----~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 107 ~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 107 ENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp HTSCGGGCSCCEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCc
Confidence 12478999887653
No 443
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.77 E-value=0.69 Score=35.42 Aligned_cols=34 Identities=26% Similarity=0.248 Sum_probs=23.8
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP 103 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~ 103 (215)
+.+|+-+|||. |......+.+.|. ++++.+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gv-g~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGV-GTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC-SEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCC-CeEEEEeCCC
Confidence 57999999985 6554444444455 7899998764
No 444
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.63 E-value=4.8 Score=30.77 Aligned_cols=99 Identities=18% Similarity=0.165 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecC-hHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHI-PELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------ 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s-~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------ 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|+.++.+ ....+...+.+...+ .++.++.+|..+...
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG-------GRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHHH
Confidence 4678888887665 333333332 112578887554 455555555554432 477888888875211
Q ss_pred ----CCCCccEEEEccCCCC-------------------------chHHHHHhcCCCcEEEEEe
Q 028002 140 ----EFAPYDAIHVGAAAPE-------------------------IPQALIDQLKPGGRMVIPV 174 (215)
Q Consensus 140 ----~~~~~D~V~~~~~~~~-------------------------~~~~~~~~Lk~gG~lv~~~ 174 (215)
..+..|+++.+..... +.+.+.+.++.+|.++...
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 1147899988765311 1124566777888887753
No 445
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.08 E-value=8.3 Score=28.57 Aligned_cols=93 Identities=12% Similarity=-0.075 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC----CCCCC
Q 028002 68 PGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW----PEFAP 143 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~ 143 (215)
...+|+-+|+ |..+..+++.+...+.|+++|.++..++.++ ..+.++.+|..+.. .....
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~--------------~~~~~i~gd~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR--------------SGANFVHGDPTRVSDLEKANVRG 71 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH--------------TTCEEEESCTTCHHHHHHTTCTT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh--------------cCCeEEEcCCCCHHHHHhcCcch
Confidence 3568999987 5666777776633222999999988765543 14678888876421 12357
Q ss_pred ccEEEEccCCCCc---hHHHHHhcCCCcEEEEEeCC
Q 028002 144 YDAIHVGAAAPEI---PQALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 144 ~D~V~~~~~~~~~---~~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|.|++..+-... .....+.+.|+..++.-+.+
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 72 ARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred hcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 8988877654321 12345567777677765543
No 446
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.89 E-value=11 Score=29.43 Aligned_cols=39 Identities=26% Similarity=0.114 Sum_probs=25.2
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHH
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVV 107 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~ 107 (215)
.++|.-+|+|. |......+...+...+|+.+|.++..++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~ 46 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVE 46 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence 47899999987 5433333323232238999999986655
No 447
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=85.82 E-value=4 Score=31.08 Aligned_cols=100 Identities=20% Similarity=0.213 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEec-ChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEH-IPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------ 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------ 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|+.++. +....+...+.+...+ .++.++.+|+.+...
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-------SDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CcEEEEEcCCCCHHHHHHHHH
Confidence 3568888886654 344443333 11257887765 4555555555554432 478888899876211
Q ss_pred ----CCCCccEEEEccCCCC-------------------------chHHHHHhcCCCcEEEEEeC
Q 028002 140 ----EFAPYDAIHVGAAAPE-------------------------IPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 140 ----~~~~~D~V~~~~~~~~-------------------------~~~~~~~~Lk~gG~lv~~~~ 175 (215)
..+..|+++.+..... +.+.+.+.++.+|.++....
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 1146899887765311 11345667788888877543
No 448
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.51 E-value=9.5 Score=30.55 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=24.5
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP 103 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~ 103 (215)
+.+||-+|||. |......+...|- ++++.+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV-g~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEecCCE
Confidence 57999999996 6555544444455 7899998764
No 449
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.50 E-value=7.5 Score=30.09 Aligned_cols=74 Identities=15% Similarity=0.033 Sum_probs=46.4
Q ss_pred CCEEEEEcCCc-cHH----HHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC----
Q 028002 69 GMHALDIGSGT-GYL----TACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP---- 139 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~----~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---- 139 (215)
+.++|-.|++. ..+ +..+++. | .+|+.++.++...+...+..... ..+.++.+|+.+...
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~-G--~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~ 98 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQ-G--AEVALTYLSETFKKRVDPLAESL--------GVKLTVPCDVSDAESVDNM 98 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT-T--CEEEEEESSGGGHHHHHHHHHHH--------TCCEEEECCTTCHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHC-C--CEEEEEeCChHHHHHHHHHHHhc--------CCeEEEEcCCCCHHHHHHH
Confidence 57899999754 233 3344444 3 68999999876655555444332 245788888876211
Q ss_pred ------CCCCccEEEEccCC
Q 028002 140 ------EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ------~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 99 ~~~~~~~~g~iD~lVnnAG~ 118 (296)
T 3k31_A 99 FKVLAEEWGSLDFVVHAVAF 118 (296)
T ss_dssp HHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCc
Confidence 11478999887754
No 450
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=85.37 E-value=3.5 Score=32.01 Aligned_cols=78 Identities=15% Similarity=0.033 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecCh--HHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-----
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIP--ELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~--~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----- 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|+.++.+. ...+...+.+...+ .++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~ 119 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-------RKAVLLPGDLSDESFARSLV 119 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-------CCEEECCCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-------CcEEEEEecCCCHHHHHHHH
Confidence 3578888887654 444444333 1126788888763 34444444444332 467888888875211
Q ss_pred -----CCCCccEEEEccCC
Q 028002 140 -----EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 -----~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 120 ~~~~~~~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 120 HKAREALGGLDILALVAGK 138 (294)
T ss_dssp HHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 11478998877654
No 451
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.07 E-value=2.8 Score=32.13 Aligned_cols=76 Identities=20% Similarity=0.158 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC------
Q 028002 68 PGMHALDIGSGTGY---LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW------ 138 (215)
Q Consensus 68 ~~~~vLdiG~G~G~---~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~------ 138 (215)
+++.+|--|++.|. .+..+++. | .+|+..|.+++.++...+.+...+ .++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~-G--a~Vvi~~~~~~~~~~~~~~l~~~g-------~~~~~~~~Dv~~~~~v~~~~ 77 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA-G--ARVILNDIRATLLAESVDTLTRKG-------YDAHGVAFDVTDELAIEAAF 77 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-T--CEEEECCSCHHHHHHHHHHHHHTT-------CCEEECCCCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-C--CEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEeeCCCHHHHHHHH
Confidence 46788888877653 33334444 2 789999999998888877776644 46778888887621
Q ss_pred ----CCCCCccEEEEccCC
Q 028002 139 ----PEFAPYDAIHVGAAA 153 (215)
Q Consensus 139 ----~~~~~~D~V~~~~~~ 153 (215)
...+..|+++.+...
T Consensus 78 ~~~~~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 78 SKLDAEGIHVDILINNAGI 96 (255)
T ss_dssp HHHHHTTCCCCEEEECCCC
T ss_pred HHHHHHCCCCcEEEECCCC
Confidence 123678999888754
No 452
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=85.01 E-value=3.2 Score=35.08 Aligned_cols=87 Identities=13% Similarity=-0.002 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 67 KPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
-.+.+|.-+|.|. |......++.+| .+|+++|.++.....+. . ..+.+ .+..+.. ...|
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~G--~~V~v~d~~~~~~~~a~----~---------~G~~~--~~l~ell---~~aD 334 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGLG--ATVWVTEIDPICALQAA----M---------EGYRV--VTMEYAA---DKAD 334 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSCHHHHHHHH----T---------TTCEE--CCHHHHT---TTCS
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCChHhHHHHH----H---------cCCEe--CCHHHHH---hcCC
Confidence 4578999999886 665555555544 68999999986532221 1 12222 1222211 4579
Q ss_pred EEEEccCCCCch-HHHHHhcCCCcEEEEE
Q 028002 146 AIHVGAAAPEIP-QALIDQLKPGGRMVIP 173 (215)
Q Consensus 146 ~V~~~~~~~~~~-~~~~~~Lk~gG~lv~~ 173 (215)
+|+......+++ .+..+.+|+|.+|+=.
T Consensus 335 iVi~~~~t~~lI~~~~l~~MK~gAilINv 363 (494)
T 3d64_A 335 IFVTATGNYHVINHDHMKAMRHNAIVCNI 363 (494)
T ss_dssp EEEECSSSSCSBCHHHHHHCCTTEEEEEC
T ss_pred EEEECCCcccccCHHHHhhCCCCcEEEEc
Confidence 998876555555 5778899998776643
No 453
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=84.83 E-value=2.7 Score=34.12 Aligned_cols=43 Identities=14% Similarity=0.054 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHH
Q 028002 67 KPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQ 111 (215)
Q Consensus 67 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~ 111 (215)
-.+.+|+-+|+|. |......+...| .+|++.|.++..++...+
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~G--akVvv~D~~~~~l~~~a~ 214 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEG--AKLVVTDVNKAAVSAAVA 214 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH
Confidence 3578999999987 666555555545 579999999887664443
No 454
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.77 E-value=5.8 Score=31.19 Aligned_cols=95 Identities=16% Similarity=0.102 Sum_probs=49.2
Q ss_pred CEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhccc-CcccCCCeEEEeCCCCCCCC-CCCCcc
Q 028002 70 MHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAA-PLLKEGSLSVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 70 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~v~~~~~d~~~~~~-~~~~~D 145 (215)
++|.-+|+|. |. ++..+++. | .+|+.++.++ .+.. +..+.. .........+.......... ....+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g--~~V~~~~r~~--~~~i----~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-G--HCVSVVSRSD--YETV----KAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-T--CEEEEECSTT--HHHH----HHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C--CeEEEEeCCh--HHHH----HhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 5799999997 43 44444544 3 6899999876 2333 222211 00001222221111111111 113689
Q ss_pred EEEEccCCC---CchHHHHHhcCCCcEEEEE
Q 028002 146 AIHVGAAAP---EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 146 ~V~~~~~~~---~~~~~~~~~Lk~gG~lv~~ 173 (215)
+|+..-... .+.+.+...++++..++..
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEE
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEe
Confidence 998776543 4556667777777765543
No 455
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=84.65 E-value=8.8 Score=29.44 Aligned_cols=80 Identities=13% Similarity=0.035 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC-CC------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG-WP------ 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~------ 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|++++.++...+.+.+.+...+ ..++.++..|+.+. ..
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN------HENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------CCSEEEEECCTTSCHHHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CCceEEEEccCCCcHHHHHHHHH
Confidence 3567888876654 444444433 112689999999988777766665432 14788999998774 10
Q ss_pred ----CCCCccEEEEccCCC
Q 028002 140 ----EFAPYDAIHVGAAAP 154 (215)
Q Consensus 140 ----~~~~~D~V~~~~~~~ 154 (215)
..+..|+++.+....
T Consensus 84 ~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHSSCCEEEECCCCC
T ss_pred HHHHhCCCCCEEEECCccc
Confidence 014789999887653
No 456
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.55 E-value=2.8 Score=28.12 Aligned_cols=92 Identities=14% Similarity=0.115 Sum_probs=49.1
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCC--CC--CCCC
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKG--WP--EFAP 143 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~--~~~~ 143 (215)
+.+|+-+|+|. |......+...| .+++++|.++...+.+++ ....++.+|..+. +. ....
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g--~~v~~~d~~~~~~~~~~~-------------~~~~~~~~d~~~~~~l~~~~~~~ 70 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG--HEVLAVDINEEKVNAYAS-------------YATHAVIANATEENELLSLGIRN 70 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCCEEEESCHHHHHTTTT-------------TCSEEEECCTTCHHHHHTTTGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH-------------hCCEEEEeCCCCHHHHHhcCCCC
Confidence 45799999864 433333333323 579999998765443221 1234556665431 00 1246
Q ss_pred ccEEEEccCCC-Cch---HHHHHhcCCCcEEEEEeCC
Q 028002 144 YDAIHVGAAAP-EIP---QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 144 ~D~V~~~~~~~-~~~---~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+|+...... +.. ....+.+.+. .+++...+
T Consensus 71 ~d~vi~~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 71 FEYVIVAIGANIQASTLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHTTCS-EEEEECCS
T ss_pred CCEEEECCCCchHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence 89998877654 221 2234445665 66554443
No 457
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=84.44 E-value=2.6 Score=38.97 Aligned_cols=76 Identities=9% Similarity=-0.007 Sum_probs=45.1
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh-------------------HHHHHHHHHHHhhcccCcccCCCeE
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP-------------------ELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~-------------------~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
+.+||-+|||. |......+.+.|- ++++.+|.+. ...+.+++++.... +.-.+.
T Consensus 27 ~s~VlIvG~GGlGseiak~La~aGV-g~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~L~~lN-----P~v~v~ 100 (1015)
T 3cmm_A 27 TSNVLILGLKGLGVEIAKNVVLAGV-KSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELN-----AYVPVN 100 (1015)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCC-SEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHTTSC-----TTSCEE
T ss_pred cCEEEEECCChHHHHHHHHHHHcCC-CeEEEecCCEechhhhccccccChhhcChHHHHHHHHHHHHHC-----CCCeEE
Confidence 57999999975 6544433333365 7899999662 23555666665432 112445
Q ss_pred EEeCCCCCCCCCCCCccEEEEccC
Q 028002 129 VHVGDGRKGWPEFAPYDAIHVGAA 152 (215)
Q Consensus 129 ~~~~d~~~~~~~~~~~D~V~~~~~ 152 (215)
........... ..||+|+....
T Consensus 101 ~~~~~l~~~~l--~~~DvVv~~~d 122 (1015)
T 3cmm_A 101 VLDSLDDVTQL--SQFQVVVATDT 122 (1015)
T ss_dssp ECCCCCCSTTG--GGCSEEEECTT
T ss_pred EecCCCCHHHH--hcCCEEEEcCC
Confidence 44444432222 47999997755
No 458
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=84.43 E-value=4.3 Score=33.74 Aligned_cols=75 Identities=12% Similarity=0.062 Sum_probs=42.0
Q ss_pred CCCEEEEEcCCccHHH-HHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 68 PGMHALDIGSGTGYLT-ACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~-~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
++.+|+-+|.|....+ ..++...| .+|++.|..+.......+.+.. ..+.+..+........ +.+|+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~~~~~~~~L~~---------~gi~~~~g~~~~~~~~-~~~d~ 75 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFDENPTAQSLLE---------EGIKVVCGSHPLELLD-EDFCY 75 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGGGCHHHHHHHH---------TTCEEEESCCCGGGGG-SCEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCcccCChHHHHHHh---------CCCEEEECCChHHhhc-CCCCE
Confidence 4678999999864433 33333334 7999999865311112233443 3456665543221111 23899
Q ss_pred EEEccCCC
Q 028002 147 IHVGAAAP 154 (215)
Q Consensus 147 V~~~~~~~ 154 (215)
|+.++..+
T Consensus 76 vv~spgi~ 83 (451)
T 3lk7_A 76 MIKNPGIP 83 (451)
T ss_dssp EEECTTSC
T ss_pred EEECCcCC
Confidence 98887663
No 459
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.30 E-value=6.3 Score=29.35 Aligned_cols=77 Identities=14% Similarity=-0.012 Sum_probs=50.1
Q ss_pred CCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC---------
Q 028002 69 GMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW--------- 138 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~--------- 138 (215)
++++|-.|++.| ++..+++.+ ....+|+.++.++...+...+.+...+ .++.++..|..+..
T Consensus 5 ~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-------FKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEecCCCHHHHHHHHHHH
Confidence 567888876544 444444333 112689999999988877776665543 47888888887521
Q ss_pred -CCCCCccEEEEccCC
Q 028002 139 -PEFAPYDAIHVGAAA 153 (215)
Q Consensus 139 -~~~~~~D~V~~~~~~ 153 (215)
...+..|+++.+...
T Consensus 77 ~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 77 KAENLAIDILVNNAGI 92 (247)
T ss_dssp HHTTCCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 112468999877654
No 460
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.15 E-value=10 Score=29.81 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=40.4
Q ss_pred CEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 70 MHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 70 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
++|.-+|+|. |. ++..++.. +...+++.+|+++..++.....+... .. +. ....+...+. .. ....|+|
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~~~~~~~~~~l~~~-~~--~~-~~~~i~~~d~-~~---~~~aDvV 71 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDKKRAEGDALDLIHG-TP--FT-RRANIYAGDY-AD---LKGSDVV 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHH-GG--GS-CCCEEEECCG-GG---GTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCChHHHHHHHHHHHhh-hh--hc-CCcEEEeCCH-HH---hCCCCEE
Confidence 3678899986 43 33334444 32248999999988776544333221 10 00 1223333331 11 2468999
Q ss_pred EEccCC
Q 028002 148 HVGAAA 153 (215)
Q Consensus 148 ~~~~~~ 153 (215)
+.....
T Consensus 72 iiav~~ 77 (319)
T 1a5z_A 72 IVAAGV 77 (319)
T ss_dssp EECCCC
T ss_pred EEccCC
Confidence 877664
No 461
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=83.35 E-value=9.3 Score=29.19 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=44.6
Q ss_pred CCEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecChHH-HHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-------
Q 028002 69 GMHALDIGSGTGYLTACFALMVG-PQGRAVGVEHIPEL-VVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------- 139 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~-~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 139 (215)
+.++|-.|++. .++..+++.+- ...+|++++.++.. .+...+.+...+ .++.++.+|..+...
T Consensus 29 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGR-GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------SDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC-------CCeEEEEcCCCCHHHHHHHHHH
Confidence 56788777654 44444444331 12689998887643 344334443322 467888888765210
Q ss_pred ---CCCCccEEEEccCC
Q 028002 140 ---EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 101 ~~~~~g~iD~lv~~Ag~ 117 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGV 117 (283)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 11468999877654
No 462
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=83.31 E-value=9.5 Score=33.15 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=32.8
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh-------------------HHHHHHHHHHHhh
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP-------------------ELVVSSIQNIEKS 116 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~-------------------~~~~~a~~~~~~~ 116 (215)
+.+||-+|||. |......+.+.|- ++++.+|.+. ...+.+++++...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGV-G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~i 392 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI 392 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhh
Confidence 46999999996 6655444444455 7999999765 3456677777664
No 463
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.09 E-value=5.4 Score=30.54 Aligned_cols=87 Identities=16% Similarity=0.134 Sum_probs=48.6
Q ss_pred CEEEEEcCCc-cHH-HHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCC-CccE
Q 028002 70 MHALDIGSGT-GYL-TACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFA-PYDA 146 (215)
Q Consensus 70 ~~vLdiG~G~-G~~-~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~D~ 146 (215)
++|.-||+|. |.. +..+++. |...+|+++|.++..++.+++ .+. .. . ...+..+.. . ..|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~----~g~------~~-~-~~~~~~~~~---~~~aDv 65 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD----LGI------ID-E-GTTSIAKVE---DFSPDF 65 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH----TTS------CS-E-EESCGGGGG---GTCCSE
T ss_pred cEEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHH----CCC------cc-c-ccCCHHHHh---cCCCCE
Confidence 3688899886 443 3333333 322379999999887765542 221 00 1 112221111 3 6899
Q ss_pred EEEccCCCC---chHHHHHhcCCCcEEEE
Q 028002 147 IHVGAAAPE---IPQALIDQLKPGGRMVI 172 (215)
Q Consensus 147 V~~~~~~~~---~~~~~~~~Lk~gG~lv~ 172 (215)
|+...+... +.+.+...++++..++.
T Consensus 66 Vilavp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 66 VMLSSPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp EEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 987765543 33456667888775554
No 464
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.53 E-value=11 Score=29.24 Aligned_cols=85 Identities=16% Similarity=0.224 Sum_probs=48.5
Q ss_pred CCEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 69 GMHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 69 ~~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.++|.-||+|. |. ++..+++. | .+|+++|.++..++...+. +. .....+..+.. ...|+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-G--~~V~~~dr~~~~~~~~~~~----g~---------~~~~~~~~e~~---~~aDv 67 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-G--LSTWGADLNPQACANLLAE----GA---------CGAAASAREFA---GVVDA 67 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T--CEEEEECSCHHHHHHHHHT----TC---------SEEESSSTTTT---TTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C--CeEEEEECCHHHHHHHHHc----CC---------ccccCCHHHHH---hcCCE
Confidence 46899999986 43 44444444 3 6899999999877665431 21 11122322222 35798
Q ss_pred EEEccCCCCchHHH-------HHhcCCCcEEEE
Q 028002 147 IHVGAAAPEIPQAL-------IDQLKPGGRMVI 172 (215)
Q Consensus 147 V~~~~~~~~~~~~~-------~~~Lk~gG~lv~ 172 (215)
|+...+.....+.+ ...+++|..++-
T Consensus 68 vi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 68 LVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp EEECCSSHHHHHHHHC--CCCGGGSCTTCEEEE
T ss_pred EEEECCCHHHHHHHHhChhhHHhhCCCCCEEEe
Confidence 88776654333333 345666655543
No 465
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=81.97 E-value=9.5 Score=29.81 Aligned_cols=97 Identities=20% Similarity=0.272 Sum_probs=48.7
Q ss_pred CEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEE
Q 028002 70 MHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIH 148 (215)
Q Consensus 70 ~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~ 148 (215)
++|.-+|+|. |......+...+...+++.+|+++..++.....+.. .. . +. ....+...+. . .....|+|+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~-~~-~-~~-~~~~i~~~~~-~---a~~~aDvVI 72 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAH-AA-P-VS-HGTRVWHGGH-S---ELADAQVVI 72 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTT-SC-C-TT-SCCEEEEECG-G---GGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhh-hh-h-hc-CCeEEEECCH-H---HhCCCCEEE
Confidence 3688899987 443333333323334899999998766532222211 10 0 10 2233333232 1 124579998
Q ss_pred EccCCCC-------------------chHHHHHhcCCCcEEEEEeC
Q 028002 149 VGAAAPE-------------------IPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 149 ~~~~~~~-------------------~~~~~~~~Lk~gG~lv~~~~ 175 (215)
.....+. +.+.+.++ .|++++++.++
T Consensus 73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tN 117 (304)
T 2v6b_A 73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSN 117 (304)
T ss_dssp ECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSS
T ss_pred EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecC
Confidence 7764332 11334444 69998887443
No 466
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=81.86 E-value=5.2 Score=34.98 Aligned_cols=79 Identities=9% Similarity=0.003 Sum_probs=46.9
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh-------------------HHHHHHHHHHHhhcccCcccCCCeE
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP-------------------ELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~-------------------~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
..+|+-+|||. |......+.+.|- ++++.+|.+. .-.+.+++++.... +.-++.
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGV-G~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iN-----P~v~V~ 90 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGF-SHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFY-----PKANIV 90 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTC-----TTCEEE
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCC-CeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHC-----CCCeEE
Confidence 47999999986 6544444334465 7899999654 22455566665432 113555
Q ss_pred EEeCCCCCCCCC---CCCccEEEEccCC
Q 028002 129 VHVGDGRKGWPE---FAPYDAIHVGAAA 153 (215)
Q Consensus 129 ~~~~d~~~~~~~---~~~~D~V~~~~~~ 153 (215)
.....+...... ...||+|+....-
T Consensus 91 a~~~~i~~~~~~~~~~~~~DlVvda~Dn 118 (640)
T 1y8q_B 91 AYHDSIMNPDYNVEFFRQFILVMNALDN 118 (640)
T ss_dssp EEESCTTSTTSCHHHHTTCSEEEECCSC
T ss_pred EEecccchhhhhHhhhcCCCEEEECCCC
Confidence 666655432111 1479999987543
No 467
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.52 E-value=9.6 Score=28.69 Aligned_cols=76 Identities=16% Similarity=0.144 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCccH---HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-----
Q 028002 68 PGMHALDIGSGTGY---LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~---~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----- 139 (215)
.+.++|-.|++.|. ++..+++. | .+|+.++.++...+...+.+...+ .++.++.+|..+...
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~ 80 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA-G--ASVVVTDLKSEGAEAVAAAIRQAG-------GKAIGLECNVTDEQHREAVI 80 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH-T--CEEEEEESSHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C--CEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHH
Confidence 35688888876652 33344444 3 689999999988877776665533 478888898876211
Q ss_pred -----CCCCccEEEEccCC
Q 028002 140 -----EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 -----~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 81 ~~~~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 81 KAALDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 11478999877653
No 468
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=81.21 E-value=2 Score=34.75 Aligned_cols=85 Identities=11% Similarity=0.010 Sum_probs=54.3
Q ss_pred CCCCEEEEE--cCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCC---CC--
Q 028002 67 KPGMHALDI--GSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRK---GW-- 138 (215)
Q Consensus 67 ~~~~~vLdi--G~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~-- 138 (215)
.++.+||-+ |+|. |..+..+++..| .+|++++.++..++.+++ .+. +.+ +.....+ ..
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~~~~~~~~~----lGa------~~~--~~~~~~~~~~~v~~ 234 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQEQADLLKA----QGA------VHV--CNAASPTFMQDLTE 234 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSHHHHHHHHH----TTC------SCE--EETTSTTHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHh----CCC------cEE--EeCCChHHHHHHHH
Confidence 578899998 5554 777888888876 479999999998888764 332 111 1111111 00
Q ss_pred -CCCCCccEEEEccCCCCchHHHHHhcC
Q 028002 139 -PEFAPYDAIHVGAAAPEIPQALIDQLK 165 (215)
Q Consensus 139 -~~~~~~D~V~~~~~~~~~~~~~~~~Lk 165 (215)
.....+|+|+.........+.+.+.|+
T Consensus 235 ~t~~~g~d~v~d~~g~~~~~~~~~~~l~ 262 (379)
T 3iup_A 235 ALVSTGATIAFDATGGGKLGGQILTCME 262 (379)
T ss_dssp HHHHHCCCEEEESCEEESHHHHHHHHHH
T ss_pred HhcCCCceEEEECCCchhhHHHHHHhcc
Confidence 011369999988776666666666663
No 469
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=81.04 E-value=18 Score=28.43 Aligned_cols=99 Identities=17% Similarity=0.243 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
+..+|.-+|+|. |......+...+-..++..+|+++..++....-+.... . +. .++.+..++ ... ....|+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~--~~-~~~~v~~~~-~~a---~~~aDv 75 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ-A--FT-APKKIYSGE-YSD---CKDADL 75 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG-G--GS-CCCEEEECC-GGG---GTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH-H--hc-CCeEEEECC-HHH---hCCCCE
Confidence 447899999986 44333333332333589999999877664222232211 0 11 344555432 221 245799
Q ss_pred EEEccCCCCch-------------------HHHHHhcCCCcEEEEEeC
Q 028002 147 IHVGAAAPEIP-------------------QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 147 V~~~~~~~~~~-------------------~~~~~~Lk~gG~lv~~~~ 175 (215)
|+.....+.-+ +.+.+ ..|+|++++.++
T Consensus 76 Vii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tN 122 (318)
T 1ez4_A 76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVD-SGFDGIFLVAAN 122 (318)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHH-TTCCSEEEECSS
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEeCC
Confidence 98877553211 12223 379999998543
No 470
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=80.78 E-value=9.6 Score=28.42 Aligned_cols=78 Identities=19% Similarity=0.151 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|+.++.++...+...+.+...+ .++.++.+|+.+...
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-------GTAISVAVDVSDPESAKAMADR 79 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------CcEEEEEccCCCHHHHHHHHHH
Confidence 3578888887654 444444333 112689999999988887777665532 467888888876211
Q ss_pred ---CCCCccEEEEccCC
Q 028002 140 ---EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 80 ~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 80 TLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 11378999887654
No 471
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=80.78 E-value=6.8 Score=29.50 Aligned_cols=77 Identities=18% Similarity=0.147 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|+.++.++..++...+.+...+ .++.++.+|+.+...
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-------GRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEECcCCCHHHHHHHHHH
Confidence 3578888887765 333333332 112689999999988887777666543 478888999875211
Q ss_pred ---CCCCccEEEEccCC
Q 028002 140 ---EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~ 153 (215)
. +..|+++.+...
T Consensus 78 ~~~~-g~id~lv~nAg~ 93 (252)
T 3h7a_A 78 ADAH-APLEVTIFNVGA 93 (252)
T ss_dssp HHHH-SCEEEEEECCCC
T ss_pred HHhh-CCceEEEECCCc
Confidence 1 468988877654
No 472
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=80.77 E-value=18 Score=30.06 Aligned_cols=96 Identities=21% Similarity=0.189 Sum_probs=54.1
Q ss_pred CEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHh-------hcccCc--ccCCCeEEEeCCCCCCC
Q 028002 70 MHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEK-------SAAAPL--LKEGSLSVHVGDGRKGW 138 (215)
Q Consensus 70 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~~~~~--~~~~~v~~~~~d~~~~~ 138 (215)
.+|.-||+|. |. ++..+++. | ..|+++|.++..++.+++.+.. .+.... .......+ ..+. +.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-G--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-G--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KE- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GG-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HH-
Confidence 5799999997 43 34444443 3 6899999999988877664321 110000 00011222 3332 11
Q ss_pred CCCCCccEEEEccCCC-----CchHHHHHhcCCCcEEEEE
Q 028002 139 PEFAPYDAIHVGAAAP-----EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~~-----~~~~~~~~~Lk~gG~lv~~ 173 (215)
....|+|+..-+-. .+...+...++++..++.+
T Consensus 112 --~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~sn 149 (463)
T 1zcj_A 112 --LSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTN 149 (463)
T ss_dssp --GTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred --HCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 14689988776542 2334566778887766543
No 473
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.62 E-value=12 Score=28.25 Aligned_cols=75 Identities=13% Similarity=0.041 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCccH---HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-----
Q 028002 68 PGMHALDIGSGTGY---LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~---~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----- 139 (215)
.+.++|-.|++.|. ++..+++. | .+|+.++.++..++...+.+...+ .++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~ 79 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ-G--ADLVLAARTVERLEDVAKQVTDTG-------RRALSVGTDITDDAQVAHLV 79 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-c--CEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEcCCCCHHHHHHHH
Confidence 46789988887653 33344443 3 689999999988887777665533 478889999876211
Q ss_pred -----CCCCccEEEEccC
Q 028002 140 -----EFAPYDAIHVGAA 152 (215)
Q Consensus 140 -----~~~~~D~V~~~~~ 152 (215)
..+..|+++.+..
T Consensus 80 ~~~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 80 DETMKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHHHHTSCCSEEEECCC
T ss_pred HHHHHHcCCCcEEEECCC
Confidence 1247899987763
No 474
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=80.41 E-value=16 Score=27.73 Aligned_cols=74 Identities=23% Similarity=0.217 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCccH---HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC-----C
Q 028002 68 PGMHALDIGSGTGY---LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW-----P 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~---~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-----~ 139 (215)
+++.+|--|.+.|. .+..+++. | .+|+..|.+.. +.+.+.+...+ .++..+.+|+.+.. .
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~-G--a~Vvi~~r~~~--~~~~~~~~~~g-------~~~~~~~~Dv~d~~~v~~~~ 75 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAA-G--AEVVCAARRAP--DETLDIIAKDG-------GNASALLIDFADPLAAKDSF 75 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-T--CEEEEEESSCC--HHHHHHHHHTT-------CCEEEEECCTTSTTTTTTSS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHc-C--CEEEEEeCCcH--HHHHHHHHHhC-------CcEEEEEccCCCHHHHHHHH
Confidence 46788888877763 33344444 3 78999998754 23333344433 46778888876532 2
Q ss_pred CCCCccEEEEccCC
Q 028002 140 EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 76 ~~g~iDiLVNNAGi 89 (247)
T 4hp8_A 76 TDAGFDILVNNAGI 89 (247)
T ss_dssp TTTCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 33679999888754
No 475
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=80.40 E-value=4.2 Score=32.28 Aligned_cols=44 Identities=30% Similarity=0.342 Sum_probs=32.2
Q ss_pred CCEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHh
Q 028002 69 GMHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEK 115 (215)
Q Consensus 69 ~~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 115 (215)
..+|--||+|+ |. .+..++.. | ..|+.+|++++.++.+.+++..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-G--~~V~l~D~~~~~l~~~~~~i~~ 51 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-G--FRVKLYDIEPRQITGALENIRK 51 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T--CCEEEECSCHHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-C--CeEEEEECCHHHHHHHHHHHHH
Confidence 46899999998 43 44444544 3 7899999999998887766643
No 476
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=80.07 E-value=11 Score=29.24 Aligned_cols=78 Identities=15% Similarity=0.058 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|+.++.++..++.+.+.+...+ .++.++..|+.+...
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-------FDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CceEEEEccCCCHHHHHHHHHH
Confidence 4678898887755 333333332 112689999999998888777766533 478888999876211
Q ss_pred ---CCCCccEEEEccCC
Q 028002 140 ---EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 102 ~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCCc
Confidence 01478999887654
No 477
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.06 E-value=2.5 Score=35.36 Aligned_cols=69 Identities=13% Similarity=0.060 Sum_probs=46.6
Q ss_pred CCEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC----CCCC
Q 028002 69 GMHALDIGSGTGYLTACFALMVG-PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP----EFAP 143 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~ 143 (215)
.++|+-+|||. .+..+++.+. .+..|+.+|.++..++.+.+.+ .+..+.+|..+... .-+.
T Consensus 3 ~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------------~~~~i~Gd~~~~~~L~~Agi~~ 68 (461)
T 4g65_A 3 AMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY------------DLRVVNGHASHPDVLHEAGAQD 68 (461)
T ss_dssp CEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------------SCEEEESCTTCHHHHHHHTTTT
T ss_pred cCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------------CcEEEEEcCCCHHHHHhcCCCc
Confidence 47888888864 4455566553 2368999999999887765432 46788999876311 2256
Q ss_pred ccEEEEcc
Q 028002 144 YDAIHVGA 151 (215)
Q Consensus 144 ~D~V~~~~ 151 (215)
.|++++..
T Consensus 69 ad~~ia~t 76 (461)
T 4g65_A 69 ADMLVAVT 76 (461)
T ss_dssp CSEEEECC
T ss_pred CCEEEEEc
Confidence 88887654
No 478
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=79.95 E-value=11 Score=28.95 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=26.7
Q ss_pred CEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHH
Q 028002 70 MHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQ 111 (215)
Q Consensus 70 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~ 111 (215)
++|.-+|+|. |. ++..+++. | .+|+.+|.++..++..++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g--~~V~~~~r~~~~~~~~~~ 44 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-G--NDVTLIDQWPAHIEAIRK 44 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T--CEEEEECSCHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhC-C--CcEEEEECCHHHHHHHHh
Confidence 5799999986 43 33344443 3 589999999887665543
No 479
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=79.62 E-value=20 Score=28.05 Aligned_cols=97 Identities=19% Similarity=0.264 Sum_probs=52.7
Q ss_pred CEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEEE
Q 028002 70 MHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAIH 148 (215)
Q Consensus 70 ~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V~ 148 (215)
++|.-+|+|. |......+...+...+++.+|+++..++.....+.... . +. .++.+..++ ... ....|+|+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~-~--~~-~~~~v~~~~-~~a---~~~aD~Vi 72 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT-P--FA-HPVWVWAGS-YGD---LEGARAVV 72 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG-G--GS-CCCEEEECC-GGG---GTTEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH-h--hc-CCeEEEECC-HHH---hCCCCEEE
Confidence 3678899876 44333333332334689999999877664222222211 0 11 344555433 221 24689998
Q ss_pred EccCCCCch-------------------HHHHHhcCCCcEEEEEeC
Q 028002 149 VGAAAPEIP-------------------QALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 149 ~~~~~~~~~-------------------~~~~~~Lk~gG~lv~~~~ 175 (215)
.....+.-+ +.+.+. .|+|++++.++
T Consensus 73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tN 117 (310)
T 2xxj_A 73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATN 117 (310)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSS
T ss_pred ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecC
Confidence 876554321 122233 79999998543
No 480
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=79.26 E-value=8.2 Score=29.26 Aligned_cols=79 Identities=19% Similarity=0.164 Sum_probs=49.3
Q ss_pred CCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC------CCC
Q 028002 69 GMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW------PEF 141 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~------~~~ 141 (215)
+.++|-.|++.| ++..+++.+ ....+|+.++.++...+...+.+..... ...+.++.+|..+.. ...
T Consensus 10 ~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 83 (267)
T 3t4x_A 10 GKTALVTGSTAG-IGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-----DAILQPVVADLGTEQGCQDVIEKY 83 (267)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-----TCEEEEEECCTTSHHHHHHHHHHC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----CceEEEEecCCCCHHHHHHHHHhc
Confidence 567888876554 444444333 1126899999999887777666654321 135677888876521 112
Q ss_pred CCccEEEEccCC
Q 028002 142 APYDAIHVGAAA 153 (215)
Q Consensus 142 ~~~D~V~~~~~~ 153 (215)
+..|+++.+...
T Consensus 84 g~id~lv~nAg~ 95 (267)
T 3t4x_A 84 PKVDILINNLGI 95 (267)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578998877653
No 481
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=79.17 E-value=3.6 Score=32.36 Aligned_cols=85 Identities=15% Similarity=0.101 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccE
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDA 146 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (215)
.+.+|.-+|+|. |......++.+| .+|+++|.++.. +.+. .. .+.. .+..+.. ...|+
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~-~~~~----~~---------g~~~--~~l~ell---~~aDv 199 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALG--MNILLYDPYPNE-ERAK----EV---------NGKF--VDLETLL---KESDV 199 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCH-HHHH----HT---------TCEE--CCHHHHH---HHCSE
T ss_pred CCceEEEEccCHHHHHHHHHHHHCC--CEEEEECCCCCh-hhHh----hc---------Cccc--cCHHHHH---hhCCE
Confidence 357899999886 655555555544 689999998765 3221 11 1221 1211111 24688
Q ss_pred EEEccCC----CCch-HHHHHhcCCCcEEEEE
Q 028002 147 IHVGAAA----PEIP-QALIDQLKPGGRMVIP 173 (215)
Q Consensus 147 V~~~~~~----~~~~-~~~~~~Lk~gG~lv~~ 173 (215)
|+...+. .+++ +.....+|+|++++-.
T Consensus 200 V~l~~p~~~~t~~li~~~~l~~mk~ga~lin~ 231 (307)
T 1wwk_A 200 VTIHVPLVESTYHLINEERLKLMKKTAILINT 231 (307)
T ss_dssp EEECCCCSTTTTTCBCHHHHHHSCTTCEEEEC
T ss_pred EEEecCCChHHhhhcCHHHHhcCCCCeEEEEC
Confidence 8777654 2344 5677889998877654
No 482
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=78.99 E-value=20 Score=27.57 Aligned_cols=92 Identities=15% Similarity=0.203 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCccHHHHHH-HHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCcc
Q 028002 67 KPGMHALDIGSGTGYLTACF-ALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYD 145 (215)
Q Consensus 67 ~~~~~vLdiG~G~G~~~~~l-~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D 145 (215)
..+.++|-+|+|...-+... +...|. .+++.++.+.+..+...+.+.... ....+.. . ......+|
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~-~~i~i~nRt~~ra~~la~~~~~~~-------~~~~~~~-~----~~~~~~~d 189 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGI-ASITLCDPSTARMGAVCELLGNGF-------PGLTVST-Q----FSGLEDFD 189 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHHC-------TTCEEES-C----CSCSTTCS
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCC-CeEEEeCCCHHHHHHHHHHHhccC-------Ccceehh-h----hhhhhccc
Confidence 34689999999975443333 333344 689999999887766655554432 2222211 1 11225689
Q ss_pred EEEEccCCC-------CchHHHHHhcCCCcEEE
Q 028002 146 AIHVGAAAP-------EIPQALIDQLKPGGRMV 171 (215)
Q Consensus 146 ~V~~~~~~~-------~~~~~~~~~Lk~gG~lv 171 (215)
+|+...+.- .+.......++++..++
T Consensus 190 liiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~ 222 (269)
T 3tum_A 190 LVANASPVGMGTRAELPLSAALLATLQPDTLVA 222 (269)
T ss_dssp EEEECSSTTCSTTCCCSSCHHHHHTCCTTSEEE
T ss_pred ccccCCccccCCCCCCCCChHHHhccCCCcEEE
Confidence 998766531 13355667788777553
No 483
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=78.80 E-value=8.1 Score=28.76 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=47.8
Q ss_pred CCCCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC------
Q 028002 66 LKPGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW------ 138 (215)
Q Consensus 66 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~------ 138 (215)
..++.+||-.|++.| ++..+++.+ ....+|+.++.++..++...+.+. .++.+..+|..+..
T Consensus 11 ~~~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~ 79 (249)
T 3f9i_A 11 DLTGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----------DNYTIEVCNLANKEECSNLI 79 (249)
T ss_dssp CCTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------SSEEEEECCTTSHHHHHHHH
T ss_pred cCCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----------cCccEEEcCCCCHHHHHHHH
Confidence 345678888887654 444444333 112689999999887766654432 36778888876521
Q ss_pred CCCCCccEEEEccCC
Q 028002 139 PEFAPYDAIHVGAAA 153 (215)
Q Consensus 139 ~~~~~~D~V~~~~~~ 153 (215)
...+..|+++.+...
T Consensus 80 ~~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 80 SKTSNLDILVCNAGI 94 (249)
T ss_dssp HTCSCCSEEEECCC-
T ss_pred HhcCCCCEEEECCCC
Confidence 122468998877653
No 484
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=78.60 E-value=6.6 Score=32.62 Aligned_cols=79 Identities=11% Similarity=0.063 Sum_probs=46.7
Q ss_pred CCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecCh-------------------HHHHHHHHHHHhhcccCcccCCCeE
Q 028002 69 GMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIP-------------------ELVVSSIQNIEKSAAAPLLKEGSLS 128 (215)
Q Consensus 69 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~-------------------~~~~~a~~~~~~~~~~~~~~~~~v~ 128 (215)
..+||-+|||. |......+.+.|- ++++.+|.+. ...+.+++++....- .-+++
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGv-g~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp-----~v~v~ 113 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGF-RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP-----NCNVV 113 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTC-CCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHST-----TCCCE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC-CEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCC-----CCEEE
Confidence 46899999986 6555444444455 7899998543 235566666665321 13455
Q ss_pred EEeCCCCCCCC-CCCCccEEEEccCC
Q 028002 129 VHVGDGRKGWP-EFAPYDAIHVGAAA 153 (215)
Q Consensus 129 ~~~~d~~~~~~-~~~~~D~V~~~~~~ 153 (215)
.....+..... ....||+|+....-
T Consensus 114 ~~~~~i~~~~~~~~~~~DlVi~~~Dn 139 (434)
T 1tt5_B 114 PHFNKIQDFNDTFYRQFHIIVCGLDS 139 (434)
T ss_dssp EEESCGGGBCHHHHTTCSEEEECCSC
T ss_pred EEecccchhhHHHhcCCCEEEECCCC
Confidence 55554433211 11469999877543
No 485
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=78.55 E-value=9.7 Score=28.71 Aligned_cols=78 Identities=18% Similarity=0.115 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 139 (215)
.+.++|-.|++. .++..+++.+ ....+|+.++.++..++...+.+...+ .++.++..|+.+...
T Consensus 28 ~~k~vlITGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 28 SGQVAVVTGASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-------GEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TTCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-------CceeEEEecCCCHHHHHHHHHH
Confidence 357888888654 4444444433 112689999999988887777665533 468888888875211
Q ss_pred ---CCCCccEEEEccCC
Q 028002 140 ---EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 100 ~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 11468999877654
No 486
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=78.50 E-value=13 Score=27.33 Aligned_cols=71 Identities=18% Similarity=0.240 Sum_probs=44.8
Q ss_pred CCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCe-EEEeCCCCCCCC-CCCCcc
Q 028002 69 GMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSL-SVHVGDGRKGWP-EFAPYD 145 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v-~~~~~d~~~~~~-~~~~~D 145 (215)
+++||-.|+ +|.++..+++.+ ....+|++++.++...+.... .++ .++.+|+.+... ..+..|
T Consensus 21 ~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 21 GMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred CCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------------CCCceEEEcccHHHHHHHHcCCC
Confidence 678998885 455555554443 112689999998876543321 356 788888862221 124789
Q ss_pred EEEEccCC
Q 028002 146 AIHVGAAA 153 (215)
Q Consensus 146 ~V~~~~~~ 153 (215)
+|+.....
T Consensus 87 ~vi~~ag~ 94 (236)
T 3e8x_A 87 AVVFAAGS 94 (236)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99877754
No 487
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=78.31 E-value=10 Score=29.02 Aligned_cols=86 Identities=17% Similarity=0.086 Sum_probs=48.0
Q ss_pred CEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 70 MHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 70 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
++|.-||+|. |. ++..+++. +...+|+++|.++...+.+.+ .+. ......+..+.. ...|+|
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~----~g~--------~~~~~~~~~~~~---~~aDvV 70 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-HPHYKIVGYNRSDRSRDIALE----RGI--------VDEATADFKVFA---ALADVI 70 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSSHHHHHHHHH----TTS--------CSEEESCTTTTG---GGCSEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-CCCcEEEEEcCCHHHHHHHHH----cCC--------cccccCCHHHhh---cCCCEE
Confidence 5799999987 43 44444544 333689999999887665533 221 001122222211 357988
Q ss_pred EEccCCCC---chHHHHHh-cCCCcEEE
Q 028002 148 HVGAAAPE---IPQALIDQ-LKPGGRMV 171 (215)
Q Consensus 148 ~~~~~~~~---~~~~~~~~-Lk~gG~lv 171 (215)
+...+... +.+.+... ++++..++
T Consensus 71 ilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 71 ILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp EECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred EEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 87765543 33444555 66655444
No 488
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=78.17 E-value=12 Score=28.62 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 139 (215)
.+.++|-.|++.| ++..+++.+ ....+|+.++.++..++...+.+...+ .++.++.+|+.+...
T Consensus 23 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~d~~~v~~~~~~ 94 (279)
T 3sju_A 23 RPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG-------HDVDGSSCDVTSTDEVHAAVAA 94 (279)
T ss_dssp --CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHHHH
Confidence 3678888887654 333333332 112689999999988877776665433 478888899876211
Q ss_pred ---CCCCccEEEEccCC
Q 028002 140 ---EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 95 ~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 95 AVERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHHCSCCEEEECCCC
T ss_pred HHHHcCCCcEEEECCCC
Confidence 11478999887654
No 489
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=78.06 E-value=4 Score=32.01 Aligned_cols=95 Identities=15% Similarity=0.188 Sum_probs=47.5
Q ss_pred CEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 70 MHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 70 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
++|.-+|+|. |. ++..+++. | .+|+.++.++ .+. +...+..-........+..............+|+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g--~~V~~~~r~~--~~~----i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~v 73 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-G--EDVHFLLRRD--YEA----IAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLV 73 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-S--CCEEEECSTT--HHH----HHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-C--CeEEEEEcCc--HHH----HHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEE
Confidence 4688999997 43 44445544 3 5799999876 232 23322210000011111000000111111468999
Q ss_pred EEccCCC---CchHHHHHhcCCCcEEEEE
Q 028002 148 HVGAAAP---EIPQALIDQLKPGGRMVIP 173 (215)
Q Consensus 148 ~~~~~~~---~~~~~~~~~Lk~gG~lv~~ 173 (215)
+..-... .+.+.+...++++..++..
T Consensus 74 ilavk~~~~~~~l~~l~~~l~~~~~iv~l 102 (312)
T 3hn2_A 74 LVGLKTFANSRYEELIRPLVEEGTQILTL 102 (312)
T ss_dssp EECCCGGGGGGHHHHHGGGCCTTCEEEEC
T ss_pred EEecCCCCcHHHHHHHHhhcCCCCEEEEe
Confidence 8776543 3456667778877665543
No 490
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=77.83 E-value=8.3 Score=30.27 Aligned_cols=95 Identities=17% Similarity=0.197 Sum_probs=48.7
Q ss_pred CCEEEEEcCCc-c-HHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEe-CCCCCCCCCCCCcc
Q 028002 69 GMHALDIGSGT-G-YLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHV-GDGRKGWPEFAPYD 145 (215)
Q Consensus 69 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~~D 145 (215)
.++|.-+|+|. | .++..+++. | ..|+.+ .+++.++..++. +.. .......+.. ............+|
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~-G--~~V~l~-~~~~~~~~i~~~----g~~--~~~~~~~~~~~~~~~~~~~~~~~~D 88 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA-G--HEVILI-ARPQHVQAIEAT----GLR--LETQSFDEQVKVSASSDPSAVQGAD 88 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT-T--CEEEEE-CCHHHHHHHHHH----CEE--EECSSCEEEECCEEESCGGGGTTCS
T ss_pred CCcEEEECcCHHHHHHHHHHHHC-C--CeEEEE-EcHhHHHHHHhC----CeE--EEcCCCcEEEeeeeeCCHHHcCCCC
Confidence 46899999997 4 344445544 3 578988 888776665442 211 0001111110 00001111124689
Q ss_pred EEEEccCCCCch---HHHHHhcCCCcEEEEE
Q 028002 146 AIHVGAAAPEIP---QALIDQLKPGGRMVIP 173 (215)
Q Consensus 146 ~V~~~~~~~~~~---~~~~~~Lk~gG~lv~~ 173 (215)
+|+..-....+. +.+...++++..++..
T Consensus 89 ~vilavk~~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 89 LVLFCVKSTDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp EEEECCCGGGHHHHHHHHTTTSCTTCEEEEE
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCCEEEEe
Confidence 998776655433 3445566666555443
No 491
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=77.59 E-value=3.8 Score=31.89 Aligned_cols=48 Identities=13% Similarity=0.065 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHh
Q 028002 67 KPGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEK 115 (215)
Q Consensus 67 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 115 (215)
-.+.++|-+|+|. |......+...|. .+++.++.+.+..+...+.+..
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~-~~v~i~~R~~~~a~~la~~~~~ 173 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGV-QKLQVADLDTSRAQALADVINN 173 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHh
Confidence 3468999999973 2222222222243 4799999998877766555554
No 492
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=77.54 E-value=14 Score=28.94 Aligned_cols=80 Identities=11% Similarity=0.105 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-------
Q 028002 68 PGMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 139 (215)
.+.+||-.|++.| ++..+++.+ ....+|++++.++..++.+.+.+...+.. .++.++..|+.+...
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG-----PEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG-----GGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-----CeEEEEECCCCCHHHHHHHHHH
Confidence 3568898887765 333333333 11268999999998888777766554321 378888999876210
Q ss_pred ---CCCCccEEEEccCC
Q 028002 140 ---EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ---~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 81 ~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHTCCEEEEEECCCC
T ss_pred HHHhCCCCCEEEECCCc
Confidence 11468999887753
No 493
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=77.53 E-value=23 Score=27.53 Aligned_cols=78 Identities=15% Similarity=0.086 Sum_probs=42.7
Q ss_pred CEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 70 MHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 70 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
++|.-+|+|. |. ++..++.. +...+++.+|.++..++.....+..... .....+.+...+. .. ....|+|
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~d~-~~---~~~aDvV 73 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANEAKVKADQIDFQDAMA---NLEAHGNIVINDW-AA---LADADVV 73 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHGG---GSSSCCEEEESCG-GG---GTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCHHHHHHHHHHHHhhhh---hcCCCeEEEeCCH-HH---hCCCCEE
Confidence 4688899887 43 33334443 3224899999998877655443321110 0012344433443 21 2468999
Q ss_pred EEccCCCC
Q 028002 148 HVGAAAPE 155 (215)
Q Consensus 148 ~~~~~~~~ 155 (215)
+.....+.
T Consensus 74 iiav~~~~ 81 (309)
T 1hyh_A 74 ISTLGNIK 81 (309)
T ss_dssp EECCSCGG
T ss_pred EEecCCcc
Confidence 87766543
No 494
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.47 E-value=9.2 Score=29.12 Aligned_cols=86 Identities=17% Similarity=0.129 Sum_probs=47.5
Q ss_pred CEEEEEcCCc-cH-HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCCCCCCccEE
Q 028002 70 MHALDIGSGT-GY-LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWPEFAPYDAI 147 (215)
Q Consensus 70 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~V 147 (215)
++|.-+|+|. |. ++..+++. | .+|+++|.++..++.+.+ .+. .. . ...+..+. ...|+|
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g--~~V~~~~~~~~~~~~~~~----~g~------~~-~-~~~~~~~~----~~~D~v 61 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR-G--HYLIGVSRQQSTCEKAVE----RQL------VD-E-AGQDLSLL----QTAKII 61 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T--CEEEEECSCHHHHHHHHH----TTS------CS-E-EESCGGGG----TTCSEE
T ss_pred CEEEEEcCcHHHHHHHHHHHHC-C--CEEEEEECCHHHHHHHHh----CCC------Cc-c-ccCCHHHh----CCCCEE
Confidence 3678899886 43 33334433 3 489999999887665432 221 10 1 12222221 357999
Q ss_pred EEccCCCC---chHHHHHhcCCCcEEEEEeC
Q 028002 148 HVGAAAPE---IPQALIDQLKPGGRMVIPVG 175 (215)
Q Consensus 148 ~~~~~~~~---~~~~~~~~Lk~gG~lv~~~~ 175 (215)
+...+... +.+.+...++++..+ +++.
T Consensus 62 i~av~~~~~~~~~~~l~~~~~~~~~v-v~~~ 91 (279)
T 2f1k_A 62 FLCTPIQLILPTLEKLIPHLSPTAIV-TDVA 91 (279)
T ss_dssp EECSCHHHHHHHHHHHGGGSCTTCEE-EECC
T ss_pred EEECCHHHHHHHHHHHHhhCCCCCEE-EECC
Confidence 87766432 334455567776654 5553
No 495
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=77.39 E-value=11 Score=28.64 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=49.6
Q ss_pred CCEEEEEcCCccHHHHHHHHHh-CCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC--------
Q 028002 69 GMHALDIGSGTGYLTACFALMV-GPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP-------- 139 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------- 139 (215)
+.++|-.|++.| ++..+++.+ ....+|+.++.++..++...+.+...+ .++.++.+|+.+...
T Consensus 4 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 4 DKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-------GTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEcCCCCHHHHHHHHHHH
Confidence 467888887654 344443333 112689999999988887777665533 467788888875211
Q ss_pred --CCCCccEEEEccCC
Q 028002 140 --EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 --~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 76 ~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 11468998877653
No 496
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=77.36 E-value=14 Score=29.02 Aligned_cols=92 Identities=12% Similarity=-0.030 Sum_probs=56.4
Q ss_pred CCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCC----CCCCCc
Q 028002 69 GMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGW----PEFAPY 144 (215)
Q Consensus 69 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~~ 144 (215)
..+++-+|+ |..+..+++.+...+.++.+|.+++.++ +++ ..+.++.+|..+.. ...+.+
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~-------------~~~~~i~gd~~~~~~L~~a~i~~a 178 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR-------------SGANFVHGDPTRVSDLEKANVRGA 178 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH-------------TTCEEEESCTTSHHHHHHTCSTTE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh-------------CCcEEEEeCCCCHHHHHhcChhhc
Confidence 457888887 5566666665532222999999998877 542 35788999987531 123578
Q ss_pred cEEEEccCCCCch---HHHHHhcCCCcEEEEEeCC
Q 028002 145 DAIHVGAAAPEIP---QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 145 D~V~~~~~~~~~~---~~~~~~Lk~gG~lv~~~~~ 176 (215)
|.|++...-+..- -...+.+.|...++.-..+
T Consensus 179 ~~vi~~~~~d~~n~~~~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 179 RAVIVDLESDSETIHCILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCTTSEEEEECSS
T ss_pred cEEEEcCCccHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 8888765433211 2334566676666665433
No 497
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.23 E-value=13 Score=27.91 Aligned_cols=77 Identities=17% Similarity=0.098 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-CccH---HHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC----
Q 028002 68 PGMHALDIGS-GTGY---LTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP---- 139 (215)
Q Consensus 68 ~~~~vLdiG~-G~G~---~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---- 139 (215)
.+.++|-.|+ |+|. ++..+++. | .+|+.++.++...+...+.+.... ..++.++.+|+.+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G--~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~~~v~~~ 91 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-G--ADVVISDYHERRLGETRDQLADLG------LGRVEAVVCDVTSTEAVDAL 91 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHTTC------SSCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-C--CEEEEecCCHHHHHHHHHHHHhcC------CCceEEEEeCCCCHHHHHHH
Confidence 3578888887 5542 33344444 3 689999999988877776665432 1478899999876211
Q ss_pred ------CCCCccEEEEccCC
Q 028002 140 ------EFAPYDAIHVGAAA 153 (215)
Q Consensus 140 ------~~~~~D~V~~~~~~ 153 (215)
..+..|+++.+...
T Consensus 92 ~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 92 ITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhCCCcEEEECCCc
Confidence 11468999887754
No 498
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=77.10 E-value=26 Score=27.87 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE-eCCCCCCCCCCCCcc
Q 028002 68 PGMHALDIGSGT-GYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH-VGDGRKGWPEFAPYD 145 (215)
Q Consensus 68 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~-~~d~~~~~~~~~~~D 145 (215)
+..+|.-+|+|. |......+...+--..++.+|++++.++--..-+..... +. ....+. ..|... ....|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~---~~-~~~~i~~t~d~~~----~~daD 91 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL---FL-HTAKIVSGKDYSV----SAGSK 91 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG---GS-CCSEEEEESSSCS----CSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh---cc-cCCeEEEcCCHHH----hCCCC
Confidence 557999999986 543333333324335899999998766543333332111 11 122333 334332 25679
Q ss_pred EEEEccCCCC--------ch-----------HHHHHhcCCCcEEEEEeCC
Q 028002 146 AIHVGAAAPE--------IP-----------QALIDQLKPGGRMVIPVGN 176 (215)
Q Consensus 146 ~V~~~~~~~~--------~~-----------~~~~~~Lk~gG~lv~~~~~ 176 (215)
+|+.....+. +. +.+.+. .|++++++.++.
T Consensus 92 iVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNP 140 (330)
T 3ldh_A 92 LVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPEL 140 (330)
T ss_dssp EEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCc
Confidence 9887754421 11 234444 899998886543
No 499
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=76.25 E-value=18 Score=26.96 Aligned_cols=77 Identities=10% Similarity=0.071 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHHhC-CCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEEeCCCCCCCC-------
Q 028002 68 PGMHALDIGSGTGYLTACFALMVG-PQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVHVGDGRKGWP------- 139 (215)
Q Consensus 68 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 139 (215)
.+.++|-.|++ |.++..+++.+- ...+|++++.++...+...+.+...+ .++.++.+|..+...
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~~~~~~~~~~~~ 83 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-------HDVSSVVMDVTNTESVQNAVRS 83 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEecCCCHHHHHHHHHH
Confidence 35688888865 445554544331 12689999999877666555554422 468888899875211
Q ss_pred ---CCCCccEEEEccC
Q 028002 140 ---EFAPYDAIHVGAA 152 (215)
Q Consensus 140 ---~~~~~D~V~~~~~ 152 (215)
..+.+|+|+.+..
T Consensus 84 ~~~~~~~id~vi~~Ag 99 (260)
T 3awd_A 84 VHEQEGRVDILVACAG 99 (260)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 0136899887764
No 500
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.21 E-value=12 Score=31.16 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHHHhhcccCcccCCCeEEE
Q 028002 51 APHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVVSSIQNIEKSAAAPLLKEGSLSVH 130 (215)
Q Consensus 51 ~~~~~~~~l~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~v~~~ 130 (215)
.+.....+...+....++-.+|+-+|.|. .+..+++.+.....+..+|.++..++...+.+ ++..++
T Consensus 217 ~~~~i~~~~~~~g~~~~~~~~v~I~GgG~--ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l-----------~~~~Vi 283 (461)
T 4g65_A 217 ASNHIRSVMSELQRLEKPYRRIMIVGGGN--IGASLAKRLEQTYSVKLIERNLQRAEKLSEEL-----------ENTIVF 283 (461)
T ss_dssp ETTTHHHHHHHTTGGGSCCCEEEEECCSH--HHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC-----------TTSEEE
T ss_pred ccchHHHHHHhhccccccccEEEEEcchH--HHHHHHHHhhhcCceEEEecCHHHHHHHHHHC-----------CCceEE
Confidence 33345666666654445567888888765 44555666655578999999999888776553 567899
Q ss_pred eCCCCCCC--C--CCCCccEEEEccC
Q 028002 131 VGDGRKGW--P--EFAPYDAIHVGAA 152 (215)
Q Consensus 131 ~~d~~~~~--~--~~~~~D~V~~~~~ 152 (215)
++|..+.. . .-+.+|++++...
T Consensus 284 ~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 284 CGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp ESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred eccccchhhHhhcCchhhcEEEEccc
Confidence 99998631 1 2256898887653
Done!