Query 028010
Match_columns 215
No_of_seqs 195 out of 1825
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 07:21:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gud_A Imidazole glycerol phos 100.0 5.3E-36 1.8E-40 244.0 6.6 182 2-210 4-193 (211)
2 2iss_D Glutamine amidotransfer 100.0 6.9E-33 2.4E-37 225.7 11.4 183 1-215 21-203 (208)
3 2nv0_A Glutamine amidotransfer 100.0 1.1E-31 3.6E-36 216.3 12.5 180 1-215 2-183 (196)
4 2ywd_A Glutamine amidotransfer 100.0 5.8E-32 2E-36 216.7 10.9 181 1-215 3-185 (191)
5 2ywj_A Glutamine amidotransfer 100.0 5.3E-32 1.8E-36 216.4 10.1 174 1-213 1-177 (186)
6 2abw_A PDX2 protein, glutamina 100.0 3.7E-32 1.3E-36 223.9 8.8 195 1-215 4-209 (227)
7 1ka9_H Imidazole glycerol phos 100.0 1.1E-31 3.8E-36 217.1 9.5 178 1-209 3-185 (200)
8 1gpw_B Amidotransferase HISH; 100.0 1.9E-31 6.5E-36 215.7 9.5 173 1-209 1-185 (201)
9 1jvn_A Glutamine, bifunctional 100.0 6.5E-31 2.2E-35 242.0 10.2 191 1-214 5-210 (555)
10 1q7r_A Predicted amidotransfer 100.0 6E-31 2.1E-35 215.8 8.3 180 1-215 24-205 (219)
11 3m3p_A Glutamine amido transfe 100.0 1.1E-29 3.9E-34 212.3 8.5 170 1-209 4-183 (250)
12 3l7n_A Putative uncharacterize 100.0 3.7E-29 1.3E-33 207.4 9.8 169 1-207 1-184 (236)
13 1qdl_B Protein (anthranilate s 100.0 7.3E-29 2.5E-33 199.9 9.2 165 1-207 1-180 (195)
14 2a9v_A GMP synthase; structura 99.9 2E-28 6.7E-33 200.1 7.6 162 1-207 14-184 (212)
15 3d54_D Phosphoribosylformylgly 99.9 1.1E-27 3.7E-32 194.7 11.8 174 1-208 3-192 (213)
16 1wl8_A GMP synthase [glutamine 99.9 4.7E-28 1.6E-32 194.0 8.2 161 1-207 1-171 (189)
17 1o1y_A Conserved hypothetical 99.9 2.3E-27 7.8E-32 197.1 8.8 163 2-208 14-191 (239)
18 2vpi_A GMP synthase; guanine m 99.9 3.1E-27 1.1E-31 193.8 3.9 159 2-207 26-194 (218)
19 1i1q_B Anthranilate synthase c 99.9 2.5E-26 8.5E-31 184.6 8.6 159 1-206 1-173 (192)
20 3uow_A GMP synthetase; structu 99.9 9.3E-26 3.2E-30 207.6 11.4 190 1-208 8-215 (556)
21 3tqi_A GMP synthase [glutamine 99.9 4.4E-26 1.5E-30 208.7 7.2 161 2-208 12-190 (527)
22 1gpm_A GMP synthetase, XMP ami 99.9 4.7E-26 1.6E-30 208.4 3.7 162 1-208 8-187 (525)
23 3fij_A LIN1909 protein; 11172J 99.9 1.1E-24 3.8E-29 182.4 8.7 168 13-208 31-224 (254)
24 2ywb_A GMP synthase [glutamine 99.9 1.5E-25 5.3E-30 204.1 3.6 160 2-208 1-170 (503)
25 1a9x_B Carbamoyl phosphate syn 99.9 2.4E-23 8.3E-28 182.9 13.3 153 1-207 191-357 (379)
26 3r75_A Anthranilate/para-amino 99.9 2.2E-23 7.4E-28 194.4 9.0 164 1-208 447-619 (645)
27 2w7t_A CTP synthetase, putativ 99.9 2.3E-23 7.8E-28 176.2 4.3 182 2-209 10-240 (273)
28 1l9x_A Gamma-glutamyl hydrolas 99.9 1.3E-22 4.4E-27 174.8 7.4 170 2-207 32-246 (315)
29 2vxo_A GMP synthase [glutamine 99.9 4.6E-23 1.6E-27 193.6 2.6 159 2-207 31-199 (697)
30 2h2w_A Homoserine O-succinyltr 99.8 1E-20 3.4E-25 162.1 9.5 168 1-208 48-252 (312)
31 2vdj_A Homoserine O-succinyltr 99.8 8.5E-21 2.9E-25 162.0 8.6 169 1-208 36-241 (301)
32 2v4u_A CTP synthase 2; pyrimid 99.8 5.8E-21 2E-25 162.7 1.8 85 1-90 26-138 (289)
33 1vco_A CTP synthetase; tetrame 99.7 1.7E-19 5.9E-24 164.7 0.9 78 8-90 312-403 (550)
34 3nva_A CTP synthase; rossman f 99.7 7.2E-17 2.5E-21 145.7 6.1 85 2-91 295-399 (535)
35 3ugj_A Phosphoribosylformylgly 99.6 7E-15 2.4E-19 145.3 13.8 86 1-87 1048-1152(1303)
36 1s1m_A CTP synthase; CTP synth 99.6 3.1E-16 1.1E-20 143.2 2.5 78 8-90 301-391 (545)
37 1fy2_A Aspartyl dipeptidase; s 99.5 6.5E-15 2.2E-19 121.2 3.8 107 2-109 33-157 (229)
38 3l4e_A Uncharacterized peptida 99.4 2.4E-13 8.2E-18 110.2 4.9 107 2-109 29-161 (206)
39 1oi4_A Hypothetical protein YH 99.2 7.5E-11 2.6E-15 94.1 8.6 85 1-87 24-134 (193)
40 3l18_A Intracellular protease 99.1 2.7E-10 9.1E-15 88.6 8.3 85 1-87 3-111 (168)
41 4hcj_A THIJ/PFPI domain protei 98.9 1.5E-09 5.1E-14 85.7 6.1 84 2-87 10-117 (177)
42 2ab0_A YAJL; DJ-1/THIJ superfa 98.9 3.2E-09 1.1E-13 85.4 7.7 85 2-87 4-116 (205)
43 4e08_A DJ-1 beta; flavodoxin-l 98.9 5.2E-09 1.8E-13 83.0 8.6 85 2-87 7-116 (190)
44 3er6_A Putative transcriptiona 98.9 4E-09 1.4E-13 85.2 6.9 86 2-87 10-124 (209)
45 2rk3_A Protein DJ-1; parkinson 98.8 6.3E-09 2.1E-13 83.0 7.7 85 2-87 5-115 (197)
46 2vrn_A Protease I, DR1199; cys 98.8 1.1E-08 3.8E-13 80.9 7.9 86 1-87 10-124 (190)
47 2fex_A Conserved hypothetical 98.8 2.8E-08 9.5E-13 78.6 9.4 83 2-87 3-110 (188)
48 3efe_A THIJ/PFPI family protei 98.8 1.3E-08 4.3E-13 82.4 7.4 83 2-87 7-121 (212)
49 3f5d_A Protein YDEA; unknow pr 98.7 2.1E-08 7.1E-13 80.9 7.6 82 2-87 5-109 (206)
50 3mgk_A Intracellular protease/ 98.7 1.4E-08 4.8E-13 82.1 6.3 85 1-87 5-113 (211)
51 3noq_A THIJ/PFPI family protei 98.7 1.8E-08 6.1E-13 82.7 6.9 84 2-87 7-113 (231)
52 3ot1_A 4-methyl-5(B-hydroxyeth 98.7 1.7E-08 5.8E-13 81.3 6.0 85 2-87 11-121 (208)
53 3uk7_A Class I glutamine amido 98.6 7.1E-08 2.4E-12 84.8 8.4 84 2-87 14-137 (396)
54 3gra_A Transcriptional regulat 98.6 4.9E-08 1.7E-12 78.4 6.4 82 2-87 7-117 (202)
55 3ewn_A THIJ/PFPI family protei 98.6 9.8E-08 3.3E-12 79.4 7.6 85 1-87 24-133 (253)
56 1vhq_A Enhancing lycopene bios 98.6 8.9E-08 3E-12 78.3 6.8 87 2-88 8-150 (232)
57 3cne_A Putative protease I; st 98.6 8E-08 2.8E-12 74.9 6.3 87 1-87 3-120 (175)
58 3ej6_A Catalase-3; heme, hydro 98.5 1.6E-07 5.3E-12 87.5 8.3 88 1-88 538-647 (688)
59 3uk7_A Class I glutamine amido 98.5 2.2E-07 7.6E-12 81.6 8.8 85 1-87 206-330 (396)
60 3fse_A Two-domain protein cont 98.5 2E-07 6.9E-12 81.3 8.3 84 2-87 12-121 (365)
61 3l3b_A ES1 family protein; ssg 98.5 1.4E-07 4.9E-12 77.9 6.8 87 2-88 25-168 (242)
62 3ttv_A Catalase HPII; heme ori 98.5 9.4E-08 3.2E-12 89.6 5.6 85 1-88 601-709 (753)
63 1u9c_A APC35852; structural ge 98.5 2.7E-07 9.2E-12 74.7 6.8 85 2-87 7-138 (224)
64 4gdh_A DJ-1, uncharacterized p 98.4 3.8E-07 1.3E-11 72.7 6.6 85 1-86 5-122 (194)
65 1sy7_A Catalase 1; heme oxidat 98.3 1.2E-06 4E-11 82.4 8.6 87 1-88 535-645 (715)
66 3kkl_A Probable chaperone prot 98.3 1.2E-06 4.2E-11 72.3 6.8 50 37-87 98-147 (244)
67 3n7t_A Macrophage binding prot 98.3 1.5E-06 5.1E-11 71.9 7.1 50 37-87 105-154 (247)
68 2iuf_A Catalase; oxidoreductas 98.3 8.7E-07 3E-11 82.6 6.1 87 1-87 530-648 (688)
69 1rw7_A YDR533CP; alpha-beta sa 98.2 1.6E-06 5.6E-11 71.3 6.4 51 37-88 98-148 (243)
70 1n57_A Chaperone HSP31, protei 98.1 2.9E-06 9.9E-11 71.8 6.4 53 35-88 143-195 (291)
71 3bhn_A THIJ/PFPI domain protei 98.1 8.4E-07 2.9E-11 72.9 2.7 82 2-87 22-128 (236)
72 3en0_A Cyanophycinase; serine 97.8 1.6E-05 5.5E-10 67.3 4.1 105 2-106 58-190 (291)
73 2gk3_A Putative cytoplasmic pr 95.7 0.026 9E-07 46.3 7.2 70 8-77 38-124 (256)
74 1z0s_A Probable inorganic poly 94.1 0.047 1.6E-06 45.6 4.5 69 1-80 30-100 (278)
75 4e5v_A Putative THUA-like prot 92.6 0.33 1.1E-05 40.4 7.3 61 15-81 25-96 (281)
76 2i2c_A Probable inorganic poly 90.4 0.33 1.1E-05 40.0 5.0 64 1-81 1-71 (272)
77 3rht_A (gatase1)-like protein; 90.0 0.73 2.5E-05 37.9 6.7 70 2-77 6-85 (259)
78 2zuv_A Lacto-N-biose phosphory 88.0 0.66 2.3E-05 43.2 5.5 63 15-79 473-544 (759)
79 1eiw_A Hypothetical protein MT 86.9 1.6 5.4E-05 31.1 5.9 64 5-78 8-74 (111)
80 3tty_A Beta-GAL, beta-galactos 86.6 2.2 7.4E-05 39.8 8.3 58 14-78 429-486 (675)
81 2r47_A Uncharacterized protein 86.4 0.078 2.7E-06 40.3 -1.3 43 36-79 83-125 (157)
82 1u0t_A Inorganic polyphosphate 86.2 1.6 5.5E-05 36.4 6.6 69 2-80 6-108 (307)
83 1t0b_A THUA-like protein; treh 85.6 1.5 5E-05 35.8 5.9 61 16-80 38-106 (252)
84 3kbq_A Protein TA0487; structu 81.9 1.3 4.5E-05 34.1 3.9 48 1-48 4-73 (172)
85 2an1_A Putative kinase; struct 80.9 1.3 4.5E-05 36.5 3.8 69 2-80 7-96 (292)
86 3nq4_A 6,7-dimethyl-8-ribityll 80.7 7.5 0.00026 29.3 7.6 76 1-77 13-116 (156)
87 2i0f_A 6,7-dimethyl-8-ribityll 80.3 5 0.00017 30.3 6.5 86 1-87 13-130 (157)
88 3eag_A UDP-N-acetylmuramate:L- 78.0 10 0.00036 31.5 8.6 79 1-79 5-115 (326)
89 2c92_A 6,7-dimethyl-8-ribityll 75.8 7.9 0.00027 29.3 6.5 75 1-76 18-115 (160)
90 4hv4_A UDP-N-acetylmuramate--L 75.3 10 0.00036 33.6 8.3 87 2-89 24-145 (494)
91 1hqk_A 6,7-dimethyl-8-ribityll 69.9 16 0.00056 27.4 7.0 75 1-76 13-114 (154)
92 1c2y_A Protein (lumazine synth 68.8 11 0.00038 28.4 5.8 76 1-77 14-115 (156)
93 3lk7_A UDP-N-acetylmuramoylala 68.2 15 0.00052 32.0 7.5 30 2-31 11-40 (451)
94 1yt5_A Inorganic polyphosphate 67.1 2.1 7E-05 34.8 1.5 68 1-80 1-73 (258)
95 3hly_A Flavodoxin-like domain; 66.9 7 0.00024 29.0 4.4 74 1-78 1-89 (161)
96 3iwt_A 178AA long hypothetical 66.3 14 0.00049 27.8 6.2 48 1-48 16-92 (178)
97 1y5e_A Molybdenum cofactor bio 66.1 7.7 0.00026 29.3 4.6 48 1-48 14-83 (169)
98 3pfn_A NAD kinase; structural 65.6 22 0.00074 30.6 7.7 70 2-81 40-142 (365)
99 1kz1_A 6,7-dimethyl-8-ribityll 64.9 23 0.00078 26.7 6.9 76 1-77 18-121 (159)
100 2qv7_A Diacylglycerol kinase D 62.5 20 0.00068 29.9 6.9 78 2-89 26-125 (337)
101 1f4p_A Flavodoxin; electron tr 62.2 20 0.00068 25.5 6.1 45 1-45 1-56 (147)
102 3f6r_A Flavodoxin; FMN binding 61.9 25 0.00087 25.0 6.7 45 1-45 2-57 (148)
103 1rvv_A Riboflavin synthase; tr 61.5 19 0.00066 27.0 5.9 75 1-76 13-114 (154)
104 2obx_A DMRL synthase 1, 6,7-di 61.1 14 0.00049 27.8 5.2 74 1-75 12-111 (157)
105 2pjk_A 178AA long hypothetical 60.7 13 0.00043 28.4 4.9 48 1-48 16-92 (178)
106 3pzy_A MOG; ssgcid, seattle st 59.1 13 0.00045 27.9 4.7 48 1-48 8-77 (164)
107 3l49_A ABC sugar (ribose) tran 59.0 52 0.0018 25.7 8.7 67 2-77 7-92 (291)
108 1mkz_A Molybdenum cofactor bio 58.3 11 0.00037 28.6 4.1 48 1-48 11-80 (172)
109 2b99_A Riboflavin synthase; lu 58.1 34 0.0012 25.7 6.8 73 2-75 4-96 (156)
110 1di0_A Lumazine synthase; tran 57.9 15 0.0005 27.8 4.7 73 2-75 12-110 (158)
111 2is8_A Molybdopterin biosynthe 57.7 6.2 0.00021 29.6 2.6 48 1-48 2-73 (164)
112 3l6u_A ABC-type sugar transpor 57.1 67 0.0023 25.0 9.5 67 2-77 10-95 (293)
113 3hn7_A UDP-N-acetylmuramate-L- 56.0 40 0.0014 30.0 8.1 89 1-89 20-145 (524)
114 2raf_A Putative dinucleotide-b 55.4 61 0.0021 24.7 8.2 71 1-80 20-92 (209)
115 2ohh_A Type A flavoprotein FPR 55.3 16 0.00054 30.8 5.1 45 1-45 257-315 (404)
116 2q9u_A A-type flavoprotein; fl 55.1 18 0.00062 30.7 5.5 76 1-79 257-349 (414)
117 3dfu_A Uncharacterized protein 54.3 8.9 0.0003 30.8 3.1 38 1-39 7-45 (232)
118 3m9w_A D-xylose-binding peripl 54.0 70 0.0024 25.4 8.8 67 2-77 4-89 (313)
119 3soz_A ORF 245 protein, cytopl 53.7 17 0.00056 29.5 4.7 64 15-78 38-118 (248)
120 3b6i_A Flavoprotein WRBA; flav 53.3 20 0.00067 26.9 4.9 45 1-45 2-76 (198)
121 1jg7_A BGT, DNA beta-glucosylt 53.0 15 0.0005 29.7 4.1 45 1-45 1-66 (351)
122 2hna_A Protein MIOC, flavodoxi 52.9 19 0.00066 25.8 4.7 45 1-45 2-54 (147)
123 2fn9_A Ribose ABC transporter, 51.7 83 0.0028 24.5 9.6 45 2-46 4-67 (290)
124 2a5l_A Trp repressor binding p 50.9 25 0.00086 26.3 5.2 32 1-32 6-43 (200)
125 3rot_A ABC sugar transporter, 50.8 78 0.0027 24.9 8.5 67 2-77 5-92 (297)
126 3tb6_A Arabinose metabolism tr 50.0 87 0.003 24.3 8.6 71 2-78 17-106 (298)
127 1ejb_A Lumazine synthase; anal 50.0 44 0.0015 25.4 6.3 86 1-87 17-137 (168)
128 2dc1_A L-aspartate dehydrogena 49.5 71 0.0024 24.8 7.9 45 1-46 1-59 (236)
129 2pbq_A Molybdenum cofactor bio 48.9 17 0.00057 27.7 3.8 48 1-48 6-79 (178)
130 3g1w_A Sugar ABC transporter; 48.3 86 0.003 24.6 8.4 67 2-77 6-92 (305)
131 2g2c_A Putative molybdenum cof 47.4 11 0.00036 28.4 2.4 48 1-48 6-80 (167)
132 2pln_A HP1043, response regula 46.8 47 0.0016 22.6 5.8 67 2-79 20-94 (137)
133 1ehs_A STB, heat-stable entero 46.8 3.1 0.00011 23.9 -0.5 14 74-87 32-45 (48)
134 2ark_A Flavodoxin; FMN, struct 46.5 23 0.00079 26.6 4.3 45 1-45 5-60 (188)
135 3uug_A Multiple sugar-binding 45.9 1.1E+02 0.0038 24.3 9.0 67 2-77 5-90 (330)
136 1kwg_A Beta-galactosidase; TIM 44.9 26 0.00089 32.1 5.1 34 14-47 429-462 (645)
137 3rfq_A Pterin-4-alpha-carbinol 44.9 16 0.00055 28.1 3.2 47 2-48 32-100 (185)
138 4b4o_A Epimerase family protei 44.7 30 0.001 27.6 5.0 45 1-45 1-59 (298)
139 3ksm_A ABC-type sugar transpor 43.9 1.1E+02 0.0036 23.5 9.2 67 2-77 2-90 (276)
140 4amg_A Snogd; transferase, pol 42.2 30 0.001 28.6 4.8 31 1-31 23-58 (400)
141 2x0j_A Malate dehydrogenase; o 41.9 80 0.0027 25.9 7.3 15 33-47 65-79 (294)
142 3h75_A Periplasmic sugar-bindi 41.8 1.1E+02 0.0036 24.8 8.1 67 2-78 5-93 (350)
143 2bon_A Lipid kinase; DAG kinas 41.7 55 0.0019 27.1 6.3 78 2-89 31-129 (332)
144 3o74_A Fructose transport syst 40.7 1.2E+02 0.0041 23.2 8.1 66 2-77 4-88 (272)
145 2zki_A 199AA long hypothetical 40.7 30 0.001 25.9 4.2 31 1-31 5-40 (199)
146 1ydg_A Trp repressor binding p 40.1 32 0.0011 26.2 4.3 31 1-31 7-43 (211)
147 3nbm_A PTS system, lactose-spe 40.0 79 0.0027 21.8 6.0 68 1-78 7-85 (108)
148 3edo_A Flavoprotein, putative 39.8 40 0.0014 24.3 4.6 28 2-29 5-36 (151)
149 1rtt_A Conserved hypothetical 39.8 22 0.00075 26.8 3.2 31 1-31 7-44 (193)
150 1jlj_A Gephyrin; globular alph 39.1 24 0.00081 27.1 3.3 48 1-48 15-89 (189)
151 3d4o_A Dipicolinate synthase s 38.9 31 0.0011 28.0 4.3 44 1-44 6-65 (293)
152 2f00_A UDP-N-acetylmuramate--L 38.5 1.2E+02 0.004 26.5 8.2 31 1-31 20-51 (491)
153 3nxk_A Cytoplasmic L-asparagin 38.2 72 0.0025 26.9 6.5 35 37-77 245-280 (334)
154 3fni_A Putative diflavin flavo 37.5 89 0.003 22.7 6.3 73 2-78 6-94 (159)
155 1o7j_A L-asparaginase; atomic 37.3 60 0.0021 27.2 5.8 34 37-76 241-275 (327)
156 8abp_A L-arabinose-binding pro 36.9 1.4E+02 0.0049 23.2 8.0 67 2-77 4-88 (306)
157 1jr2_A Uroporphyrinogen-III sy 36.8 39 0.0013 27.2 4.5 46 1-46 22-85 (286)
158 2wlt_A L-asparaginase; hydrola 36.5 63 0.0021 27.1 5.8 35 37-77 242-277 (332)
159 3nep_X Malate dehydrogenase; h 35.5 1E+02 0.0035 25.5 7.0 16 32-47 64-79 (314)
160 1iow_A DD-ligase, DDLB, D-ALA\ 35.2 75 0.0026 25.2 6.0 43 1-43 3-60 (306)
161 2vk2_A YTFQ, ABC transporter p 35.1 1.6E+02 0.0056 23.1 8.1 67 2-77 4-89 (306)
162 2hqr_A Putative transcriptiona 34.7 38 0.0013 25.5 4.0 70 1-80 1-77 (223)
163 1wsa_A Asparaginase, asparagin 34.4 65 0.0022 27.0 5.6 35 37-77 239-274 (330)
164 3mw8_A Uroporphyrinogen-III sy 34.3 19 0.00065 28.2 2.2 46 1-46 2-59 (240)
165 3gv0_A Transcriptional regulat 33.9 1.7E+02 0.0056 22.8 8.0 52 15-77 32-95 (288)
166 4ici_A Putative flavoprotein; 33.6 47 0.0016 24.7 4.2 30 1-30 14-46 (171)
167 1nns_A L-asparaginase II; amid 33.4 71 0.0024 26.7 5.7 35 37-77 235-270 (326)
168 3cs3_A Sugar-binding transcrip 33.3 1.5E+02 0.0051 22.9 7.4 45 2-46 10-66 (277)
169 3s40_A Diacylglycerol kinase; 32.5 97 0.0033 25.2 6.3 78 2-89 10-108 (304)
170 2rir_A Dipicolinate synthase, 32.4 49 0.0017 26.8 4.5 43 1-43 8-66 (300)
171 1p3d_A UDP-N-acetylmuramate--a 32.3 1.2E+02 0.0043 26.2 7.3 30 1-30 19-49 (475)
172 3hcw_A Maltose operon transcri 31.9 1.4E+02 0.0048 23.4 7.1 33 14-46 33-77 (295)
173 3oti_A CALG3; calicheamicin, T 31.8 52 0.0018 27.3 4.6 31 1-31 21-56 (398)
174 3u3x_A Oxidoreductase; structu 31.1 2.2E+02 0.0077 23.5 8.6 28 2-29 28-56 (361)
175 1oju_A MDH, malate dehydrogena 30.7 1.6E+02 0.0055 24.0 7.4 16 32-47 64-79 (294)
176 2r85_A PURP protein PF1517; AT 30.5 63 0.0021 26.1 4.8 31 1-32 3-33 (334)
177 3n8k_A 3-dehydroquinate dehydr 29.8 20 0.00069 27.3 1.5 37 12-48 55-106 (172)
178 2o2z_A Hypothetical protein; s 29.7 36 0.0012 28.7 3.1 42 36-81 177-220 (323)
179 1di6_A MOGA, molybdenum cofact 29.6 31 0.0011 26.7 2.6 48 1-48 4-77 (195)
180 2d6f_A Glutamyl-tRNA(Gln) amid 29.5 1E+02 0.0035 27.0 6.1 35 37-77 325-360 (435)
181 3oa2_A WBPB; oxidoreductase, s 29.5 2.3E+02 0.0078 23.0 9.0 29 1-29 4-33 (318)
182 3c3d_A 2-phospho-L-lactate tra 29.0 20 0.00067 30.1 1.4 39 35-79 181-221 (311)
183 1uc8_A LYSX, lysine biosynthes 29.0 83 0.0028 24.4 5.2 44 2-45 1-56 (280)
184 1uz5_A MOEA protein, 402AA lon 29.0 35 0.0012 29.5 3.0 36 14-49 211-258 (402)
185 2yq5_A D-isomer specific 2-hyd 28.4 78 0.0027 26.6 5.1 45 1-45 2-53 (343)
186 4fzr_A SSFS6; structural genom 28.1 66 0.0023 26.6 4.6 31 1-31 16-51 (398)
187 3l5o_A Uncharacterized protein 27.9 56 0.0019 26.7 3.9 41 2-46 143-195 (270)
188 3egc_A Putative ribose operon 27.9 2.1E+02 0.0072 22.1 7.7 46 2-47 10-74 (291)
189 3tsa_A SPNG, NDP-rhamnosyltran 27.9 73 0.0025 26.2 4.9 31 1-31 2-37 (391)
190 4pga_A Glutaminase-asparaginas 27.5 72 0.0025 26.9 4.7 36 36-77 244-280 (337)
191 3o1i_D Periplasmic protein TOR 27.2 1.5E+02 0.0051 23.1 6.5 66 2-77 7-93 (304)
192 1g8l_A Molybdopterin biosynthe 27.0 48 0.0016 28.7 3.6 35 14-48 208-254 (411)
193 3sho_A Transcriptional regulat 27.0 1.8E+02 0.0062 21.1 7.5 69 2-79 41-122 (187)
194 3jy6_A Transcriptional regulat 27.0 2E+02 0.007 22.0 7.2 65 2-78 9-92 (276)
195 1gsa_A Glutathione synthetase; 26.7 72 0.0025 25.3 4.5 30 1-30 2-39 (316)
196 2x7x_A Sensor protein; transfe 26.6 2.4E+02 0.0082 22.3 8.7 67 2-77 8-93 (325)
197 2p0y_A Hypothetical protein LP 26.6 24 0.00082 30.0 1.5 41 36-80 187-229 (341)
198 1j6u_A UDP-N-acetylmuramate-al 26.5 1.1E+02 0.0039 26.5 6.0 15 33-47 67-81 (469)
199 2q7x_A UPF0052 protein SP_1565 26.4 26 0.00088 29.6 1.7 40 36-79 183-224 (326)
200 3eod_A Protein HNR; response r 26.2 52 0.0018 22.0 3.1 73 1-79 8-87 (130)
201 1uuy_A CNX1, molybdopterin bio 26.1 71 0.0024 23.6 4.0 48 1-48 6-82 (167)
202 1agx_A Glutaminase-asparaginas 25.8 82 0.0028 26.4 4.7 35 37-77 239-275 (331)
203 3lte_A Response regulator; str 25.8 51 0.0018 22.1 3.0 43 2-44 8-57 (132)
204 1zq1_A Glutamyl-tRNA(Gln) amid 25.5 1E+02 0.0035 27.0 5.4 35 37-77 328-363 (438)
205 2fvy_A D-galactose-binding per 25.5 2.4E+02 0.008 21.9 9.6 68 2-78 4-91 (309)
206 3grc_A Sensor protein, kinase; 25.5 49 0.0017 22.5 2.9 74 2-82 8-91 (140)
207 3r5x_A D-alanine--D-alanine li 25.4 21 0.00072 28.8 0.9 44 1-44 4-62 (307)
208 3gt7_A Sensor protein; structu 25.3 47 0.0016 23.3 2.8 70 2-78 9-88 (154)
209 3i42_A Response regulator rece 24.8 35 0.0012 22.8 1.9 43 2-44 5-54 (127)
210 3f6c_A Positive transcription 24.8 63 0.0022 21.6 3.3 72 1-80 2-83 (134)
211 3npg_A Uncharacterized DUF364 24.5 78 0.0027 25.4 4.2 41 2-46 118-173 (249)
212 2ioy_A Periplasmic sugar-bindi 24.4 2.4E+02 0.0083 21.7 8.6 67 2-77 3-88 (283)
213 3o9z_A Lipopolysaccaride biosy 24.4 2.8E+02 0.0096 22.4 9.6 29 1-29 4-33 (312)
214 1lss_A TRK system potassium up 24.0 86 0.0029 21.3 4.0 30 1-31 5-35 (140)
215 3abi_A Putative uncharacterize 23.9 1.5E+02 0.005 24.6 6.1 27 1-29 17-44 (365)
216 2dri_A D-ribose-binding protei 23.8 2.4E+02 0.0084 21.5 9.0 68 1-77 2-88 (271)
217 2rjo_A Twin-arginine transloca 23.7 2.2E+02 0.0075 22.6 7.0 67 2-77 7-94 (332)
218 3cg0_A Response regulator rece 23.2 1E+02 0.0035 20.6 4.3 69 2-79 11-90 (140)
219 1qkk_A DCTD, C4-dicarboxylate 23.2 60 0.0021 22.6 3.0 71 1-79 4-83 (155)
220 1ag9_A Flavodoxin; electron tr 23.0 17 0.00058 27.1 -0.1 45 1-45 1-53 (175)
221 2ppv_A Uncharacterized protein 23.0 36 0.0012 28.8 1.9 42 36-81 176-219 (332)
222 2p2s_A Putative oxidoreductase 22.9 3E+02 0.01 22.2 9.6 29 1-29 5-34 (336)
223 2fep_A Catabolite control prot 22.8 2.7E+02 0.0091 21.5 7.8 45 2-46 18-81 (289)
224 2vyc_A Biodegradative arginine 22.5 1.5E+02 0.0052 27.6 6.3 77 1-82 1-96 (755)
225 1ccw_A Protein (glutamate muta 22.5 92 0.0031 22.2 3.9 76 2-82 5-94 (137)
226 3euw_A MYO-inositol dehydrogen 22.4 1.6E+02 0.0056 23.9 6.0 26 2-28 6-33 (344)
227 4had_A Probable oxidoreductase 22.2 2.8E+02 0.0097 22.4 7.5 27 2-29 25-54 (350)
228 3kke_A LACI family transcripti 22.2 2.8E+02 0.0096 21.6 7.7 53 14-77 36-100 (303)
229 3k4h_A Putative transcriptiona 22.2 2.7E+02 0.0092 21.3 7.3 53 14-77 34-98 (292)
230 3jtm_A Formate dehydrogenase, 22.2 1.7E+02 0.0058 24.6 6.0 45 1-45 3-70 (351)
231 3snk_A Response regulator CHEY 22.2 72 0.0025 21.5 3.2 72 2-79 16-95 (135)
232 2vzf_A NADH-dependent FMN redu 22.2 34 0.0012 25.8 1.5 30 1-30 3-41 (197)
233 2him_A L-asparaginase 1; hydro 22.0 1.4E+02 0.0046 25.4 5.4 36 37-76 253-289 (358)
234 1uqr_A 3-dehydroquinate dehydr 22.0 2.4E+02 0.0082 20.9 6.1 32 17-48 37-79 (154)
235 3cg4_A Response regulator rece 21.9 59 0.002 22.1 2.7 43 2-44 9-58 (142)
236 2j48_A Two-component sensor ki 21.7 53 0.0018 21.1 2.3 45 1-45 2-53 (119)
237 3dfz_A SIRC, precorrin-2 dehyd 21.6 1.2E+02 0.0042 23.7 4.8 17 15-31 46-62 (223)
238 2pl1_A Transcriptional regulat 21.6 70 0.0024 20.9 3.0 43 1-43 1-50 (121)
239 3m6m_D Sensory/regulatory prot 21.5 50 0.0017 22.9 2.3 43 1-43 15-64 (143)
240 2p10_A MLL9387 protein; putati 21.5 65 0.0022 26.6 3.1 32 59-90 15-46 (286)
241 3q2i_A Dehydrogenase; rossmann 21.2 2.7E+02 0.0093 22.7 7.2 29 1-29 14-44 (354)
242 2qxy_A Response regulator; reg 21.2 50 0.0017 22.5 2.2 71 2-79 6-83 (142)
243 2rdm_A Response regulator rece 21.1 70 0.0024 21.3 2.9 73 2-79 7-87 (132)
244 2rjn_A Response regulator rece 21.0 64 0.0022 22.4 2.8 71 2-80 9-88 (154)
245 2h3h_A Sugar ABC transporter, 21.0 3E+02 0.01 21.5 7.2 67 2-77 3-88 (313)
246 1m3s_A Hypothetical protein YC 20.8 2E+02 0.0068 20.9 5.7 56 15-79 55-114 (186)
247 3ldh_A Lactate dehydrogenase; 20.6 2.2E+02 0.0076 23.7 6.4 17 31-47 83-99 (330)
248 2xhz_A KDSD, YRBH, arabinose 5 20.5 2.3E+02 0.0078 20.5 6.0 69 2-79 51-131 (183)
249 3otg_A CALG1; calicheamicin, T 20.4 1.1E+02 0.0039 25.1 4.6 32 1-32 21-57 (412)
250 2ov6_A V-type ATP synthase sub 20.2 1.1E+02 0.0036 20.9 3.6 27 1-31 1-28 (101)
251 4ew6_A D-galactose-1-dehydroge 20.1 1.1E+02 0.0037 25.1 4.4 27 2-29 27-56 (330)
No 1
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=100.00 E-value=5.3e-36 Score=244.03 Aligned_cols=182 Identities=20% Similarity=0.311 Sum_probs=141.9
Q ss_pred EEEEEecC-CChHHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCc--chHHHHHhhCCHHHHHHHHHHcCCcEEEEe
Q 028010 2 VVGVLALQ-GSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGES--TTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (215)
Q Consensus 2 ~v~il~~~-G~~~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~--~~~~~l~~~~~l~~~i~~~~~~~~PilGIC 78 (215)
||+|+++. ||..|+.++|+++|++++++++++++.++|+||+||+.+ +.+..+.. . .+++...+.++|+||||
T Consensus 4 ~I~iiD~g~~n~~si~~al~~~G~~~~v~~~~~~l~~~D~lilPG~g~~~~~~~~~~~-~---~~i~~~~~~~~PvlGIC 79 (211)
T 4gud_A 4 NVVIIDTGCANISSVKFAIERLGYAVTISRDPQVVLAADKLFLPGVGTASEAMKNLTE-R---DLIELVKRVEKPLLGIC 79 (211)
T ss_dssp CEEEECCCCTTHHHHHHHHHHTTCCEEEECCHHHHHHCSEEEECCCSCHHHHHHHHHH-T---TCHHHHHHCCSCEEEET
T ss_pred EEEEEECCCChHHHHHHHHHHCCCEEEEECCHHHHhCCCEEEECCCCCHHHHHHHHHh-c---ChHHHHHHcCCCEEEEc
Confidence 79999995 478899999999999999999988888999999999532 34444433 2 34555667899999999
Q ss_pred hHHHHHHHhhccCC---CCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC--C
Q 028010 79 AGLIFLANKAVGQK---LGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP--D 153 (215)
Q Consensus 79 ~G~QlLa~~~~~~~---~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~--~ 153 (215)
+|||+|+.++++.. .....++|+++++|.++..+. ...++++|+.+... ..+++++++++ .
T Consensus 80 lG~QlL~~~~g~~~~~~~~~~~gl~~~~~~v~~~~~~~--------~~~~~~~~~~~~~~------~~~~l~~~l~~~~~ 145 (211)
T 4gud_A 80 LGMQLLGKLSEEKGQKADEIVQCLGLVDGEVRLLQTGD--------LPLPHMGWNTVQVK------EGHPLFNGIEPDAY 145 (211)
T ss_dssp HHHHTTSSEECCC----CCCEECCCSSSCEEEECCCTT--------SCSSEEEEECCEEC------TTCGGGTTCCTTCC
T ss_pred hhHhHHHHHhCCcccccCCccccceeccceEEEcccCC--------cceeeccceeeeee------ccChhhcCCCCCcE
Confidence 99999999987642 224578999999999876433 35678899765431 36789999854 5
Q ss_pred eEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCCCc
Q 028010 154 VDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTADTR 210 (215)
Q Consensus 154 ~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~~ 210 (215)
++++|++.+.... .++|+++++ ..++++++++|+||+|||||++.+.|
T Consensus 146 ~~~~H~~~v~~~~----~~~a~~~~g-----~~~~~~v~~~~v~GvQFHPE~s~~~G 193 (211)
T 4gud_A 146 FYFVHSFAMPVGD----YTIAQCEYG-----QPFSAAIQAGNYYGVQFHPERSSKAG 193 (211)
T ss_dssp EEEEESEECCCCT----TEEEEEESS-----SEEEEEEEETTEEEESSCGGGSHHHH
T ss_pred EEEEeeEEeCCCC----eEEEEecCC-----CeEEEEEeCCCEEEEEccCEecCccH
Confidence 7888988764322 688999987 56788899999999999999987654
No 2
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=100.00 E-value=6.9e-33 Score=225.67 Aligned_cols=183 Identities=38% Similarity=0.582 Sum_probs=135.1
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehH
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G 80 (215)
|||+|+++.|++.++.++|+++|+++++++..++++++|+||+|||.+..++.+.++..+.+.|++++++++|+||||+|
T Consensus 21 ~~I~ii~~~~~~~~~~~~l~~~g~~~~~~~~~~~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G 100 (208)
T 2iss_D 21 MKIGVLGVQGDVREHVEALHKLGVETLIVKLPEQLDMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAG 100 (208)
T ss_dssp CEEEEECSSSCHHHHHHHHHHTTCEEEEECSGGGGGGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHH
T ss_pred cEEEEEECCCchHHHHHHHHHCCCEEEEeCChHHHhhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHH
Confidence 69999999999999999999999999999887778899999999997766655555566789999999999999999999
Q ss_pred HHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCCCeEEEEEe
Q 028010 81 LIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVDVLADY 160 (215)
Q Consensus 81 ~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~~~~~~Hs~ 160 (215)
+|+|+.++++. ..+++|++++++.+++.|.+...+.....++.++|++ -.++++|++
T Consensus 101 ~QlL~~~~gg~---~~~~lg~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~--------------------~~~~~~h~~ 157 (208)
T 2iss_D 101 VILLAKRIKNY---SQEKLGVLDITVERNAYGRQVESFETFVEIPAVGKDP--------------------FRAIFIRAP 157 (208)
T ss_dssp HHHHEEEEC------CCCCCCEEEEEETTTTCSGGGCEEEEECCGGGCSSC--------------------EEEEESSCC
T ss_pred HHHHHHHcCCC---CCCCccccceEEEecCCCcccccccCCcccccCCCCc--------------------eEEEEEeCc
Confidence 99999999863 4788999999998765444332221111222223221 124555655
Q ss_pred eCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCCCcccccC
Q 028010 161 PVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTADTRWYIIF 215 (215)
Q Consensus 161 ~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~~~~~~~ 215 (215)
.+...++. ..++|+++ + .+++++.+|++|+|||||++.+.++.++|
T Consensus 158 ~v~~~~~~-~~v~a~~d-~-------~~~a~~~~~i~GvQfHPE~~~~~~l~~~f 203 (208)
T 2iss_D 158 RIVETGKN-VEILATYD-Y-------DPVLVKEGNILACTFHPELTDDLRLHRYF 203 (208)
T ss_dssp EEEEECSS-CEEEEEET-T-------EEEEEEETTEEEESSCGGGSSCCHHHHHH
T ss_pred ccccCCCC-cEEEEEEC-C-------EEEEEEECCEEEEEeCCCcCCcHHHHHHH
Confidence 44332222 26778774 3 67888889999999999999876776654
No 3
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.97 E-value=1.1e-31 Score=216.34 Aligned_cols=180 Identities=40% Similarity=0.651 Sum_probs=133.7
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehH
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G 80 (215)
|||+|+++.+++.++.++|+++|+++++++.+++++++|+||+|||.+..++.+.++..+.++|++++++++|+||||+|
T Consensus 2 m~I~il~~~~~~~~~~~~l~~~g~~~~~~~~~~~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G 81 (196)
T 2nv0_A 2 LTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAG 81 (196)
T ss_dssp CEEEEECSSSCCHHHHHHHHHTTCEEEEECSGGGGGGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHH
T ss_pred cEEEEEEccCCcHHHHHHHHHCCCEEEEeCChHHHhhCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHH
Confidence 69999999999999999999999999999877778899999999998766555555567789999999999999999999
Q ss_pred HHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCCC--eEEEE
Q 028010 81 LIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPD--VDVLA 158 (215)
Q Consensus 81 ~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~~--~~~~H 158 (215)
+|+|+.++++. ..+++|++++++.+++.|.+..++ ..+..+.+++.. ++++|
T Consensus 82 ~q~l~~~~gg~---~~~~lg~~~~~~~~~~~g~~~~~~-----------------------~~~~~~~~~g~~~~~~~~h 135 (196)
T 2nv0_A 82 LIILAKEIAGS---DNPHLGLLNVVVERNSFGRQVDSF-----------------------EADLTIKGLDEPFTGVFIR 135 (196)
T ss_dssp HHHHSBCCC-------CCCCCSCEEEECCCSCTTTSEE-----------------------EEEECCTTCSSCEEEEEES
T ss_pred HHHHHHHhcCC---CCCcccCCceeEeccCCCcccccc-----------------------cCCcccccCCCceEEEEEe
Confidence 99999999863 357899999988765433222111 112223334333 35566
Q ss_pred EeeCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCCCcccccC
Q 028010 159 DYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTADTRWYIIF 215 (215)
Q Consensus 159 s~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~~~~~~~ 215 (215)
++.+...++. ..++|+++. .+++++.+|++|+|||||++.+..+.++|
T Consensus 136 ~~~v~~~~~~-~~v~a~~d~--------~~~a~~~~~~~gvQfHPE~~~~~~l~~~f 183 (196)
T 2nv0_A 136 APHILEAGEN-VEVLSEHNG--------RIVAAKQGQFLGCSFHPELTEDHRVTQLF 183 (196)
T ss_dssp CCEEEEECTT-CEEEEEETT--------EEEEEEETTEEEESSCTTSSSCCHHHHHH
T ss_pred cceecccCCC-cEEEEEECC--------EEEEEEECCEEEEEECCccCCchHHHHHH
Confidence 6654332332 267888742 46788889999999999999887776654
No 4
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.97 E-value=5.8e-32 Score=216.65 Aligned_cols=181 Identities=41% Similarity=0.589 Sum_probs=135.6
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcC-CcEEEEeh
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMG-KPVWGTCA 79 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~-~PilGIC~ 79 (215)
|+|+|+.++|++.++.++|+++|+++++++++++++++|+||+|||++..++.+.++..+.+.|+++++++ +|+||||+
T Consensus 3 p~Igi~~~~~~~~~~~~~l~~~G~~~~~~~~~~~l~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~ 82 (191)
T 2ywd_A 3 GVVGVLALQGDFREHKEALKRLGIEAKEVRKKEHLEGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCA 82 (191)
T ss_dssp CCEEEECSSSCHHHHHHHHHTTTCCCEEECSGGGGTTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETH
T ss_pred cEEEEEecCCchHHHHHHHHHCCCEEEEeCChhhhccCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECH
Confidence 47999999999999999999999999999887788899999999997655566654467889999999999 99999999
Q ss_pred HHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeec-CCCeEEEE
Q 028010 80 GLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDV-GPDVDVLA 158 (215)
Q Consensus 80 G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~-~~~~~~~H 158 (215)
|+|+|+.++++. ...+++|++++++.++++|++..++. .+..+.++ .-.++++|
T Consensus 83 G~Q~l~~~~gg~--~~~~~lg~~~~~~~~~~~g~~~~~~~-----------------------~~~~~~~~~~~~~~~~H 137 (191)
T 2ywd_A 83 GAIWLAKEIVGY--PEQPRLGVLEAWVERNAFGRQVESFE-----------------------EDLEVEGLGSFHGVFIR 137 (191)
T ss_dssp HHHHHEEEETTC--TTCCCCCCEEEEEETTCSCCSSSEEE-----------------------EEEEETTTEEEEEEEES
T ss_pred HHHHHHHHhCCC--CCCccccccceEEEcCCcCCcccccc-----------------------ccccccCCCceeEEEEc
Confidence 999999999852 14678999999987754333221110 11112222 01356788
Q ss_pred EeeCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCCCcccccC
Q 028010 159 DYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTADTRWYIIF 215 (215)
Q Consensus 159 s~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~~~~~~~ 215 (215)
|+.+...++.. .++|+++ + .+++++++|++|+|||||++.+.++.++|
T Consensus 138 s~~v~~l~~~~-~~~a~~~-~-------~~~a~~~~~~~gvQfHPE~~~~~~l~~~f 185 (191)
T 2ywd_A 138 APVFRRLGEGV-EVLARLG-D-------LPVLVRQGKVLASSFHPELTEDPRLHRYF 185 (191)
T ss_dssp CCEEEEECTTC-EEEEEET-T-------EEEEEEETTEEEESSCGGGSSCCHHHHHH
T ss_pred ccceeccCCCc-EEEEEEC-C-------EEEEEEECCEEEEEeCCCCCCCcHHHHHH
Confidence 87664333322 6778884 3 68899999999999999999876665543
No 5
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=5.3e-32 Score=216.42 Aligned_cols=174 Identities=32% Similarity=0.526 Sum_probs=128.7
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehH
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G 80 (215)
|||+||++.|++.++.++|+++|+++++++++++++++|+||+|||+.+.++.+.+..++.+.|+ +.++|+||||+|
T Consensus 1 m~i~vl~~~g~~~~~~~~l~~~G~~~~~~~~~~~~~~~dglil~GG~~~~~~~~~~~~~~~~~i~---~~~~PilGIC~G 77 (186)
T 2ywj_A 1 MIIGVLAIQGDVEEHEEAIKKAGYEAKKVKRVEDLEGIDALIIPGGESTAIGKLMKKYGLLEKIK---NSNLPILGTCAG 77 (186)
T ss_dssp CEEEEECSSSCCHHHHHHHHHTTSEEEEECSGGGGTTCSEEEECCSCHHHHHHHHHHTTHHHHHH---TCCCCEEEETHH
T ss_pred CEEEEEecCcchHHHHHHHHHCCCEEEEECChHHhccCCEEEECCCCchhhhhhhhccCHHHHHH---hcCCcEEEECHH
Confidence 89999999999999999999999999999877778899999999998766655554456677766 689999999999
Q ss_pred HHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeec-CCCeEEEEE
Q 028010 81 LIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDV-GPDVDVLAD 159 (215)
Q Consensus 81 ~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~-~~~~~~~Hs 159 (215)
||+|+.++|+ ..+++|++++++.++..+++..++ ..++++.++ .-.++++|+
T Consensus 78 ~Qll~~~~gg----~~~~lg~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~H~ 130 (186)
T 2ywj_A 78 MVLLSKGTGI----NQILLELMDITVKRNAYGRQVDSF-----------------------EKEIEFKDLGKVYGVFIRA 130 (186)
T ss_dssp HHHHSSCCSS----CCCCCCCSSEEEETTTTCSSSCCE-----------------------EEEEEETTTEEEEEEESSC
T ss_pred HHHHHHHhCC----CcCccCCCceeEEeccCCCcccce-----------------------ecccccccCCcEEEEEEec
Confidence 9999999864 356788888887754322211111 122334444 114566788
Q ss_pred eeCCCC-ccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCC-Ccccc
Q 028010 160 YPVPSN-KVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTAD-TRWYI 213 (215)
Q Consensus 160 ~~~~~~-~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~-~~~~~ 213 (215)
+.+... ++.. .++|+++ + .++++++++++|+|||||++.+ ..+.+
T Consensus 131 ~~v~~l~~~~~-~v~a~sd-~-------~~~a~~~~~~~gvQfHPE~~~~g~~l~~ 177 (186)
T 2ywj_A 131 PVVDKILSDDV-EVIARDG-D-------KIVGVKQGKYMALSFHPELSEDGYKVYK 177 (186)
T ss_dssp CEEEEECCTTC-EEEEEET-T-------EEEEEEETTEEEESSCGGGSTTHHHHHH
T ss_pred ceeeecCCCCe-EEEEEEC-C-------EEEEEeeCCEEEEECCCCcCCchhHHHH
Confidence 776443 3332 6788884 2 5788888999999999999986 34444
No 6
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.97 E-value=3.7e-32 Score=223.93 Aligned_cols=195 Identities=35% Similarity=0.577 Sum_probs=137.3
Q ss_pred CEEEEEecCCChHHHHHHHHHC---CCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhh--CCHHHHHHHHHHc-CCcE
Q 028010 1 MVVGVLALQGSFNEHIAALKRL---GVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEY--HNLFPALREFVKM-GKPV 74 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~---G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~--~~l~~~i~~~~~~-~~Pi 74 (215)
|||+|+++++++.++.++|+++ |++++.++.+++++++|+||||||.++.++.+.++ ..+.+.|++++++ ++|+
T Consensus 4 ~~I~Il~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~l~~~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~Pi 83 (227)
T 2abw_A 4 ITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPI 83 (227)
T ss_dssp EEEEEECTTSCCHHHHHHHHTTCCTTEEEEEECSHHHHHTCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCE
T ss_pred cEEEEEeCCCCcHHHHHHHHHhccCCeEEEEEcCccccccCCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEE
Confidence 5899999999999999999999 99999888776777899999999987666555332 3567899999999 9999
Q ss_pred EEEehHHHHHHHhhccCC-CCC---ccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeec
Q 028010 75 WGTCAGLIFLANKAVGQK-LGG---QELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDV 150 (215)
Q Consensus 75 lGIC~G~QlLa~~~~~~~-~~~---~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~ 150 (215)
||||+|||+|+.++++.. .+. .+++|++++++.++.+|++..++.....++.++ .. .+-
T Consensus 84 lGIC~G~QlL~~~~gg~~~~~~~~~~~~lG~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~---------------~g~ 146 (227)
T 2abw_A 84 WGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDS--SA---------------FKK 146 (227)
T ss_dssp EEETHHHHHTEEEEECCCSCCTTGGGSCCCCEEEEEECCC----CCEEEEECEECCCC--TT---------------CCT
T ss_pred EEECHHHHHHHHHhcCCccccccccccccCceeEEEEecCCCcccccccccccccccc--cc---------------CCC
Confidence 999999999999998642 111 678999999888765544433332211222210 00 000
Q ss_pred CCCeEEEEEeeCCCC-ccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCCCcccccC
Q 028010 151 GPDVDVLADYPVPSN-KVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTADTRWYIIF 215 (215)
Q Consensus 151 ~~~~~~~Hs~~~~~~-~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~~~~~~~ 215 (215)
.-.+++.|++.+... ++. ..++|+++++. ++...+++++++|++|+|||||++.+.++++||
T Consensus 147 ~~~~~~~h~~~v~~~~~~~-~~vla~~~~~~--~g~~~~~a~~~~~v~gvQfHPE~~~~~~l~~~F 209 (227)
T 2abw_A 147 DLTAACIRAPYIREILSDE-VKVLATFSHES--YGPNIIAAVEQNNCLGTVFHPELLPHTAFQQYF 209 (227)
T ss_dssp TCEEEEESCCEEEEECCTT-CEEEEEEEETT--TEEEEEEEEEETTEEEESSCGGGSSCCHHHHHH
T ss_pred ceeEEEEEcceEeecCCCC-cEEEEEccccc--CCCCceEEEEECCEEEEEECCeeCCCcHHHHHH
Confidence 112466677655432 332 26889987510 002467788899999999999999988888876
No 7
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.97 E-value=1.1e-31 Score=217.07 Aligned_cols=178 Identities=19% Similarity=0.219 Sum_probs=135.8
Q ss_pred CEEEEEecC-CChHHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCC-Cc-chHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 1 MVVGVLALQ-GSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGG-ES-TTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 1 m~v~il~~~-G~~~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG-~~-~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
|||+|+++. +++.++.++|+++|+++++++++++++++|+||+||| .. ..+.++.+ ..+.++|+++++.++|+|||
T Consensus 3 ~~I~iid~~~~~~~~~~~~l~~~G~~~~~~~~~~~l~~~d~lil~G~g~~~~~~~~l~~-~~~~~~i~~~~~~~~PilGI 81 (200)
T 1ka9_H 3 MKALLIDYGSGNLRSAAKALEAAGFSVAVAQDPKAHEEADLLVLPGQGHFGQVMRAFQE-SGFVERVRRHLERGLPFLGI 81 (200)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHTTCEEEEESSTTSCSSCSEEEECCCSCHHHHHHTTSS-SCTHHHHHHHHHTTCCEEEC
T ss_pred cEEEEEeCCCccHHHHHHHHHHCCCeEEEecChHHcccCCEEEECCCCcHHHHHHHHHh-cCHHHHHHHHHHcCCeEEEE
Confidence 589999885 5899999999999999999988778889999999994 32 33445432 45789999999999999999
Q ss_pred ehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC-CeEE
Q 028010 78 CAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP-DVDV 156 (215)
Q Consensus 78 C~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~-~~~~ 156 (215)
|+|+|+|+.++.+- |+.+++|++++++.+++. .+.|++||+++.. .+ + |.+++. .+++
T Consensus 82 C~G~Qll~~~~~~~--Gg~~~l~~~~g~v~~~~~----------~~~~~~G~~~v~~-------~~-~-l~~~~~~~~~~ 140 (200)
T 1ka9_H 82 CVGMQVLYEGSEEA--PGVRGLGLVPGEVRRFRA----------GRVPQMGWNALEF-------GG-A-FAPLTGRHFYF 140 (200)
T ss_dssp THHHHTTSSEETTS--TTCCCCCSSSSEEEECCS----------SSSSEEEEEECEE-------CG-G-GGGGTTCEEEE
T ss_pred cHHHHHHHHhcccc--CCcCCccccccEEEECCC----------CCCCceeEEEEEe-------ch-h-hhcCCCCCEEE
Confidence 99999999996421 237889999999987531 1367899987652 13 4 666643 4678
Q ss_pred EEEeeCCCCccccCCcceeeec-ccCCCCCceEEEEeeCCEEEEeeCCccCCCC
Q 028010 157 LADYPVPSNKVLYSSSTVEIQE-ENAMPEKKVIVAVRQGNLLGTAFHPELTADT 209 (215)
Q Consensus 157 ~Hs~~~~~~~~~~~~~la~s~~-~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~ 209 (215)
+||+++ ...+. .+ |++++ + ..+++++.+++++|+|||||++.+.
T Consensus 141 ~Hs~~~-~~~~~--~v-a~s~~~g-----~~~~~~~~~~~i~gvQfHPE~~~~~ 185 (200)
T 1ka9_H 141 ANSYYG-PLTPY--SL-GKGEYEG-----TPFTALLAKENLLAPQFHPEKSGKA 185 (200)
T ss_dssp EESEEC-CCCTT--CC-EEEEETT-----EEEEEEEECSSEEEESSCTTSSHHH
T ss_pred eccccc-CCCCC--cE-EEEEeCC-----eEEEEEEeeCCEEEEecCCCcCccc
Confidence 999988 43222 56 88887 3 2456666777999999999998754
No 8
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.97 E-value=1.9e-31 Score=215.67 Aligned_cols=173 Identities=22% Similarity=0.292 Sum_probs=131.9
Q ss_pred CEEEEEecC-CChHHHHHHHHHCC-----CeEEEECCCCCCCCcCEEEEcCC-C-cchHHHHHhhCCHHHHHHHHHHcCC
Q 028010 1 MVVGVLALQ-GSFNEHIAALKRLG-----VKGVEIRKPDQLQNVSSLIIPGG-E-STTMARLAEYHNLFPALREFVKMGK 72 (215)
Q Consensus 1 m~v~il~~~-G~~~s~~~~l~~~G-----~~v~~~~~~~~l~~~d~lil~GG-~-~~~~~~l~~~~~l~~~i~~~~~~~~ 72 (215)
|||+||+++ |++.++.++|+++| +++++++++++ .++|+|||||| . ...+.++.. ..+.++|++++++++
T Consensus 1 m~I~iid~~~g~~~s~~~~l~~~G~~~~~~~~~~~~~~~~-~~~dglilpG~g~~~~~~~~l~~-~~~~~~i~~~~~~~~ 78 (201)
T 1gpw_B 1 MRIGIISVGPGNIMNLYRGVKRASENFEDVSIELVESPRN-DLYDLLFIPGVGHFGEGMRRLRE-NDLIDFVRKHVEDER 78 (201)
T ss_dssp CEEEEECCSSSCCHHHHHHHHHHSTTBSSCEEEEECSCCS-SCCSEEEECCCSCSHHHHHHHHH-TTCHHHHHHHHHTTC
T ss_pred CEEEEEecCCchHHHHHHHHHHcCCCCCceEEEEECCCcc-cCCCEEEECCCCcHHHHHHHHHh-hCHHHHHHHHHHcCC
Confidence 899999987 68999999999999 99999988777 88999999995 2 234556644 457889999999999
Q ss_pred cEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecC-
Q 028010 73 PVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVG- 151 (215)
Q Consensus 73 PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~- 151 (215)
|+||||+|||+|+.++++. +..++++++++++.+++.+ +.|++||+.+. ...+
T Consensus 79 PilGIC~G~Qll~~~~g~~--G~~~~l~~~~g~v~~~~~~----------~~~~~g~~~l~--------------~~~~~ 132 (201)
T 1gpw_B 79 YVVGVCLGMQLLFEESEEA--PGVKGLSLIEGNVVKLRSR----------RLPHMGWNEVI--------------FKDTF 132 (201)
T ss_dssp EEEEETHHHHTTSSEETTE--EEEECCCSSSEEEEECCCS----------SCSEEEEEEEE--------------ESSSS
T ss_pred eEEEEChhHHHHHHhhccC--CCCCCcceeeeEEEEcCCC----------CCCcccceeeE--------------eccCC
Confidence 9999999999999998642 2367888888988875311 35678885432 1111
Q ss_pred --CCeEEEEEeeCCCCccccCCcceeeec-ccCCCCCceEEEEeeCCEEEEeeCCccCCCC
Q 028010 152 --PDVDVLADYPVPSNKVLYSSSTVEIQE-ENAMPEKKVIVAVRQGNLLGTAFHPELTADT 209 (215)
Q Consensus 152 --~~~~~~Hs~~~~~~~~~~~~~la~s~~-~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~ 209 (215)
..++++|++.+... . ..++|++++ + ..+.++..++|++|+|||||++.+.
T Consensus 133 ~~~~v~~~H~~~v~~~-~--~~vla~s~~~g-----~~~~a~~~~~~i~gvQfHPE~~~~~ 185 (201)
T 1gpw_B 133 PNGYYYFVHTYRAVCE-E--EHVLGTTEYDG-----EIFPSAVRKGRILGFQFHPEKSSKI 185 (201)
T ss_dssp CCEEEEEEESEEEEEC-G--GGEEEEEEETT-----EEEEEEEEETTEEEESSCGGGSHHH
T ss_pred CCCeEEEECcceeccC-C--CEEEEEEccCC-----ceEEEEEECCCEEEEECCCcccCHh
Confidence 24688899887544 2 278999987 2 1355555667999999999999554
No 9
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.97 E-value=6.5e-31 Score=241.98 Aligned_cols=191 Identities=22% Similarity=0.318 Sum_probs=148.0
Q ss_pred CEEEEEecC-CChHHHHHHHHHCCCeEEEECCCCC--CCCcCEEEEcC-CCcc-hHHHHHhhCCHHHHHHHHHHcCCcEE
Q 028010 1 MVVGVLALQ-GSFNEHIAALKRLGVKGVEIRKPDQ--LQNVSSLIIPG-GEST-TMARLAEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 1 m~v~il~~~-G~~~s~~~~l~~~G~~v~~~~~~~~--l~~~d~lil~G-G~~~-~~~~l~~~~~l~~~i~~~~~~~~Pil 75 (215)
|||+|+++. +++.++.++|+++|+++++++.+++ ++++|+||||| |... .+..+.. ..+.++|++++++++|+|
T Consensus 5 ~~I~Iid~~~g~~~~~~~~l~~~G~~~~vv~~~~~~~l~~~DglILpGgG~~~~~~~~l~~-~~~~~~i~~~~~~g~PiL 83 (555)
T 1jvn_A 5 PVVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFN-RGFEKPIREYIESGKPIM 83 (555)
T ss_dssp CEEEEECCSCSCCHHHHHHHHHTTCEEEEESSGGGCCSTTCSCEEEEECSCHHHHHHHHHH-TTCHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHCCCEEEEECCccccccccCCEEEECCCCchHhHhhhhhh-ccHHHHHHHHHHcCCcEE
Confidence 389999995 7889999999999999999987665 78999999999 4432 3444433 466889999999999999
Q ss_pred EEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC--C
Q 028010 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP--D 153 (215)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~--~ 153 (215)
|||+|||+|+.++.+. ++.++||++++++.+++. + ..+.|++||+++.. . +++|+++++ .
T Consensus 84 GIC~G~QlL~~a~~eg--g~~~~Lg~lgg~v~~~~~--~------~~~~~~~G~~~v~~-------~-~~L~~~l~~~~~ 145 (555)
T 1jvn_A 84 GIXVGLQALFAGSVES--PKSTGLNYIDFKLSRFDD--S------EKPVPEIGWNSCIP-------S-ENLFFGLDPYKR 145 (555)
T ss_dssp EEEHHHHTTEEEETTB--TTCCCCCSEEEEEEECCT--T------TSCSSEEEEECCCC-------C-TTCCTTCCTTSC
T ss_pred EEchhhhhhhhhhhcC--CCccccCCCCcEEEECCc--C------CCCCccccceEEEE-------c-CHHHhhCCCCce
Confidence 9999999999998421 357889999999987531 0 13578999998753 2 788988865 5
Q ss_pred eEEEEEeeCCCCcc------ccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCC--Cccccc
Q 028010 154 VDVLADYPVPSNKV------LYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTAD--TRWYII 214 (215)
Q Consensus 154 ~~~~Hs~~~~~~~~------~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~--~~~~~~ 214 (215)
++++|||+....+. ....++|+++++ ...++++++++|+||+|||||++.+ .+++++
T Consensus 146 ~~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~----~D~~i~ai~~~~i~GvQFHPE~s~~~g~~l~~~ 210 (555)
T 1jvn_A 146 YYFVHSFAAILNSEKKKNLENDGWKIAKAKYG----SEEFIAAVNKNNIFATQFHPEKSGKAGLNVIEN 210 (555)
T ss_dssp EEEEESEECBCCHHHHHHHHHTTCEEEEEEET----TEEEEEEEEETTEEEESSBGGGSHHHHHHHHHH
T ss_pred EEEEEEEEEEecccccccCCCCCEEEEEEcCC----CCCeEEEEEeCCEEEEEeCcEecChhHHHHHHH
Confidence 89999998854321 123688999985 1158899999999999999999865 345444
No 10
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.97 E-value=6e-31 Score=215.83 Aligned_cols=180 Identities=39% Similarity=0.617 Sum_probs=132.9
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehH
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G 80 (215)
|||+|+++.|++.++.++|+++|+++++++..++++++|+||||||++..++.+.+...+.++|++++++++|+||||+|
T Consensus 24 ~~I~il~~~~~~~~~~~~l~~~G~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G 103 (219)
T 1q7r_A 24 MKIGVLGLQGAVREHVRAIEACGAEAVIVKKSEQLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAG 103 (219)
T ss_dssp CEEEEESCGGGCHHHHHHHHHTTCEEEEECSGGGGTTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTH
T ss_pred CEEEEEeCCCCcHHHHHHHHHCCCEEEEECCHHHHhhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHH
Confidence 68999999999999999999999999999887778899999999998766555555566789999999999999999999
Q ss_pred HHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCCC--eEEEE
Q 028010 81 LIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPD--VDVLA 158 (215)
Q Consensus 81 ~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~~--~~~~H 158 (215)
+|+|+.++++. ..+++|++++++.+++. |+..... ..+..+.+++.. +++.|
T Consensus 104 ~QlL~~~~gg~---~~~~lg~~~~~~~~~~~----------------g~~~~~~-------~~~~~~~g~g~~~~~~~~h 157 (219)
T 1q7r_A 104 LILLAKRIVGY---DEPHLGLMDITVERNSF----------------GRQRESF-------EAELSIKGVGDGFVGVFIR 157 (219)
T ss_dssp HHHHEEEEESS---CCCCCCCEEEEEECHHH----------------HCCCCCE-------EEEEEETTTEEEEEEEESS
T ss_pred HHHHHHHhCCC---CcCCcCccceEEEecCC----------------Cccccce-------ecCcccCCCCCceEEEEEe
Confidence 99999999863 35789999988876432 2211110 011222333222 34456
Q ss_pred EeeCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCCCcccccC
Q 028010 159 DYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTADTRWYIIF 215 (215)
Q Consensus 159 s~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~~~~~~~ 215 (215)
++.+...++. ..++|+++ + .+++++.++++|+|||||++.+..+.++|
T Consensus 158 ~~~v~~l~~~-~~v~a~sd-g-------~~ea~~~~~i~GvQfHPE~~~~~~l~~~f 205 (219)
T 1q7r_A 158 APHIVEAGDG-VDVLATYN-D-------RIVAARQGQFLGCSFHPELTDDHRLMQYF 205 (219)
T ss_dssp CCEEEEECTT-CEEEEEET-T-------EEEEEEETTEEEESSCGGGSSCCHHHHHH
T ss_pred cceeeccCCC-cEEEEEcC-C-------EEEEEEECCEEEEEECcccCCCHHHHHHH
Confidence 5544332332 26778873 2 57888889999999999999876776665
No 11
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.96 E-value=1.1e-29 Score=212.32 Aligned_cols=170 Identities=15% Similarity=0.105 Sum_probs=121.1
Q ss_pred CEEEEEecCC--ChHHHHHHHHHCCCeEEEECC------CCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCC
Q 028010 1 MVVGVLALQG--SFNEHIAALKRLGVKGVEIRK------PDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGK 72 (215)
Q Consensus 1 m~v~il~~~G--~~~s~~~~l~~~G~~v~~~~~------~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~ 72 (215)
|||.||.... +..++.++|++.|+++++++. +++++++|+|||+||..+..+...+...+.++|+++++.++
T Consensus 4 ~~vliiqh~~~e~~~~i~~~l~~~G~~v~v~~~~~~~~~p~~~~~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~ 83 (250)
T 3m3p_A 4 KPVMIIQFSASEGPGHFGDFLAGEHIPFQVLRMDRSDPLPAEIRDCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRV 83 (250)
T ss_dssp CCEEEEESSSSCCCHHHHHHHHHTTCCEEEEEGGGTCCCCSCGGGSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHCCCeEEEEeccCCCcCcCccccCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCC
Confidence 4788887544 567889999999999988862 34567899999999975432212111235688999899999
Q ss_pred cEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC
Q 028010 73 PVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP 152 (215)
Q Consensus 73 PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~ 152 (215)
|+||||+|+|+|+.++| ++|.++ +.|++||++++.+. .+ ..+|+| ++++
T Consensus 84 PvlGIC~G~Qll~~~lG--------------G~V~~~-------------~~~e~G~~~v~~~~-~~--~~~~l~-g~~~ 132 (250)
T 3m3p_A 84 PVIGHCLGGQLLAKAMG--------------GEVTDS-------------PHAEIGWVRAWPQH-VP--QALEWL-GTWD 132 (250)
T ss_dssp CEEEETHHHHHHHHHTT--------------CCEEEE-------------EEEEEEEEEEEECS-SH--HHHHHH-SCSS
T ss_pred CEEEECHHHHHHHHHhC--------------CEEEeC-------------CCCceeeEEEEEec-CC--CCcccc-cCCC
Confidence 99999999999999987 455553 24688998754311 00 135788 7765
Q ss_pred C--eEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCCC
Q 028010 153 D--VDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTADT 209 (215)
Q Consensus 153 ~--~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~~ 209 (215)
. ++++|++.+..++. +.++|+|++| .++++..++++||+|||||++.+.
T Consensus 133 ~~~v~~~H~~~v~lp~~--~~vlA~s~~~------~~~a~~~~~~~~GvQfHPE~~~~~ 183 (250)
T 3m3p_A 133 ELELFEWHYQTFSIPPG--AVHILRSEHC------ANQAYVLDDLHIGFQCHIEMQAHM 183 (250)
T ss_dssp CEEEEEEEEEEECCCTT--EEEEEEETTE------EEEEEEETTTEEEESSCTTCCHHH
T ss_pred ccEEEEEccceeecCCC--CEEEEEeCCC------CEEEEEECCeeEEEEeCCcCCHHH
Confidence 4 56778777643332 3789999987 344444557999999999998653
No 12
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.96 E-value=3.7e-29 Score=207.38 Aligned_cols=169 Identities=12% Similarity=0.062 Sum_probs=119.1
Q ss_pred CEEEEEecCC--ChHHHHHHHHHCCCeEEEECC------CCCCCCcCEEEEcCCCcch---HHHHHhhCC--HHHHHHHH
Q 028010 1 MVVGVLALQG--SFNEHIAALKRLGVKGVEIRK------PDQLQNVSSLIIPGGESTT---MARLAEYHN--LFPALREF 67 (215)
Q Consensus 1 m~v~il~~~G--~~~s~~~~l~~~G~~v~~~~~------~~~l~~~d~lil~GG~~~~---~~~l~~~~~--l~~~i~~~ 67 (215)
|||.||.... +...+.+++++.|+++++++. +++++++|+|||+||+.+. .....+... +.++|+++
T Consensus 1 m~i~vi~h~~~e~~g~~~~~l~~~g~~~~~~~~~~~~~~p~~~~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (236)
T 3l7n_A 1 MRIHFILHETFEAPGAYLAWAALRGHDVSMTKVYRYEKLPKDIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKA 80 (236)
T ss_dssp CEEEEEECCTTSCCHHHHHHHHHTTCEEEEEEGGGTCCCCSCGGGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCCchHHHHHHHHCCCeEEEEeeeCCCCCCCCccccCEEEECCCCCCcccccccCcccchHHHHHHHHHH
Confidence 8999999755 455788899999999988763 3346789999999997542 222233222 57889999
Q ss_pred HHcCCcEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCcee
Q 028010 68 VKMGKPVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAV 147 (215)
Q Consensus 68 ~~~~~PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~ 147 (215)
++.++|+||||+|||+|+.++|+ ++.+. +.+++||+++..+. .+ .++|+|
T Consensus 81 ~~~~~PvLGIClG~QlL~~~~Gg--------------~v~~~-------------~~~~~G~~~v~~~~-~~--~~~~l~ 130 (236)
T 3l7n_A 81 AKSEKIIVGVCLGAQLMGVAYGA--------------DYLHS-------------PKKEIGNYLISLTE-AG--KMDSYL 130 (236)
T ss_dssp HHTTCEEEEETHHHHHHHHHTTC--------------CCEEE-------------EEEEEEEEEEEECT-TG--GGCGGG
T ss_pred HHcCCCEEEEchHHHHHHHHhCC--------------EEecC-------------CCceeeeEEEEEcc-Cc--ccChHH
Confidence 99999999999999999999873 33332 13567887654311 00 146888
Q ss_pred eecCCCe--EEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCC
Q 028010 148 LDVGPDV--DVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTA 207 (215)
Q Consensus 148 ~~~~~~~--~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~ 207 (215)
.+++..+ +..|++.... ++. ..++|+|++| .+.++..++++||+|||||++.
T Consensus 131 ~~~~~~~~v~~~H~~~~~l-p~~-~~vla~s~~~------~~~a~~~~~~v~gvQfHPE~~~ 184 (236)
T 3l7n_A 131 SDFSDDLLVGHWHGDMPGL-PDK-AQVLAISQGC------PRQIIKFGPKQYAFQCHLEFTP 184 (236)
T ss_dssp TTSCSEEEEEEEEEEECCC-CTT-CEEEEECSSC------SCSEEEEETTEEEESSBSSCCH
T ss_pred hcCCCCcEEEEecCCcccC-CCh-heEEEECCCC------CEEEEEECCCEEEEEeCCCCCH
Confidence 8887654 5556655332 332 3789999887 3455555679999999999983
No 13
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.95 E-value=7.3e-29 Score=199.94 Aligned_cols=165 Identities=16% Similarity=0.168 Sum_probs=113.4
Q ss_pred CE-EEEEecCCChHH-HHHHHHHCCCeEEEECCCC----CCC--CcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCC
Q 028010 1 MV-VGVLALQGSFNE-HIAALKRLGVKGVEIRKPD----QLQ--NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGK 72 (215)
Q Consensus 1 m~-v~il~~~G~~~s-~~~~l~~~G~~v~~~~~~~----~l~--~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~ 72 (215)
|| |+|+++.+++.. +.++|+++|+++++++..+ ++. ++|+||++||..+..+.. ...-..++|++ ++.++
T Consensus 1 m~mi~iid~~~s~~~~~~~~l~~~G~~~~v~~~~~~~~~~~~~~~~dglil~gG~~~~~~~~-~~~~~~~~i~~-~~~~~ 78 (195)
T 1qdl_B 1 MDLTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEKRE-DIGVSLDVIKY-LGKRT 78 (195)
T ss_dssp CCEEEEEECSCSSHHHHHHHHHHTTCEEEEEETTTSCHHHHHHHCCSEEEECCCSSCTTSHH-HHTTHHHHHHH-HTTTS
T ss_pred CCEEEEEECCCchHHHHHHHHHhCCCEEEEEeCCCCCHHHHhhCCCCEEEECCCCCChhhhh-hhhHHHHHHHH-hcCCC
Confidence 77 999999888764 5789999999999887653 343 599999988754332211 11123477776 47899
Q ss_pred cEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeC--ceeeec
Q 028010 73 PVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRA--PAVLDV 150 (215)
Q Consensus 73 PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~--pl~~~~ 150 (215)
|+||||+|||+|+.++|+ ++.+.+ ..++.+|+.+..+ ..+ ++++++
T Consensus 79 PvLGIC~G~QlL~~~~gg--------------~v~~~~------------~~~~g~~~~v~~~------~~~~~~l~~~~ 126 (195)
T 1qdl_B 79 PILGVCLGHQAIGYAFGA--------------KIRRAR------------KVFHGKISNIILV------NNSPLSLYYGI 126 (195)
T ss_dssp CEEEETHHHHHHHHHTTC--------------EEEEEE------------EEEEEEEEEEEEC------CSSCCSTTTTC
T ss_pred cEEEEehHHHHHHHHhCC--------------EEeccC------------CCcCCCceEEEEC------CCCHhHHHhcC
Confidence 999999999999999873 343321 1223445433211 133 788777
Q ss_pred CC--CeEEEEEeeCCCCccccCCcceee-ecccCCCCCceEEEEee-C-CEEEEeeCCccCC
Q 028010 151 GP--DVDVLADYPVPSNKVLYSSSTVEI-QEENAMPEKKVIVAVRQ-G-NLLGTAFHPELTA 207 (215)
Q Consensus 151 ~~--~~~~~Hs~~~~~~~~~~~~~la~s-~~~~~~~~~~~~~~~~~-~-~v~g~QFHPE~s~ 207 (215)
+. .++++|++.+...++.. .++|++ +++ .+++++. + |++|+|||||++.
T Consensus 127 ~~~~~v~~~H~~~v~~l~~~~-~vla~s~~~g-------~i~a~~~~~~~~~gvQfHPE~~~ 180 (195)
T 1qdl_B 127 AKEFKATRYHSLVVDEVHRPL-IVDAISAEDN-------EIMAIHHEEYPIYGVQFHPESVG 180 (195)
T ss_dssp CSEEEEEEEEEEEEECCCTTE-EEEEEESSSC-------CEEEEEESSSSEEEESSBTTSTT
T ss_pred CCceEEeccccchhhhCCCCc-EEEEEECCCC-------cEEEEEeCCCCEEEEecCCCCCC
Confidence 65 46778998875444332 689999 776 4566654 3 8999999999987
No 14
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.95 E-value=2e-28 Score=200.09 Aligned_cols=162 Identities=15% Similarity=0.193 Sum_probs=114.7
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECC---CCCCCCcCEEEEcCC-CcchHHHHHhhCCHHHHHHHHHHcCCcEE
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRK---PDQLQNVSSLIIPGG-ESTTMARLAEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~---~~~l~~~d~lil~GG-~~~~~~~l~~~~~l~~~i~~~~~~~~Pil 75 (215)
|||.++++.+.|. ++.++|+++|+++++++. ++++.++|+|||||| +.+.++.+.. ..+. +...+.++|+|
T Consensus 14 ~~i~~id~~~~~~~~~~~~l~~~G~~~~vv~~~~~~~~l~~~DglIl~GG~p~~~~~~~~~-~~l~---~~~~~~~~PiL 89 (212)
T 2a9v_A 14 LKIYVVDNGGQWTHREWRVLRELGVDTKIVPNDIDSSELDGLDGLVLSGGAPNIDEELDKL-GSVG---KYIDDHNYPIL 89 (212)
T ss_dssp CBEEEEEESCCTTCHHHHHHHHTTCBCCEEETTSCGGGGTTCSEEEEEEECSCGGGTGGGH-HHHH---HHHHHCCSCEE
T ss_pred ceEEEEeCCCccHHHHHHHHHHCCCEEEEEeCCCCHHHHhCCCEEEECCCCCCCCcccccc-hhHH---HHHHhCCCCEE
Confidence 5999999988776 688999999999888765 455677999999999 6655443211 1122 33346899999
Q ss_pred EEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCCC--
Q 028010 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPD-- 153 (215)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~~-- 153 (215)
|||+|+|+|+.++| +++.+. +.+++||+.+..+ ..++++++++..
T Consensus 90 GIC~G~Qll~~~lG--------------g~v~~~-------------~~~~~G~~~v~~~------~~~~l~~~~~~~~~ 136 (212)
T 2a9v_A 90 GICVGAQFIALHFG--------------ASVVKA-------------KHPEFGKTKVSVM------HSENIFGGLPSEIT 136 (212)
T ss_dssp EETHHHHHHHHHTT--------------CEEEEE-------------EEEEEEEEEEEES------CCCGGGTTCCSEEE
T ss_pred EEChHHHHHHHHhC--------------CEEEcC-------------CCcccCceeeEEC------CCChhHhcCCCceE
Confidence 99999999999986 344432 1246788655421 256788887653
Q ss_pred eEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEe--eCCEEEEeeCCccCC
Q 028010 154 VDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVR--QGNLLGTAFHPELTA 207 (215)
Q Consensus 154 ~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~--~~~v~g~QFHPE~s~ 207 (215)
+++.|++.+...++.. .++|+++++ .+++++ .++++|+|||||++.
T Consensus 137 v~~~H~~~v~~l~~~~-~vlA~s~d~-------~i~ai~~~~~~i~gvQfHPE~~~ 184 (212)
T 2a9v_A 137 VWENHNDEIINLPDDF-TLAASSATC-------QVQGFYHKTRPIYATQFHPEVEH 184 (212)
T ss_dssp EEEEEEEEEESCCTTE-EEEEECSSC-------SCSEEEESSSSEEEESSCTTSTT
T ss_pred EEeEhhhhHhhCCCCc-EEEEEeCCC-------CEEEEEECCCCEEEEEeCCCCCC
Confidence 5677777764444332 688999876 344544 358999999999986
No 15
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.95 E-value=1.1e-27 Score=194.69 Aligned_cols=174 Identities=21% Similarity=0.240 Sum_probs=124.6
Q ss_pred CEEEEEecCCCh--HHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcchHH----HHHhhCCHHHHHHHHHHcCCcE
Q 028010 1 MVVGVLALQGSF--NEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMA----RLAEYHNLFPALREFVKMGKPV 74 (215)
Q Consensus 1 m~v~il~~~G~~--~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~~~~----~l~~~~~l~~~i~~~~~~~~Pi 74 (215)
|||+||.+++.. .++.++|+++|++++++...+++.++|+||+|||.+.... .+.+...+.++|++++++++|+
T Consensus 3 ~~i~il~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pi 82 (213)
T 3d54_D 3 PRACVVVYPGSNCDRDAYHALEINGFEPSYVGLDDKLDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLI 82 (213)
T ss_dssp CEEEEECCTTEEEHHHHHHHHHTTTCEEEEECTTCCCSSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEE
T ss_pred cEEEEEEcCCCCccHHHHHHHHHCCCEEEEEecCCCcccCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEE
Confidence 499999998864 5789999999999999987677889999999998542211 1222356789999999999999
Q ss_pred EEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC--
Q 028010 75 WGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP-- 152 (215)
Q Consensus 75 lGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~-- 152 (215)
||||+|+|+|+.+ |++++++.+++.+ +. ++||+.++... ..+++++++++
T Consensus 83 lgIC~G~qlLa~a------------Gll~g~v~~~~~~----------~~-~~g~~~v~~~~-----~~~~l~~~~~~~~ 134 (213)
T 3d54_D 83 MGICNGFQILIEM------------GLLKGALLQNSSG----------KF-ICKWVDLIVEN-----NDTPFTNAFEKGE 134 (213)
T ss_dssp EECHHHHHHHHHH------------TSSCSEEECCSSS----------SC-BCCEEEEEECC-----CSSTTSTTSCTTC
T ss_pred EEECHHHHHHHHc------------CCCCCCeecCCCC----------ce-EeeeEEEEeCC-----CCCceeeccCCCC
Confidence 9999999999997 3444677765311 11 67887654310 25688888864
Q ss_pred CeEE--EE---EeeCCCCccccCCcceeeecccCCCCC-ceEEEE-e-eCCEEEEeeCCccCCC
Q 028010 153 DVDV--LA---DYPVPSNKVLYSSSTVEIQEENAMPEK-KVIVAV-R-QGNLLGTAFHPELTAD 208 (215)
Q Consensus 153 ~~~~--~H---s~~~~~~~~~~~~~la~s~~~~~~~~~-~~~~~~-~-~~~v~g~QFHPE~s~~ 208 (215)
.+++ +| +|...+ +. ..++|++++. ++. ..++++ . ++++||+|||||++.+
T Consensus 135 ~~~~~~~H~~~s~~~~~-~~--~~~~a~~~~~---ng~~~~i~a~~~~~~~~~gvQfHPE~~~~ 192 (213)
T 3d54_D 135 KIRIPIAHGFGRYVKID-DV--NVVLRYVKDV---NGSDERIAGVLNESGNVFGLMPHPERAVE 192 (213)
T ss_dssp EEEEECCBSSCEEECSS-CC--EEEEEESSCS---SCCGGGEEEEECSSSCEEEECSCSTTTTS
T ss_pred EEEEEeecCceEEEecC-CC--cEEEEEcCCC---CCCccceeEEEcCCCCEEEEeCCHHHhcC
Confidence 5777 78 887643 22 2677888762 010 134444 3 5799999999999873
No 16
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.95 E-value=4.7e-28 Score=194.04 Aligned_cols=161 Identities=18% Similarity=0.204 Sum_probs=114.9
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCC---CC--CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcE
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPD---QL--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPV 74 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~---~l--~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pi 74 (215)
|.|+|+++.+.+. ++.++|+++|+++++++..+ ++ .++|+||+|||. +. .. ...+.++|+++.+.++|+
T Consensus 1 mmi~iid~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~dglil~Gg~-~~-~~---~~~~~~~i~~~~~~~~Pi 75 (189)
T 1wl8_A 1 MMIVIMDNGGQYVHRIWRTLRYLGVETKIIPNTTPLEEIKAMNPKGIIFSGGP-SL-EN---TGNCEKVLEHYDEFNVPI 75 (189)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHTTCEEEEEETTCCHHHHHHTCCSEEEECCCS-CT-TC---CTTHHHHHHTGGGTCSCE
T ss_pred CeEEEEECCCchHHHHHHHHHHCCCeEEEEECCCChHHhcccCCCEEEECCCC-Ch-hh---hhhHHHHHHHHhhCCCeE
Confidence 6799999987654 67899999999999887654 33 259999999997 32 11 123467888776889999
Q ss_pred EEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCCCe
Q 028010 75 WGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDV 154 (215)
Q Consensus 75 lGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~~~ 154 (215)
||||+|+|+|+.++| +++.+. +.+++||+.+... ..+++|.++++.+
T Consensus 76 lGIC~G~Q~l~~~~g--------------g~v~~~-------------~~~~~G~~~~~~~------~~~~l~~~~~~~~ 122 (189)
T 1wl8_A 76 LGICLGHQLIAKFFG--------------GKVGRG-------------EKAEYSLVEIEII------DEXEIFKGLPKRL 122 (189)
T ss_dssp EEETHHHHHHHHHHT--------------CEEEEC-------------SCCSCEEEEEEES------CC--CCTTSCSEE
T ss_pred EEEcHHHHHHHHHhC--------------CceecC-------------CCcccCceeEEEe------cCchHHhCCCCce
Confidence 999999999999997 344442 2346788644321 2567888777777
Q ss_pred EEEEEeeCCC--CccccCCcceeeecccCCCCCceEEEEe-eCC-EEEEeeCCccCC
Q 028010 155 DVLADYPVPS--NKVLYSSSTVEIQEENAMPEKKVIVAVR-QGN-LLGTAFHPELTA 207 (215)
Q Consensus 155 ~~~Hs~~~~~--~~~~~~~~la~s~~~~~~~~~~~~~~~~-~~~-v~g~QFHPE~s~ 207 (215)
.+.|+|.+.. .++. ..++|+++++ .+++++ +++ ++|+|||||++.
T Consensus 123 ~~~~~h~~~v~~l~~~-~~vla~s~~g-------~i~a~~~~~~~~~gvQfHPE~~~ 171 (189)
T 1wl8_A 123 KVWESHMDEVKELPPK-FKILARSETC-------PIEAMKHEELPIYGVQFHPEVAH 171 (189)
T ss_dssp EEEECCSEEEEECCTT-EEEEEEESSC-------SCSEEEESSSCEEEESSCTTSTT
T ss_pred EEEEEeeeehhhCCCC-cEEEEEcCCC-------CEEEEEeCCceEEEEecCCCcCC
Confidence 8888886532 2332 2688999876 344444 444 999999999976
No 17
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.94 E-value=2.3e-27 Score=197.12 Aligned_cols=163 Identities=15% Similarity=0.066 Sum_probs=116.2
Q ss_pred EEEEEec--CCChHHHHHHHHHCCCeEEEECC------CCCCCCcCEEEEcCCCcch-----HHHHHhhCCHHHHHHHHH
Q 028010 2 VVGVLAL--QGSFNEHIAALKRLGVKGVEIRK------PDQLQNVSSLIIPGGESTT-----MARLAEYHNLFPALREFV 68 (215)
Q Consensus 2 ~v~il~~--~G~~~s~~~~l~~~G~~v~~~~~------~~~l~~~d~lil~GG~~~~-----~~~l~~~~~l~~~i~~~~ 68 (215)
||.||.. ..+..++.++|+..|++++++.. ++++.++|+||+|||+.+. ++++. .+.++|++++
T Consensus 14 ~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~---~~~~~i~~~~ 90 (239)
T 1o1y_A 14 RVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLK---YEFQLIEEIL 90 (239)
T ss_dssp EEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHH---HHHHHHHHHH
T ss_pred EEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHH---HHHHHHHHHH
Confidence 5666665 23566889999999999986642 2345679999999986433 33332 3578899998
Q ss_pred HcCCcEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceee
Q 028010 69 KMGKPVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVL 148 (215)
Q Consensus 69 ~~~~PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~ 148 (215)
+.++|+||||+|||+|+.++| +++.+++. -+++||+.+... ..+++++
T Consensus 91 ~~~~PiLGIC~G~QlL~~alG--------------G~v~~~~~------------g~~~G~~~v~~~------~~~~l~~ 138 (239)
T 1o1y_A 91 KKEIPFLGICLGSQMLAKVLG--------------ASVYRGKN------------GEEIGWYFVEKV------SDNKFFR 138 (239)
T ss_dssp HHTCCEEEETHHHHHHHHHTT--------------CCEEECTT------------CCEEEEEEEEEC------CCCGGGT
T ss_pred HCCCCEEEEchhHHHHHHHcC--------------CeEecCCC------------CCccccEEEEEC------CCCchHH
Confidence 899999999999999999986 34544321 156788655421 3568888
Q ss_pred ecCCC--eEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCC
Q 028010 149 DVGPD--VDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTAD 208 (215)
Q Consensus 149 ~~~~~--~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~ 208 (215)
++++. ++++|++.+..++. ..++|+++++ .+++++.++++|+|||||++.+
T Consensus 139 ~~~~~~~~~~~H~~~v~lp~~--~~vlA~s~~~-------~iea~~~~~i~gvQfHPE~~~~ 191 (239)
T 1o1y_A 139 EFPDRLRVFQWHGDTFDLPRR--ATRVFTSEKY-------ENQGFVYGKAVGLQFHIEVGAR 191 (239)
T ss_dssp TSCSEEEEEEEESEEECCCTT--CEEEEECSSC-------SCSEEEETTEEEESSBSSCCHH
T ss_pred hCCCCceeEeecCCccccCCC--CEEEEEcCCC-------CEEEEEECCEEEEEeCccCCHH
Confidence 88654 56667776643332 2788999876 3557777779999999999864
No 18
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.93 E-value=3.1e-27 Score=193.80 Aligned_cols=159 Identities=19% Similarity=0.238 Sum_probs=109.1
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCC---CC--CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEE
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPD---QL--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~---~l--~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pil 75 (215)
||+||++.+.+. ++.++|+++|++++++.... ++ .++|+||+|||+.+.+... . ..+ .+...+.++|+|
T Consensus 26 ~I~iiD~g~~~~~~i~~~l~~~G~~~~vv~~~~~~~~l~~~~~dglil~Gg~~~~~~~~-~-~~~---~~~~~~~~~Pil 100 (218)
T 2vpi_A 26 AVVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGPNSVYAED-A-PWF---DPAIFTIGKPVL 100 (218)
T ss_dssp CEEEEECSTTTTHHHHHHHHHTTCCEEEECTTCCHHHHHHHTCSEEEEEC----------C-CCC---CGGGGTSSCCEE
T ss_pred eEEEEECCCchHHHHHHHHHHCCCEEEEEECCCChHHHhhcCCCEEEECCCCccccccc-c-hhH---HHHHHHcCCCEE
Confidence 799999987654 68899999999998887533 23 3599999999976543211 1 111 223346799999
Q ss_pred EEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC--C
Q 028010 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP--D 153 (215)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~--~ 153 (215)
|||+|+|+|+.++|+ ++.+++ .+++||+.+..+ ..++++++++. .
T Consensus 101 GIC~G~Qll~~~~GG--------------~v~~~~-------------~~~~G~~~v~~~------~~~~l~~~l~~~~~ 147 (218)
T 2vpi_A 101 GICYGMQMMNKVFGG--------------TVHKKS-------------VREDGVFNISVD------NTCSLFRGLQKEEV 147 (218)
T ss_dssp EETHHHHHHHHHTTC--------------CEEEEE-------------ECSCEEEEEEEC------TTSGGGTTCCSEEE
T ss_pred EEcHHHHHHHHHhCC--------------ceEeCC-------------CCcccEEEEEEc------cCChhHhcCCCCcE
Confidence 999999999999862 344421 246788765421 25688888865 4
Q ss_pred eEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEe--eCCEEEEeeCCccCC
Q 028010 154 VDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVR--QGNLLGTAFHPELTA 207 (215)
Q Consensus 154 ~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~--~~~v~g~QFHPE~s~ 207 (215)
++++|++.+...++.. .++|+++ .++++++ +++++|+|||||++.
T Consensus 148 v~~~H~~~v~~l~~~~-~vlA~s~--------~~i~ai~~~~~~i~gvQfHPE~~~ 194 (218)
T 2vpi_A 148 VLLTHGDSVDKVADGF-KVVARSG--------NIVAGIANESKKLYGAQFHPEVGL 194 (218)
T ss_dssp EEECSEEEESSCCTTC-EEEEEET--------TEEEEEEETTTTEEEESSCTTSTT
T ss_pred EeehhhhHhhhcCCCC-EEEEEcC--------CeEEEEEECCCCEEEEEcCCCCCC
Confidence 6778888876544432 6788883 2678877 679999999999986
No 19
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.93 E-value=2.5e-26 Score=184.58 Aligned_cols=159 Identities=17% Similarity=0.148 Sum_probs=101.5
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCCC---------CcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHc
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQLQ---------NVSSLIIPGGESTTMARLAEYHNLFPALREFVKM 70 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l~---------~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~ 70 (215)
+||+|+++.+++. ++.++|+++|+++++++...+++ +.|++|++||..+..+ .++...+.+.++.
T Consensus 1 ~~i~iiDn~~s~~~~i~~~l~~~G~~~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~~~~-----~~~~~~l~~~~~~ 75 (192)
T 1i1q_B 1 ADILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSE-----AGCMPELLTRLRG 75 (192)
T ss_dssp CEEEEEECSCSSHHHHHHHHHHTTCEEEEEETTSCSHHHHHHHTTCSSEEEEECCCSSCGGG-----STTHHHHHHHHBT
T ss_pred CcEEEEECCccHHHHHHHHHHHCCCeEEEEECCCCHHHHHHHhhhccCCeEEECCCCcCchh-----CchHHHHHHHHhc
Confidence 5899999988876 46899999999999987653221 2446888887655332 1223334445678
Q ss_pred CCcEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeec
Q 028010 71 GKPVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDV 150 (215)
Q Consensus 71 ~~PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~ 150 (215)
++|+||||+|||+|+.++|+. +.+.+ .+..|+.... . ...+++|+++
T Consensus 76 ~~PilGIC~G~Qll~~~~Gg~--------------v~~~~-------------~~~~g~~~~~----~--~~~~~l~~~~ 122 (192)
T 1i1q_B 76 KLPIIGICLGHQAIVEAYGGY--------------VGQAG-------------EILHGKATSI----E--HDGQAMFAGL 122 (192)
T ss_dssp TBCEEEETHHHHHHHHHTSCC--------------CCC----------------CCSSEEEEE----E--ECCCGGGTTS
T ss_pred CCCEEEECcChHHHHHHhCCE--------------EEeCC-------------CcEecceeEE----e--cCCChHHhcC
Confidence 999999999999999999742 11100 0112221100 0 0245777777
Q ss_pred CCC--eEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEe--eCCEEEEeeCCccC
Q 028010 151 GPD--VDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVR--QGNLLGTAFHPELT 206 (215)
Q Consensus 151 ~~~--~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~--~~~v~g~QFHPE~s 206 (215)
++. ++++|++.+...++.. .++|+++ ..+++++ ++|+||+|||||++
T Consensus 123 ~~~~~v~~~H~~~v~~lp~~~-~v~a~~~--------~~~~ai~~~~~~~~gvQfHPE~~ 173 (192)
T 1i1q_B 123 ANPLPVARYHSLVGSNVPAGL-TINAHFN--------GMVMAVRHDADRVCGFQFHPESI 173 (192)
T ss_dssp CSSEEEEECCC---CCCCTTC-EEEEEET--------TEEEEEEETTTTEEEESSBTTST
T ss_pred CCCcEEEechhhHhhhCCCcc-EEEECCC--------CcEEEEEECCCCEEEEEccCccc
Confidence 554 6777888775544432 6777543 3567776 67999999999998
No 20
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.93 E-value=9.3e-26 Score=207.59 Aligned_cols=190 Identities=16% Similarity=0.183 Sum_probs=122.9
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCC---CCCC--CcCEEEEcCCCcchHHHHHhhCCH-HHHHHHHHHcCCc
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKP---DQLQ--NVSSLIIPGGESTTMARLAEYHNL-FPALREFVKMGKP 73 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~---~~l~--~~d~lil~GG~~~~~~~l~~~~~l-~~~i~~~~~~~~P 73 (215)
+||+||+|...|. ++.++|+++|+.++++... +++. ++|+||+|||+.+.+..-. ..+ ...++.+.+.++|
T Consensus 8 ~~IlilD~Gs~~~~~I~r~lre~Gv~~eiv~~~~~~~~i~~~~~dgIIlsGGp~s~~~~~~--~~~~~~l~~~a~~~g~P 85 (556)
T 3uow_A 8 DKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGS--PHLKKEVFEYFLEKKIP 85 (556)
T ss_dssp CEEEEEESSCTTHHHHHHHHHHTTCCEEEEETTCCGGGTTTSCEEEEEECCCSCCTTSTTC--CCCCHHHHHHHHHTTCC
T ss_pred CEEEEEECCCccHHHHHHHHHHCCCeEEEEECCCCHHHHhhcCCCEEEECCCCCcccccCC--cchhHHHHHHhhhcCCC
Confidence 3899999987666 7889999999998887632 3443 6899999999865432211 112 2344555667999
Q ss_pred EEEEehHHHHHHHhhccCCC-CCccccceeeeEEEeccC---CCcceeeeeecccCcccC--CCCCCcceeeeeeeCcee
Q 028010 74 VWGTCAGLIFLANKAVGQKL-GGQELVGGLDCTVHRNFF---GSQIQSFEAELSVPALAS--QEGGPETFRGVFIRAPAV 147 (215)
Q Consensus 74 ilGIC~G~QlLa~~~~~~~~-~~~~~lG~~~~~v~~~~~---~~~~~~~~~~~~~p~~Gw--~~~~~~~~~~~~~~~pl~ 147 (215)
+||||+|||+|+.++|+... ......|..+..+..... ..-+..|+. ..|+||| |.+.. . ..+++|
T Consensus 86 vLGIC~G~QlLa~~lGG~V~~~~~~E~G~~~l~~~~~~~~~~~p~v~~~~~--~~~~mg~~~n~~~~---~---~~~~Lf 157 (556)
T 3uow_A 86 IFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCRNFGD--SSSAMDLYSNYKLM---N---ETCCLF 157 (556)
T ss_dssp EEEETHHHHHHHHHTTCEEEEEEEEEEEEEEEEECCTTGGGGCSGGGGC-----CCHHHHHTTSCCC---C-----CGGG
T ss_pred EEEECHHHHHHHHHhCCcEecCCCcccCCcceeeccCcccccccceecccc--cccccccccccccc---c---ccchhh
Confidence 99999999999999875311 011223443333332110 000111211 1268899 44432 1 367899
Q ss_pred eec-CC--CeEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEee--CCEEEEeeCCccCCC
Q 028010 148 LDV-GP--DVDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQ--GNLLGTAFHPELTAD 208 (215)
Q Consensus 148 ~~~-~~--~~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~--~~v~g~QFHPE~s~~ 208 (215)
+++ +. .+++.|++.+...|+.. .++|+|+++ .+++++. +|+||+|||||++++
T Consensus 158 ~gl~~~~~~v~~~H~d~V~~lp~g~-~vlA~s~~~-------~i~ai~~~~~~i~GvQFHPE~~~~ 215 (556)
T 3uow_A 158 ENIKSDITTVWMNHNDEVTKIPENF-YLVSSSENC-------LICSIYNKEYNIYGVQYHPEVYES 215 (556)
T ss_dssp TTCCSSEEEEEEEEEEEEEECCTTC-EEEEEETTE-------EEEEEEETTTTEEEESSCTTSTTS
T ss_pred cccccCceEEEEEccceeeccCCCc-EEEEEeCCC-------CEEEEEECCCCEEEEEcCCCCCcc
Confidence 998 55 46778888775555433 689999886 4566654 699999999999986
No 21
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.92 E-value=4.4e-26 Score=208.73 Aligned_cols=161 Identities=19% Similarity=0.250 Sum_probs=110.7
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEEC---CCCCCCC--cCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEE
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIR---KPDQLQN--VSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~---~~~~l~~--~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pil 75 (215)
||+||+|...|. ++.++|+++|+.++++. ..+++.+ +|+||+|||+.+.++.- .....+...+.++|+|
T Consensus 12 ~I~IlD~g~~~~~~i~r~lr~~Gv~~~i~p~~~~~~~i~~~~~dgIILsGGp~sv~~~~-----~~~~~~~~~~~~~PvL 86 (527)
T 3tqi_A 12 RILILDFGSQYAQLIARRVREIGVYCELMPCDIDEETIRDFNPHGIILSGGPETVTLSH-----TLRAPAFIFEIGCPVL 86 (527)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTCEEEEEETTCCSSSSTTTCCSEEEECCCCC--------------CCCSTTTSSSCEE
T ss_pred eEEEEECCCccHHHHHHHHHHCCCeEEEEECCCCHHHHHhcCCCEEEECCcCcccccCC-----ChhhHHHHHhcCCCEE
Confidence 899999988776 67899999999988874 3345554 49999999987654321 1122344556899999
Q ss_pred EEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC---
Q 028010 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP--- 152 (215)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~--- 152 (215)
|||+|||+|+.++|+ +|.+. +.+++||+.+... ..+++|++++.
T Consensus 87 GIC~G~Qlla~~lGG--------------~V~~~-------------~~~e~G~~~v~~~------~~~~l~~~l~~~~~ 133 (527)
T 3tqi_A 87 GICYGMQTMAYQLGG--------------KVNRT-------------AKAEFGHAQLRVL------NPAFLFDGIEDQVS 133 (527)
T ss_dssp EETHHHHHHHHHSSS--------------CBC------------------CEEEEEEEES------SCTTTTSSCCSBCC
T ss_pred EEChHHHHHHHHcCC--------------eEEeC-------------CCccccceEEEEc------CCChhhcCCccccc
Confidence 999999999999873 33322 1346787654421 24678888865
Q ss_pred -------CeEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEe--eCCEEEEeeCCccCCC
Q 028010 153 -------DVDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVR--QGNLLGTAFHPELTAD 208 (215)
Q Consensus 153 -------~~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~--~~~v~g~QFHPE~s~~ 208 (215)
.+++.|++.+...|+.. .++|+|+.+ .+++++ .+++||+|||||+++.
T Consensus 134 ~~~~~~~~v~~~H~d~v~~lp~g~-~v~A~s~~~-------~i~ai~~~~~~~~GvQFHPE~~~t 190 (527)
T 3tqi_A 134 PQGEPLLDVWMSHGDIVSELPPGF-EATACTDNS-------PLAAMADFKRRFFGLQFHPEVTHT 190 (527)
T ss_dssp TTSCCEEEEEEESSSCBCSCCTTC-EEEEEETTE-------EEEEEECSSSCEEEESBCSSSTTS
T ss_pred cccccceEEEEEcccchhccCCCC-EEEEEeCCC-------cEEEEEcCCCCEEEEEeccccccc
Confidence 35667777766555543 788999865 566665 4689999999999875
No 22
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.91 E-value=4.7e-26 Score=208.45 Aligned_cols=162 Identities=18% Similarity=0.210 Sum_probs=114.4
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCC---CCCC--CcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcE
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKP---DQLQ--NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPV 74 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~---~~l~--~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pi 74 (215)
+||+||+|.+.|. ++.++|+++|+.++++... +++. ++|+||||||+.+.++... ..+. +...+.++|+
T Consensus 8 ~~IlIlD~g~~~~~~i~r~lr~~G~~~~i~p~~~~~~~i~~~~~dgiILsGGp~s~~~~~~--~~~~---~~~~~~g~Pv 82 (525)
T 1gpm_A 8 HRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENS--PRAP---QYVFEAGVPV 82 (525)
T ss_dssp SEEEEEECSCTTHHHHHHHHHHTTCEEEEEESCCCHHHHHHHCCSEEEECCCSSCTTSTTC--CCCC---GGGGTSSSCE
T ss_pred CEEEEEECCCccHHHHHHHHHHCCCEEEEEECCCCHHHHhccCCCEEEECCcCccccccCC--cchH---HHHHHCCCCE
Confidence 3799999988777 5779999999998887533 2343 3599999999876554321 1122 3344679999
Q ss_pred EEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC--
Q 028010 75 WGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP-- 152 (215)
Q Consensus 75 lGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~-- 152 (215)
||||+|||+|+.++| ++|.+.+ .+++||+.+... ..+++|++++.
T Consensus 83 LGIC~G~Qlla~~~G--------------G~V~~~~-------------~~e~G~~~v~~~------~~~~L~~~l~~~~ 129 (525)
T 1gpm_A 83 FGVCYGMQTMAMQLG--------------GHVEASN-------------EREFGYAQVEVV------NDSALVRGIEDAL 129 (525)
T ss_dssp EEETHHHHHHHHHHT--------------CEEECCS-------------SCEEEEEEEEEC------SCCTTTTTCCSEE
T ss_pred EEEChHHHHHHHHcC--------------CEEEeCC-------------CcccceEEEEeC------CCCHhhccCcccc
Confidence 999999999999997 3454421 346677654321 24578887754
Q ss_pred --------CeEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEe--eCCEEEEeeCCccCCC
Q 028010 153 --------DVDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVR--QGNLLGTAFHPELTAD 208 (215)
Q Consensus 153 --------~~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~--~~~v~g~QFHPE~s~~ 208 (215)
.+++.|++.+...++.. .++|+|+++ .+++++ ++++||+|||||++..
T Consensus 130 ~~~~~~~~~v~~~H~~~V~~lp~g~-~v~A~s~~~-------~i~ai~~~~~~i~gvQFHPE~~~~ 187 (525)
T 1gpm_A 130 TADGKPLLDVWMSHGDKVTAIPSDF-ITVASTESC-------PFAIMANEEKRFYGVQFHPEVTHT 187 (525)
T ss_dssp CTTSCEEEEEEEEECSEEEECCTTC-EEEEECSSC-------SCSEEEETTTTEEEESBCTTSTTS
T ss_pred ccccccceEEEEEccceeeeCCCCC-EEEEECCCC-------CEEEEEECCCCEEEEecCCCCCcc
Confidence 35677887775544433 789999876 345555 4699999999999875
No 23
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.91 E-value=1.1e-24 Score=182.35 Aligned_cols=168 Identities=16% Similarity=0.253 Sum_probs=109.3
Q ss_pred HHHHHHHHHCCCeEEEECCCCC------CCCcCEEEEcCCCc---chHHH-----H-----HhhCCHHHHHHHHHHcCCc
Q 028010 13 NEHIAALKRLGVKGVEIRKPDQ------LQNVSSLIIPGGES---TTMAR-----L-----AEYHNLFPALREFVKMGKP 73 (215)
Q Consensus 13 ~s~~~~l~~~G~~v~~~~~~~~------l~~~d~lil~GG~~---~~~~~-----l-----~~~~~l~~~i~~~~~~~~P 73 (215)
.++.++|+++|..++++....+ ++++|+|||+||.+ ..+.. + .......++|++++++++|
T Consensus 31 ~~~~~~l~~aG~~pv~lp~~~~~~~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~P 110 (254)
T 3fij_A 31 QRYVDAIQKVGGFPIALPIDDPSTAVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKP 110 (254)
T ss_dssp HHHHHHHHHHTCEEEEECCCCGGGHHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchHHHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCC
Confidence 3678999999999888875432 45899999999953 21110 0 0001146789999999999
Q ss_pred EEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCCC
Q 028010 74 VWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPD 153 (215)
Q Consensus 74 ilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~~ 153 (215)
+||||+|||+|+.++|+. -.+.++.+++....+ . ....+++||+.+... ..+++++.++..
T Consensus 111 iLGIC~G~Qll~~a~Gg~---v~~~~~~~~~~~~~h--------~--~~~~~~~g~~~v~~~------~~s~l~~~~~~~ 171 (254)
T 3fij_A 111 IFAICRGMQLVNVALGGT---LYQDISQVETKALQH--------L--QRVDEQLGSHTIDIE------PTSELAKHHPNK 171 (254)
T ss_dssp EEEETHHHHHHHHHTTCC---EESSGGGSSSCCCCC--------B--CCSCTTSCCEEEEEC------TTSSGGGTCCTT
T ss_pred EEEECHHHHHHHHHhCCc---eecccccccCccccc--------c--CCCCCccceEEEEeC------CCChHHHhcCCc
Confidence 999999999999998742 123333332211111 0 012467898766531 256777777654
Q ss_pred eEEEEEe---eCCCCccccCCcceeeecccCCCCCceEEEEeeC----CEEEEeeCCccCCC
Q 028010 154 VDVLADY---PVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQG----NLLGTAFHPELTAD 208 (215)
Q Consensus 154 ~~~~Hs~---~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~----~v~g~QFHPE~s~~ 208 (215)
+.+|++ .+...++.. .++|+++++ .+++++.+ +++|+|||||++..
T Consensus 172 -~~v~~~H~~~v~~l~~g~-~v~a~s~dg-------~ieai~~~~~~~~~~gvQfHPE~~~~ 224 (254)
T 3fij_A 172 -KLVNSLHHQFIKKLAPSF-KVTARTADG-------MIEAVEGDNLPSWYLGVQWHPELMFQ 224 (254)
T ss_dssp -EEECCBCSCEESSCCSSE-EEEEEETTC-------CEEEEEESSCSSCEEEESSCGGGTGG
T ss_pred -EEEEEeccchhhccCCCc-EEEEEeCCC-------cEEEEEecCCCCeEEEEEcCCccCCC
Confidence 444444 333333332 688999876 67788766 69999999999874
No 24
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.91 E-value=1.5e-25 Score=204.12 Aligned_cols=160 Identities=19% Similarity=0.264 Sum_probs=113.1
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCC---CCCC--CcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEE
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKP---DQLQ--NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~---~~l~--~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pil 75 (215)
.|+||+|.+.|. ++.++|+++|+.++++... +++. ++|+||++||+.+.++... ..+. +...+.++|+|
T Consensus 1 mi~ilD~g~~~~~~i~r~l~~~G~~~~i~p~~~~~~~i~~~~~dgiIlsGGp~s~~~~~~--~~~~---~~~~~~~~PvL 75 (503)
T 2ywb_A 1 MVLVLDFGSQYTRLIARRLRELRAFSLILPGDAPLEEVLKHRPQALILSGGPRSVFDPDA--PRPD---PRLFSSGLPLL 75 (503)
T ss_dssp CEEEEESSCTTHHHHHHHHHTTTCCEEEEETTCCHHHHHTTCCSEEEECCCSSCSSCTTC--CCCC---GGGGCSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHCCCEEEEEECCCCHHHHHhcCCCEEEECCCCchhccCCC--cchH---HHHHhCCCCEE
Confidence 199999988776 6889999999988887532 2333 3599999999876543321 1111 33346799999
Q ss_pred EEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCC--C
Q 028010 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGP--D 153 (215)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~--~ 153 (215)
|||+|||+|+.++| ++|.+. +.+++||+.+.. ..+++|++++. .
T Consensus 76 GIC~G~Qlla~~~G--------------G~v~~~-------------~~~e~G~~~v~~-------~~~~l~~~~~~~~~ 121 (503)
T 2ywb_A 76 GICYGMQLLAQELG--------------GRVERA-------------GRAEYGKALLTR-------HEGPLFRGLEGEVQ 121 (503)
T ss_dssp EETHHHHHHHHTTT--------------CEEECC----------------CEEEEECSE-------ECSGGGTTCCSCCE
T ss_pred EECHHHHHHHHHhC--------------CeEeeC-------------CCCccceEEEEe-------cCcHHhhcCCCccE
Confidence 99999999999986 345442 135778876653 13788888864 4
Q ss_pred eEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEe--eCCEEEEeeCCccCCC
Q 028010 154 VDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVR--QGNLLGTAFHPELTAD 208 (215)
Q Consensus 154 ~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~--~~~v~g~QFHPE~s~~ 208 (215)
+++.|++.+...++.. .++|+|+++ .+++++ ++++||+|||||++.+
T Consensus 122 v~~~H~~~v~~lp~g~-~v~A~s~~~-------~i~ai~~~~~~~~gvQFHPE~~~~ 170 (503)
T 2ywb_A 122 VWMSHQDAVTAPPPGW-RVVAETEEN-------PVAAIASPDGRAYGVQFHPEVAHT 170 (503)
T ss_dssp EEEECSCEEEECCTTC-EEEEECSSC-------SCSEEECTTSSEEEESBCTTSTTS
T ss_pred EEEECCCccccCCCCC-EEEEEECCC-------CEEEEEeCCCCEEEEecCCCcccc
Confidence 6777777765444433 789999876 445555 4689999999999975
No 25
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=99.90 E-value=2.4e-23 Score=182.91 Aligned_cols=153 Identities=15% Similarity=0.196 Sum_probs=105.5
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCCC---CC--CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEE
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPD---QL--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~~---~l--~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pil 75 (215)
+||+|+++ |.-.++.++|+++|++++++.... ++ .++|+|||+||+.+..+. ....+.|++++++++|+|
T Consensus 191 ~~V~viD~-G~k~ni~r~L~~~G~~v~vvp~~~~~e~i~~~~~DGliLsGGPgdp~~~----~~~~~~Ir~~~~~~~PIL 265 (379)
T 1a9x_B 191 FHVVAYDF-GAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPC----DYAITAIQKFLETDIPVF 265 (379)
T ss_dssp EEEEEEES-SCCHHHHHHHHHTTEEEEEEETTCCHHHHHTTCCSEEEECCCSBCSTTC----HHHHHHHHHHTTSCCCEE
T ss_pred CEEEEEEC-CChHHHHHHHHHCCCEEEEEeccCCHHHHhhcCCCEEEEeCCCCChHHH----HHHHHHHHHHHHcCCCEE
Confidence 37999999 655779999999999999886432 22 369999999997654321 123678899888899999
Q ss_pred EEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecC-CCe
Q 028010 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVG-PDV 154 (215)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~-~~~ 154 (215)
|||+|||+|+.++|+ ++.+++ .++.||+ +|+. .++ ..+
T Consensus 266 GIClG~QLLa~A~GG--------------~v~k~~-------------~gh~g~n-------------~pv~-~~~~g~v 304 (379)
T 1a9x_B 266 GICLGHQLLALASGA--------------KTVKMK-------------FGHHGGN-------------HPVK-DVEKNVV 304 (379)
T ss_dssp EETHHHHHHHHHTTC--------------CEEEEE-------------EEEEEEE-------------EEEE-ETTTTEE
T ss_pred EECchHHHHHHHhCc--------------EEEecc-------------cccccCc-------------eeeE-ecCCCcE
Confidence 999999999999973 344432 2344542 2222 222 233
Q ss_pred EE---EEEeeCCC--CccccCCcceee-ecccCCCCCceEEEEe--eCCEEEEeeCCccCC
Q 028010 155 DV---LADYPVPS--NKVLYSSSTVEI-QEENAMPEKKVIVAVR--QGNLLGTAFHPELTA 207 (215)
Q Consensus 155 ~~---~Hs~~~~~--~~~~~~~~la~s-~~~~~~~~~~~~~~~~--~~~v~g~QFHPE~s~ 207 (215)
++ .|+|.+.. .++.. .+++.+ +.+ .+++++ +.++||+|||||++.
T Consensus 305 ~its~~H~~aV~~~~Lp~~~-~v~a~s~~Dg-------~ieai~~~~~pi~gVQFHPE~~~ 357 (379)
T 1a9x_B 305 MITAQNHGFAVDEATLPANL-RVTHKSLFDG-------TLQGIHRTDKPAFSFQGNPEASP 357 (379)
T ss_dssp EEEEEEEEEEECSTTCCTTE-EEEEEETTTC-------CEEEEEESSSSEEEESSCTTCSS
T ss_pred EEEecCccceEecccCCCCe-EEEEEeCCCC-------cEEEEEECCCCEEEEEeCCcCCC
Confidence 43 68887753 33322 567776 332 466665 458999999999987
No 26
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.88 E-value=2.2e-23 Score=194.37 Aligned_cols=164 Identities=15% Similarity=0.138 Sum_probs=112.6
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCC--CCCCCcCEEEEcCCCcchH----HHHHhhCCHHHHHHHHHHcCCc
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKP--DQLQNVSSLIIPGGESTTM----ARLAEYHNLFPALREFVKMGKP 73 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~--~~l~~~d~lil~GG~~~~~----~~l~~~~~l~~~i~~~~~~~~P 73 (215)
|+|.|+++.+.+. ++.++|+++|++++++... .++.++|+|||+||+.+.. .++ ..+.++|+.+++.++|
T Consensus 447 k~IlviD~gdsf~~~l~~~l~~~G~~v~Vv~~d~~~~~~~~DgIIlsGGPg~p~d~~~p~i---~~~~~lI~~a~~~~iP 523 (645)
T 3r75_A 447 CRALIVDAEDHFTAMIAQQLSSLGLATEVCGVHDAVDLARYDVVVMGPGPGDPSDAGDPRI---ARLYAWLRHLIDEGKP 523 (645)
T ss_dssp CEEEEEESSCTHHHHHHHHHHHTTCEEEEEETTCCCCGGGCSEEEECCCSSCTTCTTSHHH---HHHHHHHHHHHHHTCC
T ss_pred CEEEEEECCccHHHHHHHHHHHCCCEEEEEECCCcccccCCCEEEECCCCCChhhhhhhhH---HHHHHHHHHHHHCCCC
Confidence 5899999988776 6789999999999888643 3456799999999865422 233 2346788888889999
Q ss_pred EEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCCC
Q 028010 74 VWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPD 153 (215)
Q Consensus 74 ilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~~ 153 (215)
+||||+|||+|+.++|+ +|.+. +.++.||+.... ...++++.+++..
T Consensus 524 iLGIClG~QlLa~alGG--------------~V~~~-------------~~~~~G~~~~i~------~~~~~l~~~~~~~ 570 (645)
T 3r75_A 524 FMAVCLSHQILNAILGI--------------PLVRR-------------EVPNQGIQVEID------LFGQRERVGFYNT 570 (645)
T ss_dssp EEEETHHHHHHHHHTTC--------------CEEEE-------------EEEEEEEEEEEE------ETTEEEEEEEEEE
T ss_pred EEEECHHHHHHHHHhCC--------------EEEcC-------------CCcccccceEEe------eecCcceecCCCc
Confidence 99999999999999973 33332 123456542110 0134566665443
Q ss_pred eEE--EEEeeCCCCccccCCcceeeecccCCCCCceEEEEeeCCEEEEeeCCccCCC
Q 028010 154 VDV--LADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVRQGNLLGTAFHPELTAD 208 (215)
Q Consensus 154 ~~~--~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~~~~v~g~QFHPE~s~~ 208 (215)
+.+ .|...+...+.. ..++|+|++| .+++++++++||+|||||++..
T Consensus 571 ~~v~~~h~~~~~~lp~g-~~v~A~s~dg-------~i~Ai~~~~~~GVQFHPE~~~t 619 (645)
T 3r75_A 571 YVAQTVRDEMDVDGVGT-VAISRDPRTG-------EVHALRGPTFSSMQFHAESVLT 619 (645)
T ss_dssp EEEBCSCSEEEETTTEE-EEEEECTTTC-------BEEEEEETTEEEESSBTTSTTC
T ss_pred EEEEEehhhccccCCCC-eEEEEEcCCC-------cEEEEEcCCEEEEEeCCeecCC
Confidence 333 232222222332 2688988875 7889999999999999999764
No 27
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=99.87 E-value=2.3e-23 Score=176.21 Aligned_cols=182 Identities=14% Similarity=0.141 Sum_probs=111.4
Q ss_pred EEEEE-ec----CCChHHHHHHHHHCC----CeEEEEC--CC-----------CCCCCcCEEEEcCCCcchHHHHHhhCC
Q 028010 2 VVGVL-AL----QGSFNEHIAALKRLG----VKGVEIR--KP-----------DQLQNVSSLIIPGGESTTMARLAEYHN 59 (215)
Q Consensus 2 ~v~il-~~----~G~~~s~~~~l~~~G----~~v~~~~--~~-----------~~l~~~d~lil~GG~~~~~~~l~~~~~ 59 (215)
||+|+ .+ .+||.|+.++|+++| +++.++. .. +.+.++|+||+|||+.+. ... +
T Consensus 10 ~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~dgiil~GG~~~~--~~~---~ 84 (273)
T 2w7t_A 10 RIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPNADEARKALLGCDGIFVPGGFGNR--GVD---G 84 (273)
T ss_dssp EEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTTTHHHHHHHHTCSEEEECCCCTTT--THH---H
T ss_pred EEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhcccccchhHHHHHhhCCEEEecCCCCCc--Cch---h
Confidence 78998 66 789999998887665 4455542 11 124579999999997542 121 3
Q ss_pred HHHHHHHHHHcCCcEEEEehHHHHHHHhhccCCCC----C---------ccccceeeeEEEeccCCCcceeeeeecccCc
Q 028010 60 LFPALREFVKMGKPVWGTCAGLIFLANKAVGQKLG----G---------QELVGGLDCTVHRNFFGSQIQSFEAELSVPA 126 (215)
Q Consensus 60 l~~~i~~~~~~~~PilGIC~G~QlLa~~~~~~~~~----~---------~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~ 126 (215)
..++++.+.+.++|+||||+|||+|+.++|+...+ . .+.+++++..+.+ +. ...+
T Consensus 85 ~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~~~~~~---------~~---~~~~ 152 (273)
T 2w7t_A 85 KCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMDCDRNK---------MG---ANMH 152 (273)
T ss_dssp HHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCGGGBCS---------SC---BCCE
T ss_pred HHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeeccccccc---------cC---Cccc
Confidence 46788888888999999999999999988753210 0 1122222211110 00 0125
Q ss_pred ccCCCCCCcceeeeeeeCceeeecCC--CeEE--EEEeeCCCC------ccccCCcceeeecccCCCCC-ceEEEEeeC-
Q 028010 127 LASQEGGPETFRGVFIRAPAVLDVGP--DVDV--LADYPVPSN------KVLYSSSTVEIQEENAMPEK-KVIVAVRQG- 194 (215)
Q Consensus 127 ~Gw~~~~~~~~~~~~~~~pl~~~~~~--~~~~--~Hs~~~~~~------~~~~~~~la~s~~~~~~~~~-~~~~~~~~~- 194 (215)
+||+++.... ..++++..++. .+++ .|||.+.+. ++. ..++|++++++ +. .++++++.+
T Consensus 153 ~g~~~v~~~~-----~~s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g-~~v~A~s~d~~---~~g~~ieaie~~~ 223 (273)
T 2w7t_A 153 LGACDVYIVE-----KSSIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAG-LCISAVTDPTF---SSRCRVEAVENPS 223 (273)
T ss_dssp EEEEEEEECC-----TTSHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTT-CEEEEESCTTC---CTTCCEEEEECTT
T ss_pred ccceEEEEec-----CCcHHHHHhCCCceEEeecccccccCHHHHHhhccCC-cEEEEEcCCcC---CCCCeEEEEEcCC
Confidence 7887654210 13455544442 4666 456666432 222 26789988720 00 378888865
Q ss_pred --CEEEEeeCCccCCCC
Q 028010 195 --NLLGTAFHPELTADT 209 (215)
Q Consensus 195 --~v~g~QFHPE~s~~~ 209 (215)
+++|+|||||++...
T Consensus 224 ~p~~~GvQfHPE~~~~~ 240 (273)
T 2w7t_A 224 LRFFLAVQFHPEFISTP 240 (273)
T ss_dssp SSSEEEESSCGGGSCBT
T ss_pred CCeEEEEeCCCCcCCCC
Confidence 477999999998754
No 28
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.87 E-value=1.3e-22 Score=174.84 Aligned_cols=170 Identities=19% Similarity=0.333 Sum_probs=106.3
Q ss_pred EEEEEecCCCh------------HHHHHHHHHCCCeEEEECCCCC-------CCCcCEEEEcCCCcc----hHHHHHhhC
Q 028010 2 VVGVLALQGSF------------NEHIAALKRLGVKGVEIRKPDQ-------LQNVSSLIIPGGEST----TMARLAEYH 58 (215)
Q Consensus 2 ~v~il~~~G~~------------~s~~~~l~~~G~~v~~~~~~~~-------l~~~d~lil~GG~~~----~~~~l~~~~ 58 (215)
+|||+...+.. .++.++|+++|++++++....+ ++++|+||||||..+ .+..+. .
T Consensus 32 ~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~~~~i~~~l~~~dglil~GG~~~v~p~~~~~~~--~ 109 (315)
T 1l9x_A 32 IIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVA--K 109 (315)
T ss_dssp EEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEEEECCCCCCTTTCHHHHHH--H
T ss_pred EEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCCHHHHHHHHhcCCEEEEeCCCcccChhhhhHHH--H
Confidence 68888764432 2678999999999999876432 247899999998643 233322 2
Q ss_pred CHHHHHHHHHHc--CCcEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcc
Q 028010 59 NLFPALREFVKM--GKPVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPET 136 (215)
Q Consensus 59 ~l~~~i~~~~~~--~~PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~ 136 (215)
.+.+.++++.++ ++|+||||+|||+|+.++|+. ..++..+. ... ..|.. . +..
T Consensus 110 ~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~-----~~~~~~~~-~g~--------------~~p~~-~--~~~-- 164 (315)
T 1l9x_A 110 IFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGE-----CLLTATDT-VDV--------------AMPLN-F--TGG-- 164 (315)
T ss_dssp HHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSS-----CCCEEEEE-EEE--------------EECCE-E--CST--
T ss_pred HHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCc-----cccccccc-cCC--------------CCCee-e--ccC--
Confidence 355666666655 499999999999999999752 11111100 000 01110 0 000
Q ss_pred eeeeeeeCceeeecC----------CCeEEEEEeeCC--------CCccccCCcceeeecccCCCCCceEEEEee--CCE
Q 028010 137 FRGVFIRAPAVLDVG----------PDVDVLADYPVP--------SNKVLYSSSTVEIQEENAMPEKKVIVAVRQ--GNL 196 (215)
Q Consensus 137 ~~~~~~~~pl~~~~~----------~~~~~~Hs~~~~--------~~~~~~~~~la~s~~~~~~~~~~~~~~~~~--~~v 196 (215)
. ..++++++++ ..++.+|++.+. ..++.. .++|+++++ ..+++++++. .++
T Consensus 165 -~---~~s~L~~~~~~~~~~~l~~~~~~~~~H~~~V~~~~~~~~~~l~~g~-~v~A~s~dg----~ve~i~~i~~~~~~i 235 (315)
T 1l9x_A 165 -Q---LHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFF-NVLTTNTDG----KIEFISTMEGYKYPV 235 (315)
T ss_dssp -T---TTCSTTTTSCHHHHHHHHHSCCEEEEEEEECBHHHHHTCHHHHHHE-EEEEEEESS----SCEEEEEEEESSSCE
T ss_pred -C---CCChHHHhcChhhhhhccccceEEEhhhhhcCccccccccccCCCC-EEEEEcCCC----CEEEEEEeccCCCCE
Confidence 0 1445666553 235679999886 233322 688998876 2344555554 589
Q ss_pred EEEeeCCccCC
Q 028010 197 LGTAFHPELTA 207 (215)
Q Consensus 197 ~g~QFHPE~s~ 207 (215)
+|+|||||++.
T Consensus 236 ~GVQfHPE~~~ 246 (315)
T 1l9x_A 236 YGVQWHPEKAP 246 (315)
T ss_dssp EEESSCTTHHH
T ss_pred EEEEeCCCCCc
Confidence 99999999854
No 29
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.86 E-value=4.6e-23 Score=193.61 Aligned_cols=159 Identities=20% Similarity=0.270 Sum_probs=104.2
Q ss_pred EEEEEecCCChHH-HHHHHHHCCCeEEEECCCC---CC--CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEE
Q 028010 2 VVGVLALQGSFNE-HIAALKRLGVKGVEIRKPD---QL--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 2 ~v~il~~~G~~~s-~~~~l~~~G~~v~~~~~~~---~l--~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pil 75 (215)
||+||+|.+.|.. +.++|+++|+.++++.... ++ .++|+||++||+++.++.-. ..+. +...+.++|+|
T Consensus 31 ~I~VLDfg~q~~~liar~lre~Gv~~~ivp~~~~~e~i~~~~~dGIILsGGp~s~~~~~~--~~~~---~~i~~~g~PvL 105 (697)
T 2vxo_A 31 AVVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGPNSVYAEDA--PWFD---PAIFTIGKPVL 105 (697)
T ss_dssp CEEEEEEC--CHHHHHHHHHHTTCCEEEEETTCCHHHHHHHTCSEEEEEECC-------C--CCCC---GGGTTSSCCEE
T ss_pred EEEEEECCCchHHHHHHHHHHCCCEEEEEECCCCHHHHhhcCCCEEEECCCCCcccCccc--hhHH---HHHHhCCCCEE
Confidence 6999999998886 5689999999998887532 23 47899999999876543211 1111 23346799999
Q ss_pred EEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCCCCCcceeeeeeeCceeeecCCC--
Q 028010 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPD-- 153 (215)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~~~~~~~~~~~~~~pl~~~~~~~-- 153 (215)
|||+|||+|+.++|+ ++.+. +.++.||+.+... ..+++|++++..
T Consensus 106 GIC~G~QlLa~~lGG--------------~v~~~-------------~~~e~G~~~v~~~------~~~~Lf~~l~~~~~ 152 (697)
T 2vxo_A 106 GICYGMQMMNKVFGG--------------TVHKK-------------SVREDGVFNISVD------NTCSLFRGLQKEEV 152 (697)
T ss_dssp EEEHHHHHHHHHTTC--------------CBCC--------------------CEEEEEC------TTSGGGTTCCSEEE
T ss_pred EECHHHHHHHHHhCC--------------eEeec-------------CCCccceEEEEec------CCChhhhcCCccCc
Confidence 999999999999874 22221 1236677654421 246788888654
Q ss_pred eEEEEEeeCCCCccccCCcceeeecccCCCCCceEEEEe--eCCEEEEeeCCccCC
Q 028010 154 VDVLADYPVPSNKVLYSSSTVEIQEENAMPEKKVIVAVR--QGNLLGTAFHPELTA 207 (215)
Q Consensus 154 ~~~~Hs~~~~~~~~~~~~~la~s~~~~~~~~~~~~~~~~--~~~v~g~QFHPE~s~ 207 (215)
+++.|++.+...++.. .++|+|+ ..+++++ ++++||+|||||++.
T Consensus 153 v~~~H~~~V~~lp~g~-~vlA~s~--------~~i~ai~~~~~~i~GvQFHPE~~~ 199 (697)
T 2vxo_A 153 VLLTHGDSVDKVADGF-KVVARSG--------NIVAGIANESKKLYGAQFHPEVGL 199 (697)
T ss_dssp ECCCSSCCBSSCCTTC-EEEEEET--------TEEEEEEETTTTEEEESSCTTSSS
T ss_pred ceeecccceecCCCCe-EEEEEeC--------CceEEEEeCCCCEEEEEecccCCC
Confidence 5556777765555443 6888884 2677776 579999999999985
No 30
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.83 E-value=1e-20 Score=162.11 Aligned_cols=168 Identities=10% Similarity=-0.075 Sum_probs=105.8
Q ss_pred CEEEEEecCCChHHHHHH----HHHCC--CeEEEECCC--C--------------C-----CCCcCEEEEcCCCcch--H
Q 028010 1 MVVGVLALQGSFNEHIAA----LKRLG--VKGVEIRKP--D--------------Q-----LQNVSSLIIPGGESTT--M 51 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~----l~~~G--~~v~~~~~~--~--------------~-----l~~~d~lil~GG~~~~--~ 51 (215)
|||+||++.-+.....+. |.... ++++.++.. + + .+++|++||+||+... .
T Consensus 48 lkI~ILnlmp~k~~te~qf~rlL~~~~~qv~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGsP~~~~~~ 127 (312)
T 2h2w_A 48 LEILILNLMPDKIKTEIQLLRLLGNTPLQVNVTLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGAPVELLPF 127 (312)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHHHSSSSCEEEEEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCCSCTTSCG
T ss_pred ceEEEEeCCCCcCchHHHHHHHhcCCCCcEEEEEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCCCCCCCCC
Confidence 699999998877655443 33334 444444321 1 1 3679999999997421 2
Q ss_pred HHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCC
Q 028010 52 ARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQE 131 (215)
Q Consensus 52 ~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~ 131 (215)
+...+-..+.+.++.+.++++|+||||+|+|+++.++++.. ++.. +..+.||..
T Consensus 128 ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~------------k~~~--------------~~K~~Gv~~ 181 (312)
T 2h2w_A 128 EEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIP------------KYEL--------------PQKLSGVYK 181 (312)
T ss_dssp GGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCC------------CEEE--------------EEEEEEEEE
T ss_pred ccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCc------------cccC--------------CCCEEEEEE
Confidence 22222123456777777789999999999999777765310 0110 011334433
Q ss_pred CCCcceeeeeeeCceeeecCCCeEEEEEeeC-------CCCccccCCcceeeecccCCCCCceEEEEe-eCCEEEEeeCC
Q 028010 132 GGPETFRGVFIRAPAVLDVGPDVDVLADYPV-------PSNKVLYSSSTVEIQEENAMPEKKVIVAVR-QGNLLGTAFHP 203 (215)
Q Consensus 132 ~~~~~~~~~~~~~pl~~~~~~~~~~~Hs~~~-------~~~~~~~~~~la~s~~~~~~~~~~~~~~~~-~~~v~g~QFHP 203 (215)
.+. . ..+|++.+++..|.+.||++. ...+ .+++||+|+.| ..+++.. .++++++||||
T Consensus 182 ~~~---~---~~~pL~~g~~~~f~vphsr~~e~~~~~v~~~p--ga~vLA~S~~~------~~q~~~~~~~~~~~vQgHP 247 (312)
T 2h2w_A 182 HRV---A---KDSVLFRGHDDFFWAPHSRYTEVKKEDIDKVP--ELEILAESDEA------GVYVVANKSERQIFVTGHP 247 (312)
T ss_dssp EEE---S---SCCGGGTTCCSEEEEEEEEEEECCHHHHTTCC---CEEEEEETTT------EEEEEECSSSSEEEECSCT
T ss_pred EEE---c---CCCccccCCCCceEeeEEeccccCHHHccCCC--CCEEEEcCCCC------cceEEEecCCCEEEEECCC
Confidence 221 1 267888888888999998432 2222 34899999987 3444444 45899999999
Q ss_pred ccCCC
Q 028010 204 ELTAD 208 (215)
Q Consensus 204 E~s~~ 208 (215)
|.+.+
T Consensus 248 Eyd~~ 252 (312)
T 2h2w_A 248 EYDRY 252 (312)
T ss_dssp TCCTT
T ss_pred CCCHH
Confidence 99875
No 31
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.83 E-value=8.5e-21 Score=162.05 Aligned_cols=169 Identities=14% Similarity=0.066 Sum_probs=106.1
Q ss_pred CEEEEEecCCChHHHHHHHHH----CC--CeEEEECCC--C-------------------CCCCcCEEEEcCCCcch--H
Q 028010 1 MVVGVLALQGSFNEHIAALKR----LG--VKGVEIRKP--D-------------------QLQNVSSLIIPGGESTT--M 51 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~----~G--~~v~~~~~~--~-------------------~l~~~d~lil~GG~~~~--~ 51 (215)
|||+||++.-+.....+.|.+ .. ++++.++.. + +.+++|++||+||+... .
T Consensus 36 lkI~ILnlmp~k~~te~qf~rlL~~~~~qv~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGap~~~~~~ 115 (301)
T 2vdj_A 36 LKIAILNLMPTKQETEAQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVETLSF 115 (301)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHHTCSSSCEEEEEECCCC------------CCEECHHHHTTSCEEEEEECCCTTTTSCG
T ss_pred ceEEEEeCCCCcCchHHHHHHHhcCCCCcEEEEEEeccCCCCCCccHHHHhhcccCcccccccccCEEEECCCCCcCCCc
Confidence 699999998877765544433 23 445444321 1 13679999999996421 2
Q ss_pred HHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHhhccCCCCCccccceeeeEEEeccCCCcceeeeeecccCcccCCC
Q 028010 52 ARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQE 131 (215)
Q Consensus 52 ~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~~~~~~~~~~~lG~~~~~v~~~~~~~~~~~~~~~~~~p~~Gw~~ 131 (215)
+...+-..+.+.|+.+.++++|+||||+|+|+++.++++.. ++.. +..+.||..
T Consensus 116 ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~------------k~~~--------------~~K~~Gv~~ 169 (301)
T 2vdj_A 116 EEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQ------------KYPL--------------KEKMFGVFE 169 (301)
T ss_dssp GGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCC------------CEEE--------------EEEEEEEEE
T ss_pred ccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCc------------cccC--------------CCCEEEEEE
Confidence 22222123466777777789999999999999777765310 0000 011233322
Q ss_pred CCCcceeeeeeeCceeeecCCCeEEEEEeeC-------CCCccccCCcceeeecccCCCCCceEEEEe-eCCEEEEeeCC
Q 028010 132 GGPETFRGVFIRAPAVLDVGPDVDVLADYPV-------PSNKVLYSSSTVEIQEENAMPEKKVIVAVR-QGNLLGTAFHP 203 (215)
Q Consensus 132 ~~~~~~~~~~~~~pl~~~~~~~~~~~Hs~~~-------~~~~~~~~~~la~s~~~~~~~~~~~~~~~~-~~~v~g~QFHP 203 (215)
.+. .. ..+|++.+++..|...||++. ...+ .+++||+|+.| ..+++.. .++++++||||
T Consensus 170 ~~~---~~--~~~pL~~g~~~~f~~phsr~~~~~~~~v~~~p--ga~vLA~S~~~------~~~~~~~~~~~~~~vQgHp 236 (301)
T 2vdj_A 170 HEV---RE--QHVKLLQGFDELFFAVHSRHTEVRESDIREVK--ELTLLANSEEA------GVHLVIGQEGRQVFALGHS 236 (301)
T ss_dssp EEE---CC--SSCGGGTTCCSEEEEEEEEEEECCHHHHHTCT--TEEEEEEETTT------EEEEEEEGGGTEEEECSCT
T ss_pred EEe---cC--CCCccccCCCCceEeeeEeccCcCHHHccCCC--CCEEEEeCCCC------cceEEEecCCCEEEEECCC
Confidence 211 10 267888888888999998541 2222 34899999987 3444444 56999999999
Q ss_pred ccCCC
Q 028010 204 ELTAD 208 (215)
Q Consensus 204 E~s~~ 208 (215)
|.+.+
T Consensus 237 Eyd~~ 241 (301)
T 2vdj_A 237 EYSCD 241 (301)
T ss_dssp TCCTT
T ss_pred CCCHH
Confidence 99875
No 32
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=99.80 E-value=5.8e-21 Score=162.67 Aligned_cols=85 Identities=14% Similarity=0.196 Sum_probs=63.9
Q ss_pred CEEEEE-ec---CCChHHHHHHHHHCCC----eEEEECC-------------CCC-------CCCcCEEEEcCCCcchHH
Q 028010 1 MVVGVL-AL---QGSFNEHIAALKRLGV----KGVEIRK-------------PDQ-------LQNVSSLIIPGGESTTMA 52 (215)
Q Consensus 1 m~v~il-~~---~G~~~s~~~~l~~~G~----~v~~~~~-------------~~~-------l~~~d~lil~GG~~~~~~ 52 (215)
|||+|+ ++ +.++.++.++|+++|+ +++++.. +++ +.++|+||||||+++.
T Consensus 26 ~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dgiil~GG~~~~-- 103 (289)
T 2v4u_A 26 CSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILVPGGFGIR-- 103 (289)
T ss_dssp EEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHHHCSEEEECSCCSST--
T ss_pred eEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHhhCCEEEecCCCCch--
Confidence 489999 66 2338899999998875 3343321 111 5678999999997652
Q ss_pred HHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHhhcc
Q 028010 53 RLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAVG 90 (215)
Q Consensus 53 ~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~~~ 90 (215)
.+ .++.++|+++++.++|+||||+|+|+|+.++|+
T Consensus 104 ~~---~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg 138 (289)
T 2v4u_A 104 GT---LGKLQAISWARTKKIPFLGVXLGMQLAVIEFAR 138 (289)
T ss_dssp TH---HHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHH
T ss_pred hH---HHHHHHHHHHHHcCCcEEEECccHHHHHHHHhc
Confidence 22 245788999989999999999999999999975
No 33
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=99.74 E-value=1.7e-19 Score=164.73 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=56.6
Q ss_pred cCCChHHHHHHHHH----CCCeEEEEC--CC--------CCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCc
Q 028010 8 LQGSFNEHIAALKR----LGVKGVEIR--KP--------DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKP 73 (215)
Q Consensus 8 ~~G~~~s~~~~l~~----~G~~v~~~~--~~--------~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~P 73 (215)
+..+|.|+.++|++ .|+++.++. .. +.+.++|+||+|||+.+.. . .+..+.++.+.+.++|
T Consensus 312 l~D~y~Sv~~aL~~~g~~~g~~v~I~~~d~~~~~~~~~~~~L~~~DGIILpGGfGd~~--~---~g~i~~ir~a~e~~iP 386 (550)
T 1vco_A 312 MPDAYLSLLEALRHAGIKNRARVEVKWVDAESLEAADLEEAFRDVSGILVPGGFGVRG--I---EGKVRAAQYARERKIP 386 (550)
T ss_dssp --CTTHHHHHHHHHHHHHTTEEEEEEEEEGGGC--CCHHHHTTTCSCEEECCCCSSTT--H---HHHHHHHHHHHHTTCC
T ss_pred EEecHHHHHHHHHHHHHHcCCeEEEEEeCccccccchHHHHHhcCCEEEECCCCCCcc--h---hhhHHHHHHHHHCCCc
Confidence 45678887777665 456776652 21 1256899999999976531 1 1346788888889999
Q ss_pred EEEEehHHHHHHHhhcc
Q 028010 74 VWGTCAGLIFLANKAVG 90 (215)
Q Consensus 74 ilGIC~G~QlLa~~~~~ 90 (215)
+||||+|||+|+.++++
T Consensus 387 iLGICLGmQlL~~a~Gg 403 (550)
T 1vco_A 387 YLGICLGLQIAVIEFAR 403 (550)
T ss_dssp EEEETHHHHHHHHHHHH
T ss_pred EEEECcCHHHHHHHhCc
Confidence 99999999999999875
No 34
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=99.65 E-value=7.2e-17 Score=145.73 Aligned_cols=85 Identities=18% Similarity=0.242 Sum_probs=64.4
Q ss_pred EEEEEe----cCCChHHHHHHHHHCC----CeEEE--ECC----------CCCCCCcCEEEEcCCCcchHHHHHhhCCHH
Q 028010 2 VVGVLA----LQGSFNEHIAALKRLG----VKGVE--IRK----------PDQLQNVSSLIIPGGESTTMARLAEYHNLF 61 (215)
Q Consensus 2 ~v~il~----~~G~~~s~~~~l~~~G----~~v~~--~~~----------~~~l~~~d~lil~GG~~~~~~~l~~~~~l~ 61 (215)
+|+++- +..+|.|+.++|+.+| .++.+ ++. .+.++++|+||+|||+++. .. .++.
T Consensus 295 ~IalVGKY~~l~DaY~Sv~eAL~hag~~~~~~V~I~wIds~~l~~~~~~~~~~L~~~DgIIlpGG~G~~--~~---~g~i 369 (535)
T 3nva_A 295 NIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLIWIESTDLESDTKNLNEILGNVNGIIVLPGFGSR--GA---EGKI 369 (535)
T ss_dssp EEEEEESCTTSGGGGHHHHHHHHHHHHHTTCEEEEEEEEGGGGCCSSSCCTTTTTSCSEEEECCCCSST--TH---HHHH
T ss_pred EEEEEecCcCCchhHHHHHHHHHHHHHHcCCCeEEEEecchhccccccchhhhccCCCEEEECCCCCCc--cH---HHHH
Confidence 455543 5678999999998765 44444 332 1457889999999997653 11 2457
Q ss_pred HHHHHHHHcCCcEEEEehHHHHHHHhhccC
Q 028010 62 PALREFVKMGKPVWGTCAGLIFLANKAVGQ 91 (215)
Q Consensus 62 ~~i~~~~~~~~PilGIC~G~QlLa~~~~~~ 91 (215)
++|+.+.++++|+||||+|||+|+.++|+.
T Consensus 370 ~~ir~a~~~~~PiLGIClG~Qll~va~Gg~ 399 (535)
T 3nva_A 370 KAIKYAREHNIPFLGICFGFQLSIVEFARD 399 (535)
T ss_dssp HHHHHHHHHTCCEEEETHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCcEEEECcchhHHHHHhhcc
Confidence 889999999999999999999999999863
No 35
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=99.59 E-value=7e-15 Score=145.32 Aligned_cols=86 Identities=27% Similarity=0.351 Sum_probs=66.7
Q ss_pred CEEEEEecCCCh--HHHHHHHHHCCCeEEEEC------CCCCCCCcCEEEEcCCCcc--hH--------HHHHhhCCHHH
Q 028010 1 MVVGVLALQGSF--NEHIAALKRLGVKGVEIR------KPDQLQNVSSLIIPGGEST--TM--------ARLAEYHNLFP 62 (215)
Q Consensus 1 m~v~il~~~G~~--~s~~~~l~~~G~~v~~~~------~~~~l~~~d~lil~GG~~~--~~--------~~l~~~~~l~~ 62 (215)
+||+||.++|.. .++.++|+++|++++++. ..++++++|+||+|||++. .+ ..+. +..+.+
T Consensus 1048 pkVaIi~~~G~N~~~~~~~A~~~aG~~~~~v~~~dl~~~~~~l~~~d~lvlPGGfSygD~l~~g~~~a~~~l~-~~~l~~ 1126 (1303)
T 3ugj_A 1048 PKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILF-NHRVRD 1126 (1303)
T ss_dssp CEEEEEECTTCCCHHHHHHHHHHTTCEEEEEEHHHHHTTSCCGGGCSEEEECCSCGGGGTTSTTHHHHHHHHT-SHHHHH
T ss_pred CEEEEEecCCcCCHHHHHHHHHHhCCceEEEeecccccCcccHhhCCEEEECCCCcchhhhccchhHHHHHHh-chhHHH
Confidence 489999998854 488999999999987763 4567889999999998642 11 1222 234566
Q ss_pred HHHHHH-HcCCcEEEEehHHHHHHHh
Q 028010 63 ALREFV-KMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 63 ~i~~~~-~~~~PilGIC~G~QlLa~~ 87 (215)
.+++++ +.++|+||||.|+|+|++.
T Consensus 1127 ~l~~~~~~~g~pvLGICnG~QlL~e~ 1152 (1303)
T 3ugj_A 1127 EFETFFHRPQTLALGVCNGCQMMSNL 1152 (1303)
T ss_dssp HHHHHHHSSSCEEEEETHHHHHHHTT
T ss_pred HHHHHHHhCCCcEEEECHHHHHHHHh
Confidence 788765 5799999999999999987
No 36
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=99.58 E-value=3.1e-16 Score=143.15 Aligned_cols=78 Identities=21% Similarity=0.284 Sum_probs=59.0
Q ss_pred cCCChHHHHHHHHHCCCe----EEEECC---------CCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcE
Q 028010 8 LQGSFNEHIAALKRLGVK----GVEIRK---------PDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPV 74 (215)
Q Consensus 8 ~~G~~~s~~~~l~~~G~~----v~~~~~---------~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pi 74 (215)
+..+|.|+.++|+++|++ +.+... .+.+.++|+|++|||+.+.. . .+..+.++.+.+.++|+
T Consensus 301 l~D~y~Si~~aL~~~G~~~~~~V~i~~~d~e~i~~~~~~~l~~~DGIilsGGpg~~~--~---~g~~~~i~~a~~~~~Pi 375 (545)
T 1s1m_A 301 LPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRG--V---EGMITTARFARENNIPY 375 (545)
T ss_dssp SGGGGHHHHHHHHHHHHHHTEEEEEEEEEHHHHHHHCTTTTTTCSEEEECCCCSSTT--H---HHHHHHHHHHHHTTCCE
T ss_pred EEEHHHHHHHHHHHhCcccCCeEEEccCCHHHhhhhhhhhhhcCCEEEECCCCCCcc--c---hhhHHHHHHHHHCCCcE
Confidence 445788999999998853 343321 13367899999999976532 1 13467888888889999
Q ss_pred EEEehHHHHHHHhhcc
Q 028010 75 WGTCAGLIFLANKAVG 90 (215)
Q Consensus 75 lGIC~G~QlLa~~~~~ 90 (215)
||||+|||+|+.++|+
T Consensus 376 LGIClG~Qll~va~Gg 391 (545)
T 1s1m_A 376 LGICLGMQVALIDYAR 391 (545)
T ss_dssp EEETHHHHHHHHHHHH
T ss_pred EEECChHHHHHHHhCC
Confidence 9999999999999875
No 37
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=99.50 E-value=6.5e-15 Score=121.24 Aligned_cols=107 Identities=16% Similarity=0.222 Sum_probs=86.0
Q ss_pred EEEEEecC-------CChHHHHHHHHHCCCeEEEECCC----CCCCCcCEEEEcCCCcc-hHHHHHhhCCHHHHHHHHHH
Q 028010 2 VVGVLALQ-------GSFNEHIAALKRLGVKGVEIRKP----DQLQNVSSLIIPGGEST-TMARLAEYHNLFPALREFVK 69 (215)
Q Consensus 2 ~v~il~~~-------G~~~s~~~~l~~~G~~v~~~~~~----~~l~~~d~lil~GG~~~-~~~~l~~~~~l~~~i~~~~~ 69 (215)
||+|+.+. ++..++.++|+++|++++.++.. +.+.++|+|++|||... .+..+.. .++.+.|+++++
T Consensus 33 ~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~-~gl~~~l~~~~~ 111 (229)
T 1fy2_A 33 SAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEKAEIIIVGGGNTFQLLKESRE-RGLLAPMADRVK 111 (229)
T ss_dssp EEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSSCHHHHHHHCSEEEECCSCHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred eEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccccHHHHHhcCCEEEECCCcHHHHHHHHHH-CChHHHHHHHHH
Confidence 79999886 45668899999999999888533 45678999999999764 4556654 789999999999
Q ss_pred cCCcEEEEehHHHHHHHhhccC-C-----CCCccccceeeeEEEec
Q 028010 70 MGKPVWGTCAGLIFLANKAVGQ-K-----LGGQELVGGLDCTVHRN 109 (215)
Q Consensus 70 ~~~PilGIC~G~QlLa~~~~~~-~-----~~~~~~lG~~~~~v~~~ 109 (215)
+|+|++|+|+|+|+|+..+.+. . .+..++||++++.+.++
T Consensus 112 ~G~p~~G~sAG~~~l~~~~~~~~d~~~~~~~~~~gLgli~~~v~~H 157 (229)
T 1fy2_A 112 RGALYIGWSAGANLACPTIRTTNDMPIVDPNGFDALDLFPLQINPH 157 (229)
T ss_dssp TTCEEEEETHHHHHTSSBSTTCCSCCCSCCSCSBCCCCSSSEEECS
T ss_pred cCCEEEEECHHHHhhcccceecCCCCcccCCcCCcCCCCCceecCC
Confidence 9999999999999999987432 0 12467899999888775
No 38
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.38 E-value=2.4e-13 Score=110.19 Aligned_cols=107 Identities=17% Similarity=0.206 Sum_probs=82.5
Q ss_pred EEEEEecC-C------ChHHHHHHHHHCCCeEEEEC----CC----CCCCCcCEEEEcCCCc-chHHHHHhhCCHHHHHH
Q 028010 2 VVGVLALQ-G------SFNEHIAALKRLGVKGVEIR----KP----DQLQNVSSLIIPGGES-TTMARLAEYHNLFPALR 65 (215)
Q Consensus 2 ~v~il~~~-G------~~~s~~~~l~~~G~~v~~~~----~~----~~l~~~d~lil~GG~~-~~~~~l~~~~~l~~~i~ 65 (215)
||+++.+. | +..++.++|+++|++++.++ ++ +.+.++|+|++|||.. ..+..+.. .++.+.|+
T Consensus 29 ~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L~~-~gl~~~l~ 107 (206)
T 3l4e_A 29 TVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKR-TGADKLIL 107 (206)
T ss_dssp EEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHHHH-HTHHHHHH
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHH-CChHHHHH
Confidence 78888742 2 34578999999999998884 33 3367899999999865 45666655 78999999
Q ss_pred HHHHcCCcEEEEehHHHHHHHhhc--cC--------CCCCccccceeeeEEEec
Q 028010 66 EFVKMGKPVWGTCAGLIFLANKAV--GQ--------KLGGQELVGGLDCTVHRN 109 (215)
Q Consensus 66 ~~~~~~~PilGIC~G~QlLa~~~~--~~--------~~~~~~~lG~~~~~v~~~ 109 (215)
+++++|+|++|||+|+|+|+..+. +. .....++||+++..+.+|
T Consensus 108 ~~~~~G~p~~G~sAGa~~l~~~i~~~~~~~~~~~~~~~~~~~GLGlv~~~i~pH 161 (206)
T 3l4e_A 108 EEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPH 161 (206)
T ss_dssp HHHHTTCEEEEETHHHHTTSSBCGGGTTTSCGGGCSSCCCCBCCCCSSSEEETT
T ss_pred HHHHcCCeEEEECHHHHHhcccceeccCCCCccccCCCCcCCcccCCCCEeECC
Confidence 999999999999999999998653 11 122457899998887754
No 39
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=99.17 E-value=7.5e-11 Score=94.13 Aligned_cols=85 Identities=26% Similarity=0.466 Sum_probs=66.7
Q ss_pred CEEEEEecCCC----hHHHHHHHHHCCCeEEEECCCC----------------------CCCCcCEEEEcCCCcchHHHH
Q 028010 1 MVVGVLALQGS----FNEHIAALKRLGVKGVEIRKPD----------------------QLQNVSSLIIPGGESTTMARL 54 (215)
Q Consensus 1 m~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~~----------------------~l~~~d~lil~GG~~~~~~~l 54 (215)
|||+||.++|. +....+.|++.|++++++.... +..++|+||+|||.+. ..+
T Consensus 24 ~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG~~~--~~l 101 (193)
T 1oi4_A 24 KKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSP--DYL 101 (193)
T ss_dssp CEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTTCEEECTTSSCEEECCEEGGGCCGGGCSEEEECCBTHH--HHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCcceecCCCCeEEECCCChHHCCcccCCEEEECCCcCH--HHh
Confidence 48999999884 3456889999999988875321 1246899999999542 334
Q ss_pred HhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 55 AEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 55 ~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
..+..+.++|+++.++++|+++||.|.++|+++
T Consensus 102 ~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~a 134 (193)
T 1oi4_A 102 RGDNRFVTFTRDFVNSGKPVFAICHGPQLLISA 134 (193)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHH
T ss_pred hhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 333457899999999999999999999999987
No 40
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=99.09 E-value=2.7e-10 Score=88.60 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=66.7
Q ss_pred CEEEEEecCCC----hHHHHHHHHHCCCeEEEECCC------------------CCC--CCcCEEEEcCCCcchHHHHHh
Q 028010 1 MVVGVLALQGS----FNEHIAALKRLGVKGVEIRKP------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (215)
Q Consensus 1 m~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~------------------~~l--~~~d~lil~GG~~~~~~~l~~ 56 (215)
|||+||.++|. +....+.|++.|+++.++... +++ .++|.|++|||... ..+..
T Consensus 3 ~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~--~~~~~ 80 (168)
T 3l18_A 3 MKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRGKITGKHGYSVNVDLTFEEVDPDEFDALVLPGGKAP--EIVRL 80 (168)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSEEEECTTSCEEEECEEGGGCCGGGCSEEEECCBSHH--HHHTT
T ss_pred cEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCCEEecCCCcEEeccCChhHCCHhhCCEEEECCCcCH--HHhcc
Confidence 79999999993 335678999999998876531 122 25999999999642 23434
Q ss_pred hCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 57 ~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
+..+.++|+++.++++|+.+||.|.++|+++
T Consensus 81 ~~~l~~~l~~~~~~~k~i~aiC~G~~~La~a 111 (168)
T 3l18_A 81 NEKAVMITRRMFEDDKPVASICHGPQILISA 111 (168)
T ss_dssp CHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEECHhHHHHHHC
Confidence 4567899999999999999999999999986
No 41
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=98.91 E-value=1.5e-09 Score=85.73 Aligned_cols=84 Identities=18% Similarity=0.198 Sum_probs=63.1
Q ss_pred EEEEEecCC----ChHHHHHHHHHCCCeEEEECCC------------------CC--CCCcCEEEEcCCCcchHHHHHhh
Q 028010 2 VVGVLALQG----SFNEHIAALKRLGVKGVEIRKP------------------DQ--LQNVSSLIIPGGESTTMARLAEY 57 (215)
Q Consensus 2 ~v~il~~~G----~~~s~~~~l~~~G~~v~~~~~~------------------~~--l~~~d~lil~GG~~~~~~~l~~~ 57 (215)
+|.||..+| .+....+.|++.|++++++... ++ ..+||+|++|||.+. ..+..+
T Consensus 10 ~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~g~--~~l~~~ 87 (177)
T 4hcj_A 10 ILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIGTAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGIGC--ITLWDD 87 (177)
T ss_dssp EEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSEEEEETTSCEEEECEEGGGCCGGGCSEEEECCSGGG--GGGTTC
T ss_pred EEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCCeEeeCCCCEEecCccHHHCCHhHCCEEEECCCccH--HHHhhC
Confidence 456666655 2334678999999999886531 12 247999999999653 234444
Q ss_pred CCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 58 HNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 58 ~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
..+.++|+++.++++|+.+||.|.++|+++
T Consensus 88 ~~~~~~l~~~~~~~k~iaaIC~g~~~La~a 117 (177)
T 4hcj_A 88 WRTQGLAKLFLDNQKIVAGIGSGVVIMANA 117 (177)
T ss_dssp HHHHHHHHHHHHTTCEEEEETTHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCEEEEecccHHHHHHC
Confidence 567899999999999999999999999986
No 42
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=98.89 E-value=3.2e-09 Score=85.36 Aligned_cols=85 Identities=21% Similarity=0.262 Sum_probs=65.8
Q ss_pred EEEEEecCCC----hHHHHHHHHHCCCeEEEECCCC-----------------------CCCCcCEEEEcCCCcchHHHH
Q 028010 2 VVGVLALQGS----FNEHIAALKRLGVKGVEIRKPD-----------------------QLQNVSSLIIPGGESTTMARL 54 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~~-----------------------~l~~~d~lil~GG~~~~~~~l 54 (215)
||+||.++|. +....+.|++.|++++++.... +..++|+||+|||.... ..+
T Consensus 4 kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~-~~l 82 (205)
T 2ab0_A 4 SALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGA-ECF 82 (205)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHH-HHH
T ss_pred EEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccH-HHh
Confidence 8999999995 3345788999999988774311 12468999999996432 234
Q ss_pred HhhCCHHHHHHHHHHcCCcEEEEehHH-HHHHHh
Q 028010 55 AEYHNLFPALREFVKMGKPVWGTCAGL-IFLANK 87 (215)
Q Consensus 55 ~~~~~l~~~i~~~~~~~~PilGIC~G~-QlLa~~ 87 (215)
..+..+.++|+++.++++++.+||.|. ++|+++
T Consensus 83 ~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~a 116 (205)
T 2ab0_A 83 RDSTLLVETVKQFHRSGRIVAAICAAPATVLVPH 116 (205)
T ss_dssp HHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTT
T ss_pred ccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHC
Confidence 344567899999999999999999999 999875
No 43
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=98.89 E-value=5.2e-09 Score=83.00 Aligned_cols=85 Identities=22% Similarity=0.275 Sum_probs=65.6
Q ss_pred EEEEEecCCC----hHHHHHHHHHCCCeEEEECCCC-------------------CC--CCcCEEEEcCCCcchHHHHHh
Q 028010 2 VVGVLALQGS----FNEHIAALKRLGVKGVEIRKPD-------------------QL--QNVSSLIIPGGESTTMARLAE 56 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~~-------------------~l--~~~d~lil~GG~~~~~~~l~~ 56 (215)
||+||.++|. +....+.|++.|++++++.... ++ .++|.|++|||.... ..+..
T Consensus 7 kv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~-~~~~~ 85 (190)
T 4e08_A 7 SALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGEAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGS-NAMGE 85 (190)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSSCEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHH-HHHHH
T ss_pred EEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCcceecCCCcEEECCCCHHHCCcccCCEEEECCCChHH-HHhhh
Confidence 8999999884 3346789999999998874311 11 368999999995322 23434
Q ss_pred hCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 57 ~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
+..+.++|+++.++++++.+||.|.++|+++
T Consensus 86 ~~~~~~~l~~~~~~~k~i~aiC~G~~~La~a 116 (190)
T 4e08_A 86 SSLVGDLLRSQESGGGLIAAICAAPTVLAKH 116 (190)
T ss_dssp CHHHHHHHHHHHHTTCEEEEETTTHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 4567899999999999999999999999986
No 44
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=98.85 E-value=4e-09 Score=85.16 Aligned_cols=86 Identities=17% Similarity=0.126 Sum_probs=63.2
Q ss_pred EEEEEecCCC----hHHHHHHHHHCC-------CeEEEECCC------------------CCCCCcCEEEEcCCCcchHH
Q 028010 2 VVGVLALQGS----FNEHIAALKRLG-------VKGVEIRKP------------------DQLQNVSSLIIPGGESTTMA 52 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G-------~~v~~~~~~------------------~~l~~~d~lil~GG~~~~~~ 52 (215)
||+||.++|. +....+.|+..+ ++++++... ++++++|.||+|||......
T Consensus 10 ~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~~v~~~~G~~v~~d~~~~~~~~~D~livpGg~~~~~~ 89 (209)
T 3er6_A 10 RVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNRPLIGRGGISVQPTAQWQSFDFTNILIIGSIGDPLES 89 (209)
T ss_dssp EEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSSCEEETTTEEEECSSCGGGCSCCSEEEECCCSCHHHH
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCCceecCCCeEEeCCcCccccCCCCEEEECCCCCchhh
Confidence 8999999983 334566776653 677666421 13457999999999653322
Q ss_pred HHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 53 RLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 53 ~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
.+..+..+.++|+++.++++++.+||.|..+|+++
T Consensus 90 ~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~a 124 (209)
T 3er6_A 90 LDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKA 124 (209)
T ss_dssp GGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHc
Confidence 22233467899999999999999999999999987
No 45
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=98.84 E-value=6.3e-09 Score=82.98 Aligned_cols=85 Identities=19% Similarity=0.236 Sum_probs=66.7
Q ss_pred EEEEEecCCC----hHHHHHHHHHCCCeEEEECCC-------------------CCC---CCcCEEEEcCCCcchHHHHH
Q 028010 2 VVGVLALQGS----FNEHIAALKRLGVKGVEIRKP-------------------DQL---QNVSSLIIPGGESTTMARLA 55 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~-------------------~~l---~~~d~lil~GG~~~~~~~l~ 55 (215)
||+||.++|. +....+.|++.|++++++... +++ .++|.||+|||.... ..+.
T Consensus 5 ~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~-~~l~ 83 (197)
T 2rk3_A 5 RALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGA-QNLS 83 (197)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHH-HHHH
T ss_pred EEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhH-HHhh
Confidence 8999999994 345678999999998877421 123 578999999996422 2344
Q ss_pred hhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 56 EYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 56 ~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
.+..+.++|+++.++++++.+||.|.++|+++
T Consensus 84 ~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~a 115 (197)
T 2rk3_A 84 ESAAVKEILKEQENRKGLIATICAGPTALLAH 115 (197)
T ss_dssp HCHHHHHHHHHHHHTTCEEEEETTTHHHHHHT
T ss_pred hCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 44567899999999999999999999999987
No 46
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=98.81 E-value=1.1e-08 Score=80.86 Aligned_cols=86 Identities=22% Similarity=0.358 Sum_probs=64.7
Q ss_pred CEEEEEecCCCh----HHHHHHHHHCCCeEEEECCC-----------------------CCC--CCcCEEEEcCCCcchH
Q 028010 1 MVVGVLALQGSF----NEHIAALKRLGVKGVEIRKP-----------------------DQL--QNVSSLIIPGGESTTM 51 (215)
Q Consensus 1 m~v~il~~~G~~----~s~~~~l~~~G~~v~~~~~~-----------------------~~l--~~~d~lil~GG~~~~~ 51 (215)
|||+||.++|.. ....+.|+..|+++.++... +++ .++|.||+|||....
T Consensus 10 ~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~- 88 (190)
T 2vrn_A 10 KKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPGEIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTVNP- 88 (190)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSSEEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTHHH-
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCccccccccccCCcEEeCCCChhhCChhhCCEEEECCCchhH-
Confidence 489999999853 34678899999988765321 122 368999999996432
Q ss_pred HHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 52 ARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 52 ~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
..+..+..+.++|+++.++++|+.+||.|.++|+++
T Consensus 89 ~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~a 124 (190)
T 2vrn_A 89 DKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSET 124 (190)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHT
T ss_pred HHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHhC
Confidence 233333457899999999999999999999999987
No 47
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=98.78 E-value=2.8e-08 Score=78.61 Aligned_cols=83 Identities=27% Similarity=0.320 Sum_probs=66.1
Q ss_pred EEEEEecCC----ChHHHHHHHHH-CCCeEEEECCC------------------CCCC--CcCEEEEcCCCcchHHHHHh
Q 028010 2 VVGVLALQG----SFNEHIAALKR-LGVKGVEIRKP------------------DQLQ--NVSSLIIPGGESTTMARLAE 56 (215)
Q Consensus 2 ~v~il~~~G----~~~s~~~~l~~-~G~~v~~~~~~------------------~~l~--~~d~lil~GG~~~~~~~l~~ 56 (215)
||+||.++| .+....+.|++ .|+++.++... +++. ++|.||+|||.... +..
T Consensus 3 ~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~---~~~ 79 (188)
T 2fex_A 3 RIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGMPVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLSWE---KGT 79 (188)
T ss_dssp EEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSSCEECTTCCEEECSEEGGGCCTTTCSEEEECCBSHHH---HTC
T ss_pred EEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCCceeeCCCcEEeccccHHHCCcccCCEEEECCCCccc---ccc
Confidence 899999988 45567889998 99998876531 1222 79999999997422 233
Q ss_pred hCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 57 ~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
+..+.++|+++.++++++.+||.|.++|+++
T Consensus 80 ~~~l~~~l~~~~~~~k~i~aiC~G~~~La~a 110 (188)
T 2fex_A 80 AADLGGLVKRFRDRDRLVAGICAAASALGGT 110 (188)
T ss_dssp CCCCHHHHHHHHHTTCEEEEETHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 4678899999999999999999999999987
No 48
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=98.78 E-value=1.3e-08 Score=82.39 Aligned_cols=83 Identities=20% Similarity=0.269 Sum_probs=64.3
Q ss_pred EEEEEecCC----ChHHHHHHHH--------HCCCeEEEECCC------------------CCCC--CcCEEEEcCCCcc
Q 028010 2 VVGVLALQG----SFNEHIAALK--------RLGVKGVEIRKP------------------DQLQ--NVSSLIIPGGEST 49 (215)
Q Consensus 2 ~v~il~~~G----~~~s~~~~l~--------~~G~~v~~~~~~------------------~~l~--~~d~lil~GG~~~ 49 (215)
||+||.++| ++....+.|+ +.++++.++... +++. ++|.||+|||...
T Consensus 7 ~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG~~~ 86 (212)
T 3efe_A 7 KAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKEMITTMGGLRIKPDISLDECTLESKDLLILPGGTTW 86 (212)
T ss_dssp CEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSCCEECTTCCEECCSEEGGGCCCCTTCEEEECCCSCT
T ss_pred EEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCCeEEcCCCCEEecCcCHHHCCccCCCEEEECCCCcc
Confidence 899999988 3556788898 678888776431 1233 7999999998643
Q ss_pred hHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 50 TMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 50 ~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
.. ..+..+.++|+++.++++++.+||.|..+|+++
T Consensus 87 ~~---~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~a 121 (212)
T 3efe_A 87 SE---EIHQPILERIGQALKIGTIVAAICGATDALANM 121 (212)
T ss_dssp TS---GGGHHHHHHHHHHHHHTCEEEEETHHHHHHHHT
T ss_pred cc---ccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHHc
Confidence 21 223457899999999999999999999999987
No 49
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=98.74 E-value=2.1e-08 Score=80.92 Aligned_cols=82 Identities=18% Similarity=0.189 Sum_probs=63.9
Q ss_pred EEEEEecCC----ChHHHHHHHHHC-CCeEEEECCC-----------------CCCC-CcCEEEEcCCCcchHHHHHhhC
Q 028010 2 VVGVLALQG----SFNEHIAALKRL-GVKGVEIRKP-----------------DQLQ-NVSSLIIPGGESTTMARLAEYH 58 (215)
Q Consensus 2 ~v~il~~~G----~~~s~~~~l~~~-G~~v~~~~~~-----------------~~l~-~~d~lil~GG~~~~~~~l~~~~ 58 (215)
||+||.++| ++....+.|++. |+++.++... +++. ++|.|++|||..... .+.
T Consensus 5 kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~V~~~~G~~v~~d~~l~~~~~~~D~livpGG~~~~~----~~~ 80 (206)
T 3f5d_A 5 KALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPIVSSIGGFKTSVDYIIGLEPANFNLLVMIGGDSWSN----DNK 80 (206)
T ss_dssp EEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSEEEBTTSCEEECSEETTSSCSCCSEEEECCBSCCCC----CCH
T ss_pred EEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCCEEecCCcEEecCcChhhCCcCCCEEEEcCCCChhh----cCH
Confidence 899999988 344678889887 8888765421 2233 799999999864321 224
Q ss_pred CHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 59 NLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 59 ~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
.+.++|+++.++++++.+||.|.++|+++
T Consensus 81 ~l~~~l~~~~~~gk~iaaiC~G~~~La~a 109 (206)
T 3f5d_A 81 KLLHFVKTAFQKNIPIAAICGAVDFLAKN 109 (206)
T ss_dssp HHHHHHHHHHHTTCCEEEETHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCEEEEECHHHHHHHHc
Confidence 57899999999999999999999999987
No 50
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=98.73 E-value=1.4e-08 Score=82.10 Aligned_cols=85 Identities=19% Similarity=0.241 Sum_probs=63.9
Q ss_pred CEEEEEecCCC----hHHHHHHHHHC--CCeEEEECCC------------------CCCCCcCEEEEcCCCcchHHHHHh
Q 028010 1 MVVGVLALQGS----FNEHIAALKRL--GVKGVEIRKP------------------DQLQNVSSLIIPGGESTTMARLAE 56 (215)
Q Consensus 1 m~v~il~~~G~----~~s~~~~l~~~--G~~v~~~~~~------------------~~l~~~d~lil~GG~~~~~~~l~~ 56 (215)
|||+||.++|. +....+.|+.. +++++++... ++.+.+|.||+|||... ..+..
T Consensus 5 ~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~~V~~~~G~~v~~d~~~~~~~~~D~livpGG~~~--~~~~~ 82 (211)
T 3mgk_A 5 YRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGGLVESSQKVRVETSLYTRDENIEKILFVPGGSGT--REKVN 82 (211)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCEEEECTTCCEEEEBCCCCCSSSEEEEEECCSTHH--HHHTT
T ss_pred eEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCCeEecCCCcEEEeccchhhCCCCCEEEECCCcch--hhhcC
Confidence 48999999994 33467888877 4777666431 23345899999999642 23333
Q ss_pred hCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 57 ~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
+..+.++|+++.++++++.+||.|..+|+++
T Consensus 83 ~~~~~~~l~~~~~~~k~iaaiC~G~~~La~a 113 (211)
T 3mgk_A 83 DDNFINFIGNMVKESKYIISVCTGSALLSKA 113 (211)
T ss_dssp CHHHHHHHHHHHHHCSEEEECTTHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCEEEEEchHHHHHHhc
Confidence 3457899999999999999999999999986
No 51
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=98.73 E-value=1.8e-08 Score=82.67 Aligned_cols=84 Identities=19% Similarity=0.231 Sum_probs=64.5
Q ss_pred EEEEEecCCC----hHHHHHHHHH-CCCeEEEECCC------------------CCCCCcCEEEEcCCCcchHHHHHhhC
Q 028010 2 VVGVLALQGS----FNEHIAALKR-LGVKGVEIRKP------------------DQLQNVSSLIIPGGESTTMARLAEYH 58 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~-~G~~v~~~~~~------------------~~l~~~d~lil~GG~~~~~~~l~~~~ 58 (215)
||+||.++|- +....+.|++ .|++++++... +++.++|.|++|||... ..+..+.
T Consensus 7 ~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~~V~~~~G~~v~~d~~l~~~~~~D~livpGG~g~--~~~~~~~ 84 (231)
T 3noq_A 7 QIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPGPVVASSGLVLQATTSFADCPPLDVICIPGGTGV--GALMEDP 84 (231)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSEEEECTTSCEEEECEETTTCCCCSEEEECCSTTH--HHHTTCH
T ss_pred EEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCCcEEcCCCCEEecccChhHCCcCCEEEECCCCCh--hhhccCH
Confidence 8999999994 3345778887 67887765421 24467999999999643 2333335
Q ss_pred CHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 59 NLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 59 ~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
.+.++|+++.++++++.+||.|..+|+++
T Consensus 85 ~l~~~lr~~~~~g~~v~aiC~G~~~La~a 113 (231)
T 3noq_A 85 QALAFIRQQAARARYVTSVSTGSLVLGAA 113 (231)
T ss_dssp HHHHHHHHHHTTCSEEEEETTHHHHHHHT
T ss_pred HHHHHHHHHHhcCCEEEEECHHHHHHHHc
Confidence 67899999999999999999999999987
No 52
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=98.70 E-value=1.7e-08 Score=81.35 Aligned_cols=85 Identities=22% Similarity=0.304 Sum_probs=65.3
Q ss_pred EEEEEecCCCh----HHHHHHHHHCCCeEEEECCC-------------------CCC--CCcCEEEEcCCCcchHHHHHh
Q 028010 2 VVGVLALQGSF----NEHIAALKRLGVKGVEIRKP-------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (215)
Q Consensus 2 ~v~il~~~G~~----~s~~~~l~~~G~~v~~~~~~-------------------~~l--~~~d~lil~GG~~~~~~~l~~ 56 (215)
||+||.++|.. ....+.|++.|++++++... +++ .++|.|++|||.... ..+..
T Consensus 11 ~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~-~~l~~ 89 (208)
T 3ot1_A 11 RILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGA-QAFAD 89 (208)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCSEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHH-HHHHT
T ss_pred eEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCcceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHH-HHHhh
Confidence 89999999943 34678999999998876432 112 368999999996422 23444
Q ss_pred hCCHHHHHHHHHHcCCcEEEEehHH-HHHHHh
Q 028010 57 YHNLFPALREFVKMGKPVWGTCAGL-IFLANK 87 (215)
Q Consensus 57 ~~~l~~~i~~~~~~~~PilGIC~G~-QlLa~~ 87 (215)
+..+.++|+++.++++++.+||.|. .+|+++
T Consensus 90 ~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~a 121 (208)
T 3ot1_A 90 STALLALIDAFSQQGKLVAAICATPALVFAKQ 121 (208)
T ss_dssp CHHHHHHHHHHHHTTCEEEEETTHHHHTTTTT
T ss_pred CHHHHHHHHHHHHcCCEEEEEChhHHHHHHHC
Confidence 4567899999999999999999999 888875
No 53
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=98.63 E-value=7.1e-08 Score=84.79 Aligned_cols=84 Identities=26% Similarity=0.413 Sum_probs=66.3
Q ss_pred EEEEEecCCC----hHHHHHHHHHCCCeEEEECCCC----------------------------------C--CCCcCEE
Q 028010 2 VVGVLALQGS----FNEHIAALKRLGVKGVEIRKPD----------------------------------Q--LQNVSSL 41 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~~----------------------------------~--l~~~d~l 41 (215)
||+||.++|. +....+.|++.|++++++.... + ..++|.|
T Consensus 14 kv~ill~dg~e~~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~l 93 (396)
T 3uk7_A 14 TVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKYDGL 93 (396)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGCSEE
T ss_pred eEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccCCEE
Confidence 8999999984 3356789999999998875321 1 1468999
Q ss_pred EEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 42 IIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 42 il~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
++|||... ..+..+..+.++|+++.++++++.+||.|.++|+++
T Consensus 94 ivpGG~~~--~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~a 137 (396)
T 3uk7_A 94 VIPGGRAP--EYLALTASVVELVKEFSRSGKPIASICHGQLILAAA 137 (396)
T ss_dssp EECCBSHH--HHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred EECCCcch--hhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhc
Confidence 99999642 234444567899999999999999999999999987
No 54
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=98.62 E-value=4.9e-08 Score=78.35 Aligned_cols=82 Identities=20% Similarity=0.243 Sum_probs=61.1
Q ss_pred EEEEEecCCC----hHHHHHHHHHCC------CeEEEECCC-----------------CC--CCCcCEEEEcCCCcchHH
Q 028010 2 VVGVLALQGS----FNEHIAALKRLG------VKGVEIRKP-----------------DQ--LQNVSSLIIPGGESTTMA 52 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G------~~v~~~~~~-----------------~~--l~~~d~lil~GG~~~~~~ 52 (215)
||+||.++|. +....+.|+..+ ++++++... ++ ..++|.||+|||......
T Consensus 7 ~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~~v~~~~G~~i~~d~l~~~~~~~~D~livpGG~~~~~~ 86 (202)
T 3gra_A 7 RVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGDRVLSDLGLELVATELSAAALKELDLLVVCGGLRTPLK 86 (202)
T ss_dssp EEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSSEEEBTTSCEEECEECCSGGGTTCSEEEEECCTTCCSC
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCceEcCCCCEEECCCcccccCCCCCEEEEeCCCchhhc
Confidence 8999999994 234566776654 666665321 12 357999999998643211
Q ss_pred HHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 53 RLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 53 ~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
. ..+.++|+++.++++++.+||.|..+|+++
T Consensus 87 ---~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~a 117 (202)
T 3gra_A 87 ---Y-PELDRLLNDCAAHGMALGGLWNGAWFLGRA 117 (202)
T ss_dssp ---C-TTHHHHHHHHHHHTCEEEEETTHHHHHHHH
T ss_pred ---c-HHHHHHHHHHHhhCCEEEEECHHHHHHHHc
Confidence 1 467899999999999999999999999987
No 55
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=98.59 E-value=9.8e-08 Score=79.37 Aligned_cols=85 Identities=18% Similarity=0.262 Sum_probs=63.5
Q ss_pred CEEEEEecCCC----hHHHHHHH-HHCCCeEEEECCC------------------CCC-CCcCEEEEcCCC-cchHHHHH
Q 028010 1 MVVGVLALQGS----FNEHIAAL-KRLGVKGVEIRKP------------------DQL-QNVSSLIIPGGE-STTMARLA 55 (215)
Q Consensus 1 m~v~il~~~G~----~~s~~~~l-~~~G~~v~~~~~~------------------~~l-~~~d~lil~GG~-~~~~~~l~ 55 (215)
|||+||.++|. +....+.| +..|++++++... +++ ..||.||+|||. .. ..+.
T Consensus 24 ~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~~V~~~~G~~i~~d~~l~~~~~~yD~liVPGG~~g~--~~l~ 101 (253)
T 3ewn_A 24 EQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLDPVTSDAGLAIVPTATFGTCPRDLTVLFAPGGTDGT--LAAA 101 (253)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSSCEECTTSCEECCSEETTTSCSSCSEEEECCBSHHH--HHHT
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCCeEEcCCCCEEeCCcCHHHcCCCCCEEEECCCccch--hhhc
Confidence 48999999994 33456778 5668888776421 122 246999999997 32 2333
Q ss_pred hhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 56 EYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 56 ~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
.+..+.++|+++.+++++|.+||.|..+|+++
T Consensus 102 ~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~A 133 (253)
T 3ewn_A 102 SDAETLAFMADRGARAKYITSVCSGSLILGAA 133 (253)
T ss_dssp TCHHHHHHHHHHHTTCSEEEEETTHHHHHHHT
T ss_pred cCHHHHHHHHHHHHcCCEEEEEChHHHHHHHc
Confidence 33567899999999999999999999999987
No 56
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=98.57 E-value=8.9e-08 Score=78.33 Aligned_cols=87 Identities=23% Similarity=0.344 Sum_probs=64.7
Q ss_pred EEEEEec-----CCC----hHHHHHHHHHCCCeEEEECCC------------------------------------CC--
Q 028010 2 VVGVLAL-----QGS----FNEHIAALKRLGVKGVEIRKP------------------------------------DQ-- 34 (215)
Q Consensus 2 ~v~il~~-----~G~----~~s~~~~l~~~G~~v~~~~~~------------------------------------~~-- 34 (215)
||+||.+ +|. +....+.|++.|++++++... ++
T Consensus 8 kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~l~~~~ 87 (232)
T 1vhq_A 8 KIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQAD 87 (232)
T ss_dssp EEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGGCC
T ss_pred eEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCCCcccccccccchhhhhhhhHHHHHhhhcCCCCHHHcC
Confidence 8999999 784 234578899999998876421 11
Q ss_pred CCCcCEEEEcCCCcch--HHHH-------HhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHhh
Q 028010 35 LQNVSSLIIPGGESTT--MARL-------AEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (215)
Q Consensus 35 l~~~d~lil~GG~~~~--~~~l-------~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~ 88 (215)
.+++|+||+|||.... +..+ ..+..+.++|+++.++++++.+||.|.++|++++
T Consensus 88 ~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~aL 150 (232)
T 1vhq_A 88 AAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIF 150 (232)
T ss_dssp GGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHHC
T ss_pred cccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHHh
Confidence 1358999999996531 1111 1234578999999999999999999999999985
No 57
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.57 E-value=8e-08 Score=74.94 Aligned_cols=87 Identities=22% Similarity=0.327 Sum_probs=60.4
Q ss_pred CEEEEEecC---CC-hHHHHHHHHHCCCeEEEECCC-------------------CCC----CCcCEEEEcCC--Ccch-
Q 028010 1 MVVGVLALQ---GS-FNEHIAALKRLGVKGVEIRKP-------------------DQL----QNVSSLIIPGG--ESTT- 50 (215)
Q Consensus 1 m~v~il~~~---G~-~~s~~~~l~~~G~~v~~~~~~-------------------~~l----~~~d~lil~GG--~~~~- 50 (215)
|||+||.++ |. .-+..+.+.+.|++++++... +++ .++|.||+||| .+..
T Consensus 3 ~~v~ill~~~~~g~~~~~~~e~~~~~~~~v~~vs~~~~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG~~~~~~~ 82 (175)
T 3cne_A 3 KKVAVLAVNPVNGCGLFQYLEAFFENGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCGDAVPVFQ 82 (175)
T ss_dssp CEEEEEECSSBCHHHHHHHHHHHHHTTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECCTTGGGGG
T ss_pred cEEEEEEecCcCCCccchhhheeeeCCCEEEEEECCCCCceecCCCeEEEeccCHHHhccCcccCCEEEECCCcCcccHH
Confidence 489999998 61 112233333788988876432 123 46899999999 5222
Q ss_pred -HHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 51 -MARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 51 -~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
+.....+..+.++|+++.++++++.+||.|.++|+++
T Consensus 83 ~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~a 120 (175)
T 3cne_A 83 QYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFT 120 (175)
T ss_dssp GCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHT
T ss_pred HHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 1111123457899999999999999999999999987
No 58
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=98.54 E-value=1.6e-07 Score=87.50 Aligned_cols=88 Identities=19% Similarity=0.192 Sum_probs=68.4
Q ss_pred CEEEEEecCCC-----hHHHHHHHHHCCCeEEEECCC---------CC--CCCcCEEEEcCCCcch------HHHHHhhC
Q 028010 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRKP---------DQ--LQNVSSLIIPGGESTT------MARLAEYH 58 (215)
Q Consensus 1 m~v~il~~~G~-----~~s~~~~l~~~G~~v~~~~~~---------~~--l~~~d~lil~GG~~~~------~~~l~~~~ 58 (215)
+||+||.-+|+ +..+.++|++.|+++.++... ++ ...||+||||||.... .+.|..+.
T Consensus 538 rKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVsp~~g~GvD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~ 617 (688)
T 3ej6_A 538 LRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIAEYLASGVDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAG 617 (688)
T ss_dssp CEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCTTCCEETTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTT
T ss_pred CEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcccCcccCChhcCcEEEECCCcccccccccchhhhccCH
Confidence 38999999883 345689999999999998542 11 2369999999996431 13454445
Q ss_pred CHHHHHHHHHHcCCcEEEEehHHHHHHHhh
Q 028010 59 NLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (215)
Q Consensus 59 ~l~~~i~~~~~~~~PilGIC~G~QlLa~~~ 88 (215)
...++++++.+.+|||.+||.|.++|..+-
T Consensus 618 ~a~~fV~e~~~hgKpIAAIchgp~lL~~AG 647 (688)
T 3ej6_A 618 RPSQILTDGYRWGKPVAAVGSAKKALQSIG 647 (688)
T ss_dssp HHHHHHHHHHHTTCCEEEEGGGHHHHHHTT
T ss_pred HHHHHHHHHHHcCCEEEEeCccHHHHHHcC
Confidence 578999999999999999999999999873
No 59
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=98.53 E-value=2.2e-07 Score=81.63 Aligned_cols=85 Identities=25% Similarity=0.355 Sum_probs=66.4
Q ss_pred CEEEEEecCCC----hHHHHHHHHHCCCeEEEECCC----------------------------------CC--CCCcCE
Q 028010 1 MVVGVLALQGS----FNEHIAALKRLGVKGVEIRKP----------------------------------DQ--LQNVSS 40 (215)
Q Consensus 1 m~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~----------------------------------~~--l~~~d~ 40 (215)
+||+||.++|. +....+.|++.|++++++... ++ ..++|.
T Consensus 206 ~ki~ill~dg~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 285 (396)
T 3uk7_A 206 KRILFLCGDYMEDYEVKVPFQSLQALGCQVDAVCPEKKAGDRCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYDA 285 (396)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHHHTCEEEEECTTCCTTCEECEEEEECCSSSSCEEEECCCEECCSCGGGCCGGGCSE
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHCCCEEEEECCCCCCCcccccccccccccchhhhcCCceeeccCCHHHCCcccCCE
Confidence 38999999984 335678999999998877421 01 236899
Q ss_pred EEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 41 LIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 41 lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
||+|||... ..+..+..+.++|+++.++++++.+||.|.++|+++
T Consensus 286 livpGg~~~--~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~a 330 (396)
T 3uk7_A 286 LVIPGGRAP--EYLALNEHVLNIVKEFMNSEKPVASICHGQQILAAA 330 (396)
T ss_dssp EEECCBSHH--HHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHHT
T ss_pred EEECCCcch--hhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHHc
Confidence 999999742 234444567899999999999999999999999987
No 60
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.53 E-value=2e-07 Score=81.33 Aligned_cols=84 Identities=24% Similarity=0.336 Sum_probs=65.2
Q ss_pred EEEEEecCCC----hHHHHHHHHHCCCeEEEECCC--------------------CCCC--CcCEEEEcCCCcchHHHHH
Q 028010 2 VVGVLALQGS----FNEHIAALKRLGVKGVEIRKP--------------------DQLQ--NVSSLIIPGGESTTMARLA 55 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~--------------------~~l~--~~d~lil~GG~~~~~~~l~ 55 (215)
||+||.++|. +....+.|+..|++++++... ++++ ++|.||+|||... ..+.
T Consensus 12 kV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~g~--~~l~ 89 (365)
T 3fse_A 12 KVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGMAP--DKMR 89 (365)
T ss_dssp EEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSSCCEECTTSCCEECCSEETTTCCGGGCSEEEECCBTHH--HHHT
T ss_pred EEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCCceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCcch--hhcc
Confidence 8999999984 335678999999988776421 1122 5899999999742 2343
Q ss_pred hhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 56 EYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 56 ~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
.+..+.++|+++.++++++.+||.|..+|+++
T Consensus 90 ~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~A 121 (365)
T 3fse_A 90 RNPNTVRFVQEAMEQGKLVAAVCHGPQVLIEG 121 (365)
T ss_dssp TCHHHHHHHHHHHHTTCEEEEETTTHHHHHHT
T ss_pred CCHHHHHHHHHHHHCCCEEEEECHHHHHHHHc
Confidence 44567899999999999999999999999987
No 61
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=98.52 E-value=1.4e-07 Score=77.86 Aligned_cols=87 Identities=22% Similarity=0.269 Sum_probs=64.1
Q ss_pred EEEEEec-----CCC----hHHHHHHHHHCCCeEEEECCC------------------------------------CCC-
Q 028010 2 VVGVLAL-----QGS----FNEHIAALKRLGVKGVEIRKP------------------------------------DQL- 35 (215)
Q Consensus 2 ~v~il~~-----~G~----~~s~~~~l~~~G~~v~~~~~~------------------------------------~~l- 35 (215)
||+|+.. +|. +....+.|++.|++++++... +++
T Consensus 25 kV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~s~g~~v~~d~~~~~~~~~l~dv~ 104 (242)
T 3l3b_A 25 NSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIEQIR 104 (242)
T ss_dssp EEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGGGCC
T ss_pred EEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCcccccccccCccccccCCeEEecchhccccCCChHHCC
Confidence 8999987 774 224578999999998876421 111
Q ss_pred -CCcCEEEEcCCCcch--HHH--------HHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHhh
Q 028010 36 -QNVSSLIIPGGESTT--MAR--------LAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (215)
Q Consensus 36 -~~~d~lil~GG~~~~--~~~--------l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~ 88 (215)
+++|+||+|||.... +.. +..+..+.++|+++.++++|+.+||.|.++|+++.
T Consensus 105 ~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag 168 (242)
T 3l3b_A 105 VEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALL 168 (242)
T ss_dssp GGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred cccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhC
Confidence 368999999996432 111 12224578899999999999999999999999874
No 62
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=98.50 E-value=9.4e-08 Score=89.56 Aligned_cols=85 Identities=25% Similarity=0.193 Sum_probs=66.5
Q ss_pred CEEEEEecCCC----hHHHHHHHHHCCCeEEEECCC------------------CCC--CCcCEEEEcCCCcchHHHHHh
Q 028010 1 MVVGVLALQGS----FNEHIAALKRLGVKGVEIRKP------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (215)
Q Consensus 1 m~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~~------------------~~l--~~~d~lil~GG~~~~~~~l~~ 56 (215)
+||+||..+|. +..+.++|++.|+++.++... ++. ..||+|||||| .. ..|..
T Consensus 601 rKVaILlaDGfEe~El~~pvdaLr~AG~~V~vVS~~~g~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG-g~--~~Lr~ 677 (753)
T 3ttv_A 601 RVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCG-NI--ADIAD 677 (753)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSSEEECTTSCEEECCEETTTSCGGGCSEEEECCS-CG--GGTTT
T ss_pred CEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEEcCCCeEEeCCCCEEecccchhhCCCcCCCEEEECCC-Ch--HHhhh
Confidence 48999999983 446789999999998887531 112 24899999999 32 23444
Q ss_pred hCCHHHHHHHHHHcCCcEEEEehHHHHHHHhh
Q 028010 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (215)
Q Consensus 57 ~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~ 88 (215)
+..+.++|+++.+.+|||.+||.|.++|+++.
T Consensus 678 d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa~AG 709 (753)
T 3ttv_A 678 NGDANYYLMEAYKHLKPIALAGDARKFKATIK 709 (753)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEGGGGGGGGGGT
T ss_pred CHHHHHHHHHHHhcCCeEEEECchHHHHHHcC
Confidence 45578999999999999999999999999873
No 63
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=98.46 E-value=2.7e-07 Score=74.74 Aligned_cols=85 Identities=19% Similarity=0.275 Sum_probs=64.6
Q ss_pred EEEEEec----------CCC----hHHHHHHHHHCCCeEEEECCC-------------------------------CCC-
Q 028010 2 VVGVLAL----------QGS----FNEHIAALKRLGVKGVEIRKP-------------------------------DQL- 35 (215)
Q Consensus 2 ~v~il~~----------~G~----~~s~~~~l~~~G~~v~~~~~~-------------------------------~~l- 35 (215)
||+|+.. +|. +....+.|++.|++++++... +++
T Consensus 7 kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 86 (224)
T 1u9c_A 7 RVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGGEVPLDPRSINEKDPSWAEAEAALKHTARLSKDD 86 (224)
T ss_dssp EEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCBCCCBCGGGSSSCCGGGHHHHHHTTSBEECCGGG
T ss_pred eEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCCccccCccccccHHHHHhhhhHhhcCCCChHHcC
Confidence 8999998 663 334678899999998876421 111
Q ss_pred -CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 36 -QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 36 -~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
.++|+||+|||.... ..+..+..+.++|+++.+++++|.+||.|.++|+.+
T Consensus 87 ~~~~D~livpGG~~~~-~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La~a 138 (224)
T 1u9c_A 87 AHGFDAIFLPGGHGTM-FDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNA 138 (224)
T ss_dssp GSSCSEEEECCCTTHH-HHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTC
T ss_pred hhhCCEEEECCCcchH-HHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHHHc
Confidence 368999999997532 223333457899999999999999999999999987
No 64
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=98.42 E-value=3.8e-07 Score=72.68 Aligned_cols=85 Identities=21% Similarity=0.292 Sum_probs=60.1
Q ss_pred CEEEEEecCCC----hHHHHHHHHHCCCeEEEECC--C-------------------CCC-------CCcCEEEEcCCCc
Q 028010 1 MVVGVLALQGS----FNEHIAALKRLGVKGVEIRK--P-------------------DQL-------QNVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~G~----~~s~~~~l~~~G~~v~~~~~--~-------------------~~l-------~~~d~lil~GG~~ 48 (215)
|||+||.++|- +....+.|++.|+++.++.. . +++ ++||+||+|||..
T Consensus 5 ~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG~~ 84 (194)
T 4gdh_A 5 VKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGGGL 84 (194)
T ss_dssp CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCCHH
T ss_pred CEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEECCCch
Confidence 49999999994 33567889999988765421 0 011 2379999999954
Q ss_pred chHHHHHhhCCHHHHHHHHHHc-CCcEEEEehHHHHHHH
Q 028010 49 TTMARLAEYHNLFPALREFVKM-GKPVWGTCAGLIFLAN 86 (215)
Q Consensus 49 ~~~~~l~~~~~l~~~i~~~~~~-~~PilGIC~G~QlLa~ 86 (215)
.. ..+..+..+.++|+++.++ ++++..||.|..++..
T Consensus 85 ~~-~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l~~a 122 (194)
T 4gdh_A 85 GA-KTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKT 122 (194)
T ss_dssp HH-HHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHHHHH
T ss_pred hH-hHhhhCHHHHHHHHHhhhcCCceEEeecccccchhh
Confidence 32 3454445678899998764 7999999999855443
No 65
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=98.33 E-value=1.2e-06 Score=82.44 Aligned_cols=87 Identities=18% Similarity=0.200 Sum_probs=66.6
Q ss_pred CEEEEEecCCCh----HHHHHHHHHCCCeEEEECCC------------------CCC--CCcCEEEEcCCCcchHHHHHh
Q 028010 1 MVVGVLALQGSF----NEHIAALKRLGVKGVEIRKP------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (215)
Q Consensus 1 m~v~il~~~G~~----~s~~~~l~~~G~~v~~~~~~------------------~~l--~~~d~lil~GG~~~~~~~l~~ 56 (215)
|||+||.++|.. ....+.|+..|++++++... +++ ..+|+||+|||... ...+..
T Consensus 535 rkVaILl~dGfe~~El~~p~dvL~~AG~~V~ivS~~gg~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~-~~~l~~ 613 (715)
T 1sy7_A 535 RRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRSKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKA-AETLSK 613 (715)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSSCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHH-HHHHHT
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEEECCCCceecCCCceEecccccccCCcccCCEEEEcCCccc-Hhhhcc
Confidence 489999999843 34678899999999887531 112 35899999999532 223433
Q ss_pred hCCHHHHHHHHHHcCCcEEEEehHHHHHHHhh
Q 028010 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (215)
Q Consensus 57 ~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~ 88 (215)
+..+.++|+++.+++++|.+||.|..+|+.++
T Consensus 614 ~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~Al 645 (715)
T 1sy7_A 614 NGRALHWIREAFGHLKAIGATGEAVDLVAKAI 645 (715)
T ss_dssp CHHHHHHHHHHHHTTCEEEEETTHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCEEEEECHHHHHHHHcc
Confidence 34578999999999999999999999999983
No 66
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=98.29 E-value=1.2e-06 Score=72.32 Aligned_cols=50 Identities=12% Similarity=0.236 Sum_probs=41.5
Q ss_pred CcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 37 NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 37 ~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
+||+|++|||... +..+..+..+.++|+++.++++||.+||.|..+|+.+
T Consensus 98 ~yD~l~vpGG~~~-~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a 147 (244)
T 3kkl_A 98 DYKVFFASAGHGA-LFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGL 147 (244)
T ss_dssp GCSEEEECCSTTH-HHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTC
T ss_pred hCCEEEEcCCCch-hhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 5899999999753 2334444567899999999999999999999999876
No 67
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=98.27 E-value=1.5e-06 Score=71.94 Aligned_cols=50 Identities=16% Similarity=0.309 Sum_probs=41.6
Q ss_pred CcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 37 NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 37 ~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
+||+|++|||... +..+..+..+.++|+++.++++||.+||.|..+|+.+
T Consensus 105 ~yD~l~ipGG~g~-~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~a 154 (247)
T 3n7t_A 105 DYGLMFVCGGHGA-LYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGI 154 (247)
T ss_dssp GCSEEEECCSTTH-HHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGC
T ss_pred hCCEEEEeCCCch-hhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHh
Confidence 5899999999743 2344444567899999999999999999999999886
No 68
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=98.27 E-value=8.7e-07 Score=82.64 Aligned_cols=87 Identities=20% Similarity=0.218 Sum_probs=66.8
Q ss_pred CEEEEEec--CCC----hHHHHHHHHHCCCeEEEECCC---------C--CCCCcCEEEEcCCCcc--------------
Q 028010 1 MVVGVLAL--QGS----FNEHIAALKRLGVKGVEIRKP---------D--QLQNVSSLIIPGGEST-------------- 49 (215)
Q Consensus 1 m~v~il~~--~G~----~~s~~~~l~~~G~~v~~~~~~---------~--~l~~~d~lil~GG~~~-------------- 49 (215)
+||+||.- .|. ...+.++|++.|++++++... + +...||+||||||...
T Consensus 530 ~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vVs~~~g~~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~ 609 (688)
T 2iuf_A 530 LKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVVAERXANNVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSAG 609 (688)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEEESSCCTTCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCTT
T ss_pred CEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEEeccCCcccccchhcCCccccCeEEecCCCcccccccccccccccc
Confidence 38999988 663 346789999999999988642 1 1236999999999532
Q ss_pred -hHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHh
Q 028010 50 -TMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (215)
Q Consensus 50 -~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~ 87 (215)
..+.|..+....++|+++.+.+|||.+||.|.++|..+
T Consensus 610 ~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~~a 648 (688)
T 2iuf_A 610 SGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALESG 648 (688)
T ss_dssp SCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHHHT
T ss_pred cchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHHHc
Confidence 02344444557899999999999999999999999876
No 69
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=98.23 E-value=1.6e-06 Score=71.26 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=41.4
Q ss_pred CcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHhh
Q 028010 37 NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (215)
Q Consensus 37 ~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~ 88 (215)
++|+||+|||.... ..+..+..+.++|+++.+++++|.+||.|..+|+.+-
T Consensus 98 ~~D~livpGG~~~~-~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~ag 148 (243)
T 1rw7_A 98 DYQIFFASAGHGTL-FDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLT 148 (243)
T ss_dssp GEEEEEECCSTTHH-HHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCB
T ss_pred hCcEEEECCCCCch-hhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHHhcC
Confidence 58999999997532 2333345678999999999999999999999998873
No 70
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=98.15 E-value=2.9e-06 Score=71.79 Aligned_cols=53 Identities=21% Similarity=0.305 Sum_probs=41.3
Q ss_pred CCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHHHHHHHhh
Q 028010 35 LQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (215)
Q Consensus 35 l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~QlLa~~~ 88 (215)
.+++|+||+|||.... ..+..+..+.++|+++.+++++|.+||.|..+|+.+.
T Consensus 143 ~~~yD~livPGG~g~~-~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a~ 195 (291)
T 1n57_A 143 DSEYAAIFVPGGHGAL-IGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALR 195 (291)
T ss_dssp TCSEEEEEECCSGGGG-SSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGGT
T ss_pred cccCCEEEecCCcchh-hhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhhc
Confidence 3578999999995432 1233334578999999999999999999999888763
No 71
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=98.14 E-value=8.4e-07 Score=72.94 Aligned_cols=82 Identities=17% Similarity=0.222 Sum_probs=56.9
Q ss_pred EEEEEecCCC----hHHHHHHHHHCC--CeEEEECCC-----------------CCCCCcCEEEEcCC-CcchHHHHHhh
Q 028010 2 VVGVLALQGS----FNEHIAALKRLG--VKGVEIRKP-----------------DQLQNVSSLIIPGG-ESTTMARLAEY 57 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G--~~v~~~~~~-----------------~~l~~~d~lil~GG-~~~~~~~l~~~ 57 (215)
||+||.++|. +....+.|+..+ +++.++... ++..++|.||+||| ... ..+..+
T Consensus 22 kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs~~~~V~ss~G~~v~~d~~l~~~~~~D~liVPGG~~g~--~~l~~~ 99 (236)
T 3bhn_A 22 KVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILGTKPEHHSQLGMTVKTDGHVSEVKEQDVVLITSGYRGI--PAALQD 99 (236)
T ss_dssp EEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEESSSEEEBTTCCEEECSEEGGGGGGCSEEEECCCTTHH--HHHHTC
T ss_pred EEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEECCCcEEecCCcEEecCcccccccCCCEEEEcCCccCH--hhhccC
Confidence 8999999994 334567787765 677665411 12346899999999 432 223333
Q ss_pred CCHHHHHHHHHHcCC-cEEEEehHHHHHHHh
Q 028010 58 HNLFPALREFVKMGK-PVWGTCAGLIFLANK 87 (215)
Q Consensus 58 ~~l~~~i~~~~~~~~-PilGIC~G~QlLa~~ 87 (215)
..+.++| ..++++ ++.+||.|..+|+++
T Consensus 100 ~~l~~~L--~~~~~~~~IaaIC~G~~lLa~A 128 (236)
T 3bhn_A 100 ENFMSAL--KLDPSRQLIGSICAGSFVLHEL 128 (236)
T ss_dssp HHHHHHC--CCCTTTCEEEEETTHHHHHHHT
T ss_pred HHHHHHH--HhCCCCCEEEEEcHHHHHHHHc
Confidence 4566777 445566 999999999999987
No 72
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=97.77 E-value=1.6e-05 Score=67.27 Aligned_cols=105 Identities=16% Similarity=0.247 Sum_probs=72.6
Q ss_pred EEEEEec-CCCh----HHHHHHHHHCCC-eEEEECCC--C---------CCCCcCEEEEcCCCcchHHHHHhhCCHHHHH
Q 028010 2 VVGVLAL-QGSF----NEHIAALKRLGV-KGVEIRKP--D---------QLQNVSSLIIPGGESTTMARLAEYHNLFPAL 64 (215)
Q Consensus 2 ~v~il~~-~G~~----~s~~~~l~~~G~-~v~~~~~~--~---------~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i 64 (215)
||+++-. .+.. ..+.++|+++|+ ++..+... + .+.++|+|+++||....+-.+-...++.+.|
T Consensus 58 ~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L 137 (291)
T 3en0_A 58 IIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRI 137 (291)
T ss_dssp EEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHH
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHH
Confidence 6778754 3332 246678999999 67666431 1 2457999999999765433333347889999
Q ss_pred HHHHHcC-CcEEEEehHHHHHHHhhc--cC---CCC-----CccccceeeeEE
Q 028010 65 REFVKMG-KPVWGTCAGLIFLANKAV--GQ---KLG-----GQELVGGLDCTV 106 (215)
Q Consensus 65 ~~~~~~~-~PilGIC~G~QlLa~~~~--~~---~~~-----~~~~lG~~~~~v 106 (215)
++++++| .|+.|.|+|+.+++...- +. .+. ..++||+++..+
T Consensus 138 ~~~~~~G~~~~~GtSAGA~i~~~~m~~~g~s~~~p~~~~v~~~~GLGll~~~~ 190 (291)
T 3en0_A 138 RQRVHNGEISLAGTSAGAAVMGHHMIAGGSSGEWPNRALVDMAVGLGIVPEIV 190 (291)
T ss_dssp HHHHHTTSSEEEEETHHHHTTSSEEEEEECCSSCCCGGGEEEEECCCSSTTEE
T ss_pred HHHHHCCCeEEEEeCHHHHhhhHheEcCCCCccCcccCceeecCcccccCCCc
Confidence 9999999 999999999999987632 11 010 135788888753
No 73
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=95.70 E-value=0.026 Score=46.34 Aligned_cols=70 Identities=20% Similarity=0.210 Sum_probs=48.4
Q ss_pred cCCChHHHHHHHHHCCCeEEEEC-------CC---CCCCCcCEEEEcCCCcchHH-----HHH--hhCCHHHHHHHHHHc
Q 028010 8 LQGSFNEHIAALKRLGVKGVEIR-------KP---DQLQNVSSLIIPGGESTTMA-----RLA--EYHNLFPALREFVKM 70 (215)
Q Consensus 8 ~~G~~~s~~~~l~~~G~~v~~~~-------~~---~~l~~~d~lil~GG~~~~~~-----~l~--~~~~l~~~i~~~~~~ 70 (215)
+.+....+.++|+..+++++.+. .+ +.+.+||.||+.+-...... +.. ......+.|++++++
T Consensus 38 ~~~~~~~l~~aL~~~~~~v~~~~~~~~~~~fp~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~~ 117 (256)
T 2gk3_A 38 YEEGATWLLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKN 117 (256)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECHHHHHHCCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHhcCceEEEEecccchhhCCcChhHHhcCCEEEEeCCchhhcccccccccccccChHHHHHHHHHHHh
Confidence 43455668899999999999883 23 24568999999874322111 000 003457899999999
Q ss_pred CCcEEEE
Q 028010 71 GKPVWGT 77 (215)
Q Consensus 71 ~~PilGI 77 (215)
|..+++|
T Consensus 118 GGgll~i 124 (256)
T 2gk3_A 118 GGGLLMI 124 (256)
T ss_dssp TCEEEEE
T ss_pred CCEEEEE
Confidence 9999999
No 74
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=94.13 E-value=0.047 Score=45.59 Aligned_cols=69 Identities=26% Similarity=0.441 Sum_probs=48.9
Q ss_pred CEEEEEecCCC-hHHHHHHHHHCCCeEEEECCC-CCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEe
Q 028010 1 MVVGVLALQGS-FNEHIAALKRLGVKGVEIRKP-DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (215)
Q Consensus 1 m~v~il~~~G~-~~s~~~~l~~~G~~v~~~~~~-~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC 78 (215)
|||+|+.-.+. ...+.+.|++.|+++.+.... +.+.++|.+|.-||-++.... .+.+... +|++||=
T Consensus 30 mki~iv~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~DlvIvlGGDGT~L~a----------a~~~~~~-~PilGIN 98 (278)
T 1z0s_A 30 MRAAVVYKTDGHVKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGGDGTILRI----------LQKLKRC-PPIFGIN 98 (278)
T ss_dssp CEEEEEESSSTTHHHHHHHHHHTTCEEEEESSCCGGGGGSSEEEEEECHHHHHHH----------HTTCSSC-CCEEEEE
T ss_pred eEEEEEeCCcHHHHHHHHHHHHCCCEEEEccccccccCCCCEEEEECCCHHHHHH----------HHHhCCC-CcEEEEC
Confidence 79999876554 556888999999998876542 344678999999996654222 2222224 9999998
Q ss_pred hH
Q 028010 79 AG 80 (215)
Q Consensus 79 ~G 80 (215)
.|
T Consensus 99 ~G 100 (278)
T 1z0s_A 99 TG 100 (278)
T ss_dssp CS
T ss_pred CC
Confidence 77
No 75
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=92.65 E-value=0.33 Score=40.39 Aligned_cols=61 Identities=13% Similarity=0.033 Sum_probs=42.2
Q ss_pred HHHHHHHCC-CeEEEECCC----------CCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHH
Q 028010 15 HIAALKRLG-VKGVEIRKP----------DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGL 81 (215)
Q Consensus 15 ~~~~l~~~G-~~v~~~~~~----------~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~ 81 (215)
+.+.|++.| ++|++..++ +.|.++|.||+--... ... ....+.|++++++|++++|+..+.
T Consensus 25 l~~~l~~~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~~~~-~l~-----~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 25 LKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDYNGD-SWP-----EETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp HHHHHHHTTSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECCCSS-CCC-----HHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred HHHHHHhcCCEEEEEEeCCccccchhHHhhhhhcCCEEEEeCCCC-cCC-----HHHHHHHHHHHHcCCCEEEEeccc
Confidence 456778888 899887653 3578999999733211 111 112467888999999999999754
No 76
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=90.44 E-value=0.33 Score=40.01 Aligned_cols=64 Identities=16% Similarity=0.151 Sum_probs=42.3
Q ss_pred CEEEEEecCCC-----hHHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHc--CCc
Q 028010 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKM--GKP 73 (215)
Q Consensus 1 m~v~il~~~G~-----~~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~--~~P 73 (215)
|||+|+..+.. ...+.+.|++.|+++ +..++|.+|.-||-++... ..+..... ++|
T Consensus 1 mki~ii~n~~~~~~~~~~~l~~~l~~~g~~v-------~~~~~D~vv~lGGDGT~l~----------aa~~~~~~~~~~P 63 (272)
T 2i2c_A 1 MKYMITSKGDEKSDLLRLNMIAGFGEYDMEY-------DDVEPEIVISIGGDGTFLS----------AFHQYEERLDEIA 63 (272)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTSSCEE-------CSSSCSEEEEEESHHHHHH----------HHHHTGGGTTTCE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEe-------CCCCCCEEEEEcCcHHHHH----------HHHHHhhcCCCCC
Confidence 89999877432 113556678889887 1356899999999665432 22333333 899
Q ss_pred EEEEehHH
Q 028010 74 VWGTCAGL 81 (215)
Q Consensus 74 ilGIC~G~ 81 (215)
++||=.|.
T Consensus 64 ilGIn~G~ 71 (272)
T 2i2c_A 64 FIGIHTGH 71 (272)
T ss_dssp EEEEESSS
T ss_pred EEEEeCCC
Confidence 99997663
No 77
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=90.04 E-value=0.73 Score=37.88 Aligned_cols=70 Identities=13% Similarity=0.002 Sum_probs=46.2
Q ss_pred EEEEEecCC----ChHHHHHHHHHCCCeEEEECCC------CCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcC
Q 028010 2 VVGVLALQG----SFNEHIAALKRLGVKGVEIRKP------DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMG 71 (215)
Q Consensus 2 ~v~il~~~G----~~~s~~~~l~~~G~~v~~~~~~------~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~ 71 (215)
||.|+. .. .-..+.++|+..|++|+++... ++|.+||.||++--... .+. ....+.|++++++|
T Consensus 6 ~vLiV~-g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~~L~~yDvIIl~d~~~~---~l~--~~~~~~L~~yV~~G 79 (259)
T 3rht_A 6 RVLYCG-DTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDVGELLAKQDLVILSDYPAE---RMT--AQAIDQLVTMVKAG 79 (259)
T ss_dssp CEEEEE-SSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCSSHHHHTCSEEEEESCCGG---GBC--HHHHHHHHHHHHTT
T ss_pred eEEEEC-CCCchhHHHHHHHHHHhCCceEEEecccccccChhHHhcCCEEEEcCCccc---cCC--HHHHHHHHHHHHhC
Confidence 677774 22 2234677999999999988753 23568999999742211 111 12357889999988
Q ss_pred CcEEEE
Q 028010 72 KPVWGT 77 (215)
Q Consensus 72 ~PilGI 77 (215)
.-++.+
T Consensus 80 GgLi~~ 85 (259)
T 3rht_A 80 CGLVML 85 (259)
T ss_dssp CEEEEE
T ss_pred CeEEEe
Confidence 777666
No 78
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=87.97 E-value=0.66 Score=43.19 Aligned_cols=63 Identities=16% Similarity=0.141 Sum_probs=47.2
Q ss_pred HHHHHHHCCCeEEEECC-----CCCCCCcCEEEEcC-CC---cchHHHHHhhCCHHHHHHHHHHcCCcEEEEeh
Q 028010 15 HIAALKRLGVKGVEIRK-----PDQLQNVSSLIIPG-GE---STTMARLAEYHNLFPALREFVKMGKPVWGTCA 79 (215)
Q Consensus 15 ~~~~l~~~G~~v~~~~~-----~~~l~~~d~lil~G-G~---~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~ 79 (215)
+.++|..++++++.+.. .+.++++|.||.+| .. +...-+.. ....+.||+++.+|.-++||.-
T Consensus 473 ilEALsg~~~dV~FIsfdDI~e~e~L~d~DVIIn~G~A~TalSgg~~W~~--p~~~~aLR~fV~~GGgLIgVGe 544 (759)
T 2zuv_A 473 ILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDVWTN--PKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp HHHHHHTSSSEEEEEEHHHHHHHCCCTTCCEEEEEECTTSTTTCGGGGGC--HHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHhcCCCceEEecHHHhccccccccCCEEEecCcchhcccCccccCC--HHHHHHHHHHHHcCCcEEEeCC
Confidence 78899999999999863 15578999999999 32 22212222 3457899999999999999873
No 79
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=86.86 E-value=1.6 Score=31.13 Aligned_cols=64 Identities=13% Similarity=0.088 Sum_probs=41.9
Q ss_pred EEecCCCh--HHHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcc-hHHHHHhhCCHHHHHHHHHHcCCcEEEEe
Q 028010 5 VLALQGSF--NEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGEST-TMARLAEYHNLFPALREFVKMGKPVWGTC 78 (215)
Q Consensus 5 il~~~G~~--~s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~-~~~~l~~~~~l~~~i~~~~~~~~PilGIC 78 (215)
++.+..+. ..+...|...|++++- +.+..+|.+|+.-|..+ ..++.. ..|+.+.+.|+|++||=
T Consensus 8 FISh~~~d~~~~L~~~l~~~~f~~~~----~~I~~~~~vIvL~G~~t~~s~wv~------~EI~~A~~~gkpIigV~ 74 (111)
T 1eiw_A 8 YITEGEVEDYRVFLERLEQSGLEWRP----ATPEDADAVIVLAGLWGTRRDEIL------GAVDLARKSSKPIITVR 74 (111)
T ss_dssp EECCCCSHHHHHHHHHHHHHCSCEEE----CCSSSCSEEEEEGGGTTTSHHHHH------HHHHHHTTTTCCEEEEC
T ss_pred EEecccHhHHHHHHHHHhCCCCeeec----CccccCCEEEEEeCCCcCCChHHH------HHHHHHHHcCCCEEEEE
Confidence 34444433 3445555556787775 77889999888776543 334553 45667777899999983
No 80
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=86.63 E-value=2.2 Score=39.76 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=45.9
Q ss_pred HHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEe
Q 028010 14 EHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (215)
Q Consensus 14 s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC 78 (215)
...++|.++|+.+.++...+++++|+.||+|.-.... ..+.+.|++++++|.-++..+
T Consensus 429 ~~y~aL~~~gi~vD~v~~~~dL~~Yklvv~P~~~~~~-------~~~~~~L~~yV~~GG~lv~t~ 486 (675)
T 3tty_A 429 KYYDALYKQNIQTDMISVEEDLSKYKVVIAPVMYMVK-------PGFAERVERFVAQGGTFVTTF 486 (675)
T ss_dssp HHHHHHHTTTCCEEEECTTSCCTTCSEEEETTCCBCC-------TTHHHHHHHHHHTTCEEEEET
T ss_pred HHHHHHHHcCceEEEecCcCCcccCCEEEEeccEecC-------HHHHHHHHHHHhcCCEEEEEc
Confidence 5678999999999999988899999999999854321 234677889999887666554
No 81
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=86.42 E-value=0.078 Score=40.26 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=27.2
Q ss_pred CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEeh
Q 028010 36 QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCA 79 (215)
Q Consensus 36 ~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~ 79 (215)
.+.|.||+.||-...--.... ....++|.+..+.++.+.|||+
T Consensus 83 ~~~D~vVllGGLAMPk~~v~~-e~v~~li~ki~~~~~kiiGvCF 125 (157)
T 2r47_A 83 GNVDVLVLLGGLSMPGIGSDI-EDVKKLVEDALEEGGELMGLCY 125 (157)
T ss_dssp CCEEEEEEEGGGGSTTTSCCH-HHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEEeccccCCCCCCCH-HHHHHHHHHhhcCCCCEEEEEh
Confidence 589999999995421101100 1234667776666777999997
No 82
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=86.22 E-value=1.6 Score=36.41 Aligned_cols=69 Identities=16% Similarity=0.132 Sum_probs=43.1
Q ss_pred EEEEEecCCC------hHHHHHHHHHCCCeEEEECCC-C---------------------------CCCCcCEEEEcCCC
Q 028010 2 VVGVLALQGS------FNEHIAALKRLGVKGVEIRKP-D---------------------------QLQNVSSLIIPGGE 47 (215)
Q Consensus 2 ~v~il~~~G~------~~s~~~~l~~~G~~v~~~~~~-~---------------------------~l~~~d~lil~GG~ 47 (215)
||+|+...+. ...+.+.|++.|+++.+.... + ...++|.+|.-||-
T Consensus 6 ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~~GGD 85 (307)
T 1u0t_A 6 SVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGGD 85 (307)
T ss_dssp EEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEEECH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccccccccccccccCCCEEEEEeCC
Confidence 7898887553 235678899999987654211 0 11357999999986
Q ss_pred cchHHHHHhhCCHHHHHHHHHHcCCcEEEEehH
Q 028010 48 STTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (215)
Q Consensus 48 ~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G 80 (215)
++... .++.+...++|++||=.|
T Consensus 86 GT~l~----------a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 86 GTFLR----------AAELARNASIPVLGVNLG 108 (307)
T ss_dssp HHHHH----------HHHHHHHHTCCEEEEECS
T ss_pred HHHHH----------HHHHhccCCCCEEEEeCC
Confidence 65432 223333457999999765
No 83
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=85.65 E-value=1.5 Score=35.79 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=41.5
Q ss_pred HHHHHHCCCeEEEEC--CC------CCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehH
Q 028010 16 IAALKRLGVKGVEIR--KP------DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (215)
Q Consensus 16 ~~~l~~~G~~v~~~~--~~------~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G 80 (215)
.+.|+..|++|+.+. +. +.|+++|.||+-|.... ..+. ....+.+++++++|+.++|+=.|
T Consensus 38 ~~~L~~~gf~V~~~t~dd~~~~~~~~~L~~~DvvV~~~~~~~--~~l~--~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 38 ASYLAEAGFDAATAVLDEPEHGLTDEVLDRCDVLVWWGHIAH--DEVK--DEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp HHHHHHTTCEEEEEESSSGGGGCCHHHHHTCSEEEEECSSCG--GGSC--HHHHHHHHHHHHTTCEEEEEGGG
T ss_pred HHHHhhCCcEEEEEeccCccccCCHhHHhcCCEEEEecCCCC--CcCC--HHHHHHHHHHHHcCCCEEEEccc
Confidence 677888999998865 32 13578999998542111 0111 12356788999999999999665
No 84
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=81.86 E-value=1.3 Score=34.07 Aligned_cols=48 Identities=17% Similarity=0.151 Sum_probs=32.2
Q ss_pred CEEEEEecC-----C-----ChHHHHHHHHHCCCeEEE---ECCC-CC--------CCCcCEEEEcCCCc
Q 028010 1 MVVGVLALQ-----G-----SFNEHIAALKRLGVKGVE---IRKP-DQ--------LQNVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~-----G-----~~~s~~~~l~~~G~~v~~---~~~~-~~--------l~~~d~lil~GG~~ 48 (215)
|||+||... | |-..+.+.|++.|+++.. +.+. +. ++++|.||.+||.+
T Consensus 4 ~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g 73 (172)
T 3kbq_A 4 KNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLG 73 (172)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCS
T ss_pred CEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCc
Confidence 689998853 3 222467889999998754 3332 11 23589999999854
No 85
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=80.89 E-value=1.3 Score=36.48 Aligned_cols=69 Identities=16% Similarity=0.213 Sum_probs=44.0
Q ss_pred EEEEEecCCC------hHHHHHHHHHCCCeEEEECCC---------C-----C-CCCcCEEEEcCCCcchHHHHHhhCCH
Q 028010 2 VVGVLALQGS------FNEHIAALKRLGVKGVEIRKP---------D-----Q-LQNVSSLIIPGGESTTMARLAEYHNL 60 (215)
Q Consensus 2 ~v~il~~~G~------~~s~~~~l~~~G~~v~~~~~~---------~-----~-l~~~d~lil~GG~~~~~~~l~~~~~l 60 (215)
||+|+...+. ...+.+.|++.|+++.+.... . . ..++|.||..||-++..
T Consensus 7 ki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~GGDGT~l--------- 77 (292)
T 2an1_A 7 CIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNML--------- 77 (292)
T ss_dssp EEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSCHHHHH---------
T ss_pred EEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhcccccccccchhhcccCCCEEEEEcCcHHHH---------
Confidence 7888876442 335678899999998765310 0 0 12479999999966543
Q ss_pred HHHHHHHHHcCCcEEEEehH
Q 028010 61 FPALREFVKMGKPVWGTCAG 80 (215)
Q Consensus 61 ~~~i~~~~~~~~PilGIC~G 80 (215)
+.++.+...++|++||=.|
T Consensus 78 -~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 78 -GAARTLARYDINVIGINRG 96 (292)
T ss_dssp -HHHHHHTTSSCEEEEBCSS
T ss_pred -HHHHHhhcCCCCEEEEECC
Confidence 2333444467999999655
No 86
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=80.68 E-value=7.5 Score=29.33 Aligned_cols=76 Identities=18% Similarity=0.189 Sum_probs=45.2
Q ss_pred CEEEEEecCCChH-------HHHHHHHHCC-C---eEEEECCCCC------------CCCcCEEEEcC----CCcchHHH
Q 028010 1 MVVGVLALQGSFN-------EHIAALKRLG-V---KGVEIRKPDQ------------LQNVSSLIIPG----GESTTMAR 53 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~~G-~---~v~~~~~~~~------------l~~~d~lil~G----G~~~~~~~ 53 (215)
+||+|+.-+=|.. ...+.|++.| + ++.+++.|-. -.+||++|..| |....++.
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~ 92 (156)
T 3nq4_A 13 ARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGGTAHFEY 92 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHHHCSCSEEEEEEEEECCSSTHHHH
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHH
Confidence 4788888655533 3567888999 6 5666654421 14699999888 44444444
Q ss_pred HHhhCCHHHHHHHHHHcCCcE-EEE
Q 028010 54 LAEYHNLFPALREFVKMGKPV-WGT 77 (215)
Q Consensus 54 l~~~~~l~~~i~~~~~~~~Pi-lGI 77 (215)
...+ -..-+.+-.++.++|+ +||
T Consensus 93 Va~~-v~~Gl~~v~L~~~vPV~~GV 116 (156)
T 3nq4_A 93 VAGG-ASNGLASVAQDSGVPVAFGV 116 (156)
T ss_dssp HHHH-HHHHHHHHHHHHCCCEEEEE
T ss_pred HHHH-HHHHHHHHHhccCCCEEEEE
Confidence 4321 1223445556678995 344
No 87
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=80.27 E-value=5 Score=30.34 Aligned_cols=86 Identities=12% Similarity=0.019 Sum_probs=50.5
Q ss_pred CEEEEEecCCChH-------HHHHHHHHCCCeEEEECCCC------------CC-----CCcCEEEEcC----CCcchHH
Q 028010 1 MVVGVLALQGSFN-------EHIAALKRLGVKGVEIRKPD------------QL-----QNVSSLIIPG----GESTTMA 52 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~~G~~v~~~~~~~------------~l-----~~~d~lil~G----G~~~~~~ 52 (215)
+||+|+.-+=|.. ...+.|++.|.++.+++.|- .- .+||++|..| |....++
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaLG~VIrG~T~Hfd 92 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALGTVIRGETYHFD 92 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEEEEEECCSSSTTH
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEeeeeecCCchHHH
Confidence 3788888665433 35678889998777776541 11 4699999888 4443344
Q ss_pred HHHhhCCHHHHHHHHHHcCCcE-EEEe---hHHHHHHHh
Q 028010 53 RLAEYHNLFPALREFVKMGKPV-WGTC---AGLIFLANK 87 (215)
Q Consensus 53 ~l~~~~~l~~~i~~~~~~~~Pi-lGIC---~G~QlLa~~ 87 (215)
.... .-...+++-.++.++|+ +||- -=-|.+.++
T Consensus 93 ~Va~-~v~~gl~~vsl~~~vPV~~GVLT~~~~eQA~~Ra 130 (157)
T 2i0f_A 93 IVSN-ESCRALTDLSVEESIAIGNGILTVENEEQAWVHA 130 (157)
T ss_dssp HHHH-HHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHhhcCCCEEEEEeCCCCHHHHHHHh
Confidence 3332 11233455566789994 4443 234555444
No 88
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=77.95 E-value=10 Score=31.51 Aligned_cols=79 Identities=16% Similarity=0.085 Sum_probs=47.7
Q ss_pred CEEEEEecCCChHH-HHHHHHHCCCeEEEECCC----------------------CCC--CCcCEEEEcCCCcch---HH
Q 028010 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRKP----------------------DQL--QNVSSLIIPGGESTT---MA 52 (215)
Q Consensus 1 m~v~il~~~G~~~s-~~~~l~~~G~~v~~~~~~----------------------~~l--~~~d~lil~GG~~~~---~~ 52 (215)
|||.|+-..|.-.+ +.+.|.++|++|...+.. +.+ .++|.||++-|.+.. ..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHHH
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHHH
Confidence 48889999887776 778889999988876531 122 358988886654321 11
Q ss_pred HHHh-h---CCHHHHHHHHHHcCCcEEEEeh
Q 028010 53 RLAE-Y---HNLFPALREFVKMGKPVWGTCA 79 (215)
Q Consensus 53 ~l~~-~---~~l~~~i~~~~~~~~PilGIC~ 79 (215)
...+ . .+-.+++.+....++|++||..
T Consensus 85 ~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTG 115 (326)
T 3eag_A 85 AILNLGLPYISGPQWLSENVLHHHWVLGVAG 115 (326)
T ss_dssp HHHHTTCCEEEHHHHHHHHTGGGSEEEEEES
T ss_pred HHHHcCCcEEeHHHHHHHHHhcCCCEEEEEC
Confidence 1111 0 1123444443334678888874
No 89
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=75.79 E-value=7.9 Score=29.35 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=44.4
Q ss_pred CEEEEEecCCChH-------HHHHHHHHCCC-eEEEECCCC---------C-CCCcCEEEEcC----CCcchHHHHHhhC
Q 028010 1 MVVGVLALQGSFN-------EHIAALKRLGV-KGVEIRKPD---------Q-LQNVSSLIIPG----GESTTMARLAEYH 58 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~~G~-~v~~~~~~~---------~-l~~~d~lil~G----G~~~~~~~l~~~~ 58 (215)
+||+|+.-+=|.. ...+.|++.|+ ++.+++.|- . ..+||++|..| |....++.... .
T Consensus 18 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGafEiP~aak~la~~yDavIaLG~VIrG~T~Hfd~Va~-~ 96 (160)
T 2c92_A 18 VRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCD-A 96 (160)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHTSCSEEEEEEEEECCSSTHHHHHHH-H
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcHHHHHHHHHHHHhcCCEEEEEeeeecCCchHHHHHHH-H
Confidence 3788888655433 34678888998 555555431 1 23699999888 44444444432 1
Q ss_pred CHHHHHHHHHHcCCcE-EE
Q 028010 59 NLFPALREFVKMGKPV-WG 76 (215)
Q Consensus 59 ~l~~~i~~~~~~~~Pi-lG 76 (215)
-..-+++-.++.++|| +|
T Consensus 97 vs~Gl~~v~L~~~vPV~~G 115 (160)
T 2c92_A 97 VTQGLTRVSLDSSTPIANG 115 (160)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhhcCCCEEEE
Confidence 1233455556679995 45
No 90
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=75.34 E-value=10 Score=33.58 Aligned_cols=87 Identities=9% Similarity=0.037 Sum_probs=53.8
Q ss_pred EEEEEecCCChHH-HHHHHHHCCCeEEEECCC---------------------CCCCCcCEEEEcCCCcchHHHHHh--h
Q 028010 2 VVGVLALQGSFNE-HIAALKRLGVKGVEIRKP---------------------DQLQNVSSLIIPGGESTTMARLAE--Y 57 (215)
Q Consensus 2 ~v~il~~~G~~~s-~~~~l~~~G~~v~~~~~~---------------------~~l~~~d~lil~GG~~~~~~~l~~--~ 57 (215)
||.|+-..|.-.+ +.+.|.+.|++|...+.. +.+.++|.||++-|.+...+.+.. +
T Consensus 24 ~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a~~ 103 (494)
T 4hv4_A 24 HIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAARE 103 (494)
T ss_dssp EEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHHHH
T ss_pred EEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHHHH
Confidence 7889999888776 789999999998877632 124568999986664321111111 1
Q ss_pred C-----CHHHHHHHHHHcCCcEEEEehH------HHHHHHhhc
Q 028010 58 H-----NLFPALREFVKMGKPVWGTCAG------LIFLANKAV 89 (215)
Q Consensus 58 ~-----~l~~~i~~~~~~~~PilGIC~G------~QlLa~~~~ 89 (215)
. +-.+++.+.. +.+|++||..- -.|+++.+.
T Consensus 104 ~gi~v~~~~e~l~~~~-~~~~~IaVTGTnGKTTTt~ml~~iL~ 145 (494)
T 4hv4_A 104 ARIPVIRRAEMLAELM-RYRHGIAVAGTHGKTTTTAMLSSIYA 145 (494)
T ss_dssp TTCCEEEHHHHHHHHH-TTSEEEEEECSSSHHHHHHHHHHHHH
T ss_pred CCCCEEcHHHHHHHHh-cCCCEEEEecCCChHHHHHHHHHHHH
Confidence 1 1234554433 45788888842 355665554
No 91
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=69.86 E-value=16 Score=27.37 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=44.1
Q ss_pred CEEEEEecCCChH-------HHHHHHHHCCC---eEEEECCCC------------CCCCcCEEEEcC----CCcchHHHH
Q 028010 1 MVVGVLALQGSFN-------EHIAALKRLGV---KGVEIRKPD------------QLQNVSSLIIPG----GESTTMARL 54 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~~G~---~v~~~~~~~------------~l~~~d~lil~G----G~~~~~~~l 54 (215)
+||+|+.-+=|.. ...+.|++.|+ ++.+++.|- .-.+||++|..| |....++..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIalG~VIrG~T~Hfd~V 92 (154)
T 1hqk_A 13 LRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIGVLIRGATPHFDYI 92 (154)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHTCTTCCEEEEEEEEECCSSTHHHHH
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHH
Confidence 3788888655433 34678888996 355555431 124699999888 444444444
Q ss_pred HhhCCHHHHHHHHHHcCCcE-EE
Q 028010 55 AEYHNLFPALREFVKMGKPV-WG 76 (215)
Q Consensus 55 ~~~~~l~~~i~~~~~~~~Pi-lG 76 (215)
.. .-..-+++-.++.++|+ +|
T Consensus 93 a~-~vs~gl~~v~l~~~vPV~~G 114 (154)
T 1hqk_A 93 AS-EVSKGLANLSLELRKPITFG 114 (154)
T ss_dssp HH-HHHHHHHHHHHHHTSCEEEE
T ss_pred HH-HHHHHHHHHHhhcCCCEEEE
Confidence 32 11233455556679994 45
No 92
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=68.82 E-value=11 Score=28.42 Aligned_cols=76 Identities=12% Similarity=0.193 Sum_probs=44.6
Q ss_pred CEEEEEecCCChH-------HHHHHHHHCCC--eEEEECCCC------------CCCCcCEEEEcC----CCcchHHHHH
Q 028010 1 MVVGVLALQGSFN-------EHIAALKRLGV--KGVEIRKPD------------QLQNVSSLIIPG----GESTTMARLA 55 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~~G~--~v~~~~~~~------------~l~~~d~lil~G----G~~~~~~~l~ 55 (215)
+||+|+.-+=|.. ...+.|++.|+ ++.+++.|- .-.+||++|..| |....++...
T Consensus 14 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va 93 (156)
T 1c2y_A 14 FRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVV 93 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHHTTCCSEEEEEEECCCCSSTHHHHHH
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHhcCCCCEEEEecccccCCchHHHHHH
Confidence 3788888655432 34678888996 455555431 124699999988 4444444443
Q ss_pred hhCCHHHHHHHHHHcCCcE-EEE
Q 028010 56 EYHNLFPALREFVKMGKPV-WGT 77 (215)
Q Consensus 56 ~~~~l~~~i~~~~~~~~Pi-lGI 77 (215)
. .-..-+++-.++.++|+ +||
T Consensus 94 ~-~v~~gl~~v~L~~~vPV~~GV 115 (156)
T 1c2y_A 94 N-SASSGVLSAGLNSGVPCVFGV 115 (156)
T ss_dssp H-HHHHHHHHHHHHHTSCEEEEE
T ss_pred H-HHHHHHHHHHhhcCCCEEEEE
Confidence 2 11233455556679994 454
No 93
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=68.23 E-value=15 Score=32.00 Aligned_cols=30 Identities=27% Similarity=0.091 Sum_probs=25.2
Q ss_pred EEEEEecCCChHHHHHHHHHCCCeEEEECC
Q 028010 2 VVGVLALQGSFNEHIAALKRLGVKGVEIRK 31 (215)
Q Consensus 2 ~v~il~~~G~~~s~~~~l~~~G~~v~~~~~ 31 (215)
||.|+-+.+.-.+..+.|.+.|++|...+.
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeC
Confidence 789999988878888899999998887653
No 94
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=67.06 E-value=2.1 Score=34.83 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=37.4
Q ss_pred CEEEEEecCCChH---HHHHHHHHC--CCeEEEECCCCCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEE
Q 028010 1 MVVGVLALQGSFN---EHIAALKRL--GVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 1 m~v~il~~~G~~~---s~~~~l~~~--G~~v~~~~~~~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pil 75 (215)
|||+|+..+..-. ...+.+.+. |+++.. .+.....++|.+|..||-++... .++.... ++|++
T Consensus 1 mki~ii~Np~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~D~vv~~GGDGTll~----------~a~~~~~-~~Pil 68 (258)
T 1yt5_A 1 MKIAILYREEREKEGEFLKEKISKEHEVIEFGE-ANAPGRVTADLIVVVGGDGTVLK----------AAKKAAD-GTPMV 68 (258)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHTTTSEEEEEEE-SSSCSCBCCSEEEEEECHHHHHH----------HHTTBCT-TCEEE
T ss_pred CEEEEEEeCCCchHHHHHHHHHHHHhcCCceec-ccccccCCCCEEEEEeCcHHHHH----------HHHHhCC-CCCEE
Confidence 8999987433222 223323222 444432 21111246899999999665432 2223333 78999
Q ss_pred EEehH
Q 028010 76 GTCAG 80 (215)
Q Consensus 76 GIC~G 80 (215)
||=.|
T Consensus 69 GIn~G 73 (258)
T 1yt5_A 69 GFKAG 73 (258)
T ss_dssp EEESS
T ss_pred EEECC
Confidence 99766
No 95
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=66.88 E-value=7 Score=28.99 Aligned_cols=74 Identities=11% Similarity=0.007 Sum_probs=40.7
Q ss_pred CEEEEEecC--CChH----HHHHHHHHCCCeEEEECCCC--------CCCCcCEEEEcCC-CcchHHHHHhhCCHHHHHH
Q 028010 1 MVVGVLALQ--GSFN----EHIAALKRLGVKGVEIRKPD--------QLQNVSSLIIPGG-ESTTMARLAEYHNLFPALR 65 (215)
Q Consensus 1 m~v~il~~~--G~~~----s~~~~l~~~G~~v~~~~~~~--------~l~~~d~lil~GG-~~~~~~~l~~~~~l~~~i~ 65 (215)
|||.|+-+. ||=. .+.+.|+..|+++.+++..+ ++.++|+||+... ....++. ..+.+.+.
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii~Gspty~g~~p~----~~fl~~l~ 76 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAVDPQELIEAVSSARGIVLGTPPSQPSEAV----ATALSTIF 76 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTTCCHHHHHHHHHHCSEEEEECCBSSCCHHH----HHHHHHHH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHhCCEEEEEcCCcCCchhH----HHHHHHHH
Confidence 889998874 4433 34566778899888776432 1236899888653 1111221 12233333
Q ss_pred HHHHcCCcEEEEe
Q 028010 66 EFVKMGKPVWGTC 78 (215)
Q Consensus 66 ~~~~~~~PilGIC 78 (215)
...-.++++.-+|
T Consensus 77 ~~~l~gk~v~~fg 89 (161)
T 3hly_A 77 AAAHNKQAIGLFD 89 (161)
T ss_dssp HHCCTTSEEEEEC
T ss_pred hhhhCCCEEEEEE
Confidence 3212578876665
No 96
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=66.30 E-value=14 Score=27.77 Aligned_cols=48 Identities=17% Similarity=0.168 Sum_probs=31.6
Q ss_pred CEEEEEecCC-------------C--hHHHHHHHHHCCCeEEE---ECCC-C----------CCCCcCEEEEcCCCc
Q 028010 1 MVVGVLALQG-------------S--FNEHIAALKRLGVKGVE---IRKP-D----------QLQNVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~G-------------~--~~s~~~~l~~~G~~v~~---~~~~-~----------~l~~~d~lil~GG~~ 48 (215)
+||+||.... + -.-+.+.|++.|+++.. +.+. + ...++|.||.+||.+
T Consensus 16 ~~v~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g 92 (178)
T 3iwt_A 16 LNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp CEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred CEEEEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcc
Confidence 4888987532 1 12367889999998754 4332 1 124689999999854
No 97
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=66.07 E-value=7.7 Score=29.25 Aligned_cols=48 Identities=15% Similarity=0.261 Sum_probs=31.7
Q ss_pred CEEEEEecCCC--------hHHHHHHHHHCCCeEEE---ECCC-C--------CCC--CcCEEEEcCCCc
Q 028010 1 MVVGVLALQGS--------FNEHIAALKRLGVKGVE---IRKP-D--------QLQ--NVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~G~--------~~s~~~~l~~~G~~v~~---~~~~-~--------~l~--~~d~lil~GG~~ 48 (215)
|||+||..... -..+...|++.|+++.. +.+. + .++ ++|.||.+||.+
T Consensus 14 ~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g 83 (169)
T 1y5e_A 14 VRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTG 83 (169)
T ss_dssp CEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCS
T ss_pred CEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 58888875432 22467788999998654 3332 1 134 799999999854
No 98
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=65.61 E-value=22 Score=30.55 Aligned_cols=70 Identities=21% Similarity=0.185 Sum_probs=45.8
Q ss_pred EEEEEecCCC------hHHHHHHHHHCCCeEEEEC--------------------------CCCCC-CCcCEEEEcCCCc
Q 028010 2 VVGVLALQGS------FNEHIAALKRLGVKGVEIR--------------------------KPDQL-QNVSSLIIPGGES 48 (215)
Q Consensus 2 ~v~il~~~G~------~~s~~~~l~~~G~~v~~~~--------------------------~~~~l-~~~d~lil~GG~~ 48 (215)
+|+|+.=.++ ..++.++|.+.|+++.+-. ..+++ +.+|.+|.-||-+
T Consensus 40 ~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI~lGGDG 119 (365)
T 3pfn_A 40 SVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDG 119 (365)
T ss_dssp EEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEEEESSTT
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEehHHhhhhccccccccccccccccccccChhhcccCCCEEEEEcChH
Confidence 6777775553 3467889999998875421 11222 4689999999977
Q ss_pred chHHHHHhhCCHHHHHHHHHHcCCcEEEEehHH
Q 028010 49 TTMARLAEYHNLFPALREFVKMGKPVWGTCAGL 81 (215)
Q Consensus 49 ~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~ 81 (215)
+.+. ..+.+...+.|++||=.|.
T Consensus 120 T~L~----------aa~~~~~~~~PvlGiN~G~ 142 (365)
T 3pfn_A 120 TLLY----------ASSLFQGSVPPVMAFHLGS 142 (365)
T ss_dssp HHHH----------HHHHCSSSCCCEEEEESSS
T ss_pred HHHH----------HHHHhccCCCCEEEEcCCC
Confidence 6432 2223334679999998873
No 99
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=64.86 E-value=23 Score=26.73 Aligned_cols=76 Identities=16% Similarity=0.216 Sum_probs=45.3
Q ss_pred CEEEEEecCCChH-------HHHHHHHH-CCC---eEEEECCCCC---------C---CCcCEEEEcC----CCcchHHH
Q 028010 1 MVVGVLALQGSFN-------EHIAALKR-LGV---KGVEIRKPDQ---------L---QNVSSLIIPG----GESTTMAR 53 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~-~G~---~v~~~~~~~~---------l---~~~d~lil~G----G~~~~~~~ 53 (215)
+||+|+.-+=|.. ...+.|++ .|+ ++.+++.|-. + .+||++|..| |....++.
T Consensus 18 ~riaIV~arfn~~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~ 97 (159)
T 1kz1_A 18 LRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQGIRASIARNTYDAVIGIGVLIKGSTMHFEY 97 (159)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECSSGGGHHHHHHHHHHHSCCSEEEEEEEEECCSSSHHHH
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEecccccCCchHHHH
Confidence 3788888665533 34678888 886 3666665521 1 4699999888 44444444
Q ss_pred HHhhCCHHHHHHHHHHcCCcE-EEE
Q 028010 54 LAEYHNLFPALREFVKMGKPV-WGT 77 (215)
Q Consensus 54 l~~~~~l~~~i~~~~~~~~Pi-lGI 77 (215)
...+ -...+.+-.++.++|+ +||
T Consensus 98 Va~~-v~~Gl~~v~L~~~vPV~~GV 121 (159)
T 1kz1_A 98 ISEA-VVHGLMRVGLDSGVPVILGL 121 (159)
T ss_dssp HHHH-HHHHHHHHHHHHCCCEEEEE
T ss_pred HHHH-HHHHHHHHHhhcCCCEEEEE
Confidence 4321 1233455556678994 444
No 100
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=62.52 E-value=20 Score=29.88 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=45.7
Q ss_pred EEEEEecCCC--------hHHHHHHHHHCCCeEEEECC--CC---------CCCCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQGS--------FNEHIAALKRLGVKGVEIRK--PD---------QLQNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~G~--------~~s~~~~l~~~G~~v~~~~~--~~---------~l~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
|++|+..+.+ +..+.+.|++.|+++.+... +. ..+++|.||+.||-++..+-+
T Consensus 26 ~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~GGDGTv~~v~-------- 97 (337)
T 2qv7_A 26 RARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVV-------- 97 (337)
T ss_dssp EEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEECHHHHHHHH--------
T ss_pred eEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHHHHHHHhhcCCCEEEEEcCchHHHHHH--------
Confidence 6888876332 22567888999998876542 21 124689999999866543222
Q ss_pred HHHHH--HHcCCcEEEEehHHH-HHHHhhc
Q 028010 63 ALREF--VKMGKPVWGTCAGLI-FLANKAV 89 (215)
Q Consensus 63 ~i~~~--~~~~~PilGIC~G~Q-lLa~~~~ 89 (215)
+.. ...+.|+.+|=+|-- .|++.++
T Consensus 98 --~~l~~~~~~~pl~iIP~GT~N~lAr~Lg 125 (337)
T 2qv7_A 98 --NGIAEKPNRPKLGVIPMGTVNDFGRALH 125 (337)
T ss_dssp --HHHTTCSSCCEEEEEECSSCCHHHHHTT
T ss_pred --HHHHhCCCCCcEEEecCCcHhHHHHHcC
Confidence 111 134677777755532 3444443
No 101
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=62.23 E-value=20 Score=25.51 Aligned_cols=45 Identities=9% Similarity=-0.045 Sum_probs=29.9
Q ss_pred CEEEEEec--CCChHH----HHHHHHHCCCeEEEECC----CCCCCC-cCEEEEcC
Q 028010 1 MVVGVLAL--QGSFNE----HIAALKRLGVKGVEIRK----PDQLQN-VSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~--~G~~~s----~~~~l~~~G~~v~~~~~----~~~l~~-~d~lil~G 45 (215)
|||.|+-. .|+-.. +.+.++..|+++++++. ..++.+ +|.||+..
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~~~~~l~~~~d~ii~~~ 56 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGC 56 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGGGCCSTTTTTTCSEEEEEE
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehhhCCHHHhcCcCCEEEEEe
Confidence 88988876 344332 34556667888877652 346778 99988853
No 102
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=61.92 E-value=25 Score=25.01 Aligned_cols=45 Identities=9% Similarity=0.040 Sum_probs=30.6
Q ss_pred CEEEEEecC--CChHH----HHHHHHHCCCeEEEECC----CCCCC-CcCEEEEcC
Q 028010 1 MVVGVLALQ--GSFNE----HIAALKRLGVKGVEIRK----PDQLQ-NVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~--G~~~s----~~~~l~~~G~~v~~~~~----~~~l~-~~d~lil~G 45 (215)
|||.|+-.. |+-.. +.+.++..|+++.+++. ..++. ++|.+|+..
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~l~~~~d~ii~g~ 57 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADASAENLADGYDAVLFGC 57 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTBCCTTTTTTCSEEEEEE
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhCCHhHhcccCCEEEEEe
Confidence 488888764 44333 45566778988887753 34677 899888754
No 103
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=61.50 E-value=19 Score=26.99 Aligned_cols=75 Identities=20% Similarity=0.214 Sum_probs=44.1
Q ss_pred CEEEEEecCCChH-------HHHHHHHHCCCe---EEEECCCC------------CCCCcCEEEEcC----CCcchHHHH
Q 028010 1 MVVGVLALQGSFN-------EHIAALKRLGVK---GVEIRKPD------------QLQNVSSLIIPG----GESTTMARL 54 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~~G~~---v~~~~~~~------------~l~~~d~lil~G----G~~~~~~~l 54 (215)
+||+|+.-+=|.. ...+.|++.|++ +.+++.|- .-.+||++|..| |....++..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~V 92 (154)
T 1rvv_A 13 LKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYV 92 (154)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEEEEECCSSSHHHHH
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHH
Confidence 3788888655433 346788889963 55555431 114699999888 444444444
Q ss_pred HhhCCHHHHHHHHHHcCCcE-EE
Q 028010 55 AEYHNLFPALREFVKMGKPV-WG 76 (215)
Q Consensus 55 ~~~~~l~~~i~~~~~~~~Pi-lG 76 (215)
.. .-..-+++-.++.++|+ +|
T Consensus 93 ~~-~vs~Gl~~v~l~~~vPV~~G 114 (154)
T 1rvv_A 93 CN-EAAKGIAQAANTTGVPVIFG 114 (154)
T ss_dssp HH-HHHHHHHHHHHHHCSCEEEE
T ss_pred HH-HHHHHHHHHHhhhCCCEEEE
Confidence 32 11233455556679994 45
No 104
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=61.11 E-value=14 Score=27.77 Aligned_cols=74 Identities=14% Similarity=0.111 Sum_probs=42.3
Q ss_pred CEEEEEecCCChH-------HHHHHHHHCCC---eEEEECCCC---------CC---CCcCEEEEcC----CCcchHHHH
Q 028010 1 MVVGVLALQGSFN-------EHIAALKRLGV---KGVEIRKPD---------QL---QNVSSLIIPG----GESTTMARL 54 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~~G~---~v~~~~~~~---------~l---~~~d~lil~G----G~~~~~~~l 54 (215)
+||+|+.-+=|.. ...+.|++.|+ ++.+++.|- .+ .+||++|..| |....++..
T Consensus 12 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~V 91 (157)
T 2obx_A 12 VRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGAYEIPLHARTLAETGRYGAVLGTAFVVNGGIYRHEFV 91 (157)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHHHTCCSEEEEEEECCCCSSBCCHHH
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeccccCCCcHHHHH
Confidence 3788888665533 34677888886 355555442 11 4699999988 433333333
Q ss_pred HhhCCHHHHHHHHHHcCCcEE
Q 028010 55 AEYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 55 ~~~~~l~~~i~~~~~~~~Pil 75 (215)
.. .-..-+++-.++.++||.
T Consensus 92 a~-~vs~Gl~~v~L~~~vPV~ 111 (157)
T 2obx_A 92 AS-AVIDGMMNVQLSTGVPVL 111 (157)
T ss_dssp HH-HHHHHHHHHHHHHCCCEE
T ss_pred HH-HHHHHHHHHHhhcCCCEE
Confidence 22 111234455556788853
No 105
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=60.72 E-value=13 Score=28.40 Aligned_cols=48 Identities=19% Similarity=0.144 Sum_probs=31.3
Q ss_pred CEEEEEecC----------CC-----hHHHHHHHHHCCCeEEE---ECCC-C--------CCCC--cCEEEEcCCCc
Q 028010 1 MVVGVLALQ----------GS-----FNEHIAALKRLGVKGVE---IRKP-D--------QLQN--VSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~----------G~-----~~s~~~~l~~~G~~v~~---~~~~-~--------~l~~--~d~lil~GG~~ 48 (215)
+||+||... |. -..+...|++.|+++.. +.+. + .+++ +|.||.+||.+
T Consensus 16 ~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 16 LNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp CEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred CEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 378888764 42 12367789999998654 3332 1 1234 89999999854
No 106
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=59.15 E-value=13 Score=27.93 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=31.6
Q ss_pred CEEEEEecC-----C-----ChHHHHHHHHHCCCeEE---EECCCCC--------C-CCcCEEEEcCCCc
Q 028010 1 MVVGVLALQ-----G-----SFNEHIAALKRLGVKGV---EIRKPDQ--------L-QNVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~-----G-----~~~s~~~~l~~~G~~v~---~~~~~~~--------l-~~~d~lil~GG~~ 48 (215)
+||+||... | |-..+...|++.|+++. ++.+.+. + .++|.||.+||.+
T Consensus 8 ~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd~~i~~al~~a~~~~~DlVittGG~s 77 (164)
T 3pzy_A 8 RSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVADGSPVGEALRKAIDDDVDVILTSGGTG 77 (164)
T ss_dssp CEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECSSHHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred CEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCCHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 388888853 2 22246788999999764 4443332 2 3689999999864
No 107
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=58.97 E-value=52 Score=25.67 Aligned_cols=67 Identities=22% Similarity=0.425 Sum_probs=41.0
Q ss_pred EEEEEecCCC--h-----HHHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQGS--F-----NEHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~G~--~-----~s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-.-+ + ..+.+++++.|+++.+.....+ + .++|+||+.+...... .+
T Consensus 7 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~---------~~ 77 (291)
T 3l49_A 7 TIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVL---------NP 77 (291)
T ss_dssp EEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHH---------HH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhh---------HH
Confidence 6777764321 2 2356778889999988754322 1 3689999876542211 23
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++.+.+.++|+..+
T Consensus 78 ~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 78 WLQKINDAGIPLFTV 92 (291)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCcEEEe
Confidence 345555678887765
No 108
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=58.33 E-value=11 Score=28.56 Aligned_cols=48 Identities=15% Similarity=0.286 Sum_probs=31.4
Q ss_pred CEEEEEecCCC--------hHHHHHHHHHCCCeEEE---ECCC-CC--------CC--CcCEEEEcCCCc
Q 028010 1 MVVGVLALQGS--------FNEHIAALKRLGVKGVE---IRKP-DQ--------LQ--NVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~G~--------~~s~~~~l~~~G~~v~~---~~~~-~~--------l~--~~d~lil~GG~~ 48 (215)
|||+||..... -..+...|++.|+++.. +.+. +. ++ ++|.||.+||.+
T Consensus 11 ~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g 80 (172)
T 1mkz_A 11 TRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTG 80 (172)
T ss_dssp CEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCS
T ss_pred CEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 58899886432 22467889999998654 3332 11 22 389999999753
No 109
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=58.14 E-value=34 Score=25.67 Aligned_cols=73 Identities=16% Similarity=0.158 Sum_probs=42.8
Q ss_pred EEEEEecCCC----hHHHHHHHHHCCCe--EEEECCCC---------CC---CCcCEEEEcC--CCcchHHHHHhhCCHH
Q 028010 2 VVGVLALQGS----FNEHIAALKRLGVK--GVEIRKPD---------QL---QNVSSLIIPG--GESTTMARLAEYHNLF 61 (215)
Q Consensus 2 ~v~il~~~G~----~~s~~~~l~~~G~~--v~~~~~~~---------~l---~~~d~lil~G--G~~~~~~~l~~~~~l~ 61 (215)
||+|+.-+=| .....+.|++.|++ +.+++.|- .+ .+||++|..| |....++....+ -..
T Consensus 4 ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPGafEiP~aak~la~~~~yDavIaLG~VG~T~Hfd~Va~~-vs~ 82 (156)
T 2b99_A 4 KVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLEEEGCDIVMALGMPGKAEKDKVCAHE-ASL 82 (156)
T ss_dssp EEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHHHSCCSEEEEEECCCSSHHHHHHHHH-HHH
T ss_pred EEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHHHhcCCCCEEEEecccCCcchhHHHHHH-HHH
Confidence 8999885433 23467889999964 33344431 11 4699999988 544444444321 122
Q ss_pred HHHHHHHHcCCcEE
Q 028010 62 PALREFVKMGKPVW 75 (215)
Q Consensus 62 ~~i~~~~~~~~Pil 75 (215)
-+.+-.++.++||.
T Consensus 83 Gl~~v~L~~~vPV~ 96 (156)
T 2b99_A 83 GLMLAQLMTNKHII 96 (156)
T ss_dssp HHHHHHHHHTCCEE
T ss_pred HHHHHHhhhCCCEE
Confidence 34455566799964
No 110
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=57.89 E-value=15 Score=27.77 Aligned_cols=73 Identities=10% Similarity=0.054 Sum_probs=42.3
Q ss_pred EEEEEecCCChH-------HHHHHHHHCCC---eEEEECCCC------------CCCCcCEEEEcC----CCcchHHHHH
Q 028010 2 VVGVLALQGSFN-------EHIAALKRLGV---KGVEIRKPD------------QLQNVSSLIIPG----GESTTMARLA 55 (215)
Q Consensus 2 ~v~il~~~G~~~-------s~~~~l~~~G~---~v~~~~~~~------------~l~~~d~lil~G----G~~~~~~~l~ 55 (215)
||+|+.-+=|.. ...+.|++.|+ ++.+++.|- .-.+||++|..| |....++...
T Consensus 12 ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va 91 (158)
T 1di0_A 12 KIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLARTGRYAAIVGAAFVIDGGIYDHDFVA 91 (158)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEEECCCCSSBCCHHHH
T ss_pred EEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeccccCCCcHHHHHH
Confidence 889988665533 34677888886 355555442 114699999988 4333333332
Q ss_pred hhCCHHHHHHHHHHcCCcEE
Q 028010 56 EYHNLFPALREFVKMGKPVW 75 (215)
Q Consensus 56 ~~~~l~~~i~~~~~~~~Pil 75 (215)
. .-..-+++-.++.++|+.
T Consensus 92 ~-~vs~Gl~~v~L~~~vPV~ 110 (158)
T 1di0_A 92 T-AVINGMMQVQLETEVPVL 110 (158)
T ss_dssp H-HHHHHHHHHHHHHCCCEE
T ss_pred H-HHHHHHHHHHhhcCCCEE
Confidence 2 111234455556789853
No 111
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=57.65 E-value=6.2 Score=29.65 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=31.2
Q ss_pred CEEEEEecCC----------ChHHHHHHHHHCCCeEEE---ECCC-C--------CCC--CcCEEEEcCCCc
Q 028010 1 MVVGVLALQG----------SFNEHIAALKRLGVKGVE---IRKP-D--------QLQ--NVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~G----------~~~s~~~~l~~~G~~v~~---~~~~-~--------~l~--~~d~lil~GG~~ 48 (215)
|||+||.... |-..+...|++.|+++.. +.+. + .++ ++|.||.+||.+
T Consensus 2 ~~v~Ii~tGdEl~~G~i~D~n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g 73 (164)
T 2is8_A 2 FRVGILTVSDKGFRGERQDTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTG 73 (164)
T ss_dssp EEEEEEEECHHHHHTSSCCCHHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred cEEEEEEEcCcccCCCcccchHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 3888888522 223467788999987654 3332 1 123 699999999854
No 112
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=57.07 E-value=67 Score=25.04 Aligned_cols=67 Identities=19% Similarity=0.271 Sum_probs=40.7
Q ss_pred EEEEEecCCC--hH-----HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQGS--FN-----EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~G~--~~-----s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-.-+ +. .+.+++++.|+++.+.....+ + .++|+||+.+...... .+
T Consensus 10 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~---------~~ 80 (293)
T 3l6u_A 10 IVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYI---------GS 80 (293)
T ss_dssp EEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTT---------HH
T ss_pred EEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHH---------HH
Confidence 6777764322 22 356778889999888754321 1 4689999976533221 13
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++.+.+.++|+.-+
T Consensus 81 ~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 81 AIEEAKKAGIPVFAI 95 (293)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCEEEe
Confidence 344555578887765
No 113
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=56.02 E-value=40 Score=29.98 Aligned_cols=89 Identities=16% Similarity=0.095 Sum_probs=51.6
Q ss_pred CEEEEEecCCChHH-HHHHHHHCCCeEEEECCC----------------------CCC-CCcCEEEEcCCCcchHHHH--
Q 028010 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRKP----------------------DQL-QNVSSLIIPGGESTTMARL-- 54 (215)
Q Consensus 1 m~v~il~~~G~~~s-~~~~l~~~G~~v~~~~~~----------------------~~l-~~~d~lil~GG~~~~~~~l-- 54 (215)
+||-++-..|.-.+ +.+.|.+.|++|...+.. +.+ .++|.||++-|.+...+.+
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~l~~ 99 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDVIEY 99 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHHHHH
T ss_pred CEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHHHHH
Confidence 47888888887776 577788899888776531 112 3579998866643211111
Q ss_pred -Hh-h---CCHHHHHHHHHHcCCcEEEEehH------HHHHHHhhc
Q 028010 55 -AE-Y---HNLFPALREFVKMGKPVWGTCAG------LIFLANKAV 89 (215)
Q Consensus 55 -~~-~---~~l~~~i~~~~~~~~PilGIC~G------~QlLa~~~~ 89 (215)
.+ . .+-.+++.+....++|++||..- -.|+++.+.
T Consensus 100 a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~ 145 (524)
T 3hn7_A 100 MLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILH 145 (524)
T ss_dssp HHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHH
T ss_pred HHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHH
Confidence 11 0 11234444433346789998832 455555543
No 114
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=55.38 E-value=61 Score=24.73 Aligned_cols=71 Identities=14% Similarity=0.064 Sum_probs=45.4
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCC-CCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEe
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKP-DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~-~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC 78 (215)
|||+|+-. |+.. .+...|.+.|.++..++.. +.+.++|.+++.=. +..... +.+.+...++ +..++-++
T Consensus 20 ~~I~iiG~-G~mG~~la~~l~~~g~~V~~~~~~~~~~~~aD~vi~av~-~~~~~~------v~~~l~~~~~-~~~vi~~~ 90 (209)
T 2raf_A 20 MEITIFGK-GNMGQAIGHNFEIAGHEVTYYGSKDQATTLGEIVIMAVP-YPALAA------LAKQYATQLK-GKIVVDIT 90 (209)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECTTCCCSSCCSEEEECSC-HHHHHH------HHHHTHHHHT-TSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHhccCCEEEEcCC-cHHHHH------HHHHHHHhcC-CCEEEEEC
Confidence 68999984 7666 4668899999999888643 35678999888533 222111 2334445555 66666555
Q ss_pred hH
Q 028010 79 AG 80 (215)
Q Consensus 79 ~G 80 (215)
.|
T Consensus 91 ~g 92 (209)
T 2raf_A 91 NP 92 (209)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 115
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=55.25 E-value=16 Score=30.84 Aligned_cols=45 Identities=11% Similarity=-0.041 Sum_probs=29.6
Q ss_pred CEEEEEecCC--ChH----HHHHHHHHCCCeEEEECCCC--------CCCCcCEEEEcC
Q 028010 1 MVVGVLALQG--SFN----EHIAALKRLGVKGVEIRKPD--------QLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~G--~~~----s~~~~l~~~G~~v~~~~~~~--------~l~~~d~lil~G 45 (215)
|||.|+-+.. +-. .+.+.+++.|+++++++..+ ++.++|+||+.-
T Consensus 257 ~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~d~iiigs 315 (404)
T 2ohh_A 257 ERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHEDDRSEIVKDILESGAIALGA 315 (404)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETTTSCHHHHHHHHHTCSEEEEEC
T ss_pred CcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHHCCEEEEEC
Confidence 5777777643 222 24556666788888876432 356899999865
No 116
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=55.13 E-value=18 Score=30.68 Aligned_cols=76 Identities=16% Similarity=0.186 Sum_probs=41.9
Q ss_pred CEEEEEecCC--ChH----HHHHHHHHCCCeEEEECCCC--------CCCCcCEEEEcCCC-c-chHHHHHhhCCHHHHH
Q 028010 1 MVVGVLALQG--SFN----EHIAALKRLGVKGVEIRKPD--------QLQNVSSLIIPGGE-S-TTMARLAEYHNLFPAL 64 (215)
Q Consensus 1 m~v~il~~~G--~~~----s~~~~l~~~G~~v~~~~~~~--------~l~~~d~lil~GG~-~-~~~~~l~~~~~l~~~i 64 (215)
|||.|+.+.. |-. .+.+.++..|+++++++..+ ++.++|+||+.... . .....+. .+.+.+
T Consensus 257 ~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~l~~~D~iiigsP~y~~~~~~~~k---~fld~l 333 (414)
T 2q9u_A 257 KKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSSDITKVALHTYDSGAVAFASPTLNNTMMPSVA---AALNYV 333 (414)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGCCHHHHHHHHHTCSEEEEECCCBTTBCCHHHH---HHHHHH
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcCCHHHHHHHHHhCCEEEEEcCccCcCchHHHH---HHHHHH
Confidence 4888887644 322 24556677888888775321 45689999987631 1 1111221 223333
Q ss_pred HHHHH-cCCcEEEEeh
Q 028010 65 REFVK-MGKPVWGTCA 79 (215)
Q Consensus 65 ~~~~~-~~~PilGIC~ 79 (215)
....- .+||+.-+|.
T Consensus 334 ~~~~~~~~K~~~~~~t 349 (414)
T 2q9u_A 334 RGLTLIKGKPAFAFGA 349 (414)
T ss_dssp HHHTTTTTSBEEEEEE
T ss_pred HhhcccCCCEEEEEEe
Confidence 32222 5788776654
No 117
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=54.30 E-value=8.9 Score=30.77 Aligned_cols=38 Identities=18% Similarity=0.360 Sum_probs=30.7
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCCCCcC
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQLQNVS 39 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l~~~d 39 (215)
|||+|+-. |... ++...|++.|.++..++.++++.++|
T Consensus 7 mkI~IIG~-G~~G~sLA~~L~~~G~~V~~~~~~~~~~~aD 45 (232)
T 3dfu_A 7 LRVGIFDD-GSSTVNMAEKLDSVGHYVTVLHAPEDIRDFE 45 (232)
T ss_dssp CEEEEECC-SCCCSCHHHHHHHTTCEEEECSSGGGGGGCS
T ss_pred cEEEEEee-CHHHHHHHHHHHHCCCEEEEecCHHHhccCC
Confidence 79999987 5543 67899999999998887766677788
No 118
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=53.97 E-value=70 Score=25.36 Aligned_cols=67 Identities=15% Similarity=0.096 Sum_probs=40.1
Q ss_pred EEEEEecC--CChH-----HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQ--GSFN-----EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~--G~~~-----s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-. ..+. .+.+++++.|+++.+.....+ + .++|+||+.+...... .+
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~---------~~ 74 (313)
T 3m9w_A 4 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVL---------SN 74 (313)
T ss_dssp EEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSC---------HH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhh---------HH
Confidence 67777642 2222 356778889999888754321 1 4699999987533221 13
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++++.+.++|+.-+
T Consensus 75 ~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 75 VVKEAKQEGIKVLAY 89 (313)
T ss_dssp HHHHHHTTTCEEEEE
T ss_pred HHHHHHHCCCeEEEE
Confidence 344445567887644
No 119
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=53.73 E-value=17 Score=29.48 Aligned_cols=64 Identities=11% Similarity=0.123 Sum_probs=43.0
Q ss_pred HHHHHHHCCCeEEEECCC----------CCCCCcCEEEEcCCCcchH-----HHHHh--hCCHHHHHHHHHHcCCcEEEE
Q 028010 15 HIAALKRLGVKGVEIRKP----------DQLQNVSSLIIPGGESTTM-----ARLAE--YHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 15 ~~~~l~~~G~~v~~~~~~----------~~l~~~d~lil~GG~~~~~-----~~l~~--~~~l~~~i~~~~~~~~PilGI 77 (215)
+.++|+..|++|+.+... +.|.++|.||+..-..... -+... ...-.+.|++++++|.-++++
T Consensus 38 ~~~aL~~~~~~V~~i~~~~~~~~fP~~~~~L~~yDvIIl~d~~~~~~l~~~~~~~~~~~~~~~~~~l~~~V~~GGgLi~~ 117 (248)
T 3soz_A 38 LLSCLRQGNIDVDYMPAHIVQTRFPQTAEALACYDAIVISDIGSNTFLLQNRTFYNMDIIPDALQLIADYVAEGGGLLMI 117 (248)
T ss_dssp HHHHHTTTTCEEEEEETTHHHHSCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhcCCceeEEeCchhhhhhCCCChHHHhcCCEEEEcCCCcchhccCccccccccCCHHHHHHHHHHHHhCCEEEEE
Confidence 778999999999987542 2457899999985221111 01110 123478999999999888877
Q ss_pred e
Q 028010 78 C 78 (215)
Q Consensus 78 C 78 (215)
-
T Consensus 118 g 118 (248)
T 3soz_A 118 G 118 (248)
T ss_dssp C
T ss_pred c
Confidence 3
No 120
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=53.34 E-value=20 Score=26.88 Aligned_cols=45 Identities=22% Similarity=0.256 Sum_probs=29.2
Q ss_pred CEEEEEecC--CChH----HHHHHHHH-CCCeEEEECCC-----------------------CCCCCcCEEEEcC
Q 028010 1 MVVGVLALQ--GSFN----EHIAALKR-LGVKGVEIRKP-----------------------DQLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~--G~~~----s~~~~l~~-~G~~v~~~~~~-----------------------~~l~~~d~lil~G 45 (215)
|||.|+... |+-. .+.+.+++ .|+++++++.. +++.++|+||+.-
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gs 76 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGT 76 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCCSCHHHHHHTTCCCCCSCBCCGGGGGGCSEEEEEE
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccccCchhhhhhcccccccCchhhHHHHHHCCEEEEEe
Confidence 589998875 3222 24556676 79888776532 2345789988854
No 121
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=53.03 E-value=15 Score=29.73 Aligned_cols=45 Identities=13% Similarity=0.261 Sum_probs=32.3
Q ss_pred CEEEEEecCCChH-----------HHHHHHHHCCCeEEEECCC--------C--CCCCcCEEEEcC
Q 028010 1 MVVGVLALQGSFN-----------EHIAALKRLGVKGVEIRKP--------D--QLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~G~~~-----------s~~~~l~~~G~~v~~~~~~--------~--~l~~~d~lil~G 45 (215)
|||+||+...|.. -+.+.+.+.|.+|.++.-. + +...||.|++-.
T Consensus 1 mkiai~n~gnni~~fkt~p~setiyl~~~~~~mgl~vd~is~k~~iy~~~fd~vd~n~ydr~~vvn 66 (351)
T 1jg7_A 1 MKIAIINMGNNVINFKTVPSSETIYLFKVISEMGLNVDIISLKNGVYTKSFDEVDVNDYDRLIVVN 66 (351)
T ss_dssp CCEEEEESSSCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEESSCCSSEEEGGGSCGGGCSEEEEEC
T ss_pred CceEEEecCCccccceecCccceeeHHHHHHHcCCCeeEEEeccceeeeecccCCccccceEEEEe
Confidence 8999999866532 2467889999999887642 1 334689877654
No 122
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=52.93 E-value=19 Score=25.76 Aligned_cols=45 Identities=9% Similarity=0.104 Sum_probs=30.2
Q ss_pred CEEEEEec--CCChHH----HHHHHHHCCCeEEEECC--CCCCCCcCEEEEcC
Q 028010 1 MVVGVLAL--QGSFNE----HIAALKRLGVKGVEIRK--PDQLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~--~G~~~s----~~~~l~~~G~~v~~~~~--~~~l~~~d~lil~G 45 (215)
|||.|+-+ .|+-.. +.+.|...|+++.+++. ..++.++|.|++..
T Consensus 2 ~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~l~~~d~vi~g~ 54 (147)
T 2hna_A 2 ADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLPASGIWLVIS 54 (147)
T ss_dssp CSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEECCTTSCSSCSEEEEEEEC
T ss_pred CeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEecCCCHHHcccCCeEEEEE
Confidence 37888765 455333 45567777898887764 34677889888854
No 123
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=51.71 E-value=83 Score=24.49 Aligned_cols=45 Identities=7% Similarity=0.160 Sum_probs=28.8
Q ss_pred EEEEEecC--CChH-----HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCC
Q 028010 2 VVGVLALQ--GSFN-----EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (215)
Q Consensus 2 ~v~il~~~--G~~~-----s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG 46 (215)
+|+++.-. ..+. .+.+++++.|+++.+.....+ + .++|+||+.+.
T Consensus 4 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 67 (290)
T 2fn9_A 4 KMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPT 67 (290)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 67887642 2222 345678889999887654221 1 46899999764
No 124
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=50.94 E-value=25 Score=26.30 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=20.7
Q ss_pred CEEEEEecC--CChH----HHHHHHHHCCCeEEEECCC
Q 028010 1 MVVGVLALQ--GSFN----EHIAALKRLGVKGVEIRKP 32 (215)
Q Consensus 1 m~v~il~~~--G~~~----s~~~~l~~~G~~v~~~~~~ 32 (215)
|||.|+... |+-. .+.+.+++.|+++++++..
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 389888864 3222 2455667789998877643
No 125
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=50.85 E-value=78 Score=24.91 Aligned_cols=67 Identities=15% Similarity=0.116 Sum_probs=40.6
Q ss_pred EEEEEecCCC--hH-----HHHHHHHHCCCeEEEECCC--CC-------C-----CCcCEEEEcCCCcchHHHHHhhCCH
Q 028010 2 VVGVLALQGS--FN-----EHIAALKRLGVKGVEIRKP--DQ-------L-----QNVSSLIIPGGESTTMARLAEYHNL 60 (215)
Q Consensus 2 ~v~il~~~G~--~~-----s~~~~l~~~G~~v~~~~~~--~~-------l-----~~~d~lil~GG~~~~~~~l~~~~~l 60 (215)
+|+++.-.-+ +. .+.+++++.|+++.+.... .+ + .++|+||+.+......
T Consensus 5 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~--------- 75 (297)
T 3rot_A 5 KYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAF--------- 75 (297)
T ss_dssp EEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTT---------
T ss_pred EEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHH---------
Confidence 6788765432 22 3556778889999887643 11 1 4689999976533221
Q ss_pred HHHHHHHHHcCCcEEEE
Q 028010 61 FPALREFVKMGKPVWGT 77 (215)
Q Consensus 61 ~~~i~~~~~~~~PilGI 77 (215)
.+.++++.+.++|+.-+
T Consensus 76 ~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 76 SKSLQRANKLNIPVIAV 92 (297)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 22344445568887665
No 126
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=50.01 E-value=87 Score=24.34 Aligned_cols=71 Identities=18% Similarity=0.130 Sum_probs=41.5
Q ss_pred EEEEEecC--CChH-----HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQ--GSFN-----EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~--G~~~-----s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-. ..+. .+.+++++.|+++.+.....+ + .++|+||+.+....... ...+
T Consensus 17 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~------~~~~ 90 (298)
T 3tb6_A 17 TIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQT------PNIG 90 (298)
T ss_dssp EEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCC------TTHH
T ss_pred eEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccC------CcHH
Confidence 57776642 2222 356778889999988754321 1 47999999875322100 0123
Q ss_pred HHHHHHHcCCcEEEEe
Q 028010 63 ALREFVKMGKPVWGTC 78 (215)
Q Consensus 63 ~i~~~~~~~~PilGIC 78 (215)
.++++.+.++|+.-+.
T Consensus 91 ~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 91 YYLNLEKNGIPFAMIN 106 (298)
T ss_dssp HHHHHHHTTCCEEEES
T ss_pred HHHHHHhcCCCEEEEe
Confidence 4445555789987664
No 127
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=50.00 E-value=44 Score=25.37 Aligned_cols=86 Identities=19% Similarity=0.272 Sum_probs=49.8
Q ss_pred CEEEEEecCCChH-------HHHHHHHHCCC---eEEEECCCC---------C--------CCCcCEEEEcC----CCcc
Q 028010 1 MVVGVLALQGSFN-------EHIAALKRLGV---KGVEIRKPD---------Q--------LQNVSSLIIPG----GEST 49 (215)
Q Consensus 1 m~v~il~~~G~~~-------s~~~~l~~~G~---~v~~~~~~~---------~--------l~~~d~lil~G----G~~~ 49 (215)
+||+|+.-+=|.. ...+.|++.|+ ++.+++.|- . -.+||++|..| |...
T Consensus 17 ~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGafEiP~aak~la~~~~~~~~~yDavIaLG~VIrG~T~ 96 (168)
T 1ejb_A 17 IRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPIGVLIKGSTM 96 (168)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSGGGHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCSSS
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhhccccCCCcCEEEEecccccCCch
Confidence 3788888665533 34678888996 466665541 1 13599999888 4444
Q ss_pred hHHHHHhhCCHHHHHHHHHHcCCc-EEEE--eh-HHHHHHHh
Q 028010 50 TMARLAEYHNLFPALREFVKMGKP-VWGT--CA-GLIFLANK 87 (215)
Q Consensus 50 ~~~~l~~~~~l~~~i~~~~~~~~P-ilGI--C~-G~QlLa~~ 87 (215)
.++....+ -..-+++-.++.++| ++|| |- =-|.+.++
T Consensus 97 Hfd~Va~~-vs~Gl~~vsL~~~vPV~~GVLT~~~~eQA~~Ra 137 (168)
T 1ejb_A 97 HFEYISDS-TTHALMNLQEKVDMPVIFGLLTCMTEEQALARA 137 (168)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHTSCBCCEEEEESSHHHHHHHB
T ss_pred HHHHHHHH-HHHHHHHHHhhcCCCEEEEEecCCCHHHHHHhc
Confidence 44444321 123345555667888 4564 33 33555554
No 128
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=49.52 E-value=71 Score=24.76 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=30.3
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEE-EECCCC----------C-C-CCcCEEEEcCC
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGV-EIRKPD----------Q-L-QNVSSLIIPGG 46 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~-~~~~~~----------~-l-~~~d~lil~GG 46 (215)
|||+|+-+ |... .+.+.|.+.|+++. +++..+ + + .++|.+++.-.
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~~~~~~~~~~~~l~~~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAAS 59 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCCCTTEESSHHHHTTSCCSEEEECSC
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCcchhhhcCCHHHHhcCCCCEEEECCC
Confidence 89999998 7655 35677778899874 333211 1 3 46898888654
No 129
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=48.94 E-value=17 Score=27.66 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=29.5
Q ss_pred CEEEEEecCCC----------hHHHHHHHH---HCCCeEEE--ECCC-C--------CCC--CcCEEEEcCCCc
Q 028010 1 MVVGVLALQGS----------FNEHIAALK---RLGVKGVE--IRKP-D--------QLQ--NVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~G~----------~~s~~~~l~---~~G~~v~~--~~~~-~--------~l~--~~d~lil~GG~~ 48 (215)
|||+||..... -..+...|+ +.|+++.. +.+. + .++ ++|.||.+||.+
T Consensus 6 ~rv~IistGdE~~~G~i~Dsn~~~l~~~l~~l~~~G~~v~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g 79 (178)
T 2pbq_A 6 AVIGVVTISDRASKGIYEDISGKAIIDYLKDVIITPFEVEYRVIPDERDLIEKTLIELADEKGCSLILTTGGTG 79 (178)
T ss_dssp CEEEEEEECHHHHHTSSCCHHHHHHHHHHHHHBCSCCEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred CEEEEEEeCCcCCCCCeecchHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 58898885321 123566677 79998732 3332 1 123 699999999854
No 130
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=48.29 E-value=86 Score=24.60 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=39.5
Q ss_pred EEEEEecCC--ChH-----HHHHHHHHCCCeEEEE-CCCCC-------C-----CCcCEEEEcCCCcchHHHHHhhCCHH
Q 028010 2 VVGVLALQG--SFN-----EHIAALKRLGVKGVEI-RKPDQ-------L-----QNVSSLIIPGGESTTMARLAEYHNLF 61 (215)
Q Consensus 2 ~v~il~~~G--~~~-----s~~~~l~~~G~~v~~~-~~~~~-------l-----~~~d~lil~GG~~~~~~~l~~~~~l~ 61 (215)
+|+++...- .+. .+.+++++.|+++.+. ....+ + .++|+||+.+...... .
T Consensus 6 ~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~---------~ 76 (305)
T 3g1w_A 6 TYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVEL---------T 76 (305)
T ss_dssp EEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTT---------H
T ss_pred eEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHH---------H
Confidence 677766433 222 3556778889999884 32211 1 3689999987543211 2
Q ss_pred HHHHHHHHcCCcEEEE
Q 028010 62 PALREFVKMGKPVWGT 77 (215)
Q Consensus 62 ~~i~~~~~~~~PilGI 77 (215)
+.++++.+.++|+.-+
T Consensus 77 ~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 77 DTINKAVDAGIPIVLF 92 (305)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCcEEEE
Confidence 3344555578887654
No 131
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=47.37 E-value=11 Score=28.42 Aligned_cols=48 Identities=13% Similarity=0.254 Sum_probs=27.9
Q ss_pred CEEEEEecCC----------ChHHHHHH----HHHCCCeEEE---ECCC-CC--------CC-CcCEEEEcCCCc
Q 028010 1 MVVGVLALQG----------SFNEHIAA----LKRLGVKGVE---IRKP-DQ--------LQ-NVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~G----------~~~s~~~~----l~~~G~~v~~---~~~~-~~--------l~-~~d~lil~GG~~ 48 (215)
|||+||.... |-..+.+. |++.|+++.. +.+. +. ++ ++|.||.+||.+
T Consensus 6 ~~v~Ii~~GdEl~~G~i~D~n~~~l~~~~~~~l~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g 80 (167)
T 2g2c_A 6 IKSAIIVVSDRISTGTRENKALPLLQRLMSDELQDYSYELISEVVVPEGYDTVVEAIATALKQGARFIITAGGTG 80 (167)
T ss_dssp EEEEEEEECHHHHHTSSCCCHHHHHHHHHCC----CEEEEEEEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred cEEEEEEECCcccCCceeccHHHHHHHhHHhHHHHCCCEEeEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 3888887422 22346677 8899987643 3332 11 23 499999999854
No 132
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=46.84 E-value=47 Score=22.56 Aligned_cols=67 Identities=10% Similarity=0.090 Sum_probs=39.7
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCC------CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHc-CCc
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQL------QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKM-GKP 73 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l------~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~-~~P 73 (215)
||.|++-+-... .+.+.|+..|+++..+.+.++. ..+|.+++++.. ..+ +.+.|++. . ..|
T Consensus 20 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi~~~~~--g~~-------~~~~l~~~--~~~~~ 88 (137)
T 2pln_A 20 RVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVSDKN--ALS-------FVSRIKEK--HSSIV 88 (137)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEEECSTT--HHH-------HHHHHHHH--STTSE
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEEEcCcc--HHH-------HHHHHHhc--CCCcc
Confidence 666665544333 4567888899998877664321 357988833211 111 23455554 4 788
Q ss_pred EEEEeh
Q 028010 74 VWGTCA 79 (215)
Q Consensus 74 ilGIC~ 79 (215)
++.+..
T Consensus 89 ii~ls~ 94 (137)
T 2pln_A 89 VLVSSD 94 (137)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 888764
No 133
>1ehs_A STB, heat-stable enterotoxin B; disulfide; NMR {Escherichia coli} SCOP: g.2.1.1
Probab=46.79 E-value=3.1 Score=23.87 Aligned_cols=14 Identities=21% Similarity=0.465 Sum_probs=11.7
Q ss_pred EEEEehHHHHHHHh
Q 028010 74 VWGTCAGLIFLANK 87 (215)
Q Consensus 74 ilGIC~G~QlLa~~ 87 (215)
..|-|+|+|++..+
T Consensus 32 tagacfgaqimvaa 45 (48)
T 1ehs_A 32 TAGACFGAQIMVAA 45 (48)
T ss_dssp SCCTTTTTHHHHTT
T ss_pred ccccccchhHhhhc
Confidence 56889999999765
No 134
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=46.48 E-value=23 Score=26.58 Aligned_cols=45 Identities=9% Similarity=-0.087 Sum_probs=29.5
Q ss_pred CEEEEEecCC--ChH----HHHHHHHH-CCCeEEEECCCC----CCCCcCEEEEcC
Q 028010 1 MVVGVLALQG--SFN----EHIAALKR-LGVKGVEIRKPD----QLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~G--~~~----s~~~~l~~-~G~~v~~~~~~~----~l~~~d~lil~G 45 (215)
|||.|+.... +-. .+.+.++. .|+++++++..+ ++.++|+||+..
T Consensus 5 ~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~~~~~l~~aD~ii~gs 60 (188)
T 2ark_A 5 GKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEATKEDVLWADGLAVGS 60 (188)
T ss_dssp EEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTCCHHHHHHCSEEEEEE
T ss_pred CEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhCCHHHHHhCCEEEEEe
Confidence 3888887643 222 24556676 788888876432 355789998854
No 135
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=45.91 E-value=1.1e+02 Score=24.26 Aligned_cols=67 Identities=21% Similarity=0.202 Sum_probs=40.1
Q ss_pred EEEEEecC--CChH-----HHHHHHHHCCCeEEEECCCCC-------C-----CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQ--GSFN-----EHIAALKRLGVKGVEIRKPDQ-------L-----QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~--G~~~-----s~~~~l~~~G~~v~~~~~~~~-------l-----~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-. ..+. .+.+++++.|+++.+.....+ + .++|+||+.+...... .+
T Consensus 5 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~---------~~ 75 (330)
T 3uug_A 5 SVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTL---------SD 75 (330)
T ss_dssp EEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGGG---------HH
T ss_pred EEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchhH---------HH
Confidence 57776642 2333 356778889999887754321 1 3689999987543221 23
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++.+.+.++|+.-+
T Consensus 76 ~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 76 VLKQAGEQGIKVIAY 90 (330)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 344555578887654
No 136
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=44.92 E-value=26 Score=32.07 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=30.3
Q ss_pred HHHHHHHHCCCeEEEECCCCCCCCcCEEEEcCCC
Q 028010 14 EHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGE 47 (215)
Q Consensus 14 s~~~~l~~~G~~v~~~~~~~~l~~~d~lil~GG~ 47 (215)
...++|.++|+.+.++...+++++|+.||+|.-.
T Consensus 429 ~~y~al~~~g~~vd~v~~~~~l~~y~lvv~P~~~ 462 (645)
T 1kwg_A 429 LFYSALRRLGLDVDVVPPGASLRGYAFAVVPSLP 462 (645)
T ss_dssp HHHHHHHTTTCCEEEECTTSCCTTCSEEEESCCS
T ss_pred HHHHHHHHhCCCeeEECCCCCcccCCEEEEechh
Confidence 4578999999999999988889999999999854
No 137
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=44.85 E-value=16 Score=28.13 Aligned_cols=47 Identities=17% Similarity=0.117 Sum_probs=30.7
Q ss_pred EEEEEecC-----C----ChHHHHHHHHHCCCeEEE---ECCC-C--------CC-CCcCEEEEcCCCc
Q 028010 2 VVGVLALQ-----G----SFNEHIAALKRLGVKGVE---IRKP-D--------QL-QNVSSLIIPGGES 48 (215)
Q Consensus 2 ~v~il~~~-----G----~~~s~~~~l~~~G~~v~~---~~~~-~--------~l-~~~d~lil~GG~~ 48 (215)
||+||... | |-..+...|++.|+++.. +.+. + .+ .++|.||.+||.+
T Consensus 32 rvaIistGdEl~~G~~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts 100 (185)
T 3rfq_A 32 RALVVVVDDRTAHGDEDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTG 100 (185)
T ss_dssp EEEEEEECHHHHTTCCCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred EEEEEEECcccCCCCcCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 78887742 2 122467789999988654 3332 1 12 4789999999854
No 138
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=44.68 E-value=30 Score=27.61 Aligned_cols=45 Identities=22% Similarity=0.158 Sum_probs=33.5
Q ss_pred CEEEEEecCCChHH-HHHHHHHCCCeEEEE-CCC------------CCCCCcCEEEEcC
Q 028010 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEI-RKP------------DQLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~G~~~s-~~~~l~~~G~~v~~~-~~~------------~~l~~~d~lil~G 45 (215)
|||.|.--.|-..+ +++.|.+.|.+|+.+ +.+ +.++++|.+|=.-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccCCCEEEEec
Confidence 99888877776765 678999999998775 322 2467889988543
No 139
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=43.94 E-value=1.1e+02 Score=23.48 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=40.0
Q ss_pred EEEEEec--CCChH-----HHHHHHHHCCCeEEEECC--CCC-------C-----CC-cCEEEEcCCCcchHHHHHhhCC
Q 028010 2 VVGVLAL--QGSFN-----EHIAALKRLGVKGVEIRK--PDQ-------L-----QN-VSSLIIPGGESTTMARLAEYHN 59 (215)
Q Consensus 2 ~v~il~~--~G~~~-----s~~~~l~~~G~~v~~~~~--~~~-------l-----~~-~d~lil~GG~~~~~~~l~~~~~ 59 (215)
||+++.- ...+. .+.+++++.|+++.+... ..+ + .+ +|+||+.+......
T Consensus 2 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~-------- 73 (276)
T 3ksm_A 2 KLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDL-------- 73 (276)
T ss_dssp EEEEECSCSSSTHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTT--------
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHH--------
Confidence 6788764 22222 356677888999988753 121 1 25 99999987432211
Q ss_pred HHHHHHHHHHcCCcEEEE
Q 028010 60 LFPALREFVKMGKPVWGT 77 (215)
Q Consensus 60 l~~~i~~~~~~~~PilGI 77 (215)
.+.++.+.+.++|+..+
T Consensus 74 -~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 74 -TPSVAQYRARNIPVLVV 90 (276)
T ss_dssp -HHHHHHHHHTTCCEEEE
T ss_pred -HHHHHHHHHCCCcEEEE
Confidence 23344455578887765
No 140
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=42.23 E-value=30 Score=28.61 Aligned_cols=31 Identities=19% Similarity=0.046 Sum_probs=24.9
Q ss_pred CEEEEEecCCC-----hHHHHHHHHHCCCeEEEECC
Q 028010 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~G~-----~~s~~~~l~~~G~~v~~~~~ 31 (215)
|||.++.+.+. ...+.++|+++|.+|+++..
T Consensus 23 MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~ 58 (400)
T 4amg_A 23 MRALFITSPGLSHILPTVPLAQALRALGHEVRYATG 58 (400)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 89999887652 33678999999999998764
No 141
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=41.95 E-value=80 Score=25.94 Aligned_cols=15 Identities=13% Similarity=0.348 Sum_probs=12.3
Q ss_pred CCCCCcCEEEEcCCC
Q 028010 33 DQLQNVSSLIIPGGE 47 (215)
Q Consensus 33 ~~l~~~d~lil~GG~ 47 (215)
+++.++|.+|++.|.
T Consensus 65 ~~~~~aDvVvitAG~ 79 (294)
T 2x0j_A 65 SLLKGSEIIVVTAGL 79 (294)
T ss_dssp GGGTTCSEEEECCCC
T ss_pred HHhCCCCEEEEecCC
Confidence 456789999999984
No 142
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=41.79 E-value=1.1e+02 Score=24.82 Aligned_cols=67 Identities=16% Similarity=0.056 Sum_probs=40.2
Q ss_pred EEEEEecC--C-ChH-----HHHHHHHHCCCeEEEECCCCC-----------C---CCcCEEEEcCCCcchHHHHHhhCC
Q 028010 2 VVGVLALQ--G-SFN-----EHIAALKRLGVKGVEIRKPDQ-----------L---QNVSSLIIPGGESTTMARLAEYHN 59 (215)
Q Consensus 2 ~v~il~~~--G-~~~-----s~~~~l~~~G~~v~~~~~~~~-----------l---~~~d~lil~GG~~~~~~~l~~~~~ 59 (215)
+|+++.-. . .|. .+.+++++.|+++.+.....+ + .++|+||+.+... ..
T Consensus 5 ~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~~~~-~~-------- 75 (350)
T 3h75_A 5 SVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVNEQY-VA-------- 75 (350)
T ss_dssp EEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEECCSS-HH--------
T ss_pred EEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeCchh-hH--------
Confidence 78887643 2 222 345677788999888754321 1 3799999975221 11
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 028010 60 LFPALREFVKMGKPVWGTC 78 (215)
Q Consensus 60 l~~~i~~~~~~~~PilGIC 78 (215)
.+.++.+.+.++|+.-+.
T Consensus 76 -~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 76 -PQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp -HHHHHHHTTSCCEEEEEE
T ss_pred -HHHHHHHHhCCCcEEEEc
Confidence 233445556788887664
No 143
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=41.75 E-value=55 Score=27.06 Aligned_cols=78 Identities=14% Similarity=0.020 Sum_probs=45.9
Q ss_pred EEEEEecC--CC---hHHHHHHHHHCCCeEEEECC--CCC-------C--CCcCEEEEcCCCcchHHHHHhhCCHHHHHH
Q 028010 2 VVGVLALQ--GS---FNEHIAALKRLGVKGVEIRK--PDQ-------L--QNVSSLIIPGGESTTMARLAEYHNLFPALR 65 (215)
Q Consensus 2 ~v~il~~~--G~---~~s~~~~l~~~G~~v~~~~~--~~~-------l--~~~d~lil~GG~~~~~~~l~~~~~l~~~i~ 65 (215)
|++|+..+ |. +..+.+.|++.|+++.+... +.+ + .++|.||+.||-++..+- ++
T Consensus 31 ~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~~~~~~~~~~~d~vvv~GGDGTl~~v----------~~ 100 (332)
T 2bon_A 31 ASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEV----------ST 100 (332)
T ss_dssp CEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEEESHHHHHHH----------HH
T ss_pred eEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcchHHHHHHHHHhcCCCEEEEEccchHHHHH----------HH
Confidence 67777753 22 23567788899998876542 221 1 358999999996654322 22
Q ss_pred HHH----HcCCcEEEEehHH-HHHHHhhc
Q 028010 66 EFV----KMGKPVWGTCAGL-IFLANKAV 89 (215)
Q Consensus 66 ~~~----~~~~PilGIC~G~-QlLa~~~~ 89 (215)
... ..+.|+..|=+|- =.++..++
T Consensus 101 ~l~~~~~~~~~plgiiP~Gt~N~fa~~l~ 129 (332)
T 2bon_A 101 ALIQCEGDDIPALGILPLGTANDFATSVG 129 (332)
T ss_dssp HHHHCCSSCCCEEEEEECSSSCHHHHHTT
T ss_pred HHhhcccCCCCeEEEecCcCHHHHHHhcC
Confidence 222 3567877773443 33565554
No 144
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=40.74 E-value=1.2e+02 Score=23.15 Aligned_cols=66 Identities=15% Similarity=0.167 Sum_probs=38.7
Q ss_pred EEEEEecCCC--hH-----HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQGS--FN-----EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~G~--~~-----s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-.-+ +. .+.+++++.|+++.+.....+ + .++|++|+.+...... +
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~----------~ 73 (272)
T 3o74_A 4 TLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPED----------D 73 (272)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSC----------C
T ss_pred EEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccccH----------H
Confidence 5777764332 22 356678889999888764321 1 4789999977542111 1
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++.+.+.++|+.-+
T Consensus 74 ~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 74 SYRELQDKGLPVIAI 88 (272)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 122333468887655
No 145
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=40.71 E-value=30 Score=25.93 Aligned_cols=31 Identities=23% Similarity=0.032 Sum_probs=19.4
Q ss_pred CEEEEEecC-CChH----HHHHHHHHCCCeEEEECC
Q 028010 1 MVVGVLALQ-GSFN----EHIAALKRLGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~-G~~~----s~~~~l~~~G~~v~~~~~ 31 (215)
|||.|+... |+-. .+.+.+++.|+++++++.
T Consensus 5 mkilii~~S~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 5 PNILVLFYGYGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred cEEEEEEeCccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 588888876 1111 234556667898877653
No 146
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=40.14 E-value=32 Score=26.15 Aligned_cols=31 Identities=13% Similarity=0.120 Sum_probs=20.6
Q ss_pred CEEEEEecC--CChH----HHHHHHHHCCCeEEEECC
Q 028010 1 MVVGVLALQ--GSFN----EHIAALKRLGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~--G~~~----s~~~~l~~~G~~v~~~~~ 31 (215)
|||.|+... |+-. .+.+.+++.|+++++++.
T Consensus 7 mkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 7 VKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 589888874 3322 245667778998887753
No 147
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=40.00 E-value=79 Score=21.85 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=40.4
Q ss_pred CEEEEEecCCChHH-----HHHHHHHCCCeEEEEC--CC---CCCCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHH-
Q 028010 1 MVVGVLALQGSFNE-----HIAALKRLGVKGVEIR--KP---DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVK- 69 (215)
Q Consensus 1 m~v~il~~~G~~~s-----~~~~l~~~G~~v~~~~--~~---~~l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~- 69 (215)
|||.++=-.|-=.| ..++.++.|+++.+.. .. +.++++|.+++..=.... .+.+++..+
T Consensus 7 mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~----------~~~ik~~~~~ 76 (108)
T 3nbm_A 7 LKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSY----------YREMKVDAER 76 (108)
T ss_dssp EEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGG----------HHHHHHHHTT
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHH----------HHHHHHHhhh
Confidence 57777777774332 3566777899888743 22 334679998884211111 233444443
Q ss_pred cCCcEEEEe
Q 028010 70 MGKPVWGTC 78 (215)
Q Consensus 70 ~~~PilGIC 78 (215)
.++|+.-|=
T Consensus 77 ~~ipV~vI~ 85 (108)
T 3nbm_A 77 LGIQIVATR 85 (108)
T ss_dssp TTCEEEECC
T ss_pred cCCcEEEeC
Confidence 489998775
No 148
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=39.84 E-value=40 Score=24.32 Aligned_cols=28 Identities=11% Similarity=0.122 Sum_probs=18.7
Q ss_pred EEEEEec--CCChHHHHHHH-HHC-CCeEEEE
Q 028010 2 VVGVLAL--QGSFNEHIAAL-KRL-GVKGVEI 29 (215)
Q Consensus 2 ~v~il~~--~G~~~s~~~~l-~~~-G~~v~~~ 29 (215)
||+|+-+ .|+-..+++.+ +.+ +.++..+
T Consensus 5 kilIvY~S~tGnT~~iA~~Ia~~l~~~~~~~i 36 (151)
T 3edo_A 5 KTLILYYSWSGETKKMAEKINSEIKDSELKEV 36 (151)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHSTTCEEEEC
T ss_pred cEEEEEECCCCcHHHHHHHHHHhccCCCEEEE
Confidence 8888887 45555677777 555 7765443
No 149
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=39.83 E-value=22 Score=26.75 Aligned_cols=31 Identities=6% Similarity=-0.173 Sum_probs=19.3
Q ss_pred CEEEEEecC----CChHHHHHHHHH---CCCeEEEECC
Q 028010 1 MVVGVLALQ----GSFNEHIAALKR---LGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~----G~~~s~~~~l~~---~G~~v~~~~~ 31 (215)
|||.|+... |+-..+.+++.+ .|.++++++.
T Consensus 7 Mkilii~gS~r~~g~t~~la~~i~~~l~~g~~v~~~dl 44 (193)
T 1rtt_A 7 IKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADI 44 (193)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCC
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHhccCCCeEEEEeH
Confidence 688888764 433445555543 3788887764
No 150
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=39.13 E-value=24 Score=27.15 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=30.2
Q ss_pred CEEEEEecC-----C-----ChHHHHHHHHH---CCCeEEE---ECCC-C--------CCC--CcCEEEEcCCCc
Q 028010 1 MVVGVLALQ-----G-----SFNEHIAALKR---LGVKGVE---IRKP-D--------QLQ--NVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~-----G-----~~~s~~~~l~~---~G~~v~~---~~~~-~--------~l~--~~d~lil~GG~~ 48 (215)
|||+||... | |-..+...|++ .|+++.. +.+. + .++ ++|.||.+||.+
T Consensus 15 ~rv~IistGdEl~~g~~~D~n~~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVIttGGtg 89 (189)
T 1jlj_A 15 IRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTG 89 (189)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred CEEEEEEECCccCCCcccchHHHHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHHhhcCCCCEEEEcCCCC
Confidence 588888752 2 11235677887 8987654 3332 1 122 689999999854
No 151
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=38.93 E-value=31 Score=27.98 Aligned_cols=44 Identities=16% Similarity=0.133 Sum_probs=30.0
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCC----------------CCCCCcCEEEEc
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKP----------------DQLQNVSSLIIP 44 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~----------------~~l~~~d~lil~ 44 (215)
|||+|+.-+.......+.|++.|+++.+.... +.+.++|+|+++
T Consensus 6 m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~ 65 (293)
T 3d4o_A 6 KHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLP 65 (293)
T ss_dssp CEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEec
Confidence 68777755444446778899999998765421 224568999885
No 152
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=38.52 E-value=1.2e+02 Score=26.54 Aligned_cols=31 Identities=10% Similarity=-0.036 Sum_probs=25.8
Q ss_pred CEEEEEecCCChHH-HHHHHHHCCCeEEEECC
Q 028010 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~G~~~s-~~~~l~~~G~~v~~~~~ 31 (215)
|||.|+-+.|.-.+ +.+.|.+.|++|...+.
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~ 51 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDL 51 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEEcCHHHHHHHHHHHHhCCCeEEEECC
Confidence 47899999988787 88999999999887653
No 153
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=38.22 E-value=72 Score=26.85 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=24.4
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
.+++||+-| |.+..-.+ +.+.|+++.++|+||.-+
T Consensus 245 g~~GiVle~~G~Gn~p~~------~~~~l~~a~~~Gi~VV~~ 280 (334)
T 3nxk_A 245 GTKGIVVAGSGAGSIHKN------QKDVLKELLKKGLKVVVS 280 (334)
T ss_dssp TCCEEEEEEBTTTBCCHH------HHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEeeECCCCCcHH------HHHHHHHHHHCCCEEEEe
Confidence 479999977 54432222 357788888899998755
No 154
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=37.48 E-value=89 Score=22.74 Aligned_cols=73 Identities=14% Similarity=0.139 Sum_probs=40.0
Q ss_pred EEEEEec--CCChH----HHHHHHHHCCCeEEEECCCCC---------CCCcCEEEEcCCC-cchHHHHHhhCCHHHHHH
Q 028010 2 VVGVLAL--QGSFN----EHIAALKRLGVKGVEIRKPDQ---------LQNVSSLIIPGGE-STTMARLAEYHNLFPALR 65 (215)
Q Consensus 2 ~v~il~~--~G~~~----s~~~~l~~~G~~v~~~~~~~~---------l~~~d~lil~GG~-~~~~~~l~~~~~l~~~i~ 65 (215)
||.|+-+ .||=. .+.+.|+..|+++++++..+. +.++|+||+.... ...++ . ..+.+.+.
T Consensus 6 kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~d~ii~Gspty~g~~p-~---~~~l~~l~ 81 (159)
T 3fni_A 6 SIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAAVDLQELRELVGRCTGLVIGMSPAASAAS-I---QGALSTIL 81 (159)
T ss_dssp EEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSCCCHHHHHHHHHTEEEEEEECCBTTSHHH-H---HHHHHHHH
T ss_pred EEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCcCCHHHHHHHHHhCCEEEEEcCcCCCCcc-H---HHHHHHHH
Confidence 6777776 35433 345667788999887764322 2358988886532 11122 1 12233343
Q ss_pred HHHHcCCcEEEEe
Q 028010 66 EFVKMGKPVWGTC 78 (215)
Q Consensus 66 ~~~~~~~PilGIC 78 (215)
...-.++++.-++
T Consensus 82 ~~~~~~k~va~fg 94 (159)
T 3fni_A 82 GSVNEKQAVGIFE 94 (159)
T ss_dssp HHCCTTSEEEEEC
T ss_pred hhcccCCEEEEEE
Confidence 3222567766555
No 155
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=37.35 E-value=60 Score=27.16 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=23.6
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWG 76 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilG 76 (215)
.+++||+-| |.+..-.+ +.+.|+++.++|+||.-
T Consensus 241 g~~GiVle~~G~Gn~p~~------~~~~l~~a~~~Gi~VV~ 275 (327)
T 1o7j_A 241 GVKGIVYAGMGAGSVSVR------GIAGMRKALEKGVVVMR 275 (327)
T ss_dssp TCSEEEEEEBTTTBCCHH------HHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEeeECCCCCCHH------HHHHHHHHHHCCceEEE
Confidence 589999977 55433222 35778888889999764
No 156
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=36.91 E-value=1.4e+02 Score=23.20 Aligned_cols=67 Identities=19% Similarity=0.153 Sum_probs=39.4
Q ss_pred EEEEEecCCC--hH-----HHHHHHHHCCCeEEEECCCC---------CC--CCcCEEEEcCCCcchHHHHHhhCCHHHH
Q 028010 2 VVGVLALQGS--FN-----EHIAALKRLGVKGVEIRKPD---------QL--QNVSSLIIPGGESTTMARLAEYHNLFPA 63 (215)
Q Consensus 2 ~v~il~~~G~--~~-----s~~~~l~~~G~~v~~~~~~~---------~l--~~~d~lil~GG~~~~~~~l~~~~~l~~~ 63 (215)
+|+++.-.-+ +. .+.+++++.|+++.+....+ .+ .++|+||+.+...... ...
T Consensus 4 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~---------~~~ 74 (306)
T 8abp_A 4 KLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLG---------SAI 74 (306)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEECSCGGGH---------HHH
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCchhh---------HHH
Confidence 6777764322 22 34567788899987765431 01 4689999987533221 123
Q ss_pred HHHHHHcCCcEEEE
Q 028010 64 LREFVKMGKPVWGT 77 (215)
Q Consensus 64 i~~~~~~~~PilGI 77 (215)
++.+.+.++|+.-+
T Consensus 75 ~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 75 VAKARGYDMKVIAV 88 (306)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHCCCcEEEe
Confidence 44455578887654
No 157
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=36.76 E-value=39 Score=27.25 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=33.1
Q ss_pred CEEEEEecC-CCh---HHHHHHHHHCCCeEEEEC------CC--------CCCCCcCEEEEcCC
Q 028010 1 MVVGVLALQ-GSF---NEHIAALKRLGVKGVEIR------KP--------DQLQNVSSLIIPGG 46 (215)
Q Consensus 1 m~v~il~~~-G~~---~s~~~~l~~~G~~v~~~~------~~--------~~l~~~d~lil~GG 46 (215)
|||.|..-. ..- ..+.+.|+++|+++..+. .. .++.++|.||++..
T Consensus 22 ~~vlvtr~~~~~~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~l~~~l~~~~~~d~lifTS~ 85 (286)
T 1jr2_A 22 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSP 85 (286)
T ss_dssp CEEEEEESSCCCBTTBCHHHHHHHTTTCEEEEEECEEEEECCHHHHHHHHTCGGGCSEEEECCH
T ss_pred CEEEEEcCCCCCCCCCcHHHHHHHHCCCceEEEeeEEEecCCHHHHHHHHhCcccccEEEEeCH
Confidence 688888876 544 678899999999865432 11 23467999999874
No 158
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=36.53 E-value=63 Score=27.10 Aligned_cols=35 Identities=23% Similarity=0.442 Sum_probs=24.1
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
.+++||+-| |.+..-++ +.+.|+++.++|+||.-+
T Consensus 242 g~~GiVle~~G~Gn~p~~------~~~~l~~a~~~Gi~VV~~ 277 (332)
T 2wlt_A 242 HAKGVVIAGVGNGNVSAG------FLKAMQEASQMGVVIVRS 277 (332)
T ss_dssp TCSEEEEEEBTTTBCCHH------HHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeeECCCCCCHH------HHHHHHHHHHCCCEEEEE
Confidence 589999977 54433222 357788888899997643
No 159
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=35.52 E-value=1e+02 Score=25.49 Aligned_cols=16 Identities=19% Similarity=0.185 Sum_probs=12.2
Q ss_pred CCCCCCcCEEEEcCCC
Q 028010 32 PDQLQNVSSLIIPGGE 47 (215)
Q Consensus 32 ~~~l~~~d~lil~GG~ 47 (215)
.+++.++|.+|++.|.
T Consensus 64 ~~a~~~aDvVii~ag~ 79 (314)
T 3nep_X 64 YGPTEDSDVCIITAGL 79 (314)
T ss_dssp SGGGTTCSEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 3456789999999874
No 160
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=35.20 E-value=75 Score=25.18 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=28.4
Q ss_pred CEEEEEecCCC----h-----HHHHHHHHHCCCeEEEECCCCC----C--CCcCEEEE
Q 028010 1 MVVGVLALQGS----F-----NEHIAALKRLGVKGVEIRKPDQ----L--QNVSSLII 43 (215)
Q Consensus 1 m~v~il~~~G~----~-----~s~~~~l~~~G~~v~~~~~~~~----l--~~~d~lil 43 (215)
|||+||.-.-. + ..+.++++++|+++..++..+. + .++|.++.
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~~~~~~~~~~~~d~v~~ 60 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI 60 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSCGGGTTTTTEEEEEE
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCchHHHHhhccCCCEEEE
Confidence 47888764221 1 2577899999999998875422 2 35787765
No 161
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=35.09 E-value=1.6e+02 Score=23.06 Aligned_cols=67 Identities=19% Similarity=0.203 Sum_probs=38.1
Q ss_pred EEEEEecC-CC-hH-----HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQ-GS-FN-----EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~-G~-~~-----s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-. ++ +. .+.+++++.|+++.+.....+ + .++|+||+.+...... .+
T Consensus 4 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~---------~~ 74 (306)
T 2vk2_A 4 TVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGW---------EP 74 (306)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSC---------HH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhH---------HH
Confidence 78887653 22 11 245677888999887653221 1 3689999976432211 12
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++.+.+.++|+.-+
T Consensus 75 ~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 75 VLKEAKDAEIPVFLL 89 (306)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCCEEEe
Confidence 233333467887654
No 162
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=34.70 E-value=38 Score=25.48 Aligned_cols=70 Identities=11% Similarity=0.145 Sum_probs=41.6
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCCC------CCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCc
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQ------LQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKP 73 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~------l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~P 73 (215)
|||.|++-+-... .+...|+..|+++....+.++ -..+|.+++|+.. ..+ +.+.|++. ....|
T Consensus 1 m~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvilp~~~--g~~-------~~~~lr~~-~~~~~ 70 (223)
T 2hqr_A 1 MRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVSDKN--ALS-------FVSRIKEK-HSSIV 70 (223)
T ss_dssp CCEEEECSCHHHHHHHHHHHGGGTCCEEEESSHHHHHHHHTTSCCSEEEECCTT--HHH-------HHHHHHHH-CTTSE
T ss_pred CEEEEEcCCHHHHHHHHHHHHHCCcEEEEECCHHHHHHHHhcCCCCEEEeCCCC--HHH-------HHHHHHhC-CCCCc
Confidence 6777776554444 356678888999887665421 1358988844321 111 23455554 23788
Q ss_pred EEEEehH
Q 028010 74 VWGTCAG 80 (215)
Q Consensus 74 ilGIC~G 80 (215)
++-+..-
T Consensus 71 ii~lt~~ 77 (223)
T 2hqr_A 71 VLVSSDN 77 (223)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 8887643
No 163
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=34.42 E-value=65 Score=26.97 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=24.1
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
.+++||+-| |.+..-++ +.+.|+++.++|+||.-+
T Consensus 239 g~~GiVle~~G~Gn~p~~------~~~~l~~a~~~gi~VV~~ 274 (330)
T 1wsa_A 239 GAKGIIHAGMGNGNPFPL------TQNALEKAAKSGVVVARS 274 (330)
T ss_dssp TCSEEEEEEBTTTBCCHH------HHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeeECCCCCCHH------HHHHHHHHHHCCCEEEEE
Confidence 589999977 54433222 357788888899997643
No 164
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=34.34 E-value=19 Score=28.18 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=33.3
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECC-----CC-------CCCCcCEEEEcCC
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRK-----PD-------QLQNVSSLIIPGG 46 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~-----~~-------~l~~~d~lil~GG 46 (215)
|||.|..-...-..+.+.|++.|+++..+.. .+ .+.++|.||++..
T Consensus 2 ~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~~l~~~d~viftS~ 59 (240)
T 3mw8_A 2 MKLLLTRPEGKNAAMASALDALAIPYLVEPLLSVEAAAVTQAQLDELSRADILIFIST 59 (240)
T ss_dssp CCEEECSCTTSCHHHHHHHHHHTCCEEECCSCEEEECCCCHHHHHHHTTCSEEEECSH
T ss_pred CEEEEeCChHHhHHHHHHHHHCCCcEEEeCcEEEeccccHHHHHHHhcCCCEEEEECH
Confidence 6788877766667899999999998755421 11 2457999999854
No 165
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=33.91 E-value=1.7e+02 Score=22.77 Aligned_cols=52 Identities=17% Similarity=0.130 Sum_probs=30.6
Q ss_pred HHHHHHHCCCeEEEECCCC---C-------C--CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 15 HIAALKRLGVKGVEIRKPD---Q-------L--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 15 ~~~~l~~~G~~v~~~~~~~---~-------l--~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
+.+++++.|+++.+..... . + .++|+||+.+..... +.++.+.+.++|+.-+
T Consensus 32 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-----------~~~~~l~~~~iPvV~i 95 (288)
T 3gv0_A 32 ITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPND-----------PRVRFMTERNMPFVTH 95 (288)
T ss_dssp HHHHHTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTC-----------HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCCc-----------HHHHHHhhCCCCEEEE
Confidence 4566777899988765321 1 1 468999997643211 1223333468887654
No 166
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=33.57 E-value=47 Score=24.68 Aligned_cols=30 Identities=13% Similarity=0.014 Sum_probs=18.6
Q ss_pred CEEEEEecCC--ChHHHHHHHH-HCCCeEEEEC
Q 028010 1 MVVGVLALQG--SFNEHIAALK-RLGVKGVEIR 30 (215)
Q Consensus 1 m~v~il~~~G--~~~s~~~~l~-~~G~~v~~~~ 30 (215)
|||+|+-+.. +-..+++.+. .+|.++..+.
T Consensus 14 mkilIvY~S~tGnT~~vA~~Ia~~l~~d~~~I~ 46 (171)
T 4ici_A 14 SKILVAYFSATGTTARAAEKLGAAVGGDLYPIA 46 (171)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHTCEEEECC
T ss_pred CCEEEEEECCCChHHHHHHHHHHHhCCCeEEEe
Confidence 6889988744 4444555553 4577765543
No 167
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=33.40 E-value=71 Score=26.69 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=24.2
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
.+++||+-| |.+..-.+ +.+.|+++.++|+||.-+
T Consensus 235 g~~GiVl~~~G~Gn~p~~------~~~~l~~a~~~gi~VV~~ 270 (326)
T 1nns_A 235 GYDGIVSAGVGNGNLYKS------VFDTLATAAKTGTAVVRS 270 (326)
T ss_dssp TCSEEEEEEBTTTBCCHH------HHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeeECCCCCCHH------HHHHHHHHHHCCCEEEEE
Confidence 589999977 55433222 357788888899998643
No 168
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=33.26 E-value=1.5e+02 Score=22.86 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=27.7
Q ss_pred EEEEEec--CCCh-H----HHHHHHHHCCCeEEEECCCCC---C-C-CcCEEEEcCC
Q 028010 2 VVGVLAL--QGSF-N----EHIAALKRLGVKGVEIRKPDQ---L-Q-NVSSLIIPGG 46 (215)
Q Consensus 2 ~v~il~~--~G~~-~----s~~~~l~~~G~~v~~~~~~~~---l-~-~~d~lil~GG 46 (215)
+|+++.- ...+ . .+.+++++.|+++.+.....+ . . ++|+||+.+.
T Consensus 10 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~vdgiI~~~~ 66 (277)
T 3cs3_A 10 IIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKKSHLFIPEKMVDGAIILDW 66 (277)
T ss_dssp EEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEESTTTTTCCCTTTCSEEEEECT
T ss_pred EEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCCCCHHHHhhccccEEEEecC
Confidence 5777753 2222 2 345677888999877643211 1 1 7899999775
No 169
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=32.48 E-value=97 Score=25.18 Aligned_cols=78 Identities=12% Similarity=0.079 Sum_probs=46.3
Q ss_pred EEEEEecC--CC------hHHHHHHHHHCCCeEEEECC--CC-------C-CCCcCEEEEcCCCcchHHHHHhhCCHHHH
Q 028010 2 VVGVLALQ--GS------FNEHIAALKRLGVKGVEIRK--PD-------Q-LQNVSSLIIPGGESTTMARLAEYHNLFPA 63 (215)
Q Consensus 2 ~v~il~~~--G~------~~s~~~~l~~~G~~v~~~~~--~~-------~-l~~~d~lil~GG~~~~~~~l~~~~~l~~~ 63 (215)
|+.|+..+ |. +..+.+.|++.|+++.+... +. + .+++|.||+.||-++..+-
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~~~d~vv~~GGDGTl~~v---------- 79 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFEC---------- 79 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHTTTCSEEEEEECHHHHHHH----------
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHHHHHHhhcCCCEEEEEccchHHHHH----------
Confidence 77777764 32 22466778888998876532 21 1 2478999999986554221
Q ss_pred HHHHHH--cCCcEEEEehHHH-HHHHhhc
Q 028010 64 LREFVK--MGKPVWGTCAGLI-FLANKAV 89 (215)
Q Consensus 64 i~~~~~--~~~PilGIC~G~Q-lLa~~~~ 89 (215)
+..... .+.|+..|=+|-. .+++.++
T Consensus 80 ~~~l~~~~~~~~l~iiP~Gt~N~~ar~lg 108 (304)
T 3s40_A 80 TNGLAPLEIRPTLAIIPGGTCNDFSRTLG 108 (304)
T ss_dssp HHHHTTCSSCCEEEEEECSSCCHHHHHTT
T ss_pred HHHHhhCCCCCcEEEecCCcHHHHHHHcC
Confidence 222222 4567666666654 5666654
No 170
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=32.41 E-value=49 Score=26.84 Aligned_cols=43 Identities=16% Similarity=0.126 Sum_probs=28.6
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCC----------------CCCCCcCEEEE
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKP----------------DQLQNVSSLII 43 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~----------------~~l~~~d~lil 43 (215)
|||+|+.-+-......+.|.+.|+++.+...+ +.+.++|+|+.
T Consensus 8 mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~ 66 (300)
T 2rir_A 8 LKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIIL 66 (300)
T ss_dssp CEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEe
Confidence 57777754333345678899999998765421 12346899887
No 171
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=32.28 E-value=1.2e+02 Score=26.21 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=24.2
Q ss_pred CEEEEEecCCChHH-HHHHHHHCCCeEEEEC
Q 028010 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIR 30 (215)
Q Consensus 1 m~v~il~~~G~~~s-~~~~l~~~G~~v~~~~ 30 (215)
|||.|+-+.|.-.+ +.+.|.+.|++|...+
T Consensus 19 ~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D 49 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNEGYQISGSD 49 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHHhCCCEEEEEC
Confidence 47888888888776 7888888898887765
No 172
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=31.86 E-value=1.4e+02 Score=23.36 Aligned_cols=33 Identities=9% Similarity=0.045 Sum_probs=23.1
Q ss_pred HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCC
Q 028010 14 EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (215)
Q Consensus 14 s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG 46 (215)
.+.+++++.|+++.+.....+ + .++|+||+.+.
T Consensus 33 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~ 77 (295)
T 3hcw_A 33 GISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYS 77 (295)
T ss_dssp HHHHHHHTTTCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCC
T ss_pred HHHHHHHHCCCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCc
Confidence 356678888999887654321 1 47999999864
No 173
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=31.78 E-value=52 Score=27.32 Aligned_cols=31 Identities=13% Similarity=0.034 Sum_probs=24.8
Q ss_pred CEEEEEecCCC-----hHHHHHHHHHCCCeEEEECC
Q 028010 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~G~-----~~s~~~~l~~~G~~v~~~~~ 31 (215)
|||+++...+. ...+.++|++.|.+|+++..
T Consensus 21 MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 21 MRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 89999987542 33678999999999998866
No 174
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=31.14 E-value=2.2e+02 Score=23.46 Aligned_cols=28 Identities=14% Similarity=0.217 Sum_probs=19.1
Q ss_pred EEEEEecCCCh-HHHHHHHHHCCCeEEEE
Q 028010 2 VVGVLALQGSF-NEHIAALKRLGVKGVEI 29 (215)
Q Consensus 2 ~v~il~~~G~~-~s~~~~l~~~G~~v~~~ 29 (215)
||+|+-...-- ..+...++..+++++-+
T Consensus 28 rvgiiG~G~~~~~~~~~~~~~~~~~lvav 56 (361)
T 3u3x_A 28 RFAAVGLNHNHIYGQVNCLLRAGARLAGF 56 (361)
T ss_dssp EEEEECCCSTTHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECcCHHHHHHHHHHhhcCCcEEEEE
Confidence 89999875422 24566777788887654
No 175
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=30.66 E-value=1.6e+02 Score=23.96 Aligned_cols=16 Identities=13% Similarity=0.262 Sum_probs=12.3
Q ss_pred CCCCCCcCEEEEcCCC
Q 028010 32 PDQLQNVSSLIIPGGE 47 (215)
Q Consensus 32 ~~~l~~~d~lil~GG~ 47 (215)
.+.+.++|.+|++.|.
T Consensus 64 ~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 64 YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp GGGGTTCSEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 3456789999998874
No 176
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=30.54 E-value=63 Score=26.05 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=24.6
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCeEEEECCC
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKP 32 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~v~~~~~~ 32 (215)
|||+|+.-. .-..+.++++++|+++..+...
T Consensus 3 m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 3 VRIATYASH-SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp SEEEEESST-THHHHHHHHHHTTCCEEEESCG
T ss_pred eEEEEECCh-hHHHHHHHHHhCCCEEEEEECC
Confidence 588888765 5557889999999999887643
No 177
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=29.76 E-value=20 Score=27.33 Aligned_cols=37 Identities=24% Similarity=0.435 Sum_probs=22.8
Q ss_pred hHHHHHHH----HHCCCeEEEECCCC----------CCCCcCEEEE-cCCCc
Q 028010 12 FNEHIAAL----KRLGVKGVEIRKPD----------QLQNVSSLII-PGGES 48 (215)
Q Consensus 12 ~~s~~~~l----~~~G~~v~~~~~~~----------~l~~~d~lil-~GG~~ 48 (215)
+.++.+.| .++|+++....... ..+++|+||| ||++.
T Consensus 55 L~dI~~~l~~~a~~~G~~l~~~QSN~EGeLId~Ih~A~~~~dgIIINPgAyT 106 (172)
T 3n8k_A 55 HDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLT 106 (172)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCCHHHHHHHHHHhhhcCcEEEECcchhh
Confidence 44444444 45799988775431 1135788888 88765
No 178
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=29.70 E-value=36 Score=28.69 Aligned_cols=42 Identities=14% Similarity=0.314 Sum_probs=29.9
Q ss_pred CCcCEEEE-cCC-CcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHH
Q 028010 36 QNVSSLII-PGG-ESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGL 81 (215)
Q Consensus 36 ~~~d~lil-~GG-~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~ 81 (215)
.++|.||+ ||+ +.+.++.|.- .++.+.|++ ..-|...||-.|
T Consensus 177 ~~AD~IvlgPGS~~TSI~P~Llv-~gi~~Ai~~---s~A~kV~v~Nl~ 220 (323)
T 2o2z_A 177 RKADVIVIGPGSLYTSVLPNLLV-PGICEAIKQ---STARKVYICNVM 220 (323)
T ss_dssp HHCSEEEECSSCTTTTHHHHHTS-TTHHHHHHH---CCSEEEEECCSB
T ss_pred HhCCEEEECCCCCHHHhcccccC-chHHHHHHh---CCCCEEEEcCCC
Confidence 46899998 555 3566776643 566666655 678999999874
No 179
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=29.64 E-value=31 Score=26.69 Aligned_cols=48 Identities=10% Similarity=0.189 Sum_probs=29.8
Q ss_pred CEEEEEecCC----------ChHHHHHHHHHCCCe--EE---EECCC-CC--------CC--CcCEEEEcCCCc
Q 028010 1 MVVGVLALQG----------SFNEHIAALKRLGVK--GV---EIRKP-DQ--------LQ--NVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~G----------~~~s~~~~l~~~G~~--v~---~~~~~-~~--------l~--~~d~lil~GG~~ 48 (215)
|||+||.... |-..+.+.|++.|++ +. ++.+. +. ++ ++|.||.+||.+
T Consensus 4 ~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg 77 (195)
T 1di6_A 4 LRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTG 77 (195)
T ss_dssp EEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred CEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3888887532 122467789999986 32 33332 11 22 589999999854
No 180
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=29.52 E-value=1e+02 Score=26.98 Aligned_cols=35 Identities=31% Similarity=0.445 Sum_probs=24.1
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
.+++||+-| |.+..-. .+.+.|+++.++|+||.-.
T Consensus 325 g~~GiVleg~G~Gn~p~------~~~~~l~~a~~~Gi~VV~~ 360 (435)
T 2d6f_A 325 GYRGIVIEGTGLGHCPD------TLIPVIGEAHDMGVPVAMT 360 (435)
T ss_dssp TCSEEEEEEBTTTBCCG------GGHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEecCCCCCcCH------HHHHHHHHHHhCCCEEEEe
Confidence 479999977 5443322 2357788888899998644
No 181
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=29.45 E-value=2.3e+02 Score=23.00 Aligned_cols=29 Identities=21% Similarity=0.245 Sum_probs=21.6
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEE
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEI 29 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~ 29 (215)
|||+|+-..|... .+.++++..+.+++-+
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav 33 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSA 33 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEE
Confidence 4999999976443 5778888888876544
No 182
>3c3d_A 2-phospho-L-lactate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FO1; 2.50A {Methanosarcina mazei GO1} PDB: 2ffe_A* 3c3e_A* 3cgw_A
Probab=29.01 E-value=20 Score=30.13 Aligned_cols=39 Identities=13% Similarity=0.172 Sum_probs=25.5
Q ss_pred CCCcCEEEE-cCC-CcchHHHHHhhCCHHHHHHHHHHcCCcEEEEeh
Q 028010 35 LQNVSSLII-PGG-ESTTMARLAEYHNLFPALREFVKMGKPVWGTCA 79 (215)
Q Consensus 35 l~~~d~lil-~GG-~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~ 79 (215)
+.++|.||+ ||+ +.+.++.|.- +++.+.| ++. |+..||-
T Consensus 181 I~~AD~IvlgPGS~~TSI~P~Llv-~gi~~Al----~~s-~kV~v~n 221 (311)
T 3c3d_A 181 FEKEENILIGPSNPITSIGPIISL-PGMRELL----KKK-KVVAVSP 221 (311)
T ss_dssp HHHCCEEEECSSCTTTTSHHHHHS-TTHHHHH----HTS-EEEEECC
T ss_pred HHhCCEEEECCCCCHHHHhhhcCc-hhHHHHH----HcC-CEEEEcc
Confidence 356899998 555 3566777643 4555544 444 9999995
No 183
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=28.97 E-value=83 Score=24.45 Aligned_cols=44 Identities=14% Similarity=0.112 Sum_probs=30.7
Q ss_pred EEEEEecCCChH--HHHHHHHHCCCeEEEECCCCC----------CCCcCEEEEcC
Q 028010 2 VVGVLALQGSFN--EHIAALKRLGVKGVEIRKPDQ----------LQNVSSLIIPG 45 (215)
Q Consensus 2 ~v~il~~~G~~~--s~~~~l~~~G~~v~~~~~~~~----------l~~~d~lil~G 45 (215)
.|+||....+.. .+.++++++|+++..++..+. +.++|.++++.
T Consensus 1 mI~il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 56 (280)
T 1uc8_A 1 MLAILYDRIRPDERMLFERAEALGLPYKKVYVPALPMVLGERPKELEGVTVALERC 56 (280)
T ss_dssp CEEEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCCEETTBCCGGGTTCCEEEECC
T ss_pred CEEEEecCCCHHHHHHHHHHHHcCCcEEEEehhhceeeccCCCcccCCCCEEEECC
Confidence 188888765544 578999999999888753211 34678777765
No 184
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=28.96 E-value=35 Score=29.55 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=23.6
Q ss_pred HHHHHHHHCCCeEEE---ECCC-CC--------CCCcCEEEEcCCCcc
Q 028010 14 EHIAALKRLGVKGVE---IRKP-DQ--------LQNVSSLIIPGGEST 49 (215)
Q Consensus 14 s~~~~l~~~G~~v~~---~~~~-~~--------l~~~d~lil~GG~~~ 49 (215)
.+...|++.|+++.. +.+. +. ++++|.||.+||.+.
T Consensus 211 ~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlVittGG~s~ 258 (402)
T 1uz5_A 211 ALCDAINELGGEGIFMGVARDDKESLKALIEKAVNVGDVVVISGGASG 258 (402)
T ss_dssp HHHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHHCSEEEEECCC--
T ss_pred HHHHHHHhCCCeEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEcCCCCC
Confidence 467789999998754 3332 11 236899999998653
No 185
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=28.37 E-value=78 Score=26.62 Aligned_cols=45 Identities=11% Similarity=-0.010 Sum_probs=31.2
Q ss_pred CEEEEEecCCChHHHH-HHHHHCCCeEEEECCC--C----CCCCcCEEEEcC
Q 028010 1 MVVGVLALQGSFNEHI-AALKRLGVKGVEIRKP--D----QLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~G~~~s~~-~~l~~~G~~v~~~~~~--~----~l~~~d~lil~G 45 (215)
|||.++.......... +.++..|+++...... + .+.++|+|++.+
T Consensus 2 mki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~ 53 (343)
T 2yq5_A 2 TKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQALTSATVDLAEGCSSVSLKP 53 (343)
T ss_dssp CEEEEESCCGGGHHHHHHHHHHHTCEEEEESSCCSTTGGGGGTTCSEEEECC
T ss_pred ceEEEEecCcccHHHHHHHHHhCCeEEEECCCCCCHHHHHHhcCCcEEEEcC
Confidence 6999999766555554 4556779998876532 2 246789988865
No 186
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=28.10 E-value=66 Score=26.62 Aligned_cols=31 Identities=19% Similarity=0.043 Sum_probs=24.0
Q ss_pred CEEEEEecCCC-----hHHHHHHHHHCCCeEEEECC
Q 028010 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~G~-----~~s~~~~l~~~G~~v~~~~~ 31 (215)
|||+++...+. ...+.++|++.|.+|+++..
T Consensus 16 MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~ 51 (398)
T 4fzr_A 16 MRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAAS 51 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcC
Confidence 89999876541 23578999999999988754
No 187
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=27.94 E-value=56 Score=26.71 Aligned_cols=41 Identities=24% Similarity=0.321 Sum_probs=28.6
Q ss_pred EEEEEecCCChHHHHHHHHHCCCeEEEECC-CC-----------CCCCcCEEEEcCC
Q 028010 2 VVGVLALQGSFNEHIAALKRLGVKGVEIRK-PD-----------QLQNVSSLIIPGG 46 (215)
Q Consensus 2 ~v~il~~~G~~~s~~~~l~~~G~~v~~~~~-~~-----------~l~~~d~lil~GG 46 (215)
||+++ |.+ ..++.+++.+.++.+++. +. -++++|.++++|.
T Consensus 143 kV~vI---G~f-P~i~~~~~~~~~l~V~E~~p~~g~~p~~~~~~~lp~~D~viiTgs 195 (270)
T 3l5o_A 143 KVGVV---GHF-PHLESLLEPICDLSILEWSPEEGDYPLPASEFILPECDYVYITCA 195 (270)
T ss_dssp EEEEE---SCC-TTHHHHHTTTSEEEEEESSCCTTCEEGGGHHHHGGGCSEEEEETH
T ss_pred EEEEE---CCc-hhHHHHHhcCCCEEEEECCCCCCCCChhHHHHhhccCCEEEEEee
Confidence 67777 444 455677788888888753 21 1467999999986
No 188
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=27.94 E-value=2.1e+02 Score=22.09 Aligned_cols=46 Identities=20% Similarity=0.309 Sum_probs=29.8
Q ss_pred EEEEEecCCC--h-----HHHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCC
Q 028010 2 VVGVLALQGS--F-----NEHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGE 47 (215)
Q Consensus 2 ~v~il~~~G~--~-----~s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~ 47 (215)
+|+++.-.-. + ..+.+++++.|+++.+.....+ + .++|+||+.+..
T Consensus 10 ~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 74 (291)
T 3egc_A 10 VVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSE 74 (291)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCS
T ss_pred EEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5777763321 2 1356778889999988764321 1 478999998753
No 189
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=27.90 E-value=73 Score=26.18 Aligned_cols=31 Identities=23% Similarity=0.046 Sum_probs=24.1
Q ss_pred CEEEEEecCCC-----hHHHHHHHHHCCCeEEEECC
Q 028010 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~G~-----~~s~~~~l~~~G~~v~~~~~ 31 (215)
|||+++...+. ...+.++|++.|.+|.++..
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~ 37 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAP 37 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecC
Confidence 89999887542 22578999999999988764
No 190
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=27.46 E-value=72 Score=26.85 Aligned_cols=36 Identities=25% Similarity=0.479 Sum_probs=25.0
Q ss_pred CCcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 36 QNVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 36 ~~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
..+++||+-| |.+..- ..+.+.|+++.++|+||.-+
T Consensus 244 ~g~~GiVle~~G~Gn~p------~~~~~~l~~a~~~Gi~VV~~ 280 (337)
T 4pga_A 244 NGAKALIHAGTGNGSVS------SRVVPALQQLRKNGTQIIRS 280 (337)
T ss_dssp TTCSEEEEEEBTTTBCC------TTTHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEEEeCCCCCC------HHHHHHHHHHHHCCCEEEEe
Confidence 3589999977 544321 13467888888999998754
No 191
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=27.21 E-value=1.5e+02 Score=23.06 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=39.3
Q ss_pred EEEEEecCC--ChH-----HHHHHHHHCCCeEEEECCCC--C----------C--CCcCEEEEcCCCcchHHHHHhhCCH
Q 028010 2 VVGVLALQG--SFN-----EHIAALKRLGVKGVEIRKPD--Q----------L--QNVSSLIIPGGESTTMARLAEYHNL 60 (215)
Q Consensus 2 ~v~il~~~G--~~~-----s~~~~l~~~G~~v~~~~~~~--~----------l--~~~d~lil~GG~~~~~~~l~~~~~l 60 (215)
+|+++.-.- .+. .+.+++++.|+++.+..... + + .++|+||+.+......
T Consensus 7 ~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~--------- 77 (304)
T 3o1i_D 7 KICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHAY--------- 77 (304)
T ss_dssp EEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTSS---------
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhHH---------
Confidence 677776422 222 35567788899988876442 2 1 3689999986533211
Q ss_pred HHHHHHHHHcCCcEEEE
Q 028010 61 FPALREFVKMGKPVWGT 77 (215)
Q Consensus 61 ~~~i~~~~~~~~PilGI 77 (215)
.+.++++. .++|+.-+
T Consensus 78 ~~~~~~~~-~~iPvV~~ 93 (304)
T 3o1i_D 78 EHNLKSWV-GNTPVFAT 93 (304)
T ss_dssp TTTHHHHT-TTSCEEEC
T ss_pred HHHHHHHc-CCCCEEEe
Confidence 11233444 68888776
No 192
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=27.04 E-value=48 Score=28.75 Aligned_cols=35 Identities=26% Similarity=0.346 Sum_probs=24.2
Q ss_pred HHHHHHHHCCCeEEE---ECCC-CC--------CCCcCEEEEcCCCc
Q 028010 14 EHIAALKRLGVKGVE---IRKP-DQ--------LQNVSSLIIPGGES 48 (215)
Q Consensus 14 s~~~~l~~~G~~v~~---~~~~-~~--------l~~~d~lil~GG~~ 48 (215)
.+...|++.|+++.. +.+. +. ++++|.||.+||.+
T Consensus 208 ~L~~~l~~~G~~v~~~~iv~Dd~~~i~~al~~a~~~~DlvittGG~s 254 (411)
T 1g8l_A 208 AVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVS 254 (411)
T ss_dssp HHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEECSSSC
T ss_pred HHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhcCCEEEECCCCC
Confidence 467789999998754 3332 11 23689999999865
No 193
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=27.00 E-value=1.8e+02 Score=21.11 Aligned_cols=69 Identities=17% Similarity=0.081 Sum_probs=42.9
Q ss_pred EEEEEecCCChH---HHHHHHHHCCCeEEEEC-CCC-------CCCCcCEEEEcC--CCcchHHHHHhhCCHHHHHHHHH
Q 028010 2 VVGVLALQGSFN---EHIAALKRLGVKGVEIR-KPD-------QLQNVSSLIIPG--GESTTMARLAEYHNLFPALREFV 68 (215)
Q Consensus 2 ~v~il~~~G~~~---s~~~~l~~~G~~v~~~~-~~~-------~l~~~d~lil~G--G~~~~~~~l~~~~~l~~~i~~~~ 68 (215)
||-++...+++. .....|.+.|..+..+. +.. .+..-|.+|+-. |... . ..+.++.+.
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~---~------~~~~~~~ak 111 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLR---D------TVAALAGAA 111 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCH---H------HHHHHHHHH
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCH---H------HHHHHHHHH
Confidence 566666655544 34567788999998887 331 344557666543 3221 1 234556666
Q ss_pred HcCCcEEEEeh
Q 028010 69 KMGKPVWGTCA 79 (215)
Q Consensus 69 ~~~~PilGIC~ 79 (215)
+.|.++++|+-
T Consensus 112 ~~g~~vi~IT~ 122 (187)
T 3sho_A 112 ERGVPTMALTD 122 (187)
T ss_dssp HTTCCEEEEES
T ss_pred HCCCCEEEEeC
Confidence 68999999985
No 194
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=26.97 E-value=2e+02 Score=21.99 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=39.3
Q ss_pred EEEEEecCCC--hH-----HHHHHHHHCCCeEEEECCCCC------------CCCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQGS--FN-----EHIAALKRLGVKGVEIRKPDQ------------LQNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~G~--~~-----s~~~~l~~~G~~v~~~~~~~~------------l~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-.-+ +. .+.+++++.|+++.+.....+ -.++|+||+.+... . +
T Consensus 9 ~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~----------~ 76 (276)
T 3jy6_A 9 LIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--P----------Q 76 (276)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--H----------H
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--H----------H
Confidence 5777663221 22 356678889999888754321 14799999987543 1 1
Q ss_pred HHHHHHHcCCcEEEEe
Q 028010 63 ALREFVKMGKPVWGTC 78 (215)
Q Consensus 63 ~i~~~~~~~~PilGIC 78 (215)
.++...+.++|+.-+.
T Consensus 77 ~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 77 TVQEILHQQMPVVSVD 92 (276)
T ss_dssp HHHHHHTTSSCEEEES
T ss_pred HHHHHHHCCCCEEEEe
Confidence 2333444688877654
No 195
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=26.74 E-value=72 Score=25.30 Aligned_cols=30 Identities=10% Similarity=0.011 Sum_probs=22.4
Q ss_pred CEEEEEecCC------Ch--HHHHHHHHHCCCeEEEEC
Q 028010 1 MVVGVLALQG------SF--NEHIAALKRLGVKGVEIR 30 (215)
Q Consensus 1 m~v~il~~~G------~~--~s~~~~l~~~G~~v~~~~ 30 (215)
|||+||.-.- .+ ..+.++++++|+++.+++
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d 39 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYME 39 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEc
Confidence 4999988642 11 357889999999987765
No 196
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=26.59 E-value=2.4e+02 Score=22.34 Aligned_cols=67 Identities=24% Similarity=0.289 Sum_probs=37.7
Q ss_pred EEEEEecCCC-hH-----HHHHHHHHC-CCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQGS-FN-----EHIAALKRL-GVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~G~-~~-----s~~~~l~~~-G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-..+ +. .+.+++++. |+++.+.....+ + .++|+||+.+..... + .+
T Consensus 8 ~Igvi~~~~~~~~~~~~~gi~~~a~~~~g~~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~---~------~~ 78 (325)
T 2x7x_A 8 RIGVAQCSDDSWRHKMNDEILREAMFYNGVSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANEAAP---M------TP 78 (325)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSHHH---H------HH
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHH---H------HH
Confidence 6788765432 11 234566677 999887653321 1 468999997643221 1 12
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++.+.+.++|+..+
T Consensus 79 ~~~~~~~~~iPvV~~ 93 (325)
T 2x7x_A 79 IVEEAYQKGIPVILV 93 (325)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCeEEEe
Confidence 233444568887654
No 197
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=26.56 E-value=24 Score=29.98 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=26.5
Q ss_pred CCcCEEEE-cCC-CcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehH
Q 028010 36 QNVSSLII-PGG-ESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (215)
Q Consensus 36 ~~~d~lil-~GG-~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G 80 (215)
.++|.||+ ||+ +.+.++.|.- .++.+.|++ ..-|...||..
T Consensus 187 ~~AD~IvlgPGSlyTSI~P~Llv-~gi~~Ai~~---s~A~kV~V~Nl 229 (341)
T 2p0y_A 187 MAADQIVLGPGSLFTSILPNLTI-GNIGRAVCE---SDAEVVYICNI 229 (341)
T ss_dssp HHCSEEEECSSCCCCCCHHHHSS-HHHHHHHHH---CSSEEEEECCS
T ss_pred HhCCEEEECCCCCHHHhcccccC-ccHHHHHHh---CCCCEEEEeCC
Confidence 46899998 555 3566776642 234444433 57899999973
No 198
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=26.46 E-value=1.1e+02 Score=26.50 Aligned_cols=15 Identities=13% Similarity=0.060 Sum_probs=10.4
Q ss_pred CCCCCcCEEEEcCCC
Q 028010 33 DQLQNVSSLIIPGGE 47 (215)
Q Consensus 33 ~~l~~~d~lil~GG~ 47 (215)
+.+.++|.||.+-|.
T Consensus 67 ~~~~~~d~vV~spgi 81 (469)
T 1j6u_A 67 DNWYDPDLVIKTPAV 81 (469)
T ss_dssp TSCCCCSEEEECTTC
T ss_pred HHCCCCCEEEECCCc
Confidence 345578999986664
No 199
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=26.38 E-value=26 Score=29.58 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=26.2
Q ss_pred CCcCEEEE-cCC-CcchHHHHHhhCCHHHHHHHHHHcCCcEEEEeh
Q 028010 36 QNVSSLII-PGG-ESTTMARLAEYHNLFPALREFVKMGKPVWGTCA 79 (215)
Q Consensus 36 ~~~d~lil-~GG-~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~ 79 (215)
.++|.||+ ||+ +.+.++.|.- .++.+.|++ ..-|...||.
T Consensus 183 ~~AD~IvlgPGSl~TSI~P~Llv-~gi~~Ai~~---s~A~kV~v~N 224 (326)
T 2q7x_A 183 LESDMIVLGPGSLFTSILPNIVI-XEIGRALLE---TXAEIAYVCN 224 (326)
T ss_dssp HHCSEEEECSSCCCCCCHHHHTS-HHHHHHHHH---CSSEEEEECC
T ss_pred HhCCEEEECCCCCHHHHhhhhhh-ccHHHHHHh---ccCceEEecc
Confidence 46899998 555 3566776642 234444433 5789999996
No 200
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=26.16 E-value=52 Score=22.03 Aligned_cols=73 Identities=16% Similarity=0.054 Sum_probs=39.5
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCCC------CCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCc
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQ------LQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKP 73 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~------l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~P 73 (215)
+||.|++-+-... .+.+.|++.|+++....+.++ -..+|.+++-=..+. .+.+ .+.+.|++. ....|
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~-~~g~----~~~~~l~~~-~~~~~ 81 (130)
T 3eod_A 8 KQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPR-MNGL----KLLEHIRNR-GDQTP 81 (130)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC------CH----HHHHHHHHT-TCCCC
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCC-CCHH----HHHHHHHhc-CCCCC
Confidence 3677776544443 456789999999887765421 135788887432111 0111 123344432 23678
Q ss_pred EEEEeh
Q 028010 74 VWGTCA 79 (215)
Q Consensus 74 ilGIC~ 79 (215)
++-+..
T Consensus 82 ii~~t~ 87 (130)
T 3eod_A 82 VLVISA 87 (130)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 877764
No 201
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=26.06 E-value=71 Score=23.64 Aligned_cols=48 Identities=17% Similarity=0.345 Sum_probs=29.7
Q ss_pred CEEEEEecC-----CC-----hHHHHHHHHHC-----CCeEEE---ECCC-C-------C-C--CCcCEEEEcCCCc
Q 028010 1 MVVGVLALQ-----GS-----FNEHIAALKRL-----GVKGVE---IRKP-D-------Q-L--QNVSSLIIPGGES 48 (215)
Q Consensus 1 m~v~il~~~-----G~-----~~s~~~~l~~~-----G~~v~~---~~~~-~-------~-l--~~~d~lil~GG~~ 48 (215)
|||+||... |. -..+.+.|+.. |+++.. +.+. + . + .++|.||.+||.+
T Consensus 6 ~rv~IistGde~~~G~~~d~n~~~l~~~l~~~~~~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g 82 (167)
T 1uuy_A 6 YKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTG 82 (167)
T ss_dssp EEEEEEEECHHHHTTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred cEEEEEEECCcccCCCCccCcHHHHHHHHHhccccCCCcEEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 478888742 21 12345778877 987653 3332 1 1 2 3699999999864
No 202
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=25.78 E-value=82 Score=26.36 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=24.8
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHH-HcCCcEEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFV-KMGKPVWGT 77 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~-~~~~PilGI 77 (215)
.+++||+-| |.+..- ..+.+.|+++. ++|+||.-+
T Consensus 239 g~~GiVle~~G~Gn~p------~~~~~~l~~a~~~~gi~VV~~ 275 (331)
T 1agx_A 239 GVKAIIHAGTGNGSMA------NYLVPEVRKLHDEQGLQIVRS 275 (331)
T ss_dssp TCSEEEEEEBTTTBCC------TTHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEeeECCCCCC------HHHHHHHHHHHHcCCCEEEEE
Confidence 589999977 544321 23567888888 889997644
No 203
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=25.76 E-value=51 Score=22.07 Aligned_cols=43 Identities=9% Similarity=-0.103 Sum_probs=28.2
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCC------CCcCEEEEc
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQL------QNVSSLIIP 44 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l------~~~d~lil~ 44 (215)
||.|++-+-... .+.+.|++.|+++....+.++. ..+|.|++-
T Consensus 8 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d 57 (132)
T 3lte_A 8 RILVVDDDQAMAAAIERVLKRDHWQVEIAHNGFDAGIKLSTFEPAIMTLD 57 (132)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTCCSEEEEE
T ss_pred cEEEEECCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcCCCEEEEe
Confidence 666666544433 4567889999998877664321 357888773
No 204
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=25.54 E-value=1e+02 Score=27.02 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=24.0
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
.+++||+-| |.+..-. .+.+.|+++.++|+||.-.
T Consensus 328 g~~GiVleg~G~Gn~p~------~~~~~l~~a~~~Gi~VV~~ 363 (438)
T 1zq1_A 328 GYKGIVIEGTGLGHTPN------DIIPSIERAVEEGVAVCMT 363 (438)
T ss_dssp TCSEEEEEEBTTTBCCG------GGHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeeECCCCCCH------HHHHHHHHHHHCCCEEEEe
Confidence 489999977 5443322 2357788888899998643
No 205
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=25.52 E-value=2.4e+02 Score=21.88 Aligned_cols=68 Identities=15% Similarity=0.037 Sum_probs=39.2
Q ss_pred EEEEEecC--CChH-----HHHHHHHHCCC-eEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHH
Q 028010 2 VVGVLALQ--GSFN-----EHIAALKRLGV-KGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLF 61 (215)
Q Consensus 2 ~v~il~~~--G~~~-----s~~~~l~~~G~-~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~ 61 (215)
+|+++.-. ..+. .+.+++++.|+ ++.+.....+ + .++|+||+.+...... .
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~---------~ 74 (309)
T 2fvy_A 4 RIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAA---------G 74 (309)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHTCTTEEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGGH---------H
T ss_pred EEEEEeccCCcHHHHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcchh---------H
Confidence 57777632 2222 34567788898 8877654321 1 4689999976433211 1
Q ss_pred HHHHHHHHcCCcEEEEe
Q 028010 62 PALREFVKMGKPVWGTC 78 (215)
Q Consensus 62 ~~i~~~~~~~~PilGIC 78 (215)
+.++.+.+.++|+..+.
T Consensus 75 ~~~~~~~~~~iPvV~~~ 91 (309)
T 2fvy_A 75 TVIEKARGQNVPVVFFN 91 (309)
T ss_dssp HHHHHHHTTTCCEEEES
T ss_pred HHHHHHHHCCCcEEEec
Confidence 23334445788887654
No 206
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=25.48 E-value=49 Score=22.48 Aligned_cols=74 Identities=11% Similarity=0.006 Sum_probs=41.6
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCC------CCcCEEEEcCCCc--chHHHHHhhCCHHHHHHHH-HHcC
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQL------QNVSSLIIPGGES--TTMARLAEYHNLFPALREF-VKMG 71 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l------~~~d~lil~GG~~--~~~~~l~~~~~l~~~i~~~-~~~~ 71 (215)
||.|++-+-... .+.+.|++.|+++....+.++. ..+|.||+-=..+ +..+ +.+.|++. ....
T Consensus 8 ~iLivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~-------~~~~l~~~~~~~~ 80 (140)
T 3grc_A 8 RILICEDDPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNLPDQDGVS-------LIRALRRDSRTRD 80 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCCSSSCHHH-------HHHHHHTSGGGTT
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHH-------HHHHHHhCcccCC
Confidence 666666544434 4567889999998777654321 3588888732211 1111 12334331 1246
Q ss_pred CcEEEEehHHH
Q 028010 72 KPVWGTCAGLI 82 (215)
Q Consensus 72 ~PilGIC~G~Q 82 (215)
.|++-+..-..
T Consensus 81 ~~ii~~s~~~~ 91 (140)
T 3grc_A 81 LAIVVVSANAR 91 (140)
T ss_dssp CEEEEECTTHH
T ss_pred CCEEEEecCCC
Confidence 88888775543
No 207
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=25.40 E-value=21 Score=28.81 Aligned_cols=44 Identities=23% Similarity=0.250 Sum_probs=29.0
Q ss_pred CEEEEEecCC------ChH---HHHHHHHHCCCeEEEECCCC------CCCCcCEEEEc
Q 028010 1 MVVGVLALQG------SFN---EHIAALKRLGVKGVEIRKPD------QLQNVSSLIIP 44 (215)
Q Consensus 1 m~v~il~~~G------~~~---s~~~~l~~~G~~v~~~~~~~------~l~~~d~lil~ 44 (215)
|||+||.=.- +.. .+.++|++.|+++..++..+ .+.++|.++..
T Consensus 4 m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~D~v~~~ 62 (307)
T 3r5x_A 4 MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDIDFALLA 62 (307)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHHHHTTTCSEEEEC
T ss_pred cEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHHHhccCCCEEEEe
Confidence 7888887311 122 46678888999998886542 23578887763
No 208
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=25.32 E-value=47 Score=23.31 Aligned_cols=70 Identities=14% Similarity=0.015 Sum_probs=39.6
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCC------CCCcCEEEEcCCCc--chHHHHHhhCCHHHHHHHHHH-cC
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQ------LQNVSSLIIPGGES--TTMARLAEYHNLFPALREFVK-MG 71 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~------l~~~d~lil~GG~~--~~~~~l~~~~~l~~~i~~~~~-~~ 71 (215)
||.|++-+-... .+.+.|++.|+++....+.++ -..+|.|++-=..+ +..+ +.+.|++... ..
T Consensus 9 ~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~-------~~~~lr~~~~~~~ 81 (154)
T 3gt7_A 9 EILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYA-------LCRWLKGQPDLRT 81 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHH-------HHHHHHHSTTTTT
T ss_pred cEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHH-------HHHHHHhCCCcCC
Confidence 566665544333 456788899999887765421 13589888843211 1111 1334444221 46
Q ss_pred CcEEEEe
Q 028010 72 KPVWGTC 78 (215)
Q Consensus 72 ~PilGIC 78 (215)
.|++.+.
T Consensus 82 ~pii~~s 88 (154)
T 3gt7_A 82 IPVILLT 88 (154)
T ss_dssp SCEEEEE
T ss_pred CCEEEEE
Confidence 7888777
No 209
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=24.77 E-value=35 Score=22.82 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=27.9
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCC------CCcCEEEEc
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQL------QNVSSLIIP 44 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l------~~~d~lil~ 44 (215)
||.|++-+-... .+.+.|++.|+++..+.+.++. ..+|.+++-
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~D 54 (127)
T 3i42_A 5 QALIVEDYQAAAETFKELLEMLGFQADYVMSGTDALHAMSTRGYDAVFID 54 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTEEEEEESSHHHHHHHHHHSCCSEEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCCCEEEECCHHHHHHHHHhcCCCEEEEe
Confidence 566665444333 4667899999988877664321 358888874
No 210
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=24.77 E-value=63 Score=21.63 Aligned_cols=72 Identities=10% Similarity=0.005 Sum_probs=40.5
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEE-EECCCCCC------CCcCEEEEcCCCc--chHHHHHhhCCHHHHHHHHHHc
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGV-EIRKPDQL------QNVSSLIIPGGES--TTMARLAEYHNLFPALREFVKM 70 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~-~~~~~~~l------~~~d~lil~GG~~--~~~~~l~~~~~l~~~i~~~~~~ 70 (215)
|||.|++-+-... .+.+.|++.|+++. ...+.++. ..+|.+++-=..+ +..+ +.+.|++. ..
T Consensus 2 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~-------~~~~l~~~-~~ 73 (134)
T 3f6c_A 2 LNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQ-------VLETLRKR-QY 73 (134)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHH-------HHHHHHHT-TC
T ss_pred eEEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHH-------HHHHHHhc-CC
Confidence 3666666544433 46678999998876 56655432 3588888743221 1211 12344432 23
Q ss_pred CCcEEEEehH
Q 028010 71 GKPVWGTCAG 80 (215)
Q Consensus 71 ~~PilGIC~G 80 (215)
..|++-++.-
T Consensus 74 ~~~ii~~s~~ 83 (134)
T 3f6c_A 74 SGIIIIVSAK 83 (134)
T ss_dssp CSEEEEEECC
T ss_pred CCeEEEEeCC
Confidence 6788777653
No 211
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=24.54 E-value=78 Score=25.38 Aligned_cols=41 Identities=15% Similarity=0.263 Sum_probs=30.0
Q ss_pred EEEEEecCCChHHHHHHHHHCCCeEEEECC-CC--------------CCCCcCEEEEcCC
Q 028010 2 VVGVLALQGSFNEHIAALKRLGVKGVEIRK-PD--------------QLQNVSSLIIPGG 46 (215)
Q Consensus 2 ~v~il~~~G~~~s~~~~l~~~G~~v~~~~~-~~--------------~l~~~d~lil~GG 46 (215)
||+++ |.+..+.+.|++. .++.+++. ++ -++.+|.++++|+
T Consensus 118 kV~vI---G~~p~l~~~l~~~-~~v~V~d~~p~~~~~~~~~~~~e~~~l~~~D~v~iTGs 173 (249)
T 3npg_A 118 RIAII---GNMPPVVRTLKEK-YEVYVFERNMKLWDRDTYSDTLEYHILPEVDGIIASAS 173 (249)
T ss_dssp EEEEE---SCCHHHHHHHTTT-SEEEEECCSGGGCCSSEECGGGHHHHGGGCSEEEEETT
T ss_pred EEEEE---CCCHHHHHHHhcc-CCEEEEECCCcccCCCCCChhHHHhhhccCCEEEEEee
Confidence 56655 6667788899888 89888763 21 1357999999997
No 212
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=24.44 E-value=2.4e+02 Score=21.67 Aligned_cols=67 Identities=24% Similarity=0.265 Sum_probs=36.7
Q ss_pred EEEEEecCC-C-h-H----HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQG-S-F-N----EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~G-~-~-~----s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-.- + + . .+.+++++.|+++.+.....+ + .+.|+||+.+...... .+
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~---------~~ 73 (283)
T 2ioy_A 3 TIGLVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSDAV---------VT 73 (283)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSTTTT---------HH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCchhhh---------HH
Confidence 677775322 2 2 2 245567788999887653221 1 3689999965422111 12
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++...+.++|+.-+
T Consensus 74 ~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 74 AIKEANSKNIPVITI 88 (283)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCeEEEe
Confidence 233344467887544
No 213
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=24.37 E-value=2.8e+02 Score=22.36 Aligned_cols=29 Identities=24% Similarity=0.305 Sum_probs=21.6
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEE
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEI 29 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~ 29 (215)
|||+|+-..|... .+.++++..+.+++-+
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav 33 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVAS 33 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEE
Confidence 4999999977443 5778888888876544
No 214
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=23.96 E-value=86 Score=21.31 Aligned_cols=30 Identities=20% Similarity=0.191 Sum_probs=22.6
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECC
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRK 31 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~ 31 (215)
|+|+|+-. |... .+.+.|.+.|.++.+++.
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC
Confidence 78888876 6555 466888889998887754
No 215
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=23.94 E-value=1.5e+02 Score=24.63 Aligned_cols=27 Identities=22% Similarity=0.087 Sum_probs=17.5
Q ss_pred CEEEEEecCCChHHH-HHHHHHCCCeEEEE
Q 028010 1 MVVGVLALQGSFNEH-IAALKRLGVKGVEI 29 (215)
Q Consensus 1 m~v~il~~~G~~~s~-~~~l~~~G~~v~~~ 29 (215)
|||+||-. |...+. ++.|.+ ..++.+.
T Consensus 17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~ 44 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIG 44 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEEEE
T ss_pred cEEEEECC-CHHHHHHHHHHhc-CCCeEEE
Confidence 89999977 766654 455543 4566554
No 216
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=23.81 E-value=2.4e+02 Score=21.48 Aligned_cols=68 Identities=15% Similarity=0.146 Sum_probs=37.5
Q ss_pred CEEEEEecCC--ChH-----HHHHHHHHCCCeEEEECCCCC------------CCCcCEEEEcCCCcchHHHHHhhCCHH
Q 028010 1 MVVGVLALQG--SFN-----EHIAALKRLGVKGVEIRKPDQ------------LQNVSSLIIPGGESTTMARLAEYHNLF 61 (215)
Q Consensus 1 m~v~il~~~G--~~~-----s~~~~l~~~G~~v~~~~~~~~------------l~~~d~lil~GG~~~~~~~l~~~~~l~ 61 (215)
++|+++.-.- .|. .+.+++++.|+++.+.....+ -.+.|+||+.+...... .
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~---------~ 72 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAV---------G 72 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECCSSTTTT---------H
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHH---------H
Confidence 3677776432 222 345677788999877643211 13689999975432211 1
Q ss_pred HHHHHHHHcCCcEEEE
Q 028010 62 PALREFVKMGKPVWGT 77 (215)
Q Consensus 62 ~~i~~~~~~~~PilGI 77 (215)
+.++...+.++|+.-+
T Consensus 73 ~~~~~~~~~~iPvV~i 88 (271)
T 2dri_A 73 NAVKMANQANIPVITL 88 (271)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCcEEEe
Confidence 2233444467887644
No 217
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=23.70 E-value=2.2e+02 Score=22.64 Aligned_cols=67 Identities=13% Similarity=0.076 Sum_probs=37.9
Q ss_pred EEEEEecC--CChH-----HHHHHHHHCCCeEEEECCCCC----------C--CC--cCEEEEcCCCcchHHHHHhhCCH
Q 028010 2 VVGVLALQ--GSFN-----EHIAALKRLGVKGVEIRKPDQ----------L--QN--VSSLIIPGGESTTMARLAEYHNL 60 (215)
Q Consensus 2 ~v~il~~~--G~~~-----s~~~~l~~~G~~v~~~~~~~~----------l--~~--~d~lil~GG~~~~~~~l~~~~~l 60 (215)
+|+++.-. ..+. .+.+++++.|+++.+.....+ + .+ +|+||+.+......
T Consensus 7 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~~~~~~--------- 77 (332)
T 2rjo_A 7 TLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPNDSADA--------- 77 (332)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHHTCCEEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCSSHHHH---------
T ss_pred EEEEEecCCCcHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCCCHHHH---------
Confidence 67777642 2222 345677888999887654321 1 36 99999976533211
Q ss_pred HHHHHHHHHcCCcEEEE
Q 028010 61 FPALREFVKMGKPVWGT 77 (215)
Q Consensus 61 ~~~i~~~~~~~~PilGI 77 (215)
.+.++.+.+.++|+..+
T Consensus 78 ~~~~~~~~~~~iPvV~~ 94 (332)
T 2rjo_A 78 RVIVEACSKAGAYVTTI 94 (332)
T ss_dssp HHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHCCCeEEEE
Confidence 12233333457887655
No 218
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=23.23 E-value=1e+02 Score=20.61 Aligned_cols=69 Identities=9% Similarity=-0.075 Sum_probs=39.9
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEE-EECCCCCC------CCcCEEEEcCCCc---chHHHHHhhCCHHHHHHHHHHc
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGV-EIRKPDQL------QNVSSLIIPGGES---TTMARLAEYHNLFPALREFVKM 70 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~-~~~~~~~l------~~~d~lil~GG~~---~~~~~l~~~~~l~~~i~~~~~~ 70 (215)
||.|++-+-... .+.+.|+..|+++. ...+.++. ..+|.+++--..+ +..+ +.+.|++. .
T Consensus 11 ~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~-------~~~~l~~~--~ 81 (140)
T 3cg0_A 11 GVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVE-------TAARLAAG--C 81 (140)
T ss_dssp EEEEECCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHH-------HHHHHHHH--S
T ss_pred eEEEEECCHHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHH-------HHHHHHhC--C
Confidence 666665544333 45677888899988 46654321 2578888742211 1211 23445554 5
Q ss_pred CCcEEEEeh
Q 028010 71 GKPVWGTCA 79 (215)
Q Consensus 71 ~~PilGIC~ 79 (215)
..|++.++.
T Consensus 82 ~~~ii~ls~ 90 (140)
T 3cg0_A 82 NLPIIFITS 90 (140)
T ss_dssp CCCEEEEEC
T ss_pred CCCEEEEec
Confidence 789888764
No 219
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.20 E-value=60 Score=22.57 Aligned_cols=71 Identities=13% Similarity=0.056 Sum_probs=41.1
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCC----CC--CCcCEEEEcCCCc--chHHHHHhhCCHHHHHHHHHHcC
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPD----QL--QNVSSLIIPGGES--TTMARLAEYHNLFPALREFVKMG 71 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~----~l--~~~d~lil~GG~~--~~~~~l~~~~~l~~~i~~~~~~~ 71 (215)
|+|.|++-+-... .+.+.|+..|+++..+.+.+ .+ ..+|.+++--..+ +..+ +.+.|++. ...
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~-------~~~~l~~~-~~~ 75 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLA-------LFRKILAL-DPD 75 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSSCHHH-------HHHHHHHH-CTT
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHH-------HHHHHHhh-CCC
Confidence 4666666544333 45678889999988776532 12 3578888743322 1221 13344443 247
Q ss_pred CcEEEEeh
Q 028010 72 KPVWGTCA 79 (215)
Q Consensus 72 ~PilGIC~ 79 (215)
.|++.+..
T Consensus 76 ~pii~ls~ 83 (155)
T 1qkk_A 76 LPMILVTG 83 (155)
T ss_dssp SCEEEEEC
T ss_pred CCEEEEEC
Confidence 88888764
No 220
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=22.97 E-value=17 Score=27.09 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=25.9
Q ss_pred CEEEEEec--CCChHHHHHHHHH-CCC-eEEEEC--C--CCCCCCcCEEEEcC
Q 028010 1 MVVGVLAL--QGSFNEHIAALKR-LGV-KGVEIR--K--PDQLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~--~G~~~s~~~~l~~-~G~-~v~~~~--~--~~~l~~~d~lil~G 45 (215)
|||.|+-+ .||-..+++.+.+ ++. .+.+++ . ..++.++|.||+..
T Consensus 1 Mki~IvY~S~tGnT~~iA~~Ia~~l~~~~v~i~~~~~~~~~~l~~~d~ii~g~ 53 (175)
T 1ag9_A 1 AITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGI 53 (175)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHCTTTEEEEEGGGCCHHHHHTCSEEEEEC
T ss_pred CEEEEEEECCCchHHHHHHHHHHHhccCceEEEEcccCChhHhhhCCEEEEEE
Confidence 88888876 4454445555433 332 344433 2 23456899998864
No 221
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=22.95 E-value=36 Score=28.77 Aligned_cols=42 Identities=14% Similarity=0.287 Sum_probs=27.3
Q ss_pred CCcCEEEE-cCC-CcchHHHHHhhCCHHHHHHHHHHcCCcEEEEehHH
Q 028010 36 QNVSSLII-PGG-ESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGL 81 (215)
Q Consensus 36 ~~~d~lil-~GG-~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~G~ 81 (215)
.++|.||+ ||+ +.+.++.|.- .++.+.|++ ..-|...||-.+
T Consensus 176 ~~AD~IvlgPGS~~TSI~P~Llv-~gi~~Ai~~---s~A~kV~v~N~~ 219 (332)
T 2ppv_A 176 EQADLIVLGPGSLYTSVISNLCV-KGISEALLR---TSAPKLYVSNVM 219 (332)
T ss_dssp HHCSEEEECSSCCCCCCHHHHTS-HHHHHHHHH---CCSCEEEECCSB
T ss_pred HhCCEEEECCCCCHHHhcccccC-chHHHHHHh---CCCCEEEEcCCC
Confidence 46899998 555 3566666642 334444433 578999999876
No 222
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=22.90 E-value=3e+02 Score=22.17 Aligned_cols=29 Identities=10% Similarity=0.130 Sum_probs=18.9
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEE
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEI 29 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~ 29 (215)
|||+|+-...--. .+.+.|+..+++++-+
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav 34 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGV 34 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEE
Confidence 4899998743222 3566777778887543
No 223
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=22.78 E-value=2.7e+02 Score=21.55 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=28.3
Q ss_pred EEEEEecC--CChH-----HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCC
Q 028010 2 VVGVLALQ--GSFN-----EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (215)
Q Consensus 2 ~v~il~~~--G~~~-----s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG 46 (215)
+|+++.-+ ..+. .+.+++++.|+++.+.....+ + .++|+||+.+.
T Consensus 18 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 81 (289)
T 2fep_A 18 TVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGG 81 (289)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred eEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecC
Confidence 57777632 2222 345678889999877643221 1 46899999764
No 224
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=22.51 E-value=1.5e+02 Score=27.56 Aligned_cols=77 Identities=16% Similarity=0.060 Sum_probs=47.1
Q ss_pred CEEEEEecCC-Ch--------HHHHHHHHHCCCeEEEECCCCC-------CCCcCEEEEcCCCcc---hHHHHHhhCCHH
Q 028010 1 MVVGVLALQG-SF--------NEHIAALKRLGVKGVEIRKPDQ-------LQNVSSLIIPGGEST---TMARLAEYHNLF 61 (215)
Q Consensus 1 m~v~il~~~G-~~--------~s~~~~l~~~G~~v~~~~~~~~-------l~~~d~lil~GG~~~---~~~~l~~~~~l~ 61 (215)
|||.|++-+- .. ..+..+|++.|+++....+.++ -.++|.+|+-=..+. .++-+ .+.
T Consensus 1 m~ILiVdDd~~~~~~~~~~~~~~L~~~L~~~g~~v~~a~~g~~al~~~~~~~~~d~vilDi~lp~~~~~~~G~----~ll 76 (755)
T 2vyc_A 1 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQMEHPDEHQNVR----QLI 76 (755)
T ss_dssp CEEEEECCTTSTTSHHHHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTTCCCSEEEEECCCCSHHHHHHHH----HHH
T ss_pred CeEEEEeCCccccccccHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhcCCCCcEEEEeCCCCcccccccHH----HHH
Confidence 8898888764 33 4677899999999998876432 234899888422221 11111 134
Q ss_pred HHHHHHHHcCCcEEEEehHHH
Q 028010 62 PALREFVKMGKPVWGTCAGLI 82 (215)
Q Consensus 62 ~~i~~~~~~~~PilGIC~G~Q 82 (215)
+.||+. ..+.||+-+..=.+
T Consensus 77 ~~iR~~-~~~iPIi~lTa~~~ 96 (755)
T 2vyc_A 77 GKLHER-QQNVPVFLLGDREK 96 (755)
T ss_dssp HHHHHH-STTCCEEEEECHHH
T ss_pred HHHHHh-CCCCCEEEEecCCc
Confidence 455543 23689888776543
No 225
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=22.47 E-value=92 Score=22.18 Aligned_cols=76 Identities=12% Similarity=0.061 Sum_probs=42.9
Q ss_pred EEEEEecCCChHH-----HHHHHHHCCCeEEEECC---CCCC------CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHH
Q 028010 2 VVGVLALQGSFNE-----HIAALKRLGVKGVEIRK---PDQL------QNVSSLIIPGGESTTMARLAEYHNLFPALREF 67 (215)
Q Consensus 2 ~v~il~~~G~~~s-----~~~~l~~~G~~v~~~~~---~~~l------~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~ 67 (215)
||.+-...|+.++ +...|+..|+++..... ++++ .++|.+.++......+..+ ..+.+.|++.
T Consensus 5 ~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~---~~~i~~l~~~ 81 (137)
T 1ccw_A 5 TIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDC---KGLRQKCDEA 81 (137)
T ss_dssp EEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSSTHHHHH---TTHHHHHHHT
T ss_pred EEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCcCcHHHH---HHHHHHHHhc
Confidence 4555555554332 35689999999986532 2222 3689999988655444444 3456666653
Q ss_pred HHcCCcEEEEehHHH
Q 028010 68 VKMGKPVWGTCAGLI 82 (215)
Q Consensus 68 ~~~~~PilGIC~G~Q 82 (215)
-..+.++ ++.|..
T Consensus 82 g~~~i~v--~vGG~~ 94 (137)
T 1ccw_A 82 GLEGILL--YVGGNI 94 (137)
T ss_dssp TCTTCEE--EEEESC
T ss_pred CCCCCEE--EEECCC
Confidence 1112333 555643
No 226
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=22.39 E-value=1.6e+02 Score=23.92 Aligned_cols=26 Identities=15% Similarity=0.218 Sum_probs=17.2
Q ss_pred EEEEEecCCChH-HHHHHHHHC-CCeEEE
Q 028010 2 VVGVLALQGSFN-EHIAALKRL-GVKGVE 28 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~-G~~v~~ 28 (215)
||+|+-. |... .+.+.|.+. +++++-
T Consensus 6 rvgiiG~-G~~g~~~~~~l~~~~~~~l~a 33 (344)
T 3euw_A 6 RIALFGA-GRIGHVHAANIAANPDLELVV 33 (344)
T ss_dssp EEEEECC-SHHHHHHHHHHHHCTTEEEEE
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCcEEEE
Confidence 8888887 5443 466777765 666653
No 227
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=22.20 E-value=2.8e+02 Score=22.40 Aligned_cols=27 Identities=11% Similarity=0.234 Sum_probs=17.4
Q ss_pred EEEEEecCCChHH--HHHHHHHC-CCeEEEE
Q 028010 2 VVGVLALQGSFNE--HIAALKRL-GVKGVEI 29 (215)
Q Consensus 2 ~v~il~~~G~~~s--~~~~l~~~-G~~v~~~ 29 (215)
||||+-. |.... +..+++.. +++++-+
T Consensus 25 rigiIG~-G~ig~~~~~~~~~~~~~~~lvav 54 (350)
T 4had_A 25 RFGIIST-AKIGRDNVVPAIQDAENCVVTAI 54 (350)
T ss_dssp EEEEESC-CHHHHHTHHHHHHHCSSEEEEEE
T ss_pred EEEEEcC-hHHHHHHHHHHHHhCCCeEEEEE
Confidence 8999987 44432 46677765 5676544
No 228
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=22.19 E-value=2.8e+02 Score=21.59 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=32.7
Q ss_pred HHHHHHHHCCCeEEEECCCCC------------CCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 14 EHIAALKRLGVKGVEIRKPDQ------------LQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 14 s~~~~l~~~G~~v~~~~~~~~------------l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
.+.+++++.|+++.+.....+ -.++|+||+.+..... . +.++...+ ++|+.-+
T Consensus 36 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-~---------~~~~~l~~-~iPvV~i 100 (303)
T 3kke_A 36 GVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFD-D---------DMLAAVLE-GVPAVTI 100 (303)
T ss_dssp HHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCC-H---------HHHHHHHT-TSCEEEE
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCc-H---------HHHHHHhC-CCCEEEE
Confidence 356778889999887654321 1469999998753321 1 12334445 8887765
No 229
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=22.19 E-value=2.7e+02 Score=21.35 Aligned_cols=53 Identities=6% Similarity=-0.033 Sum_probs=32.6
Q ss_pred HHHHHHHHCCCeEEEECCCCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcEEEE
Q 028010 14 EHIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (215)
Q Consensus 14 s~~~~l~~~G~~v~~~~~~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~PilGI 77 (215)
.+.+++++.|+++.+.....+ + .++|+||+.+..... +.++...+.++|+.-+
T Consensus 34 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~-----------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 34 GISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND-----------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp HHHHHHHHTTCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC-----------HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh-----------HHHHHHHHCCCCEEEE
Confidence 356778889999888654321 1 479999997753211 1233334468887654
No 230
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=22.17 E-value=1.7e+02 Score=24.58 Aligned_cols=45 Identities=9% Similarity=0.009 Sum_probs=32.0
Q ss_pred CEEEEEecCCChH---------------HHHHHHHHCCCeEEEECCCC--------CCCCcCEEEEcC
Q 028010 1 MVVGVLALQGSFN---------------EHIAALKRLGVKGVEIRKPD--------QLQNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~G~~~---------------s~~~~l~~~G~~v~~~~~~~--------~l~~~d~lil~G 45 (215)
|||..+-+.|.-. .+.+.|++.|++++...... .+.++|+||...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~lg~~~~~l~~~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~ 70 (351)
T 3jtm_A 3 KKIVGVFYKANEYATKNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTP 70 (351)
T ss_dssp CEEEEECCCCTHHHHHCTTCCSSTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECT
T ss_pred ceEEEEEeccccccccCCCEEEeccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEcc
Confidence 6777777666433 46789999999998876431 256889988743
No 231
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=22.17 E-value=72 Score=21.51 Aligned_cols=72 Identities=13% Similarity=0.109 Sum_probs=39.1
Q ss_pred EEEEEecCCChH-HHHHHHHHCC-CeEEEECCCC----CC--CCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCc
Q 028010 2 VVGVLALQGSFN-EHIAALKRLG-VKGVEIRKPD----QL--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKP 73 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G-~~v~~~~~~~----~l--~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~P 73 (215)
||.|++-.-... .+.+.|+..| +++....+.+ .+ ..+|.+++-=..+. ++. ..+.+.|++.. ...|
T Consensus 16 ~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~-~~g----~~~~~~l~~~~-~~~~ 89 (135)
T 3snk_A 16 QVALFSSDPNFKRDVATRLDALAIYDVRVSETDDFLKGPPADTRPGIVILDLGGGD-LLG----KPGIVEARALW-ATVP 89 (135)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCTTCCCSEEEEEEETTG-GGG----STTHHHHHGGG-TTCC
T ss_pred EEEEEcCCHHHHHHHHHHHhhcCCeEEEEeccHHHHHHHHhccCCCEEEEeCCCCC-chH----HHHHHHHHhhC-CCCc
Confidence 555555443333 4667899999 9888776542 22 35788877321111 011 12234454432 2688
Q ss_pred EEEEeh
Q 028010 74 VWGTCA 79 (215)
Q Consensus 74 ilGIC~ 79 (215)
++-+..
T Consensus 90 ii~~s~ 95 (135)
T 3snk_A 90 LIAVSD 95 (135)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 887764
No 232
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=22.17 E-value=34 Score=25.82 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=19.0
Q ss_pred CEEEEEecC----CChHH----HHHH-HHHCCCeEEEEC
Q 028010 1 MVVGVLALQ----GSFNE----HIAA-LKRLGVKGVEIR 30 (215)
Q Consensus 1 m~v~il~~~----G~~~s----~~~~-l~~~G~~v~~~~ 30 (215)
|||.|+... |+-.. +.+. +++.|.++++++
T Consensus 3 mkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~d 41 (197)
T 2vzf_A 3 YSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIH 41 (197)
T ss_dssp EEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEE
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 388888765 43222 3455 666798888775
No 233
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=22.02 E-value=1.4e+02 Score=25.36 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=23.8
Q ss_pred CcCEEEEcC-CCcchHHHHHhhCCHHHHHHHHHHcCCcEEE
Q 028010 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWG 76 (215)
Q Consensus 37 ~~d~lil~G-G~~~~~~~l~~~~~l~~~i~~~~~~~~PilG 76 (215)
.+++||+-| |.+..-. +..+.+.|+++.++|+||.-
T Consensus 253 g~~GiVle~~G~Gn~p~----~~~~~~~l~~a~~~Gi~VV~ 289 (358)
T 2him_A 253 PVKALILRSYGVGNAPQ----NKAFLQELQEASDRGIVVVN 289 (358)
T ss_dssp SCSEEEEEEBTTTBCCC----CHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEecCCCCCCCC----cHHHHHHHHHHHHCCCEEEE
Confidence 589999977 5433211 01246778888889999864
No 234
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=21.99 E-value=2.4e+02 Score=20.95 Aligned_cols=32 Identities=22% Similarity=0.273 Sum_probs=21.2
Q ss_pred HHHHHCCCeEEEECCCC----------CCCCcCEEEE-cCCCc
Q 028010 17 AALKRLGVKGVEIRKPD----------QLQNVSSLII-PGGES 48 (215)
Q Consensus 17 ~~l~~~G~~v~~~~~~~----------~l~~~d~lil-~GG~~ 48 (215)
+..+++|+++....... ...++|++|| ||++.
T Consensus 37 ~~a~~~g~~l~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~T 79 (154)
T 1uqr_A 37 QSAQAQGYELDYFQANGEESLINRIHQAFQNTDFIIINPGAFT 79 (154)
T ss_dssp HHHHHTTCEEEEEECSSHHHHHHHHHHTTTTCCEEEEECTTHH
T ss_pred HHHHHCCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEECcchhc
Confidence 34456789888765431 2356899888 88764
No 235
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=21.87 E-value=59 Score=22.06 Aligned_cols=43 Identities=9% Similarity=0.028 Sum_probs=27.1
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCC------CCcCEEEEc
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQL------QNVSSLIIP 44 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l------~~~d~lil~ 44 (215)
||.|++-+-... .+.+.|+..|+++..+.+.++. ..+|.+++-
T Consensus 9 ~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d 58 (142)
T 3cg4_A 9 DVMIVDDDAHVRIAVKTILSDAGFHIISADSGGQCIDLLKKGFSGVVLLD 58 (142)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTCCCEEEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCeEEEEeCCHHHHHHHHHhcCCCEEEEe
Confidence 566655443333 4667888999998877654321 347888774
No 236
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=21.73 E-value=53 Score=21.09 Aligned_cols=45 Identities=9% Similarity=-0.031 Sum_probs=28.9
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCC------CCcCEEEEcC
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQL------QNVSSLIIPG 45 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l------~~~d~lil~G 45 (215)
|||.|+.-+-... .+.+.|+..|+++....+.++. ..+|.+++--
T Consensus 2 ~~iliv~~~~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~~~dlii~d~ 53 (119)
T 2j48_A 2 GHILLLEEEDEAATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAW 53 (119)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhCCcEEEEecCHHHHHHHHHhcCCCEEEEec
Confidence 4666665544333 4667889999998877654321 2578888754
No 237
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=21.62 E-value=1.2e+02 Score=23.72 Aligned_cols=17 Identities=12% Similarity=0.102 Sum_probs=12.8
Q ss_pred HHHHHHHCCCeEEEECC
Q 028010 15 HIAALKRLGVKGVEIRK 31 (215)
Q Consensus 15 ~~~~l~~~G~~v~~~~~ 31 (215)
-++.|.+.|++++++.+
T Consensus 46 ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 46 RIKGFLQEGAAITVVAP 62 (223)
T ss_dssp HHHHHGGGCCCEEEECS
T ss_pred HHHHHHHCCCEEEEECC
Confidence 45678888999888753
No 238
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=21.58 E-value=70 Score=20.89 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=28.1
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCCCC------CCcCEEEE
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQL------QNVSSLII 43 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~l------~~~d~lil 43 (215)
|||.|++-+-... .+...|+..|+++....+.++. ..+|.+++
T Consensus 1 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~dlil~ 50 (121)
T 2pl1_A 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIV 50 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEE
T ss_pred CeEEEEeCcHHHHHHHHHHHhhcCCEEEEeCCHHHHHHHHhccCCCEEEE
Confidence 6777776544333 4567888899998777654221 35788877
No 239
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=21.47 E-value=50 Score=22.85 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=25.4
Q ss_pred CEEEEEecCCChH-HHHHHHHHCCCeEEEECCCCC----C--CCcCEEEE
Q 028010 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQ----L--QNVSSLII 43 (215)
Q Consensus 1 m~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~----l--~~~d~lil 43 (215)
|||.|++-.-... .+.+.|++.|+++..+.+.++ + ..+|.+++
T Consensus 15 ~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~ 64 (143)
T 3m6m_D 15 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIV 64 (143)
T ss_dssp CEEEEECSSHHHHHHHHHHHHC--CEEEEESSHHHHHHHHHHSCCSEEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEE
Confidence 4566665433333 356678888998887765432 1 35898887
No 240
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=21.45 E-value=65 Score=26.60 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHcCCcEEEEehHHHHHHHhhcc
Q 028010 59 NLFPALREFVKMGKPVWGTCAGLIFLANKAVG 90 (215)
Q Consensus 59 ~l~~~i~~~~~~~~PilGIC~G~QlLa~~~~~ 90 (215)
.+.+.|++.+++++|++|.+.|.-|-|+....
T Consensus 15 ~il~~l~~~i~~~~~iig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 15 ELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceEEEecccchhhHHHHh
Confidence 35677888899999999999999999988653
No 241
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=21.24 E-value=2.7e+02 Score=22.68 Aligned_cols=29 Identities=14% Similarity=0.266 Sum_probs=18.7
Q ss_pred CEEEEEecCCChHHHHHHHHHC--CCeEEEE
Q 028010 1 MVVGVLALQGSFNEHIAALKRL--GVKGVEI 29 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~--G~~v~~~ 29 (215)
|||+|+-...--..+.+.|.+. +++++-+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav 44 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDV 44 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEE
Confidence 3889988843333567778776 6776533
No 242
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=21.18 E-value=50 Score=22.53 Aligned_cols=71 Identities=17% Similarity=0.052 Sum_probs=40.7
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCC------CCCcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCcE
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQ------LQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPV 74 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~------l~~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~Pi 74 (215)
||.|++-+-... .+.+.|+..|+++....+.++ -..+|.+++-- .+. ...+ .+.+.|++. ....|+
T Consensus 6 ~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~-~~~-~~g~----~~~~~l~~~-~~~~pi 78 (142)
T 2qxy_A 6 TVMVVDESRITFLAVKNALEKDGFNVIWAKNEQEAFTFLRREKIDLVFVDV-FEG-EESL----NLIRRIREE-FPDTKV 78 (142)
T ss_dssp EEEEECSCHHHHHHHHHHHGGGTCEEEEESSHHHHHHHHTTSCCSEEEEEC-TTT-HHHH----HHHHHHHHH-CTTCEE
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhccCCCEEEEeC-CCC-CcHH----HHHHHHHHH-CCCCCE
Confidence 566665443333 456788889999887765421 13589888854 322 1111 123445443 236888
Q ss_pred EEEeh
Q 028010 75 WGTCA 79 (215)
Q Consensus 75 lGIC~ 79 (215)
+.++.
T Consensus 79 i~ls~ 83 (142)
T 2qxy_A 79 AVLSA 83 (142)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 88764
No 243
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=21.10 E-value=70 Score=21.28 Aligned_cols=73 Identities=7% Similarity=0.011 Sum_probs=39.6
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCC------CC-CcCEEEEcCCCcchHHHHHhhCCHHHHHHHHHHcCCc
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQ------LQ-NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKP 73 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~------l~-~~d~lil~GG~~~~~~~l~~~~~l~~~i~~~~~~~~P 73 (215)
||.|++-+-... .+.+.|+..|+++..+.+.++ -. .+|.+++-=..+...+.+ .+.+.|++. ....|
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~----~~~~~l~~~-~~~~~ 81 (132)
T 2rdm_A 7 TILLADDEAILLLDFESTLTDAGFLVTAVSSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGW----QVARVAREI-DPNMP 81 (132)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCCEEEEESCCSSSSCHH----HHHHHHHHH-CTTCC
T ss_pred eEEEEcCcHHHHHHHHHHHHHcCCEEEEECCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHH----HHHHHHHhc-CCCCC
Confidence 666666544333 456788889999887765421 12 689888733221100111 123444443 24688
Q ss_pred EEEEeh
Q 028010 74 VWGTCA 79 (215)
Q Consensus 74 ilGIC~ 79 (215)
++-+..
T Consensus 82 ii~~s~ 87 (132)
T 2rdm_A 82 IVYISG 87 (132)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 887754
No 244
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.03 E-value=64 Score=22.39 Aligned_cols=71 Identities=11% Similarity=-0.026 Sum_probs=40.3
Q ss_pred EEEEEecCCChH-HHHHHHHHCCCeEEEECCCCC------CCCcCEEEEcCCCc--chHHHHHhhCCHHHHHHHHHHcCC
Q 028010 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPDQ------LQNVSSLIIPGGES--TTMARLAEYHNLFPALREFVKMGK 72 (215)
Q Consensus 2 ~v~il~~~G~~~-s~~~~l~~~G~~v~~~~~~~~------l~~~d~lil~GG~~--~~~~~l~~~~~l~~~i~~~~~~~~ 72 (215)
||.|++-+-... .+.+.|+..|+++..+.+.++ -..+|.+++--..+ +..+ +.+.|++. ....
T Consensus 9 ~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~-------~~~~l~~~-~~~~ 80 (154)
T 2rjn_A 9 TVMLVDDEQPILNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRMPEMGGEV-------FLEQVAKS-YPDI 80 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSCSSSCHHH-------HHHHHHHH-CTTS
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHH-------HHHHHHHh-CCCC
Confidence 566665544333 456788889999887765421 13589888743222 1211 23344442 2468
Q ss_pred cEEEEehH
Q 028010 73 PVWGTCAG 80 (215)
Q Consensus 73 PilGIC~G 80 (215)
|++.++.-
T Consensus 81 ~ii~ls~~ 88 (154)
T 2rjn_A 81 ERVVISGY 88 (154)
T ss_dssp EEEEEECG
T ss_pred cEEEEecC
Confidence 88877644
No 245
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=20.99 E-value=3e+02 Score=21.49 Aligned_cols=67 Identities=24% Similarity=0.376 Sum_probs=38.4
Q ss_pred EEEEEecC-CChH-----HHHHHHHHCCCeEEEECC-CCC----------C--CCcCEEEEcCCCcchHHHHHhhCCHHH
Q 028010 2 VVGVLALQ-GSFN-----EHIAALKRLGVKGVEIRK-PDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (215)
Q Consensus 2 ~v~il~~~-G~~~-----s~~~~l~~~G~~v~~~~~-~~~----------l--~~~d~lil~GG~~~~~~~l~~~~~l~~ 62 (215)
+|+++.-. +++. .+.+++++.|+++.+... ..+ + .++|+||+.+...... .+
T Consensus 3 ~Ig~i~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~---------~~ 73 (313)
T 2h3h_A 3 TIGVIGKSVHPYWSQVEQGVKAAGKALGVDTKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSDPTAV---------IP 73 (313)
T ss_dssp EEEEECSCSSHHHHHHHHHHHHHHHHHTCEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSSTTTT---------HH
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHH---------HH
Confidence 77877532 2233 245667788999887642 211 1 4689999976432211 12
Q ss_pred HHHHHHHcCCcEEEE
Q 028010 63 ALREFVKMGKPVWGT 77 (215)
Q Consensus 63 ~i~~~~~~~~PilGI 77 (215)
.++.+.+.++|+..+
T Consensus 74 ~~~~~~~~~iPvV~~ 88 (313)
T 2h3h_A 74 TIKKALEMGIPVVTL 88 (313)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCeEEEe
Confidence 334444578888765
No 246
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=20.82 E-value=2e+02 Score=20.89 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=34.2
Q ss_pred HHHHHHHCCCeEEEECCCC--CCCCcCEEEEcC--CCcchHHHHHhhCCHHHHHHHHHHcCCcEEEEeh
Q 028010 15 HIAALKRLGVKGVEIRKPD--QLQNVSSLIIPG--GESTTMARLAEYHNLFPALREFVKMGKPVWGTCA 79 (215)
Q Consensus 15 ~~~~l~~~G~~v~~~~~~~--~l~~~d~lil~G--G~~~~~~~l~~~~~l~~~i~~~~~~~~PilGIC~ 79 (215)
....|.+.|..+..+.+.. .+..-|.+|+-. |... . ..+.++.+.++|.++++|+-
T Consensus 55 ~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~---~------~~~~~~~ak~~g~~vi~IT~ 114 (186)
T 1m3s_A 55 FAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETK---S------LIHTAAKAKSLHGIVAALTI 114 (186)
T ss_dssp HHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCH---H------HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcH---H------HHHHHHHHHHCCCEEEEEEC
Confidence 3456778898877765432 234557666543 3321 1 13455666668999999986
No 247
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=20.62 E-value=2.2e+02 Score=23.70 Aligned_cols=17 Identities=12% Similarity=0.151 Sum_probs=13.0
Q ss_pred CCCCCCCcCEEEEcCCC
Q 028010 31 KPDQLQNVSSLIIPGGE 47 (215)
Q Consensus 31 ~~~~l~~~d~lil~GG~ 47 (215)
+.+++.++|.+|++.|.
T Consensus 83 d~~~~~daDiVIitaG~ 99 (330)
T 3ldh_A 83 DYSVSAGSKLVVITAGA 99 (330)
T ss_dssp SSCSCSSCSEEEECCSC
T ss_pred CHHHhCCCCEEEEeCCC
Confidence 34567889999998874
No 248
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=20.48 E-value=2.3e+02 Score=20.47 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=39.5
Q ss_pred EEEEEecCCChH---HHHHHHHHCCCeEEEECCC-------CCCCCcCEEEEcC--CCcchHHHHHhhCCHHHHHHHHHH
Q 028010 2 VVGVLALQGSFN---EHIAALKRLGVKGVEIRKP-------DQLQNVSSLIIPG--GESTTMARLAEYHNLFPALREFVK 69 (215)
Q Consensus 2 ~v~il~~~G~~~---s~~~~l~~~G~~v~~~~~~-------~~l~~~d~lil~G--G~~~~~~~l~~~~~l~~~i~~~~~ 69 (215)
||-++...++.. .....|.+.|..+..+.+. ..+..-|.+|+-. |... . ..+.++.+.+
T Consensus 51 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~---~------~~~~~~~ak~ 121 (183)
T 2xhz_A 51 KVVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESS---E------ITALIPVLKR 121 (183)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCCH---H------HHHHHHHHHT
T ss_pred eEEEEeecHHHHHHHHHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCCH---H------HHHHHHHHHH
Confidence 345555444333 2345677789888776543 2344557666543 3221 1 1345556666
Q ss_pred cCCcEEEEeh
Q 028010 70 MGKPVWGTCA 79 (215)
Q Consensus 70 ~~~PilGIC~ 79 (215)
.|.++++|+.
T Consensus 122 ~g~~vi~IT~ 131 (183)
T 2xhz_A 122 LHVPLICITG 131 (183)
T ss_dssp TTCCEEEEES
T ss_pred CCCCEEEEEC
Confidence 8999999985
No 249
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=20.43 E-value=1.1e+02 Score=25.08 Aligned_cols=32 Identities=16% Similarity=-0.023 Sum_probs=24.2
Q ss_pred CEEEEEecCCC-----hHHHHHHHHHCCCeEEEECCC
Q 028010 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRKP 32 (215)
Q Consensus 1 m~v~il~~~G~-----~~s~~~~l~~~G~~v~~~~~~ 32 (215)
|||+++...+. ...+.++|++.|.+|.++...
T Consensus 21 MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 21 MRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred eEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccH
Confidence 89998885441 225789999999999988653
No 250
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=20.18 E-value=1.1e+02 Score=20.87 Aligned_cols=27 Identities=19% Similarity=0.337 Sum_probs=18.5
Q ss_pred CEEEEEecCCChHHHHHHHHHCCCe-EEEECC
Q 028010 1 MVVGVLALQGSFNEHIAALKRLGVK-GVEIRK 31 (215)
Q Consensus 1 m~v~il~~~G~~~s~~~~l~~~G~~-v~~~~~ 31 (215)
|||+|+.- .+....|+-+|++ +..+.+
T Consensus 1 MkiaVIGD----~dtv~GFrLaGi~~v~~v~~ 28 (101)
T 2ov6_A 1 MELAVIGK----SEFVTGFRLAGISKVYETPD 28 (101)
T ss_dssp CCEEEEEC----HHHHHHHHHHTCCEEEECCS
T ss_pred CEEEEEEC----HHHHHHHHHcCCCceEecCC
Confidence 78888743 4567788889988 543433
No 251
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=20.06 E-value=1.1e+02 Score=25.14 Aligned_cols=27 Identities=15% Similarity=0.358 Sum_probs=17.9
Q ss_pred EEEEEecCCChH--HHHHHHHHC-CCeEEEE
Q 028010 2 VVGVLALQGSFN--EHIAALKRL-GVKGVEI 29 (215)
Q Consensus 2 ~v~il~~~G~~~--s~~~~l~~~-G~~v~~~ 29 (215)
||+|+-. |... .+.++|+.. +++++-+
T Consensus 27 rvgiiG~-G~ig~~~~~~~l~~~~~~~lvav 56 (330)
T 4ew6_A 27 NLAIVGV-GKIVRDQHLPSIAKNANFKLVAT 56 (330)
T ss_dssp EEEEECC-SHHHHHTHHHHHHHCTTEEEEEE
T ss_pred eEEEEec-CHHHHHHHHHHHHhCCCeEEEEE
Confidence 8888887 5444 367777775 6666544
Done!