Query 028030
Match_columns 215
No_of_seqs 191 out of 1824
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 07:54:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028030.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028030hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 1.1E-34 3.7E-39 219.2 11.5 148 67-214 3-155 (157)
2 3drn_A Peroxiredoxin, bacterio 100.0 3.3E-32 1.1E-36 205.9 18.4 144 68-214 2-146 (161)
3 4gqc_A Thiol peroxidase, perox 100.0 2.1E-34 7.1E-39 219.3 5.9 148 67-214 4-157 (164)
4 3gkn_A Bacterioferritin comigr 100.0 1E-31 3.5E-36 203.2 15.4 146 66-214 5-159 (163)
5 3ixr_A Bacterioferritin comigr 100.0 4.8E-32 1.6E-36 208.8 12.3 146 66-214 19-175 (179)
6 3sbc_A Peroxiredoxin TSA1; alp 100.0 1.5E-31 5.2E-36 210.6 13.9 148 66-214 21-178 (216)
7 1psq_A Probable thiol peroxida 100.0 7.3E-31 2.5E-35 199.0 16.4 146 66-214 14-162 (163)
8 3p7x_A Probable thiol peroxida 100.0 1.1E-30 3.9E-35 198.5 16.5 145 66-214 18-165 (166)
9 1xvw_A Hypothetical protein RV 100.0 5E-31 1.7E-35 198.6 14.3 146 68-214 9-157 (160)
10 2c0d_A Thioredoxin peroxidase 100.0 6.4E-31 2.2E-35 209.2 15.3 146 65-213 22-180 (221)
11 3mng_A Peroxiredoxin-5, mitoch 100.0 8.4E-31 2.9E-35 201.0 14.8 145 66-211 13-172 (173)
12 3tue_A Tryparedoxin peroxidase 100.0 4.7E-31 1.6E-35 208.2 12.8 148 66-214 24-182 (219)
13 1n8j_A AHPC, alkyl hydroperoxi 100.0 1.1E-30 3.9E-35 202.3 14.7 144 69-213 2-152 (186)
14 1q98_A Thiol peroxidase, TPX; 100.0 8.5E-31 2.9E-35 199.1 13.1 145 66-213 15-165 (165)
15 2pn8_A Peroxiredoxin-4; thiore 100.0 8.4E-31 2.9E-35 207.1 12.9 146 66-213 17-173 (211)
16 1tp9_A Peroxiredoxin, PRX D (t 100.0 3.3E-30 1.1E-34 195.4 15.1 144 67-212 3-162 (162)
17 2i81_A 2-Cys peroxiredoxin; st 100.0 2.7E-30 9.2E-35 204.5 14.7 145 66-213 19-176 (213)
18 3zrd_A Thiol peroxidase; oxido 100.0 2.1E-30 7E-35 203.2 13.9 145 66-213 50-200 (200)
19 2yzh_A Probable thiol peroxida 100.0 7.9E-30 2.7E-34 194.6 15.7 145 66-214 19-169 (171)
20 1uul_A Tryparedoxin peroxidase 100.0 4.9E-30 1.7E-34 201.0 14.5 146 66-213 4-161 (202)
21 1we0_A Alkyl hydroperoxide red 100.0 7.4E-30 2.5E-34 197.5 15.2 144 68-213 1-153 (187)
22 3tjj_A Peroxiredoxin-4; thiore 100.0 2.7E-30 9.4E-35 209.5 13.3 149 65-214 59-217 (254)
23 3qpm_A Peroxiredoxin; oxidored 100.0 5.7E-30 1.9E-34 206.1 14.8 148 66-214 46-203 (240)
24 3ztl_A Thioredoxin peroxidase; 100.0 4.3E-30 1.5E-34 204.4 13.7 148 65-214 37-195 (222)
25 1qmv_A Human thioredoxin perox 100.0 6.7E-30 2.3E-34 199.5 14.1 146 66-213 3-159 (197)
26 2bmx_A Alkyl hydroperoxidase C 100.0 1.2E-29 4.2E-34 197.6 15.5 144 67-213 3-166 (195)
27 2h01_A 2-Cys peroxiredoxin; th 100.0 7.5E-30 2.6E-34 198.3 13.8 142 69-213 1-155 (192)
28 2wfc_A Peroxiredoxin 5, PRDX5; 100.0 1.4E-29 4.7E-34 193.2 14.9 143 67-212 2-159 (167)
29 1zye_A Thioredoxin-dependent p 100.0 1.7E-29 5.9E-34 200.7 15.6 146 66-213 25-181 (220)
30 3uma_A Hypothetical peroxiredo 100.0 1.3E-29 4.3E-34 196.3 14.4 146 66-212 24-184 (184)
31 2v2g_A Peroxiredoxin 6; oxidor 100.0 1.1E-29 3.8E-34 203.4 13.7 146 68-214 3-162 (233)
32 2a4v_A Peroxiredoxin DOT5; yea 100.0 1.1E-29 3.9E-34 191.4 12.7 144 66-213 5-154 (159)
33 1zof_A Alkyl hydroperoxide-red 100.0 1.5E-29 5.2E-34 197.5 13.6 143 68-213 1-157 (198)
34 1prx_A HORF6; peroxiredoxin, h 100.0 1.1E-28 3.9E-33 196.5 15.7 146 67-213 4-165 (224)
35 3eur_A Uncharacterized protein 100.0 2.2E-28 7.5E-33 180.7 16.0 123 67-197 4-132 (142)
36 3fw2_A Thiol-disulfide oxidore 100.0 1.4E-28 4.7E-33 183.4 14.6 123 66-196 3-134 (150)
37 3ewl_A Uncharacterized conserv 100.0 3.4E-28 1.2E-32 179.3 16.6 117 69-193 2-124 (142)
38 3keb_A Probable thiol peroxida 100.0 2.3E-28 7.8E-33 193.7 16.5 143 66-214 20-173 (224)
39 3gl3_A Putative thiol:disulfid 100.0 8.7E-28 3E-32 178.9 18.8 125 67-200 2-127 (152)
40 1xvq_A Thiol peroxidase; thior 100.0 1.3E-28 4.4E-33 188.8 14.5 144 66-214 16-165 (175)
41 3eyt_A Uncharacterized protein 100.0 6E-29 2.1E-33 186.6 12.2 136 70-213 2-152 (158)
42 3hcz_A Possible thiol-disulfid 100.0 4.8E-29 1.7E-33 184.5 11.3 140 66-213 3-146 (148)
43 2jsy_A Probable thiol peroxida 100.0 7.8E-29 2.7E-33 188.1 12.2 144 66-213 16-163 (167)
44 3lor_A Thiol-disulfide isomera 100.0 9E-29 3.1E-33 185.8 12.1 136 70-213 5-155 (160)
45 4fo5_A Thioredoxin-like protei 100.0 4.5E-29 1.5E-33 184.7 10.1 123 66-197 5-132 (143)
46 2lrn_A Thiol:disulfide interch 100.0 1.8E-28 6.3E-33 183.2 13.5 122 68-197 3-128 (152)
47 3lwa_A Secreted thiol-disulfid 100.0 6.9E-28 2.3E-32 185.5 17.1 142 67-213 30-181 (183)
48 1nm3_A Protein HI0572; hybrid, 100.0 3E-28 1E-32 195.8 15.3 145 67-214 2-164 (241)
49 2v1m_A Glutathione peroxidase; 100.0 6.5E-28 2.2E-32 182.7 16.3 145 67-214 4-168 (169)
50 3u5r_E Uncharacterized protein 100.0 3.4E-28 1.2E-32 192.9 15.1 123 66-196 30-161 (218)
51 1xcc_A 1-Cys peroxiredoxin; un 100.0 1.7E-28 5.8E-33 195.0 13.3 146 68-214 3-163 (220)
52 3kcm_A Thioredoxin family prot 100.0 1.6E-27 5.4E-32 177.9 17.5 137 68-212 2-141 (154)
53 2p5q_A Glutathione peroxidase 100.0 4E-28 1.4E-32 184.0 14.2 145 67-215 5-170 (170)
54 1xzo_A BSSCO, hypothetical pro 100.0 7.5E-28 2.6E-32 183.3 15.4 133 66-199 5-156 (174)
55 2f9s_A Thiol-disulfide oxidore 100.0 7.4E-28 2.5E-32 179.4 15.0 134 69-211 1-135 (151)
56 2gs3_A PHGPX, GPX-4, phospholi 100.0 6.7E-28 2.3E-32 186.3 14.5 138 66-206 21-179 (185)
57 3a2v_A Probable peroxiredoxin; 100.0 9.6E-28 3.3E-32 193.6 15.6 147 67-214 4-159 (249)
58 3hdc_A Thioredoxin family prot 100.0 1.1E-27 3.6E-32 180.2 14.7 138 65-214 12-149 (158)
59 3kh7_A Thiol:disulfide interch 100.0 2.4E-27 8.2E-32 181.9 16.1 137 64-212 26-166 (176)
60 2l5o_A Putative thioredoxin; s 100.0 2.1E-27 7.1E-32 177.1 15.3 137 69-213 3-141 (153)
61 2lrt_A Uncharacterized protein 100.0 1.4E-27 4.9E-32 178.8 14.4 123 67-199 8-134 (152)
62 1jfu_A Thiol:disulfide interch 100.0 1.8E-27 6.3E-32 183.4 15.2 133 64-200 30-165 (186)
63 3kij_A Probable glutathione pe 100.0 3.7E-28 1.3E-32 186.9 11.1 144 69-213 13-170 (180)
64 3or5_A Thiol:disulfide interch 100.0 3.9E-27 1.3E-31 177.6 16.3 138 66-212 6-150 (165)
65 2ywi_A Hypothetical conserved 100.0 2.1E-27 7.3E-32 184.4 15.1 123 66-196 16-148 (196)
66 2vup_A Glutathione peroxidase- 99.9 6.4E-28 2.2E-32 187.2 11.5 143 66-214 20-186 (190)
67 2obi_A PHGPX, GPX-4, phospholi 99.9 9.4E-28 3.2E-32 185.0 12.2 133 66-201 19-172 (183)
68 2cvb_A Probable thiol-disulfid 99.9 3.2E-27 1.1E-31 182.4 14.9 120 66-194 5-132 (188)
69 3fkf_A Thiol-disulfide oxidore 99.9 2.1E-27 7.1E-32 175.7 13.2 123 66-196 3-132 (148)
70 3erw_A Sporulation thiol-disul 99.9 7.6E-27 2.6E-31 171.9 15.6 125 66-199 7-135 (145)
71 2f8a_A Glutathione peroxidase 99.9 4.1E-27 1.4E-31 185.5 14.8 144 69-213 21-207 (208)
72 2b5x_A YKUV protein, TRXY; thi 99.9 4.9E-27 1.7E-31 173.5 14.3 137 68-213 1-145 (148)
73 4f82_A Thioredoxin reductase; 99.9 5.9E-27 2E-31 179.1 15.0 147 66-213 8-175 (176)
74 2p31_A CL683, glutathione pero 99.9 4.7E-28 1.6E-32 186.5 8.9 129 66-200 21-168 (181)
75 2pwj_A Mitochondrial peroxired 99.9 4E-27 1.4E-31 180.1 14.0 141 68-212 7-171 (171)
76 2i3y_A Epididymal secretory gl 99.9 1.1E-26 3.9E-31 183.8 15.1 144 69-214 30-212 (215)
77 4eo3_A Bacterioferritin comigr 99.9 9.4E-27 3.2E-31 194.7 14.8 135 72-214 2-136 (322)
78 2xhf_A Peroxiredoxin 5; oxidor 99.9 1.1E-26 3.6E-31 177.3 13.6 147 66-213 12-170 (171)
79 3dwv_A Glutathione peroxidase- 99.9 4.9E-28 1.7E-32 187.5 6.3 145 66-213 18-183 (187)
80 2ggt_A SCO1 protein homolog, m 99.9 1.4E-26 4.7E-31 174.5 14.1 135 73-213 2-161 (164)
81 3ia1_A THIO-disulfide isomeras 99.9 7.9E-27 2.7E-31 174.2 12.2 122 67-200 4-131 (154)
82 2b7k_A SCO1 protein; metalloch 99.9 3.1E-26 1.1E-30 179.2 16.1 148 66-214 11-180 (200)
83 3cmi_A Peroxiredoxin HYR1; thi 99.9 2E-27 6.9E-32 181.2 9.1 138 71-215 9-170 (171)
84 3raz_A Thioredoxin-related pro 99.9 1.7E-26 5.8E-31 172.3 12.9 132 73-214 4-140 (151)
85 3me7_A Putative uncharacterize 99.9 5.6E-26 1.9E-30 173.4 14.8 141 69-213 2-158 (170)
86 2r37_A Glutathione peroxidase 99.9 3.9E-26 1.3E-30 179.8 14.4 143 69-213 12-193 (207)
87 2lja_A Putative thiol-disulfid 99.9 3.7E-26 1.3E-30 170.1 13.4 138 67-213 2-142 (152)
88 1zzo_A RV1677; thioredoxin fol 99.9 1E-25 3.5E-30 163.9 15.5 120 70-200 1-122 (136)
89 1xiy_A Peroxiredoxin, pfaop; a 99.9 3.2E-26 1.1E-30 176.5 13.3 146 68-214 1-179 (182)
90 2hyx_A Protein DIPZ; thioredox 99.9 5.2E-26 1.8E-30 192.0 15.9 130 66-203 49-189 (352)
91 2rli_A SCO2 protein homolog, m 99.9 9E-26 3.1E-30 171.3 15.5 137 75-212 7-163 (171)
92 3ha9_A Uncharacterized thiored 99.9 1E-26 3.5E-31 175.8 9.7 134 66-212 9-162 (165)
93 1lu4_A Soluble secreted antige 99.9 1.3E-25 4.4E-30 163.7 14.4 114 72-196 2-116 (136)
94 2ls5_A Uncharacterized protein 99.9 6.1E-28 2.1E-32 181.5 0.0 140 66-213 5-147 (159)
95 4evm_A Thioredoxin family prot 99.9 4.5E-25 1.5E-29 160.3 15.3 118 73-199 1-125 (138)
96 2b1k_A Thiol:disulfide interch 99.9 3.9E-25 1.3E-29 167.6 14.4 126 65-202 19-149 (168)
97 4hde_A SCO1/SENC family lipopr 99.9 1.1E-24 3.6E-29 166.4 16.9 130 69-199 7-154 (170)
98 2k6v_A Putative cytochrome C o 99.9 2.6E-26 8.7E-31 174.3 6.9 138 69-213 11-169 (172)
99 1kng_A Thiol:disulfide interch 99.9 4E-25 1.4E-29 165.0 11.7 126 66-202 6-141 (156)
100 2h30_A Thioredoxin, peptide me 99.9 4.6E-25 1.6E-29 166.1 6.6 120 70-199 16-142 (164)
101 1i5g_A Tryparedoxin II; electr 99.9 1.8E-24 6.3E-29 159.8 9.6 120 70-197 3-128 (144)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.9 1.2E-23 4E-28 155.9 9.1 120 69-197 3-128 (146)
103 3s9f_A Tryparedoxin; thioredox 99.9 5.6E-24 1.9E-28 161.5 3.9 122 67-197 21-148 (165)
104 1o73_A Tryparedoxin; electron 99.9 4E-23 1.4E-27 152.3 8.0 120 69-197 3-128 (144)
105 2lus_A Thioredoxion; CR-Trp16, 99.8 2.6E-24 9E-29 158.3 0.0 118 72-197 2-127 (143)
106 2l57_A Uncharacterized protein 99.7 3.5E-17 1.2E-21 117.9 8.1 100 72-199 4-103 (126)
107 2ju5_A Thioredoxin disulfide i 99.7 2.4E-17 8.2E-22 123.4 4.5 109 69-199 25-136 (154)
108 2fwh_A Thiol:disulfide interch 99.7 1.7E-17 5.9E-22 121.2 2.1 117 68-212 4-126 (134)
109 3hxs_A Thioredoxin, TRXP; elec 99.6 8.8E-16 3E-20 112.5 10.0 91 79-200 36-126 (141)
110 3ul3_B Thioredoxin, thioredoxi 99.6 3.6E-15 1.2E-19 107.8 11.9 108 70-214 20-127 (128)
111 3fk8_A Disulphide isomerase; A 99.6 1.2E-14 4E-19 105.5 10.9 79 92-197 27-110 (133)
112 4h86_A Peroxiredoxin type-2; o 99.5 2.3E-13 7.9E-18 104.7 14.7 145 67-212 25-199 (199)
113 3p2a_A Thioredoxin 2, putative 99.5 3.1E-14 1.1E-18 105.3 9.6 103 69-202 30-132 (148)
114 2kuc_A Putative disulphide-iso 99.5 2.8E-14 9.4E-19 103.0 8.3 86 87-200 20-108 (130)
115 3zzx_A Thioredoxin; oxidoreduc 99.5 7E-14 2.4E-18 98.0 9.7 86 92-214 18-103 (105)
116 2pu9_C TRX-F, thioredoxin F-ty 99.5 2.4E-13 8.2E-18 95.4 11.7 89 90-211 20-108 (111)
117 3f9u_A Putative exported cytoc 99.5 4.8E-14 1.7E-18 106.8 7.5 105 87-200 40-152 (172)
118 3qfa_C Thioredoxin; protein-pr 99.5 3.1E-13 1E-17 96.0 10.1 75 92-198 29-103 (116)
119 2voc_A Thioredoxin; electron t 99.5 2.1E-13 7.1E-18 96.1 8.7 76 93-199 16-91 (112)
120 2l5l_A Thioredoxin; structural 99.5 4.1E-13 1.4E-17 97.9 10.5 76 93-199 37-112 (136)
121 3f3q_A Thioredoxin-1; His TAG, 99.5 7.7E-13 2.6E-17 92.8 11.3 74 93-198 23-96 (109)
122 3cxg_A Putative thioredoxin; m 99.5 4.4E-14 1.5E-18 103.0 5.0 90 77-198 23-115 (133)
123 1faa_A Thioredoxin F; electron 99.5 7.2E-13 2.5E-17 94.7 11.1 87 92-211 35-121 (124)
124 1t00_A Thioredoxin, TRX; redox 99.4 5.8E-13 2E-17 93.3 10.0 77 93-200 22-98 (112)
125 3gix_A Thioredoxin-like protei 99.4 2.1E-13 7.1E-18 101.4 8.1 74 93-197 22-104 (149)
126 2vlu_A Thioredoxin, thioredoxi 99.4 2E-13 6.9E-18 97.3 7.2 108 69-210 7-116 (122)
127 1z6n_A Hypothetical protein PA 99.4 1.4E-13 4.9E-18 104.3 6.4 79 88-197 48-129 (167)
128 1x5d_A Protein disulfide-isome 99.4 7.3E-13 2.5E-17 95.6 9.9 80 93-202 24-106 (133)
129 1dby_A Chloroplast thioredoxin 99.4 1.2E-12 4E-17 91.0 10.6 76 93-199 18-93 (107)
130 1w4v_A Thioredoxin, mitochondr 99.4 1.1E-12 3.7E-17 93.4 10.4 76 93-199 30-105 (119)
131 3tco_A Thioredoxin (TRXA-1); d 99.4 9.7E-13 3.3E-17 91.4 9.9 77 93-200 20-96 (109)
132 2trx_A Thioredoxin; electron t 99.4 1.1E-12 3.7E-17 91.3 10.1 76 93-199 19-94 (108)
133 3die_A Thioredoxin, TRX; elect 99.4 2.3E-12 7.9E-17 89.1 11.6 86 93-213 18-103 (106)
134 1nsw_A Thioredoxin, TRX; therm 99.4 5.1E-13 1.7E-17 92.5 8.2 76 93-199 16-91 (105)
135 1xfl_A Thioredoxin H1; AT3G510 99.4 7.6E-13 2.6E-17 95.1 9.3 94 72-197 14-109 (124)
136 2av4_A Thioredoxin-like protei 99.4 6.4E-13 2.2E-17 98.8 9.0 68 94-192 41-108 (160)
137 2ppt_A Thioredoxin-2; thiredox 99.4 1.4E-12 4.9E-17 97.4 11.0 77 93-200 63-139 (155)
138 2o8v_B Thioredoxin 1; disulfid 99.4 6.2E-13 2.1E-17 96.1 8.7 76 93-199 39-114 (128)
139 3d6i_A Monothiol glutaredoxin- 99.4 1.1E-12 3.8E-17 91.9 9.8 76 93-198 20-95 (112)
140 1ep7_A Thioredoxin CH1, H-type 99.4 1.4E-12 4.6E-17 91.4 10.1 74 94-198 24-97 (112)
141 1thx_A Thioredoxin, thioredoxi 99.4 1.7E-12 5.7E-17 91.1 10.4 77 93-200 24-100 (115)
142 2dml_A Protein disulfide-isome 99.4 4.8E-13 1.7E-17 96.3 7.7 91 93-213 34-124 (130)
143 3gnj_A Thioredoxin domain prot 99.4 2.4E-12 8.2E-17 89.8 10.7 77 93-200 21-97 (111)
144 2i4a_A Thioredoxin; acidophIle 99.4 4.4E-12 1.5E-16 87.8 11.6 76 93-199 19-94 (107)
145 4euy_A Uncharacterized protein 99.4 7.6E-13 2.6E-17 92.0 7.6 75 93-199 17-91 (105)
146 3d22_A TRXH4, thioredoxin H-ty 99.4 1.9E-12 6.5E-17 94.4 10.1 80 87-198 39-118 (139)
147 2wz9_A Glutaredoxin-3; protein 99.4 2.5E-12 8.6E-17 95.7 10.7 74 93-198 31-104 (153)
148 3hz4_A Thioredoxin; NYSGXRC, P 99.4 7.2E-13 2.5E-17 97.1 7.6 78 93-201 23-100 (140)
149 2dj3_A Protein disulfide-isome 99.4 7.6E-13 2.6E-17 95.7 7.6 91 78-197 8-101 (133)
150 2j23_A Thioredoxin; immune pro 99.4 2E-12 6.8E-17 92.3 9.6 76 93-198 32-107 (121)
151 2oe3_A Thioredoxin-3; electron 99.4 1.7E-12 5.8E-17 91.9 8.9 84 93-213 29-112 (114)
152 1sen_A Thioredoxin-like protei 99.4 5.2E-14 1.8E-18 106.3 1.1 95 76-198 29-123 (164)
153 2e0q_A Thioredoxin; electron t 99.4 3.1E-12 1.1E-16 87.8 10.0 76 93-200 15-90 (104)
154 2yzu_A Thioredoxin; redox prot 99.4 1.9E-12 6.5E-17 89.8 9.0 76 93-199 17-92 (109)
155 2dj1_A Protein disulfide-isome 99.4 1E-12 3.5E-17 95.8 7.9 90 80-200 20-111 (140)
156 1r26_A Thioredoxin; redox-acti 99.4 3.1E-12 1.1E-16 92.1 10.2 73 93-197 36-108 (125)
157 1gh2_A Thioredoxin-like protei 99.4 4.5E-12 1.5E-16 88.2 10.7 74 93-198 20-93 (107)
158 1fb6_A Thioredoxin M; electron 99.4 1.6E-12 5.4E-17 89.8 8.3 76 93-199 17-92 (105)
159 3m9j_A Thioredoxin; oxidoreduc 99.4 4.7E-12 1.6E-16 87.4 10.7 75 92-198 18-92 (105)
160 1x5e_A Thioredoxin domain cont 99.4 1.5E-12 5.1E-17 93.4 8.5 72 96-198 24-95 (126)
161 2lst_A Thioredoxin; structural 99.1 4E-14 1.4E-18 102.2 0.0 92 84-203 9-106 (130)
162 2f51_A Thioredoxin; electron t 99.4 4.1E-12 1.4E-16 90.4 10.1 99 80-211 6-110 (118)
163 3qou_A Protein YBBN; thioredox 99.4 1.1E-12 3.8E-17 107.1 7.9 78 92-200 24-101 (287)
164 1syr_A Thioredoxin; SGPP, stru 99.4 4.1E-12 1.4E-16 89.2 9.9 74 93-198 25-98 (112)
165 1qgv_A Spliceosomal protein U5 99.4 3.1E-12 1E-16 94.3 9.2 73 93-196 22-94 (142)
166 1ti3_A Thioredoxin H, PTTRXH1; 99.4 6.5E-12 2.2E-16 87.9 10.4 84 93-210 25-108 (113)
167 2vm1_A Thioredoxin, thioredoxi 99.4 5.9E-12 2E-16 88.8 10.1 73 93-197 27-99 (118)
168 3apq_A DNAJ homolog subfamily 99.4 5.6E-13 1.9E-17 104.3 5.2 94 76-200 96-189 (210)
169 2xc2_A Thioredoxinn; oxidoredu 99.3 6E-12 2E-16 89.0 9.9 75 90-197 29-103 (117)
170 2vim_A Thioredoxin, TRX; thior 99.3 1E-11 3.4E-16 85.5 10.7 74 92-197 17-90 (104)
171 1v98_A Thioredoxin; oxidoreduc 99.3 7.9E-12 2.7E-16 91.3 10.6 89 81-200 37-125 (140)
172 1xwb_A Thioredoxin; dimerizati 99.3 1E-11 3.5E-16 85.7 10.7 75 92-197 18-92 (106)
173 2l6c_A Thioredoxin; oxidoreduc 99.3 5.6E-12 1.9E-16 88.4 9.3 75 93-199 18-92 (110)
174 2qsi_A Putative hydrogenase ex 99.3 3E-12 1E-16 93.4 7.9 75 95-200 34-110 (137)
175 3h79_A Thioredoxin-like protei 99.3 4.8E-12 1.6E-16 91.0 8.9 88 93-213 32-124 (127)
176 3emx_A Thioredoxin; structural 99.3 2.4E-12 8.2E-17 93.8 7.1 95 93-213 31-125 (135)
177 1zma_A Bacterocin transport ac 99.3 5.6E-12 1.9E-16 89.4 8.8 90 93-213 28-117 (118)
178 3dxb_A Thioredoxin N-terminall 99.3 8.7E-12 3E-16 98.4 10.1 77 93-200 29-105 (222)
179 2djj_A PDI, protein disulfide- 99.3 2.7E-12 9.1E-17 91.2 6.3 88 79-198 9-102 (121)
180 3uvt_A Thioredoxin domain-cont 99.3 9.9E-12 3.4E-16 86.6 9.1 87 93-213 20-108 (111)
181 2dj0_A Thioredoxin-related tra 99.3 7.8E-12 2.7E-16 91.1 8.7 79 93-201 25-109 (137)
182 2i1u_A Thioredoxin, TRX, MPT46 99.3 3.2E-11 1.1E-15 85.4 11.7 86 93-213 29-114 (121)
183 2qgv_A Hydrogenase-1 operon pr 99.3 2.4E-12 8.2E-17 94.3 5.7 78 93-200 33-112 (140)
184 3aps_A DNAJ homolog subfamily 99.3 8.8E-12 3E-16 88.6 7.6 74 93-197 20-93 (122)
185 3ph9_A Anterior gradient prote 99.3 4.4E-12 1.5E-16 94.5 5.0 91 93-213 43-141 (151)
186 1oaz_A Thioredoxin 1; immune s 99.3 1.3E-11 4.3E-16 88.6 7.2 86 93-213 20-119 (123)
187 3idv_A Protein disulfide-isome 99.2 2E-11 6.9E-16 96.7 8.9 89 81-200 19-109 (241)
188 2dbc_A PDCL2, unnamed protein 99.2 3.1E-11 1.1E-15 87.9 8.2 72 93-199 29-100 (135)
189 3ira_A Conserved protein; meth 99.2 2.8E-10 9.5E-15 86.5 12.9 104 87-213 32-143 (173)
190 3t58_A Sulfhydryl oxidase 1; o 99.2 3.1E-11 1.1E-15 106.6 8.7 94 93-213 29-127 (519)
191 1wou_A Thioredoxin -related pr 99.2 5.6E-11 1.9E-15 85.0 8.4 77 92-191 22-105 (123)
192 1nho_A Probable thioredoxin; b 99.2 4.3E-11 1.5E-15 79.3 7.3 79 96-210 3-81 (85)
193 2yj7_A LPBCA thioredoxin; oxid 98.8 1.5E-12 5.2E-17 89.7 0.0 77 93-200 18-94 (106)
194 3q6o_A Sulfhydryl oxidase 1; p 99.2 1.2E-10 4.2E-15 92.9 9.6 69 93-188 29-99 (244)
195 1a8l_A Protein disulfide oxido 99.2 2.2E-10 7.4E-15 90.1 10.7 77 94-200 134-213 (226)
196 1wmj_A Thioredoxin H-type; str 99.1 6.5E-12 2.2E-16 90.2 1.0 84 93-210 35-118 (130)
197 1mek_A Protein disulfide isome 99.1 2.1E-11 7.2E-16 85.9 3.3 87 93-213 23-113 (120)
198 1fo5_A Thioredoxin; disulfide 99.1 7.6E-11 2.6E-15 78.1 5.8 69 95-198 3-71 (85)
199 2es7_A Q8ZP25_salty, putative 99.1 5.9E-11 2E-15 87.4 4.7 75 94-200 34-112 (142)
200 3ed3_A Protein disulfide-isome 99.1 9E-10 3.1E-14 90.8 11.7 69 93-190 34-102 (298)
201 1a0r_P Phosducin, MEKA, PP33; 99.1 3.8E-10 1.3E-14 90.4 8.0 88 93-213 132-222 (245)
202 2hls_A Protein disulfide oxido 99.0 1.7E-09 5.7E-14 86.6 11.1 76 91-200 135-213 (243)
203 3evi_A Phosducin-like protein 99.0 1.3E-09 4.6E-14 77.6 9.3 85 94-213 23-110 (118)
204 3kp8_A Vkorc1/thioredoxin doma 99.0 3.6E-11 1.2E-15 84.2 0.0 77 86-198 4-80 (106)
205 3iv4_A Putative oxidoreductase 99.0 3.4E-09 1.2E-13 74.4 9.9 78 94-199 24-102 (112)
206 1ilo_A Conserved hypothetical 99.0 1.5E-09 5.2E-14 70.5 7.6 62 97-194 2-63 (77)
207 3f8u_A Protein disulfide-isome 99.0 1E-09 3.5E-14 95.8 7.8 87 93-213 369-457 (481)
208 3idv_A Protein disulfide-isome 99.0 2.6E-09 8.7E-14 84.5 9.3 86 93-213 146-233 (241)
209 2trc_P Phosducin, MEKA, PP33; 99.0 9.2E-10 3.1E-14 86.7 6.5 88 93-213 119-209 (217)
210 2dlx_A UBX domain-containing p 99.0 5.7E-09 2E-13 77.7 10.3 91 93-212 41-135 (153)
211 2r2j_A Thioredoxin domain-cont 98.9 3.1E-09 1.1E-13 90.3 9.8 78 93-200 21-104 (382)
212 3gyk_A 27KDA outer membrane pr 98.9 1.7E-09 6E-14 81.7 6.3 110 84-210 12-169 (175)
213 2b5e_A Protein disulfide-isome 98.9 4E-09 1.4E-13 92.6 9.1 77 93-199 30-108 (504)
214 3ga4_A Dolichyl-diphosphooligo 98.9 1.1E-08 3.6E-13 78.0 9.9 69 93-190 36-115 (178)
215 1sji_A Calsequestrin 2, calseq 98.9 6.1E-09 2.1E-13 87.4 9.0 85 93-213 27-118 (350)
216 3uem_A Protein disulfide-isome 98.9 4.9E-09 1.7E-13 88.1 8.2 87 93-214 266-354 (361)
217 3f8u_A Protein disulfide-isome 98.9 6E-09 2E-13 90.9 8.5 77 93-200 20-96 (481)
218 3dml_A Putative uncharacterize 98.8 2.1E-09 7.1E-14 76.2 4.2 81 93-201 17-98 (116)
219 3apo_A DNAJ homolog subfamily 98.8 1E-08 3.5E-13 94.6 10.1 79 89-199 450-528 (780)
220 2ywm_A Glutaredoxin-like prote 98.8 1E-08 3.6E-13 80.6 8.4 72 94-200 136-207 (229)
221 3apo_A DNAJ homolog subfamily 98.8 8.6E-09 2.9E-13 95.1 6.8 74 93-197 674-747 (780)
222 3qcp_A QSOX from trypanosoma b 98.8 1.5E-08 5.2E-13 88.0 7.5 69 93-190 41-116 (470)
223 3hd5_A Thiol:disulfide interch 98.7 2.6E-08 8.8E-13 76.6 7.8 43 93-137 24-66 (195)
224 1eej_A Thiol:disulfide interch 98.7 1.9E-08 6.5E-13 78.9 5.8 106 87-210 79-207 (216)
225 2b5e_A Protein disulfide-isome 98.6 3.6E-08 1.2E-12 86.5 6.9 85 93-213 375-463 (504)
226 3h93_A Thiol:disulfide interch 98.6 2.7E-08 9.1E-13 76.3 4.9 42 93-136 24-65 (192)
227 3us3_A Calsequestrin-1; calciu 98.6 3.2E-07 1.1E-11 77.5 10.4 76 93-199 29-110 (367)
228 1a8l_A Protein disulfide oxido 98.5 6.7E-07 2.3E-11 69.9 10.3 78 92-199 20-99 (226)
229 2djk_A PDI, protein disulfide- 98.5 2.1E-07 7E-12 67.2 6.7 74 93-196 22-96 (133)
230 2znm_A Thiol:disulfide interch 98.5 6.6E-08 2.3E-12 74.1 3.5 87 93-191 21-160 (195)
231 1v58_A Thiol:disulfide interch 98.4 9.7E-07 3.3E-11 70.3 9.3 100 87-198 90-218 (241)
232 2ywm_A Glutaredoxin-like prote 98.4 1.4E-06 4.7E-11 68.3 9.5 80 93-202 20-104 (229)
233 1z6m_A Conserved hypothetical 98.4 5E-06 1.7E-10 62.4 11.2 49 87-136 20-69 (175)
234 2rem_A Disulfide oxidoreductas 98.4 7.4E-07 2.5E-11 68.0 6.6 42 93-136 24-65 (193)
235 1t3b_A Thiol:disulfide interch 98.3 4.7E-07 1.6E-11 70.7 5.2 38 93-135 85-122 (211)
236 1ttz_A Conserved hypothetical 98.3 5.4E-07 1.9E-11 60.4 4.6 58 98-193 3-60 (87)
237 2fgx_A Putative thioredoxin; N 98.3 2.4E-06 8.3E-11 59.5 8.0 63 96-192 30-92 (107)
238 2e7p_A Glutaredoxin; thioredox 98.3 5.1E-07 1.8E-11 63.1 4.5 71 93-197 18-89 (116)
239 1hyu_A AHPF, alkyl hydroperoxi 98.2 8.6E-06 2.9E-10 71.8 11.0 68 93-194 116-183 (521)
240 2qc7_A ERP31, ERP28, endoplasm 98.1 1E-05 3.6E-10 64.3 9.2 88 93-213 21-115 (240)
241 2k8s_A Thioredoxin; dimer, str 98.1 2.1E-06 7E-11 56.2 4.2 65 97-193 3-67 (80)
242 1ego_A Glutaredoxin; electron 98.1 8.3E-06 2.8E-10 53.5 6.8 65 98-192 3-69 (85)
243 1wjk_A C330018D20RIK protein; 98.1 4.8E-06 1.6E-10 57.1 5.6 63 94-192 15-77 (100)
244 3hz8_A Thiol:disulfide interch 98.0 1.1E-05 3.9E-10 61.8 6.9 43 93-137 23-65 (193)
245 2c0g_A ERP29 homolog, windbeut 97.9 8.3E-05 2.9E-09 59.4 10.7 88 93-213 32-128 (248)
246 3l9v_A Putative thiol-disulfid 97.8 5.9E-06 2E-10 63.2 2.1 42 93-136 13-57 (189)
247 3kp9_A Vkorc1/thioredoxin doma 97.8 1.6E-05 5.3E-10 65.0 4.6 86 87-212 190-275 (291)
248 2hls_A Protein disulfide oxido 97.8 9.4E-05 3.2E-09 58.7 8.3 72 94-198 25-102 (243)
249 1h75_A Glutaredoxin-like prote 97.7 8.7E-05 3E-09 48.1 6.4 36 98-141 3-38 (81)
250 3gv1_A Disulfide interchange p 97.7 4.9E-05 1.7E-09 55.8 4.8 99 93-211 13-136 (147)
251 3feu_A Putative lipoprotein; a 97.6 4.4E-05 1.5E-09 58.1 3.8 39 94-136 22-60 (185)
252 1r7h_A NRDH-redoxin; thioredox 97.6 0.00019 6.5E-09 45.5 6.0 35 98-140 3-37 (75)
253 3uem_A Protein disulfide-isome 97.5 0.00032 1.1E-08 58.5 8.2 70 95-190 136-205 (361)
254 4dvc_A Thiol:disulfide interch 97.5 0.00017 6E-09 53.9 5.8 41 93-135 20-60 (184)
255 2ec4_A FAS-associated factor 1 97.5 0.001 3.5E-08 50.3 10.0 108 91-213 52-168 (178)
256 3l9s_A Thiol:disulfide interch 97.4 0.00034 1.1E-08 53.5 6.8 42 93-136 20-64 (191)
257 1un2_A DSBA, thiol-disulfide i 97.4 4.1E-05 1.4E-09 59.0 1.4 43 93-137 112-157 (197)
258 2cq9_A GLRX2 protein, glutared 97.1 0.0033 1.1E-07 44.8 8.3 32 98-137 29-60 (130)
259 2hze_A Glutaredoxin-1; thiored 97.0 0.0012 4.2E-08 45.8 5.8 25 95-120 18-42 (114)
260 2klx_A Glutaredoxin; thioredox 97.0 0.002 6.9E-08 42.4 6.1 33 97-137 7-39 (89)
261 2ht9_A Glutaredoxin-2; thiored 96.9 0.0037 1.3E-07 45.6 7.5 22 98-120 51-72 (146)
262 1kte_A Thioltransferase; redox 96.8 0.00035 1.2E-08 47.5 1.6 25 96-121 12-36 (105)
263 3qmx_A Glutaredoxin A, glutare 96.7 0.0046 1.6E-07 41.9 6.7 41 95-143 15-55 (99)
264 2yan_A Glutaredoxin-3; oxidore 96.6 0.0085 2.9E-07 40.8 7.3 34 96-138 18-56 (105)
265 1fov_A Glutaredoxin 3, GRX3; a 96.6 0.0065 2.2E-07 38.9 6.3 33 98-138 3-35 (82)
266 2lqo_A Putative glutaredoxin R 96.4 0.006 2.1E-07 40.8 5.5 40 97-144 5-44 (92)
267 2khp_A Glutaredoxin; thioredox 96.4 0.0094 3.2E-07 39.2 6.3 34 97-138 7-40 (92)
268 3f4s_A Alpha-DSBA1, putative u 96.4 0.0065 2.2E-07 47.6 6.2 46 89-135 34-81 (226)
269 3rhb_A ATGRXC5, glutaredoxin-C 96.4 0.0062 2.1E-07 41.9 5.4 32 98-137 21-52 (113)
270 4f9z_D Endoplasmic reticulum r 96.2 0.051 1.7E-06 42.1 10.4 77 94-196 130-207 (227)
271 3nzn_A Glutaredoxin; structura 96.2 0.019 6.3E-07 38.9 6.9 25 95-120 21-45 (103)
272 3h8q_A Thioredoxin reductase 3 96.1 0.036 1.2E-06 38.2 8.4 32 98-137 19-50 (114)
273 3msz_A Glutaredoxin 1; alpha-b 96.0 0.018 6.2E-07 37.3 6.0 22 97-119 5-26 (89)
274 3gha_A Disulfide bond formatio 95.9 0.021 7.3E-07 43.6 6.9 47 89-136 24-72 (202)
275 3c1r_A Glutaredoxin-1; oxidize 95.9 0.013 4.3E-07 40.9 5.0 36 97-137 26-62 (118)
276 3ic4_A Glutaredoxin (GRX-1); s 95.8 0.021 7.2E-07 37.4 5.8 23 97-120 13-35 (92)
277 3c7m_A Thiol:disulfide interch 95.5 0.029 1E-06 42.0 6.2 43 93-137 16-59 (195)
278 1wik_A Thioredoxin-like protei 95.3 0.061 2.1E-06 36.7 6.9 29 105-140 28-56 (109)
279 3kzq_A Putative uncharacterize 95.1 0.09 3.1E-06 40.0 8.0 37 97-135 4-40 (208)
280 3tdg_A DSBG, putative uncharac 94.8 0.062 2.1E-06 43.2 6.3 40 93-136 146-185 (273)
281 1aba_A Glutaredoxin; electron 94.6 0.14 4.9E-06 33.1 6.9 32 98-137 2-37 (87)
282 2ct6_A SH3 domain-binding glut 94.6 0.18 6.2E-06 34.5 7.7 49 98-148 10-58 (111)
283 3ctg_A Glutaredoxin-2; reduced 94.6 0.034 1.1E-06 39.4 3.9 21 98-119 39-60 (129)
284 3fz4_A Putative arsenate reduc 94.0 0.14 4.8E-06 35.7 6.1 63 100-169 6-72 (120)
285 3l78_A Regulatory protein SPX; 93.6 0.14 4.8E-06 35.7 5.6 64 99-170 3-70 (120)
286 3bci_A Disulfide bond protein 93.4 0.15 5.1E-06 37.9 5.8 42 93-135 10-53 (186)
287 1z3e_A Regulatory protein SPX; 93.3 0.14 4.6E-06 36.4 5.1 65 98-170 3-71 (132)
288 2wem_A Glutaredoxin-related pr 93.1 0.17 5.8E-06 35.2 5.3 35 106-147 34-69 (118)
289 3q6o_A Sulfhydryl oxidase 1; p 93.1 0.087 3E-06 41.1 4.2 53 151-211 185-237 (244)
290 3zyw_A Glutaredoxin-3; metal b 93.1 0.12 4.2E-06 35.5 4.4 35 105-146 29-63 (111)
291 1t1v_A SH3BGRL3, SH3 domain-bi 93.0 0.43 1.5E-05 31.2 7.0 45 98-144 4-48 (93)
292 3gkx_A Putative ARSC family re 92.6 0.14 4.7E-06 35.8 4.2 62 101-169 8-73 (120)
293 3rdw_A Putative arsenate reduc 92.6 0.18 6E-06 35.3 4.7 64 100-170 8-76 (121)
294 3gx8_A Monothiol glutaredoxin- 92.5 0.41 1.4E-05 33.3 6.6 35 106-147 30-67 (121)
295 1pn0_A Phenol 2-monooxygenase; 92.4 0.71 2.4E-05 41.7 9.7 124 66-196 477-630 (665)
296 2wci_A Glutaredoxin-4; redox-a 92.4 0.19 6.4E-06 35.9 4.7 34 96-137 36-73 (135)
297 3gn3_A Putative protein-disulf 92.3 0.18 6.2E-06 37.8 4.9 42 93-135 13-54 (182)
298 2dkh_A 3-hydroxybenzoate hydro 92.0 0.55 1.9E-05 42.1 8.5 125 66-197 465-623 (639)
299 3f0i_A Arsenate reductase; str 92.0 0.18 6.1E-06 35.2 4.2 66 99-171 6-76 (119)
300 3ipz_A Monothiol glutaredoxin- 91.9 0.21 7.2E-06 34.0 4.4 26 106-138 32-57 (109)
301 2kok_A Arsenate reductase; bru 91.8 0.48 1.7E-05 32.8 6.3 61 98-168 7-71 (120)
302 2l4c_A Endoplasmic reticulum r 91.8 1.3 4.5E-05 30.8 8.6 82 94-213 39-120 (124)
303 1s3c_A Arsenate reductase; ARS 91.7 0.18 6.3E-06 36.2 4.0 64 101-171 6-73 (141)
304 3l4n_A Monothiol glutaredoxin- 91.3 0.5 1.7E-05 33.2 6.0 48 98-148 16-64 (127)
305 3gmf_A Protein-disulfide isome 91.3 0.63 2.2E-05 35.5 7.0 47 88-135 9-57 (205)
306 1u6t_A SH3 domain-binding glut 90.7 1.7 6E-05 30.2 8.1 50 98-149 2-52 (121)
307 3ihg_A RDME; flavoenzyme, anth 90.2 2.3 7.8E-05 36.9 10.5 113 66-212 418-532 (535)
308 1sji_A Calsequestrin 2, calseq 88.8 2.7 9.4E-05 34.3 9.4 40 96-136 247-287 (350)
309 1rw1_A Conserved hypothetical 88.6 0.52 1.8E-05 32.3 4.1 60 99-168 3-66 (114)
310 1nm3_A Protein HI0572; hybrid, 87.6 0.82 2.8E-05 35.3 5.2 34 96-137 170-203 (241)
311 2axo_A Hypothetical protein AT 86.0 2.7 9.3E-05 33.5 7.4 37 96-136 44-80 (270)
312 3us3_A Calsequestrin-1; calciu 85.6 3.5 0.00012 34.0 8.3 72 95-190 248-320 (367)
313 2in3_A Hypothetical protein; D 85.0 4.5 0.00015 30.3 8.1 39 96-136 8-46 (216)
314 3ghf_A Septum site-determining 83.0 2.4 8.3E-05 29.4 5.2 55 92-153 45-99 (120)
315 3t58_A Sulfhydryl oxidase 1; o 77.4 4.1 0.00014 35.6 6.0 40 149-195 183-222 (519)
316 2wul_A Glutaredoxin related pr 76.9 3.8 0.00013 28.3 4.6 37 105-148 33-70 (118)
317 4ev1_A Anabena TIC22; TIC22 fo 76.5 17 0.00056 28.6 8.7 103 72-178 12-134 (252)
318 3ga8_A HTH-type transcriptiona 71.8 2.1 7.1E-05 27.2 2.0 37 91-127 23-65 (78)
319 2lqo_A Putative glutaredoxin R 71.7 13 0.00043 24.2 6.0 44 140-192 18-67 (92)
320 4f9z_D Endoplasmic reticulum r 70.2 5.3 0.00018 30.4 4.5 57 94-188 27-83 (227)
321 2h8l_A Protein disulfide-isome 70.2 34 0.0012 26.2 12.7 81 94-199 129-214 (252)
322 4gxt_A A conserved functionall 69.3 10 0.00035 31.7 6.3 42 111-152 220-261 (385)
323 3j21_Z 50S ribosomal protein L 65.4 26 0.00088 23.0 7.5 52 119-170 22-77 (99)
324 3ktb_A Arsenical resistance op 64.7 29 0.001 23.4 8.3 39 98-136 7-51 (106)
325 2imf_A HCCA isomerase, 2-hydro 62.8 36 0.0012 25.0 7.8 35 99-136 3-37 (203)
326 4g6x_A Glyoxalase/bleomycin re 62.5 36 0.0012 23.6 7.4 54 126-196 96-150 (155)
327 4e6z_A Apicoplast TIC22, putat 59.6 10 0.00034 30.4 4.2 62 72-141 75-140 (279)
328 2x8g_A Thioredoxin glutathione 56.3 12 0.0004 33.0 4.5 22 97-119 19-40 (598)
329 4g9p_A 4-hydroxy-3-methylbut-2 56.0 13 0.00043 31.4 4.3 91 107-214 297-396 (406)
330 2g2q_A Glutaredoxin-2; thiored 55.1 4.2 0.00014 28.1 1.1 36 95-136 2-37 (124)
331 3qmx_A Glutaredoxin A, glutare 52.7 44 0.0015 21.6 6.0 43 140-192 30-78 (99)
332 2jvx_A NF-kappa-B essential mo 52.5 1 3.4E-05 22.9 -1.8 20 107-126 6-25 (28)
333 3kgk_A Arsenical resistance op 51.7 53 0.0018 22.2 8.5 38 99-136 5-48 (110)
334 3iz5_f 60S ribosomal protein L 50.8 54 0.0019 22.1 7.3 59 123-187 37-99 (112)
335 1w41_A 50S ribosomal protein L 50.7 49 0.0017 21.6 8.1 52 119-170 23-78 (101)
336 3vw9_A Lactoylglutathione lyas 50.6 57 0.0019 23.2 7.0 54 128-197 127-180 (187)
337 3ec3_A Protein disulfide-isome 49.7 83 0.0028 23.9 9.1 57 94-187 25-81 (250)
338 2c21_A Trypanothione-dependent 49.5 57 0.0019 22.0 7.6 49 128-196 77-126 (144)
339 3r6a_A Uncharacterized protein 48.7 48 0.0016 22.8 6.1 52 129-197 66-118 (144)
340 2in3_A Hypothetical protein; D 48.6 16 0.00056 27.1 3.7 66 136-210 129-206 (216)
341 2jad_A Yellow fluorescent prot 48.0 7.3 0.00025 32.4 1.7 16 98-114 263-278 (362)
342 1l6r_A Hypothetical protein TA 47.7 35 0.0012 25.7 5.5 40 118-157 28-67 (227)
343 3l7t_A SMU.1112C, putative unc 46.5 56 0.0019 21.1 6.0 53 128-195 81-133 (134)
344 3ec3_A Protein disulfide-isome 45.8 97 0.0033 23.5 8.6 71 93-190 131-205 (250)
345 3u5e_c L32, RP73, YL38, 60S ri 44.9 65 0.0022 21.3 6.9 50 122-171 32-85 (105)
346 3bj5_A Protein disulfide-isome 44.6 78 0.0027 22.1 9.6 69 94-187 31-99 (147)
347 2obb_A Hypothetical protein; s 44.0 29 0.00099 24.6 4.2 41 119-159 31-74 (142)
348 2p25_A Glyoxalase family prote 43.6 62 0.0021 20.7 5.8 53 128-195 73-125 (126)
349 2pr7_A Haloacid dehalogenase/e 43.3 16 0.00056 24.3 2.8 41 111-151 17-57 (137)
350 3mpo_A Predicted hydrolase of 43.0 1.1E+02 0.0036 23.2 8.6 36 117-152 27-62 (279)
351 3cwf_A Alkaline phosphatase sy 42.7 25 0.00085 23.5 3.6 15 181-195 50-64 (122)
352 4hde_A SCO1/SENC family lipopr 41.2 12 0.0004 27.0 1.8 85 76-167 24-150 (170)
353 2za0_A Glyoxalase I; lyase, la 40.5 95 0.0032 21.9 7.3 54 128-197 124-177 (184)
354 3fmw_A Oxygenase; mithramycin, 39.7 9.6 0.00033 33.5 1.3 36 67-102 444-481 (570)
355 3v7q_A Probable ribosomal prot 39.6 78 0.0027 20.7 6.7 49 122-171 29-81 (101)
356 3fvv_A Uncharacterized protein 38.4 76 0.0026 23.1 6.1 39 114-152 94-132 (232)
357 1f9z_A Glyoxalase I; beta-alph 38.3 81 0.0028 20.5 7.7 56 128-197 71-126 (135)
358 2v2f_A Penicillin binding prot 37.4 19 0.00065 17.2 1.7 15 181-195 6-20 (26)
359 4as2_A Phosphorylcholine phosp 37.0 29 0.00099 28.2 3.7 41 112-152 143-187 (327)
360 3klb_A Putative flavoprotein; 36.9 88 0.003 22.1 6.0 54 91-151 105-162 (162)
361 2p9j_A Hypothetical protein AQ 36.8 88 0.003 21.5 6.0 34 119-152 43-76 (162)
362 2l82_A Designed protein OR32; 36.0 1E+02 0.0034 20.9 6.2 42 116-158 67-111 (162)
363 2jnb_A NHP2-like protein 1; sp 36.0 73 0.0025 22.6 5.2 58 125-189 63-125 (144)
364 2aif_A Ribosomal protein L7A; 35.7 1.1E+02 0.0037 21.2 8.6 55 128-189 57-116 (135)
365 3cpq_A 50S ribosomal protein L 35.3 97 0.0033 20.5 7.6 49 122-170 31-83 (110)
366 2a2p_A Selenoprotein M, SELM p 34.6 38 0.0013 23.7 3.4 34 175-213 54-87 (129)
367 4a18_G RPL30; ribosome, eukary 34.4 97 0.0033 20.3 7.3 62 120-187 30-95 (104)
368 2rk9_A Glyoxalase/bleomycin re 34.4 1E+02 0.0036 20.6 6.8 61 128-197 74-135 (145)
369 1xhj_A Nitrogen fixation prote 34.3 93 0.0032 20.0 5.5 32 83-115 26-59 (88)
370 3m2o_A Glyoxalase/bleomycin re 34.2 1.2E+02 0.004 21.1 7.4 51 131-197 93-144 (164)
371 3ibs_A Conserved hypothetical 34.0 1.2E+02 0.0039 22.1 6.5 36 97-137 113-148 (218)
372 2r2j_A Thioredoxin domain-cont 33.9 41 0.0014 27.5 4.2 42 94-137 236-278 (382)
373 2pjs_A AGR_C_3564P, uncharacte 33.8 92 0.0032 19.8 5.8 53 128-196 64-117 (119)
374 3bid_A UPF0339 protein NMB1088 33.2 67 0.0023 19.3 4.0 33 181-214 14-46 (64)
375 2qqz_A Glyoxalase family prote 33.0 1E+02 0.0034 20.0 5.7 52 128-196 72-123 (126)
376 2ale_A SNU13, NHP2/L7AE family 32.9 1.2E+02 0.0042 21.0 7.9 56 125-187 45-105 (134)
377 2h8l_A Protein disulfide-isome 32.7 1.2E+02 0.004 23.0 6.5 36 94-134 24-59 (252)
378 3mjh_B Early endosome antigen 31.4 3.6 0.00012 21.8 -1.8 20 107-126 8-27 (34)
379 1rkq_A Hypothetical protein YI 31.3 1.8E+02 0.006 22.3 7.8 31 122-152 32-62 (282)
380 3umv_A Deoxyribodipyrimidine p 31.2 2.2E+02 0.0076 24.5 8.5 44 112-156 92-135 (506)
381 3kol_A Oxidoreductase, glyoxal 31.2 1.2E+02 0.004 20.2 7.5 53 128-197 96-151 (156)
382 3pdk_A Phosphoglucosamine muta 30.8 1.8E+02 0.0062 24.7 7.8 48 127-192 217-277 (469)
383 2a4h_A Selenoprotein SEP15; re 30.8 43 0.0015 23.2 3.1 34 174-209 59-92 (126)
384 3o85_A Ribosomal protein L7AE; 30.7 1.3E+02 0.0043 20.5 7.5 59 124-189 43-106 (122)
385 2jya_A AGR_C_3324P, uncharacte 30.4 41 0.0014 22.7 2.9 31 129-159 51-81 (106)
386 2j07_A Deoxyribodipyrimidine p 30.2 1.3E+02 0.0044 25.2 6.7 45 112-156 49-93 (420)
387 2k9k_A TONB2; metal transport; 29.3 46 0.0016 21.8 3.1 33 181-213 44-77 (106)
388 2xry_A Deoxyribodipyrimidine p 29.2 1.3E+02 0.0045 25.6 6.7 45 112-156 89-133 (482)
389 2gjf_A Designed protein; proca 29.1 84 0.0029 19.2 4.2 27 132-158 51-77 (78)
390 1u07_A TONB protein; beta-hair 29.0 47 0.0016 21.0 3.0 46 163-214 17-63 (90)
391 1r4w_A Glutathione S-transfera 28.7 55 0.0019 24.5 3.9 34 99-135 8-41 (226)
392 2fpr_A Histidine biosynthesis 28.5 91 0.0031 22.1 4.9 44 113-156 43-101 (176)
393 2wm8_A MDP-1, magnesium-depend 28.5 72 0.0025 22.7 4.4 39 114-152 70-109 (187)
394 4ici_A Putative flavoprotein; 28.5 89 0.003 22.4 4.8 14 138-151 157-170 (171)
395 3on1_A BH2414 protein; structu 28.0 1.3E+02 0.0043 19.6 6.5 49 122-171 28-80 (101)
396 1nrw_A Hypothetical protein, h 27.9 1.2E+02 0.004 23.3 5.8 37 121-157 30-66 (288)
397 1k1e_A Deoxy-D-mannose-octulos 27.9 1.5E+02 0.0052 20.8 6.1 34 120-153 43-76 (180)
398 2a4x_A Mitomycin-binding prote 27.8 1.3E+02 0.0046 19.8 6.3 56 128-198 71-129 (138)
399 3e58_A Putative beta-phosphogl 27.7 95 0.0033 21.8 5.0 39 114-152 91-129 (214)
400 3gl5_A Putative DSBA oxidoredu 26.9 81 0.0028 24.0 4.6 39 98-136 4-43 (239)
401 1wr8_A Phosphoglycolate phosph 26.6 1.3E+02 0.0043 22.3 5.6 39 118-156 26-64 (231)
402 2gx5_A GTP-sensing transcripti 26.6 82 0.0028 23.0 4.2 17 181-197 48-64 (170)
403 1vjq_A Designed protein; struc 26.4 46 0.0016 20.5 2.5 32 132-163 43-74 (79)
404 2b30_A Pvivax hypothetical pro 26.1 1.5E+02 0.0051 23.1 6.2 31 122-152 55-88 (301)
405 2pib_A Phosphorylated carbohyd 25.6 1E+02 0.0035 21.6 4.8 37 116-152 88-124 (216)
406 1nnl_A L-3-phosphoserine phosp 25.1 65 0.0022 23.4 3.6 38 115-152 89-126 (225)
407 1r4w_A Glutathione S-transfera 24.9 1E+02 0.0036 22.9 4.8 65 136-213 132-211 (226)
408 1xty_A PTH, peptidyl-tRNA hydr 24.8 1.6E+02 0.0056 19.9 6.1 43 118-160 43-88 (120)
409 3r4q_A Lactoylglutathione lyas 24.7 1E+02 0.0035 21.2 4.5 54 128-197 76-132 (160)
410 1owl_A Photolyase, deoxyribodi 24.6 1.6E+02 0.0054 25.1 6.4 44 113-156 55-98 (484)
411 3m9l_A Hydrolase, haloacid deh 24.2 1.2E+02 0.0039 21.6 4.9 37 116-152 74-110 (205)
412 3i3w_A Phosphoglucosamine muta 24.2 2.4E+02 0.0083 23.6 7.4 22 139-160 220-241 (443)
413 2gk4_A Conserved hypothetical 24.1 2.4E+02 0.0083 21.5 6.9 69 128-214 154-229 (232)
414 4hoj_A REGF protein; GST, glut 23.8 45 0.0015 24.3 2.5 32 100-136 5-36 (210)
415 1zcc_A Glycerophosphodiester p 23.7 1.4E+02 0.0048 22.7 5.4 37 119-155 185-221 (248)
416 2lju_A Putative oxidoreductase 23.6 62 0.0021 21.8 2.8 27 133-159 63-89 (108)
417 2r0c_A REBC; flavin adenine di 23.2 3.5E+02 0.012 23.1 10.4 32 67-102 449-481 (549)
418 2qa2_A CABE, polyketide oxygen 23.1 61 0.0021 27.7 3.5 34 68-102 395-430 (499)
419 3ib6_A Uncharacterized protein 23.0 1.1E+02 0.0039 21.7 4.6 39 114-152 36-77 (189)
420 3hdp_A Glyoxalase-I; glutathio 22.9 1.1E+02 0.0036 20.0 4.1 56 127-195 76-131 (133)
421 3g12_A Putative lactoylglutath 22.7 1.7E+02 0.0057 19.2 6.1 51 130-197 68-120 (128)
422 1q7s_A BIT1, protein CGI-147; 22.7 1.8E+02 0.0062 19.6 6.1 41 119-159 41-84 (117)
423 2j4d_A Cryptochrome 3, cryptoc 22.4 1.6E+02 0.0053 25.5 5.9 44 112-155 97-140 (525)
424 2gmw_A D,D-heptose 1,7-bisphos 22.4 1.2E+02 0.0041 22.1 4.7 40 114-153 52-106 (211)
425 2r6u_A Uncharacterized protein 22.0 1.9E+02 0.0065 19.6 6.6 53 128-197 91-144 (148)
426 3ghj_A Putative integron gene 22.0 1.2E+02 0.0042 20.3 4.4 53 128-195 85-139 (141)
427 1np7_A DNA photolyase; protein 21.4 1.6E+02 0.0055 25.1 5.8 41 112-152 62-102 (489)
428 2nyv_A Pgpase, PGP, phosphogly 21.3 1.4E+02 0.0048 21.6 4.9 36 117-152 88-123 (222)
429 2i7r_A Conserved domain protei 21.3 1.6E+02 0.0056 18.5 6.9 49 131-195 66-115 (118)
430 3hju_A Monoglyceride lipase; a 21.3 2.5E+02 0.0084 21.4 6.6 59 72-136 32-95 (342)
431 1ecs_A Bleomycin resistance pr 21.0 1.8E+02 0.006 18.8 7.9 57 128-197 58-119 (126)
432 2hsz_A Novel predicted phospha 20.9 1.4E+02 0.0048 22.0 4.9 37 116-152 118-154 (243)
433 3s6j_A Hydrolase, haloacid deh 20.9 1.1E+02 0.0038 21.9 4.2 37 116-152 95-131 (233)
434 3pdw_A Uncharacterized hydrola 20.8 2.6E+02 0.009 20.7 7.4 56 95-152 7-65 (266)
435 3um9_A Haloacid dehalogenase, 20.8 1.4E+02 0.0048 21.3 4.8 36 117-152 101-136 (230)
436 1twu_A Hypothetical protein YY 20.5 1.6E+02 0.0053 19.4 4.7 54 128-197 77-133 (139)
437 3pe6_A Monoglyceride lipase; a 20.5 2.3E+02 0.0079 20.7 6.1 57 74-136 16-77 (303)
438 4hi4_A Aerotaxis transducer AE 20.4 62 0.0021 20.8 2.4 15 181-195 17-31 (121)
439 3kts_A Glycerol uptake operon 20.3 1.3E+02 0.0046 22.3 4.4 66 116-189 42-115 (192)
440 3itw_A Protein TIOX; bleomycin 20.0 1.9E+02 0.0066 18.8 5.7 17 181-197 106-122 (137)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=100.00 E-value=1.1e-34 Score=219.21 Aligned_cols=148 Identities=41% Similarity=0.604 Sum_probs=125.8
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHH
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFA 146 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~ 146 (215)
.+++|+++|+|+++|.+|+.++|++++||++||+||+++||++|..+++.|+++++++++.|+++++|+.|+++.+++|+
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~ 82 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFK 82 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHH
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCeEEEEcCChhHHHHhCCCccCCC----CCCccEEEEEcCCCcEEEEEeCCC-CCCccHHHHHHHHhc
Q 028030 147 KKYRLPYTLLSDEGNKVRKEWGVPADFFG----SLPGRQTYILDKNGVVQLIYNNQF-QPEKHIDETLKFLQS 214 (215)
Q Consensus 147 ~~~~~~~~~~~d~~~~~~~~~g~~~~~~g----~~p~~~~~lid~~G~v~~~~~g~~-~~~~~~~~il~~l~~ 214 (215)
++++++|+++.|++++++++||+.....+ .++.|++||||++|+|++.+.+.. ..+.+.+++++.|++
T Consensus 83 ~~~~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 83 EHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp HHTTCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred HHcCCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999643222 123458999999999999987643 344578888888874
No 2
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=100.00 E-value=3.3e-32 Score=205.94 Aligned_cols=144 Identities=42% Similarity=0.775 Sum_probs=132.9
Q ss_pred CCCCCCCCCeEEeCCCCCeeecCCcCCCc-EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHH
Q 028030 68 VSKGQAPPSFTLKDQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFA 146 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~~g~~~~l~~~~gk~-~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~ 146 (215)
+++|+++|+|++.+.+|+.+++++++||+ +||+||+++||++|+.+++.|++++++|+++|++||+|+.|+++.+++|+
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~ 81 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFK 81 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence 57899999999999999999999999998 99999999999999999999999999999989999999999999999999
Q ss_pred HHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 147 KKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 147 ~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
++++++|+++.|.+.++.+.||+.+. ...+| ++||||++|+|++.+.|.......++++++.|++
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~v~~~-~~~~P--~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 82 EKYKLPFILVSDPDKKIRELYGAKGF-ILPAR--ITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp HHTTCCSEEEECTTSHHHHHTTCCCS-SSCCC--EEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHH
T ss_pred HHhCCCceEEECCcHHHHHHcCCCCc-Ccccc--eEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999852 22356 9999999999999999976677788888888764
No 3
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=100.00 E-value=2.1e-34 Score=219.27 Aligned_cols=148 Identities=33% Similarity=0.534 Sum_probs=130.8
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCc--CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHH
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKF--KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKA 144 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~--~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 144 (215)
.+++|+++|+|+++|.+|+.++|+++ +||++||+||+++||++|..+++.|++++++|+++|+++++|+.|+++.+++
T Consensus 4 ml~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~ 83 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKK 83 (164)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHH
T ss_pred cccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHH
Confidence 47899999999999999999999998 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEcCChhHHHHhCCCccCCC---CCCccEEEEEcCCCcEEEEEeCCCC-CCccHHHHHHHHhc
Q 028030 145 FAKKYRLPYTLLSDEGNKVRKEWGVPADFFG---SLPGRQTYILDKNGVVQLIYNNQFQ-PEKHIDETLKFLQS 214 (215)
Q Consensus 145 ~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g---~~p~~~~~lid~~G~v~~~~~g~~~-~~~~~~~il~~l~~ 214 (215)
|.++++++|+++.|++++++++||+.....+ .++.|++||||++|+|++.+.+... ...+.+++++.|++
T Consensus 84 ~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 157 (164)
T 4gqc_A 84 FKDENRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANK 157 (164)
T ss_dssp HHHHTTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHH
T ss_pred HHHhcCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999643221 1234489999999999999876433 34578888887763
No 4
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.98 E-value=1e-31 Score=203.15 Aligned_cols=146 Identities=28% Similarity=0.506 Sum_probs=130.2
Q ss_pred ccCCCCCCCCCeE--EeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHH
Q 028030 66 AKVSKGQAPPSFT--LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHK 143 (215)
Q Consensus 66 ~~~~~g~~~P~f~--l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 143 (215)
..+.+|+++|+|+ +.+.+|+++++++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+++.++
T Consensus 5 ~~l~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~ 84 (163)
T 3gkn_A 5 TDAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHD 84 (163)
T ss_dssp CCCCCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred cccccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence 4578999999999 99999999999999999999999955999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCeEEEEcCChhHHHHhCCCccC--CC-----CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 144 AFAKKYRLPYTLLSDEGNKVRKEWGVPADF--FG-----SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 144 ~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~--~g-----~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+|+++++++|+++.|.++++.+.||+.... .| ..| ++||||++|+|++.+.+ ......++++++.|++
T Consensus 85 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p--~~~lid~~G~i~~~~~~-~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 85 NFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIER--STFLLSPEGQVVQAWRK-VKVAGHADAVLAALKA 159 (163)
T ss_dssp HHHHHHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECC--EEEEECTTSCEEEEECS-CCSTTHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEECCcHHHHHHhCCccccccccccccCcce--EEEEECCCCeEEEEEcC-CCcccCHHHHHHHHHH
Confidence 999999999999999999999999997521 11 155 99999999999999944 4555677888887764
No 5
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.97 E-value=4.8e-32 Score=208.82 Aligned_cols=146 Identities=24% Similarity=0.411 Sum_probs=129.9
Q ss_pred ccCCCCCC----CCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHH
Q 028030 66 AKVSKGQA----PPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSS 141 (215)
Q Consensus 66 ~~~~~g~~----~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 141 (215)
..+++|+. +|+|+++|.+|++++|++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+++.
T Consensus 19 ~~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~ 98 (179)
T 3ixr_A 19 SHMNIGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKS 98 (179)
T ss_dssp CSSCTTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHH
T ss_pred cccCcCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 56778888 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeEEEEcCChhHHHHhCCCccCC--C-----CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 142 HKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFF--G-----SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 142 ~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~--g-----~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+++|+++++++|+++.|.++++.+.||+..... | ..| ++||||++|+|++.+.+ ......++++++.|++
T Consensus 99 ~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p--~~~lID~~G~I~~~~~~-~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 99 HDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIER--STFLIGPTHRIVEAWRQ-VKVPGHAEEVLNKLKA 175 (179)
T ss_dssp HHHHHHHHTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECC--EEEEECTTSBEEEEECS-CCSTTHHHHHHHHHHH
T ss_pred HHHHHHHcCCceEEEECCchHHHHHcCCcccccccCcccCCcce--EEEEECCCCEEEEEEcC-CCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999975211 1 234 99999999999999954 4556677888887763
No 6
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-31 Score=210.58 Aligned_cols=148 Identities=28% Similarity=0.417 Sum_probs=134.2
Q ss_pred ccCCCCCCCCCeEEe---CCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHH
Q 028030 66 AKVSKGQAPPSFTLK---DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSH 142 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~---~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 142 (215)
..+++|+++|||+++ |.++++++|+|++||++||+|||++||+.|..++..|++++++|++.|++||+||.|+.+.+
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh 100 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSL 100 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred chhhcCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhH
Confidence 446899999999976 66778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 143 KAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 143 ~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
++|.+.. +++||++.|.++++.++||+.....| ++.|.+||||++|+|++.+..+.....+++++|+.|+.
T Consensus 101 ~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g-~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 101 LAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEG-VALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEA 178 (216)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTT-EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCC-ceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 9999765 47899999999999999999865544 56679999999999999988877788999999998874
No 7
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.97 E-value=7.3e-31 Score=198.99 Aligned_cols=146 Identities=18% Similarity=0.319 Sum_probs=129.1
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAF 145 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 145 (215)
..+++|+++|+|++++.+|+.+++++++||++||+||+++||++|..+++.|++++++| ++++||+|+.|+++.+++|
T Consensus 14 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~ 91 (163)
T 1psq_A 14 KQLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRW 91 (163)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHH
Confidence 35689999999999999999999999999999999997799999999999999999999 6899999999999999999
Q ss_pred HHHcCC-CeEEEEc-CChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCC-CCCCccHHHHHHHHhc
Q 028030 146 AKKYRL-PYTLLSD-EGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQ-FQPEKHIDETLKFLQS 214 (215)
Q Consensus 146 ~~~~~~-~~~~~~d-~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~-~~~~~~~~~il~~l~~ 214 (215)
++++++ +|+++.| .++++.+.||+.....| ++.|++||||++|+|++.+.|. .......+++++.|++
T Consensus 92 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g-~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 92 CGAEGLDNAIMLSDYFDHSFGRDYALLINEWH-LLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp HHHHTCTTSEEEECTTTCHHHHHHTCBCTTTC-SBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred HHhcCCCCcEEecCCchhHHHHHhCCccccCC-ceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 999999 9999999 88999999999853223 3334999999999999999874 3345667888888864
No 8
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.97 E-value=1.1e-30 Score=198.50 Aligned_cols=145 Identities=23% Similarity=0.317 Sum_probs=129.4
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAF 145 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 145 (215)
..+++|+++|+|+++|.+|+.+++++++||++||+||+++||++|..+++.|++++++ +|++||+|+.|+++.+++|
T Consensus 18 ~~l~~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~~ 94 (166)
T 3p7x_A 18 QQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKRW 94 (166)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHHH
T ss_pred ccCCCCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999887 6899999999999999999
Q ss_pred HHHcCC-CeEEEEcC-ChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCC-CCCCccHHHHHHHHhc
Q 028030 146 AKKYRL-PYTLLSDE-GNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQ-FQPEKHIDETLKFLQS 214 (215)
Q Consensus 146 ~~~~~~-~~~~~~d~-~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~-~~~~~~~~~il~~l~~ 214 (215)
++++++ +|+++.|. ++++.+.||+.....| .+.|++||||++|+|++.+.+. ...+.+.+++++.|++
T Consensus 95 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 95 CASAGLDNVITLSDHRDLSFGENYGVVMEELR-LLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp HHHHTCSSCEEEECTTTCHHHHHHTCEETTTT-EECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred HHHcCCCceEEccCCchhHHHHHhCCccccCC-ceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 999999 89999999 8999999999854333 2234999999999999997653 4456778999998875
No 9
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.97 E-value=5e-31 Score=198.64 Aligned_cols=146 Identities=25% Similarity=0.428 Sum_probs=132.6
Q ss_pred CCCCCCCCCeEEeCCCCCeeecCCcCCC-cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHH
Q 028030 68 VSKGQAPPSFTLKDQEGRNVSLSKFKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFA 146 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~~g~~~~l~~~~gk-~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~ 146 (215)
+.+|+++|+|++.+.+|+.+++++++|| ++||+||+++||++|+.+++.|++++++|++++++|++|+.|+++.+++|+
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~ 88 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWA 88 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHH
Confidence 7899999999999999999999999998 999999889999999999999999999998889999999999999999999
Q ss_pred HHcCCCeEEEEcC--ChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 147 KKYRLPYTLLSDE--GNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 147 ~~~~~~~~~~~d~--~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
++++++|+++.|. ++++.+.||+..... .+|.+++||||++|+|++.+.|.......++++++.|++
T Consensus 89 ~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~-~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 89 TQSGFTFPLLSDFWPHGAVSQAYGVFNEQA-GIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp HHHTCCSCEEECTTTTTHHHHHTTCEETTT-TEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred HhcCCCceEEecCCcChHHHHHcCCccccC-CCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 9999999999995 889999999983211 177779999999999999999976666688888888764
No 10
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.97 E-value=6.4e-31 Score=209.18 Aligned_cols=146 Identities=27% Similarity=0.380 Sum_probs=127.4
Q ss_pred cccCCCCCCCCCeEEeCC--CC--CeeecCCc-CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCH
Q 028030 65 SAKVSKGQAPPSFTLKDQ--EG--RNVSLSKF-KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDS 139 (215)
Q Consensus 65 ~~~~~~g~~~P~f~l~~~--~g--~~~~l~~~-~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~ 139 (215)
+..+++|+++|+|++++. +| +.++++++ +||++||+||+++||++|+.+++.|++++++|+++|++||+|+.|++
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~ 101 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSV 101 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 345789999999999998 99 99999999 99999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHH
Q 028030 140 SSHKAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKF 211 (215)
Q Consensus 140 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~ 211 (215)
+.+++|++++ +++|+++.|.++++.+.||+. ...| .+| ++||||++|+|++.+.+....+...+++++.
T Consensus 102 ~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~g~~~P--~~~lID~~G~I~~~~~g~~~~~~~~~ell~~ 178 (221)
T 2c0d_A 102 YSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDNSFALR--GLFIIDKNGCVRHQTVNDLPIGRNVQEVLRT 178 (221)
T ss_dssp HHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETTTEECE--EEEEECTTSBEEEEEEECTTCCCCHHHHHHH
T ss_pred HHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccCCCccc--eEEEECCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 9999999988 789999999999999999996 2222 256 9999999999999988765445566777776
Q ss_pred Hh
Q 028030 212 LQ 213 (215)
Q Consensus 212 l~ 213 (215)
|+
T Consensus 179 l~ 180 (221)
T 2c0d_A 179 ID 180 (221)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 11
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.97 E-value=8.4e-31 Score=200.97 Aligned_cols=145 Identities=24% Similarity=0.373 Sum_probs=125.1
Q ss_pred ccCCCCCCCCCeEEe-CCCCCeeecCC-cCCCcEEEEEEcCCCChhhH-HHHHHHHHHHHHHHHcCcEEEE-EeCCCHHH
Q 028030 66 AKVSKGQAPPSFTLK-DQEGRNVSLSK-FKGKPVVVYFYPADETPGCT-KQACAFRDSYEKFKKAGAEVIG-ISGDDSSS 141 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~-~~~g~~~~l~~-~~gk~~ll~f~~a~~C~~C~-~~~~~l~~l~~~~~~~~v~vv~-vs~d~~~~ 141 (215)
..+++|+++|+|+++ +.+|++++|++ ++||++||+||+++||++|. .+++.|++++++|+++|+++|+ |+.|+++.
T Consensus 13 ~~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~ 92 (173)
T 3mng_A 13 APIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFV 92 (173)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHH
T ss_pred CCCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHH
Confidence 557899999999999 99999999999 59999888888899999999 5999999999999999999997 99999999
Q ss_pred HHHHHHHcCCC--eEEEEcCChhHHHHhCCCccC-----CC-CCCccEEEEEcCCCcEEEEEeCCCCCCcc---HHHHHH
Q 028030 142 HKAFAKKYRLP--YTLLSDEGNKVRKEWGVPADF-----FG-SLPGRQTYILDKNGVVQLIYNNQFQPEKH---IDETLK 210 (215)
Q Consensus 142 ~~~~~~~~~~~--~~~~~d~~~~~~~~~g~~~~~-----~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~---~~~il~ 210 (215)
+++|+++++++ |+++.|++++++++||+.... .| ....|.+|||| +|+|++.+.+......+ ++++|+
T Consensus 93 ~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~~~~~vl~ 171 (173)
T 3mng_A 93 TGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCSLAPNIIS 171 (173)
T ss_dssp HHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSSTTSHHHHHH
T ss_pred HHHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcchHHHHHHHH
Confidence 99999999998 999999999999999998542 12 12335999999 99999999886544433 444544
Q ss_pred H
Q 028030 211 F 211 (215)
Q Consensus 211 ~ 211 (215)
.
T Consensus 172 ~ 172 (173)
T 3mng_A 172 Q 172 (173)
T ss_dssp H
T ss_pred h
Confidence 3
No 12
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.97 E-value=4.7e-31 Score=208.21 Aligned_cols=148 Identities=28% Similarity=0.510 Sum_probs=134.6
Q ss_pred ccCCCCCCCCCeE----EeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHH
Q 028030 66 AKVSKGQAPPSFT----LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSS 141 (215)
Q Consensus 66 ~~~~~g~~~P~f~----l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 141 (215)
..+++|+++|+|+ +.|.+|++++|+|++||++||+|||.+||+.|..++..|++++++|++.|++||+||.|+.+.
T Consensus 24 ~~~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~s 103 (219)
T 3tue_A 24 GNAKINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYA 103 (219)
T ss_dssp CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhh
Confidence 3468999999999 457789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 142 HKAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 142 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+++|.++. +++||++.|+++++.++||+..+..| ++.|.+||||++|+|++.+........+++++|+.|++
T Consensus 104 h~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g-~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~a 182 (219)
T 3tue_A 104 HLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQG-VAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEA 182 (219)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTT-EECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCC-eeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHH
Confidence 99999864 57899999999999999999865544 66789999999999999988777778899999998864
No 13
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.97 E-value=1.1e-30 Score=202.34 Aligned_cols=144 Identities=23% Similarity=0.372 Sum_probs=125.8
Q ss_pred CCCCCCCCeEEeCC-CC--CeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHH
Q 028030 69 SKGQAPPSFTLKDQ-EG--RNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAF 145 (215)
Q Consensus 69 ~~g~~~P~f~l~~~-~g--~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 145 (215)
++|+++|+|++++. +| +.+++++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+++.+++|
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~ 81 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAW 81 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH
Confidence 57999999999999 59 8999999999999999996699999999999999999999999999999999999999999
Q ss_pred HHHc----CCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 146 AKKY----RLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 146 ~~~~----~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
++++ +++|+++.|.++++.+.||+.....| ++.|++||||++|+|++.+.+........+++++.|+
T Consensus 82 ~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g-~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~ 152 (186)
T 1n8j_A 82 HSSSETIAKIKYAMIGDPTGALTRNFDNMREDEG-LADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIK 152 (186)
T ss_dssp HHHCTTGGGCCSEEEECTTSHHHHHTTCEETTTT-EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHcCcccCCceeEEECCchHHHHHhCCccCCCC-ceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 9999 89999999999999999999743222 2234999999999999999875443445666666654
No 14
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.97 E-value=8.5e-31 Score=199.08 Aligned_cols=145 Identities=21% Similarity=0.274 Sum_probs=128.5
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAF 145 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 145 (215)
..+++|+++|+|++.+.+|+.+++++++||++||+||+++||++|..+++.|++++++| +|++||+|+.|+++.+++|
T Consensus 15 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~ 92 (165)
T 1q98_A 15 HFPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARF 92 (165)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTC
T ss_pred ccCCCCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHH
Confidence 35789999999999999999999999999999999998999999999999999999999 6899999999999999999
Q ss_pred HHHcCC-CeEEEEcC-ChhHHHHhCCCccC---CCCCCccEEEEEcCCCcEEEEEeC-CCCCCccHHHHHHHHh
Q 028030 146 AKKYRL-PYTLLSDE-GNKVRKEWGVPADF---FGSLPGRQTYILDKNGVVQLIYNN-QFQPEKHIDETLKFLQ 213 (215)
Q Consensus 146 ~~~~~~-~~~~~~d~-~~~~~~~~g~~~~~---~g~~p~~~~~lid~~G~v~~~~~g-~~~~~~~~~~il~~l~ 213 (215)
++++++ +|+++.|. ++++.+.||+.... .| .+.|++||||++|+|++.+.| .......++++++.|+
T Consensus 93 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 93 CGAEGIENAKTVSTFRNHALHSQLGVDIQTGPLAG-LTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp TTTTTCTTEEEEECTTCTHHHHHTTCEECSSTTTT-SBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred HHHcCCCceEEeeccccchHHHHhCceecccccCC-ccceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 999999 79999998 89999999996421 22 334499999999999999986 4455678899998774
No 15
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.97 E-value=8.4e-31 Score=207.09 Aligned_cols=146 Identities=29% Similarity=0.476 Sum_probs=126.9
Q ss_pred ccCCCCCCCCCeEEeCC---CCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQ---EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSH 142 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~---~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 142 (215)
..+.+|+++|+|++++. +|+.+++++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+++.+
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 96 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTH 96 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred ccCCCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 45789999999999974 568999999999999999999999999999999999999999988999999999999999
Q ss_pred HHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 143 KAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 143 ~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
++|++++ +++|+++.|.++++.+.||+.....| .+| ++||||++|+|++.+.+........+++++.|+
T Consensus 97 ~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p--~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~ 173 (211)
T 2pn8_A 97 LAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLR--GLFIIDDKGILRQITLNDLPVGRSVDETLRLVQ 173 (211)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECE--EEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccc--eEEEECCCCEEEEEEecCCCCCCCHHHHHHHHH
Confidence 9999988 78999999999999999999632222 256 999999999999999876555456777777665
No 16
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.97 E-value=3.3e-30 Score=195.44 Aligned_cols=144 Identities=26% Similarity=0.376 Sum_probs=125.4
Q ss_pred cCCCCCCCCCeEEe--CCCC--CeeecCC-cCCCcEEEEEEcCCCChhhH-HHHHHHHHHHHHHHHcCcE-EEEEeCCCH
Q 028030 67 KVSKGQAPPSFTLK--DQEG--RNVSLSK-FKGKPVVVYFYPADETPGCT-KQACAFRDSYEKFKKAGAE-VIGISGDDS 139 (215)
Q Consensus 67 ~~~~g~~~P~f~l~--~~~g--~~~~l~~-~~gk~~ll~f~~a~~C~~C~-~~~~~l~~l~~~~~~~~v~-vv~vs~d~~ 139 (215)
.+++|+++|+|+++ +.+| +++++++ ++||++||+||+++||++|. .+++.|++++++|+++|++ ||+|+.|++
T Consensus 3 ~~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~ 82 (162)
T 1tp9_A 3 PIAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDP 82 (162)
T ss_dssp CCCTTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCH
T ss_pred cCCCCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCH
Confidence 46799999999986 8999 9999999 89999999999999999999 9999999999999999999 999999999
Q ss_pred HHHHHHHHHcCC--CeEEEEcCChhHHHHhCCCccC--CC--CCCccEEEEEcCCCcEEEEEeCCCCCC---ccHHHHHH
Q 028030 140 SSHKAFAKKYRL--PYTLLSDEGNKVRKEWGVPADF--FG--SLPGRQTYILDKNGVVQLIYNNQFQPE---KHIDETLK 210 (215)
Q Consensus 140 ~~~~~~~~~~~~--~~~~~~d~~~~~~~~~g~~~~~--~g--~~p~~~~~lid~~G~v~~~~~g~~~~~---~~~~~il~ 210 (215)
+.+++|++++++ +|+++.|+++++.++||+.... .| ..+.|++|||| +|+|++.+.+. ..+ ...+++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~-~~~~~~~~~~~vl~ 160 (162)
T 1tp9_A 83 FVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG-GGEFTVSSAEDILK 160 (162)
T ss_dssp HHHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS-SSCCSSCSHHHHHT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC-CCCCccCCHHHHHh
Confidence 999999999999 8999999999999999997421 12 11233999999 99999999886 332 35788876
Q ss_pred HH
Q 028030 211 FL 212 (215)
Q Consensus 211 ~l 212 (215)
.|
T Consensus 161 ~l 162 (162)
T 1tp9_A 161 DL 162 (162)
T ss_dssp TC
T ss_pred hC
Confidence 53
No 17
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.97 E-value=2.7e-30 Score=204.46 Aligned_cols=145 Identities=29% Similarity=0.454 Sum_probs=128.8
Q ss_pred ccCCCCCCCCCeEEeCC--CC--CeeecCCc-CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHH
Q 028030 66 AKVSKGQAPPSFTLKDQ--EG--RNVSLSKF-KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSS 140 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~--~g--~~~~l~~~-~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~ 140 (215)
..+.+|+++|+|++.+. +| +.++++++ +||++||+||+++||++|+.+++.|++++++|+++|++||+|+.|+++
T Consensus 19 ~~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~ 98 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKY 98 (213)
T ss_dssp -CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred ccccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 45679999999999998 89 89999999 999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHH
Q 028030 141 SHKAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 141 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l 212 (215)
.+++|++++ +++|+++.|.++++.+.||+.. ..| .+| .+||||++|+|++.+.+......+.+++++.|
T Consensus 99 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-~~g~~~p--~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l 175 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLF-DDSVSLR--AFVLIDMNGIVQHLLVNNLAIGRSVDEILRII 175 (213)
T ss_dssp HHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECE--EEEEECTTSBEEEEEEECTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCcc-ccCCccc--EEEEECCCCEEEEEEecCCCCCCCHHHHHHHH
Confidence 999999988 8899999999999999999983 112 155 99999999999999887655555677777766
Q ss_pred h
Q 028030 213 Q 213 (215)
Q Consensus 213 ~ 213 (215)
+
T Consensus 176 ~ 176 (213)
T 2i81_A 176 D 176 (213)
T ss_dssp H
T ss_pred H
Confidence 5
No 18
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.97 E-value=2.1e-30 Score=203.24 Aligned_cols=145 Identities=25% Similarity=0.317 Sum_probs=129.9
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAF 145 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 145 (215)
..+++|+++|+|+++|.+|+.++|++++||++||+||+++||++|..+++.|++++++| +|++||+|+.|+++.+++|
T Consensus 50 ~~l~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~ 127 (200)
T 3zrd_A 50 KLPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRF 127 (200)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTC
T ss_pred ccCCCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHH
Confidence 46889999999999999999999999999999999998899999999999999999999 5899999999999999999
Q ss_pred HHHcCC-CeEEEEcC-ChhHHHHhCCCccC---CCCCCccEEEEEcCCCcEEEEEeCC-CCCCccHHHHHHHHh
Q 028030 146 AKKYRL-PYTLLSDE-GNKVRKEWGVPADF---FGSLPGRQTYILDKNGVVQLIYNNQ-FQPEKHIDETLKFLQ 213 (215)
Q Consensus 146 ~~~~~~-~~~~~~d~-~~~~~~~~g~~~~~---~g~~p~~~~~lid~~G~v~~~~~g~-~~~~~~~~~il~~l~ 213 (215)
++++++ +|+++.|. ++++.+.||+.... .| ++.|++||||++|+|++.+.+. .....+++++++.|+
T Consensus 128 ~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g-~~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 128 CGAEGLSNVITLSTLRGADFKQAYGVAITEGPLAG-LTARAVVVLDGQDNVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp TTTTTCTTEEEEETTSCTHHHHHTTCEECSSTTTT-SBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred HHHcCCCCceEEecCchHHHHHHhCceeecccCCC-ccccEEEEECCCCeEEEEEecCCcccCCCHHHHHHhhC
Confidence 999999 99999999 99999999997432 23 2334999999999999998754 455678899998875
No 19
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.97 E-value=7.9e-30 Score=194.62 Aligned_cols=145 Identities=21% Similarity=0.328 Sum_probs=126.0
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAF 145 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 145 (215)
..+++|+++|+|++.|.+|+.+++++++||++||+||+++||++|..+++.|+++++++ ++++||+|+.|+++.+++|
T Consensus 19 ~~l~~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~ 96 (171)
T 2yzh_A 19 PELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRF 96 (171)
T ss_dssp CCCCTTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred CcCCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHH
Confidence 35689999999999999999999999999999999998899999999999999999999 6899999999999999999
Q ss_pred HHHcCC-CeEEEEc-CChhHHHHhCCCccC---CCCCCccEEEEEcCCCcEEEEEeCC-CCCCccHHHHHHHHhc
Q 028030 146 AKKYRL-PYTLLSD-EGNKVRKEWGVPADF---FGSLPGRQTYILDKNGVVQLIYNNQ-FQPEKHIDETLKFLQS 214 (215)
Q Consensus 146 ~~~~~~-~~~~~~d-~~~~~~~~~g~~~~~---~g~~p~~~~~lid~~G~v~~~~~g~-~~~~~~~~~il~~l~~ 214 (215)
++++++ +|+++.| +++++ +.||+.... .| ++.|++||||++|+|++.+.+. .......+++++.|++
T Consensus 97 ~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ 169 (171)
T 2yzh_A 97 CESFNIQNVTVASDFRYRDM-EKYGVLIGEGALKG-ILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKE 169 (171)
T ss_dssp HHHTTCCSSEEEECTTTCGG-GGGTCBBCSSTTTT-SBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHH
T ss_pred HHHcCCCCeEEeecCccCcH-HHhCCEecccccCC-ceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHh
Confidence 999999 8999999 78899 999997532 12 2234999999999999999763 2334556778777764
No 20
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.97 E-value=4.9e-30 Score=201.04 Aligned_cols=146 Identities=27% Similarity=0.502 Sum_probs=129.7
Q ss_pred ccCCCCCCCCCeEEeCC--CC--CeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHH
Q 028030 66 AKVSKGQAPPSFTLKDQ--EG--RNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSS 141 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~--~g--~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 141 (215)
..+.+|+++|+|++.+. +| +.+++++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+.+.
T Consensus 4 ~~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~ 83 (202)
T 1uul_A 4 GEAEDLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYS 83 (202)
T ss_dssp CCCCTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 35689999999999997 78 899999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 142 HKAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 142 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+++|++++ +++|+++.|.++++.+.||+.....| .+| ++||||++|+|++.+.|......+.+++++.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P--~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~ 161 (202)
T 1uul_A 84 HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYR--GLFIIDPKQNLRQITVNDLPVGRDVDEALRLVK 161 (202)
T ss_dssp HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECE--EEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceee--EEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHH
Confidence 99999988 88999999999999999999832222 266 999999999999998886655566777777665
No 21
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.97 E-value=7.4e-30 Score=197.47 Aligned_cols=144 Identities=25% Similarity=0.392 Sum_probs=125.3
Q ss_pred CCCCCCCCCeEEeCCCCC----eeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHH
Q 028030 68 VSKGQAPPSFTLKDQEGR----NVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHK 143 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~~g~----~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 143 (215)
+++|+++|+|++.+.+|+ .+++++++||++||+||+++||++|+.+++.|++++++|++++++||+|+.|+++.++
T Consensus 1 ~~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 80 (187)
T 1we0_A 1 SLIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHK 80 (187)
T ss_dssp CCTTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHH
Confidence 468999999999999999 9999999999999999999999999999999999999999989999999999999999
Q ss_pred HHHHHc----CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 144 AFAKKY----RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 144 ~~~~~~----~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+|++++ +++|+++.|.+.++.+.||+.....| .+| ++||||++|+|++.+.|....+...+++++.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P--~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~ 153 (187)
T 1we0_A 81 AWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADR--GTFIIDPDGVIQAIEINADGIGRDASTLINKVK 153 (187)
T ss_dssp HHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECE--EEEEECTTSBEEEEEEECTTSCCCTTHHHHHHH
T ss_pred HHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceee--EEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 999998 89999999999999999999832222 266 999999999999999886533333444444443
No 22
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.97 E-value=2.7e-30 Score=209.47 Aligned_cols=149 Identities=29% Similarity=0.473 Sum_probs=132.3
Q ss_pred cccCCCCCCCCCeEEeC---CCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHH
Q 028030 65 SAKVSKGQAPPSFTLKD---QEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSS 141 (215)
Q Consensus 65 ~~~~~~g~~~P~f~l~~---~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 141 (215)
...+.+|+++|+|++++ .+|++++|++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+.+.
T Consensus 59 ~~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~ 138 (254)
T 3tjj_A 59 LSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 138 (254)
T ss_dssp CCCCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 45678999999999774 568899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 142 HKAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 142 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+++|++++ +++|+++.|.++++.+.||+.....| +..|.+||||++|+|++.+.+......+++++++.|++
T Consensus 139 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g-~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 139 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSG-HTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTT-EECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCC-CccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 99999887 78999999999999999999753333 23349999999999999988876777788888888763
No 23
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.97 E-value=5.7e-30 Score=206.10 Aligned_cols=148 Identities=30% Similarity=0.477 Sum_probs=130.3
Q ss_pred ccCCCCCCCCCeEEeC---CCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHH
Q 028030 66 AKVSKGQAPPSFTLKD---QEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSH 142 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~---~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 142 (215)
..+.+|+++|+|++++ .+|++++|++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+.+.+
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~ 125 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTH 125 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHH
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 5678999999999875 4567999999999999999996699999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 143 KAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 143 ~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
++|++++ +++|+++.|.++++.+.||+.....| +..|.+||||++|+|++.+.+.......++++++.|++
T Consensus 126 ~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g-~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 126 LAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQG-HTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTT-EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCC-CccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 9999987 78999999999999999999854333 22349999999999999988866667778888888763
No 24
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.97 E-value=4.3e-30 Score=204.44 Aligned_cols=148 Identities=30% Similarity=0.502 Sum_probs=129.5
Q ss_pred cccCCCCCCCCCeEEeCC---CCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHH
Q 028030 65 SAKVSKGQAPPSFTLKDQ---EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSS 141 (215)
Q Consensus 65 ~~~~~~g~~~P~f~l~~~---~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 141 (215)
...+.+|+++|+|++.+. +|+++++++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+++.
T Consensus 37 ~~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 37 TMVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp ---CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 356899999999999955 55999999999999999999559999999999999999999998899999999999999
Q ss_pred HHHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 142 HKAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 142 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
.++|++.+ +++|+++.|.++++.+.||+.....| .+| ++||||++|+|++.+.+....+..++++++.|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P--~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~ 194 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFR--GLFIIDPNGILRQITINDKPVGRSVDETLRLLD 194 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCE--EEEEECTTSEEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccc--eEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 99999987 89999999999999999999843323 255 999999999999999887666667888888876
Q ss_pred c
Q 028030 214 S 214 (215)
Q Consensus 214 ~ 214 (215)
+
T Consensus 195 ~ 195 (222)
T 3ztl_A 195 A 195 (222)
T ss_dssp H
T ss_pred H
Confidence 3
No 25
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.97 E-value=6.7e-30 Score=199.48 Aligned_cols=146 Identities=32% Similarity=0.546 Sum_probs=129.9
Q ss_pred ccCCCCCCCCCeEEeCC-CC--CeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQ-EG--RNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSH 142 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~-~g--~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 142 (215)
..+.+|+++|+|++.+. +| +.+++++++||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+.+.+
T Consensus 3 ~~l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 82 (197)
T 1qmv_A 3 GNARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTH 82 (197)
T ss_dssp TTBCTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred CcccCCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 35689999999999997 88 9999999999999999999999999999999999999999988999999999999999
Q ss_pred HHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 143 KAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 143 ~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
++|++++ +++|+++.|.++++.+.||+.....| .+| ++||||++|+|++.+.|......+.+++++.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P--~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~ 159 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYR--GLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQ 159 (197)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECE--EEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceee--EEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHH
Confidence 9999987 88999999999999999999832222 266 999999999999999886655667777877765
No 26
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.97 E-value=1.2e-29 Score=197.64 Aligned_cols=144 Identities=26% Similarity=0.430 Sum_probs=128.5
Q ss_pred cCCCCCCCCCeEEeCCC-------------C--CeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEE
Q 028030 67 KVSKGQAPPSFTLKDQE-------------G--RNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEV 131 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~-------------g--~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 131 (215)
.+.+|+++|+|++.+.+ | +.+++++++||++||+||+++||++|+.+++.|++++++|++++++|
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred cCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 57899999999999988 7 89999999999999999999999999999999999999999889999
Q ss_pred EEEeCCCHHHHHHHHHHc----CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHH
Q 028030 132 IGISGDDSSSHKAFAKKY----RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHID 206 (215)
Q Consensus 132 v~vs~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~ 206 (215)
|+|+.|+++.+++|++++ +++|+++.|.+.++.+.|++... .| .+| ++||||++|+|++.+.|....+...+
T Consensus 83 v~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-~g~~~P--~~~lid~~G~i~~~~~g~~~~~~~~~ 159 (195)
T 2bmx_A 83 LGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNA-DGVADR--VTFIVDPNNEIQFVSATAGSVGRNVD 159 (195)
T ss_dssp EEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCT-TSSBCE--EEEEECTTSBEEEEEEECTTCCCCHH
T ss_pred EEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCccc-CCCccc--eEEEEcCCCeEEEEEecCCCCCCCHH
Confidence 999999999999999998 89999999999999999999832 12 267 99999999999999988654445667
Q ss_pred HHHHHHh
Q 028030 207 ETLKFLQ 213 (215)
Q Consensus 207 ~il~~l~ 213 (215)
++++.|+
T Consensus 160 ~l~~~l~ 166 (195)
T 2bmx_A 160 EVLRVLD 166 (195)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777665
No 27
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.97 E-value=7.5e-30 Score=198.32 Aligned_cols=142 Identities=30% Similarity=0.462 Sum_probs=127.3
Q ss_pred CCCCCCCCeEEeCC--CC--CeeecCCc-CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHH
Q 028030 69 SKGQAPPSFTLKDQ--EG--RNVSLSKF-KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHK 143 (215)
Q Consensus 69 ~~g~~~P~f~l~~~--~g--~~~~l~~~-~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 143 (215)
++|+++|+|++.+. +| +.++++++ +||++||+||+++||++|..+++.|++++++|+++|++||+|+.|+++.++
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 47999999999998 99 99999999 999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 144 AFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 144 ~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+|++++ +++|+++.|.++++.+.||+.. ..| .+| ++||||++|+|++.+.|....+.+.+++++.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-~~g~~~P--~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~ 155 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLF-NESVALR--AFVLIDKQGVVQHLLVNNLALGRSVDEILRLID 155 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECC--EEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHH
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcC-cCCceee--EEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHH
Confidence 999988 7899999999999999999983 112 267 999999999999999886555566777777665
No 28
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.97 E-value=1.4e-29 Score=193.16 Aligned_cols=143 Identities=20% Similarity=0.301 Sum_probs=125.0
Q ss_pred cCCCCCCCCCeEEe-CCCCCeeecCCc-CCCcEEEEEEcCCCChhhHH-HHHHHHHHHHHHHHcCc-EEEEEeCCCHHHH
Q 028030 67 KVSKGQAPPSFTLK-DQEGRNVSLSKF-KGKPVVVYFYPADETPGCTK-QACAFRDSYEKFKKAGA-EVIGISGDDSSSH 142 (215)
Q Consensus 67 ~~~~g~~~P~f~l~-~~~g~~~~l~~~-~gk~~ll~f~~a~~C~~C~~-~~~~l~~l~~~~~~~~v-~vv~vs~d~~~~~ 142 (215)
.+++|+++|+|+++ +.+|+.++|+++ +||++||+||+++||++|.. ++|.|++++++|+++|+ +||+|+.|+++.+
T Consensus 2 ~l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~ 81 (167)
T 2wfc_A 2 PIKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVM 81 (167)
T ss_dssp CCCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHH
T ss_pred CCCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHH
Confidence 36789999999999 999999999998 99999999988999999999 99999999999999999 9999999999999
Q ss_pred HHHHHHcCCC--eEEEEcCChhHHHHhCCCccC---CC---CCCccEEEEEcCCCcEEEEEeCCCCC---CccHHHHHHH
Q 028030 143 KAFAKKYRLP--YTLLSDEGNKVRKEWGVPADF---FG---SLPGRQTYILDKNGVVQLIYNNQFQP---EKHIDETLKF 211 (215)
Q Consensus 143 ~~~~~~~~~~--~~~~~d~~~~~~~~~g~~~~~---~g---~~p~~~~~lid~~G~v~~~~~g~~~~---~~~~~~il~~ 211 (215)
++|+++++++ |+++.|+++++.+.||+.... +| ..| .+||| ++|+|++.+.+.... -...+.+++.
T Consensus 82 ~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p--~t~lI-~~G~I~~~~~~~~~~~~~~~~~~~~~~~ 158 (167)
T 2wfc_A 82 DAWGKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKR--YSLVI-EDGVVTKVNVEPDGKGLTCSLAPNILSQ 158 (167)
T ss_dssp HHHHHHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECC--EEEEE-ETTEEEEEEECTTSSSSSTTSHHHHHHH
T ss_pred HHHHHhcCCCcceEEEECCCCcHHHHcCCccccccccCcccceE--EEEEE-eCCEEEEEEecCCCCcceeccHHHHHHH
Confidence 9999999999 999999999999999997521 11 135 99999 999999998875322 2455666665
Q ss_pred H
Q 028030 212 L 212 (215)
Q Consensus 212 l 212 (215)
|
T Consensus 159 ~ 159 (167)
T 2wfc_A 159 L 159 (167)
T ss_dssp H
T ss_pred h
Confidence 5
No 29
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.97 E-value=1.7e-29 Score=200.72 Aligned_cols=146 Identities=31% Similarity=0.504 Sum_probs=128.1
Q ss_pred ccCCCCCCCCCeEEeC---CCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHH
Q 028030 66 AKVSKGQAPPSFTLKD---QEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSH 142 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~---~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~ 142 (215)
..+.+|+++|+|++++ .+|+.+++++++||++||+||+++||++|+.+++.|++++++|+++|++||+|+.|+.+.+
T Consensus 25 ~~l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 25 PAPAVTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp --CCTTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred CcccCCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 3578999999999984 5789999999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHc-------CCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 143 KAFAKKY-------RLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 143 ~~~~~~~-------~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
++|++++ +++|+++.|.+.++.+.||+.....| .+| ++||||++|+|++.+.|......+.+++++.|+
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P--~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~ 181 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALR--GLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVK 181 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECE--EEEEECTTSBEEEEEEECTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccc--eEEEECCCCEEEEEEecCCCCCCCHHHHHHHHH
Confidence 9999987 78999999999999999999832222 266 999999999999998887665566777777665
No 30
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.3e-29 Score=196.27 Aligned_cols=146 Identities=22% Similarity=0.329 Sum_probs=125.7
Q ss_pred ccCCCCCCCCCeEEeCC--CC-CeeecCC-cCCCcEEEEEEcCCCChhhHH-HHHHHHHHHHHHHHcCcE-EEEEeCCCH
Q 028030 66 AKVSKGQAPPSFTLKDQ--EG-RNVSLSK-FKGKPVVVYFYPADETPGCTK-QACAFRDSYEKFKKAGAE-VIGISGDDS 139 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~--~g-~~~~l~~-~~gk~~ll~f~~a~~C~~C~~-~~~~l~~l~~~~~~~~v~-vv~vs~d~~ 139 (215)
..+++|+++|+|++++. +| ++++|++ ++||++||+||+++||++|+. +++.|++++++|+++|++ |++|+.|++
T Consensus 24 ~~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 103 (184)
T 3uma_A 24 MTIAVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDL 103 (184)
T ss_dssp SCCCTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCH
T ss_pred CcCCCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCH
Confidence 34789999999999998 99 9999999 799988888777999999999 899999999999999999 999999999
Q ss_pred HHHHHHHHHcCCC--eEEEEcCChhHHHHhCCCccC--CC--CCCccEEEEEcCCCcEEEEEeCCCCC---CccHHHHHH
Q 028030 140 SSHKAFAKKYRLP--YTLLSDEGNKVRKEWGVPADF--FG--SLPGRQTYILDKNGVVQLIYNNQFQP---EKHIDETLK 210 (215)
Q Consensus 140 ~~~~~~~~~~~~~--~~~~~d~~~~~~~~~g~~~~~--~g--~~p~~~~~lid~~G~v~~~~~g~~~~---~~~~~~il~ 210 (215)
+.+++|+++++++ |+++.|+++++.++||+.... .| ....|.+|||| +|+|++.+.+.... ...++++|+
T Consensus 104 ~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~~~~~~~vL~ 182 (184)
T 3uma_A 104 HVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEESPGQATASGAAAMLE 182 (184)
T ss_dssp HHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECSSTTCCSTTSHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeCCCCCCcCCCHHHHHh
Confidence 9999999999999 999999999999999997531 12 11234899997 99999999875322 266777877
Q ss_pred HH
Q 028030 211 FL 212 (215)
Q Consensus 211 ~l 212 (215)
.|
T Consensus 183 ~L 184 (184)
T 3uma_A 183 LL 184 (184)
T ss_dssp HC
T ss_pred hC
Confidence 54
No 31
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.96 E-value=1.1e-29 Score=203.41 Aligned_cols=146 Identities=23% Similarity=0.392 Sum_probs=127.7
Q ss_pred CCCCCCCCCeEEeCCCCCeeecCCcCCC-cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHH
Q 028030 68 VSKGQAPPSFTLKDQEGRNVSLSKFKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFA 146 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~~g~~~~l~~~~gk-~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~ 146 (215)
+.+|+++|+|++.+.+| .+++++++|| ++||+||+++||++|..+++.|++++++|+++|++||+||.|+.+.+++|+
T Consensus 3 l~iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~ 81 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWS 81 (233)
T ss_dssp CCTTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHH
T ss_pred CCCCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Confidence 67899999999999999 8999999998 999999999999999999999999999999999999999999999999999
Q ss_pred H------Hc--CCCeEEEEcCChhHHHHhCCCccC----CC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 147 K------KY--RLPYTLLSDEGNKVRKEWGVPADF----FG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 147 ~------~~--~~~~~~~~d~~~~~~~~~g~~~~~----~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+ ++ +++|+++.|.++++++.||+.... .| ....|.+||||++|+|++.+.+......+.+++++.|+
T Consensus 82 ~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~ 161 (233)
T 2v2g_A 82 EDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVID 161 (233)
T ss_dssp HHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHH
Confidence 8 56 889999999999999999996321 11 12234999999999999998876555667888888776
Q ss_pred c
Q 028030 214 S 214 (215)
Q Consensus 214 ~ 214 (215)
+
T Consensus 162 ~ 162 (233)
T 2v2g_A 162 S 162 (233)
T ss_dssp H
T ss_pred H
Confidence 3
No 32
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.96 E-value=1.1e-29 Score=191.44 Aligned_cols=144 Identities=30% Similarity=0.509 Sum_probs=123.4
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCC--cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGK--PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHK 143 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk--~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 143 (215)
..+++|+++|+|++.|.+|+++++++++|| ++||+||+++||++|..+++.|++++++|+++| +||+|+.|+++.++
T Consensus 5 ~~~~~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~ 83 (159)
T 2a4v_A 5 NELEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQK 83 (159)
T ss_dssp TCCCTTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHH
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHH
Confidence 457899999999999999999999999886 899999889999999999999999999999889 99999999999999
Q ss_pred HHHHHcCCCeEEEEcCChhHHHHhCCCccC-CCCCCccEEEEEcCCCcEEEEEeCCCCC---CccHHHHHHHHh
Q 028030 144 AFAKKYRLPYTLLSDEGNKVRKEWGVPADF-FGSLPGRQTYILDKNGVVQLIYNNQFQP---EKHIDETLKFLQ 213 (215)
Q Consensus 144 ~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~-~g~~p~~~~~lid~~G~v~~~~~g~~~~---~~~~~~il~~l~ 213 (215)
+|+++++++|+++.|.++++.+.||+.... .|..| .+||| ++|+|++.+.|.... +..+++++++++
T Consensus 84 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~g~~~--~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~~l~ 154 (159)
T 2a4v_A 84 KFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSGSIR--SHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLEVAE 154 (159)
T ss_dssp HHHHHHTCSSEEEECTTCHHHHHHTCBSSSSSCBCC--EEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEECCccHHHHHhCCcccccCCccc--eEEEE-cCCEEEEEEccCCccccHHHHHHHHHHHHH
Confidence 999999999999999999999999998632 22234 89999 999999999874321 234444544443
No 33
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.96 E-value=1.5e-29 Score=197.51 Aligned_cols=143 Identities=23% Similarity=0.410 Sum_probs=127.1
Q ss_pred CCCCCCCCCeEEeCC--CCC---eeecCCc-CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHH
Q 028030 68 VSKGQAPPSFTLKDQ--EGR---NVSLSKF-KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSS 141 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~--~g~---~~~l~~~-~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 141 (215)
+++|+++|+|++.+. +|+ .++++++ +||++||+||+++||++|+.+++.|++++++|+++|++||+|+.|+++.
T Consensus 1 ~~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 80 (198)
T 1zof_A 1 MVVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQV 80 (198)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHH
Confidence 468999999999998 998 9999999 9999999999999999999999999999999999899999999999999
Q ss_pred HHHHHHH-------cCCCeEEEEcCChhHHHHhCCCccCCC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 142 HKAFAKK-------YRLPYTLLSDEGNKVRKEWGVPADFFG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 142 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~g~~~~~~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+++|+++ ++++|+++.|.++++.+.||+.... | .+| ++||||++|+|++.+.|....+...+++++.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~-g~~~P--~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~ 157 (198)
T 1zof_A 81 HFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEE-AIALR--GAFLIDKNMKVRHAVINDLPLGRNADEMLRMVD 157 (198)
T ss_dssp HHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETT-TEECE--EEEEEETTTEEEEEEEESSSCCCHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccC-Ccccc--eEEEECCCCEEEEEEecCCCCCCCHHHHHHHHH
Confidence 9999998 8899999999999999999998211 1 267 999999999999999886554555666666654
No 34
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.96 E-value=1.1e-28 Score=196.53 Aligned_cols=146 Identities=21% Similarity=0.365 Sum_probs=125.6
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCcCCC-cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHH
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKFKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAF 145 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~~gk-~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 145 (215)
.+.+|+++|+|++.+.+| .+++++++|| ++||+||+++||++|..+++.|++++++|+++|++||+||.|+.+.+++|
T Consensus 4 ~l~~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~ 82 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAW 82 (224)
T ss_dssp -CCTTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHH
T ss_pred cCCCcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 467999999999999999 9999999997 76776655999999999999999999999999999999999999999999
Q ss_pred HHH----------cCCCeEEEEcCChhHHHHhCCCccC----CC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHH
Q 028030 146 AKK----------YRLPYTLLSDEGNKVRKEWGVPADF----FG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLK 210 (215)
Q Consensus 146 ~~~----------~~~~~~~~~d~~~~~~~~~g~~~~~----~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~ 210 (215)
+++ ++++|+++.|.++++++.||+.... .| ....|++||||++|+|++.+.+......+.+++++
T Consensus 83 ~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~ 162 (224)
T 1prx_A 83 SKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILR 162 (224)
T ss_dssp HHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHH
T ss_pred HHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHH
Confidence 987 7899999999999999999996421 11 12234999999999999999876555567888888
Q ss_pred HHh
Q 028030 211 FLQ 213 (215)
Q Consensus 211 ~l~ 213 (215)
.|+
T Consensus 163 ~i~ 165 (224)
T 1prx_A 163 VVI 165 (224)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 35
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.96 E-value=2.2e-28 Score=180.72 Aligned_cols=123 Identities=19% Similarity=0.242 Sum_probs=114.3
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHH---HHHHHHHcCcEEEEEeCCCH-HHH
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRD---SYEKFKKAGAEVIGISGDDS-SSH 142 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~---l~~~~~~~~v~vv~vs~d~~-~~~ 142 (215)
...+|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.++|.|.+ +++++++.+++||+|+.|+. +.+
T Consensus 4 ~~~~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~ 82 (142)
T 3eur_A 4 KNRLGTKALNFTYTLDSGVKGTLYQFPAEYTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEW 82 (142)
T ss_dssp TTCTTSBCCCCEEEETTSCEEETTTCCCSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHH
T ss_pred hhcCCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHH
Confidence 467999999999999999999999999999999999 9999999999999999 99999988999999999765 789
Q ss_pred HHHHHHcCCCeEEEEcCChh--HHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 143 KAFAKKYRLPYTLLSDEGNK--VRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 143 ~~~~~~~~~~~~~~~d~~~~--~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++++++++++|+.+.|.++. +.+.|++.. +| ++||||++|+|++...+
T Consensus 83 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~~ 132 (142)
T 3eur_A 83 KKHRNDFAKEWTNGYDKELVIKNKNLYDLRA-----IP--TLYLLDKNKTVLLKDAT 132 (142)
T ss_dssp HHHGGGSCTTSEEEECTTCHHHHTTCSCCTT-----CS--EEEEECTTCBEEEEEEC
T ss_pred HHHHHhcccccccccCccchhhhhhhcCCCc-----CC--eEEEECCCCcEEecCCC
Confidence 99999999999999998765 788899987 88 99999999999998765
No 36
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=1.4e-28 Score=183.43 Aligned_cols=123 Identities=24% Similarity=0.406 Sum_probs=115.6
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecC--CcCCCcEEEEEEcCCCChh--hHHHHHHHHHHHHHH-HHcCcEEEEEeCCCH-
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLS--KFKGKPVVVYFYPADETPG--CTKQACAFRDSYEKF-KKAGAEVIGISGDDS- 139 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~--~~~gk~~ll~f~~a~~C~~--C~~~~~~l~~l~~~~-~~~~v~vv~vs~d~~- 139 (215)
..+++|+++|+|++.+.+|+.++++ +++||++||+|| ++||++ |+.+++.|++++++| +++|++||+|+.|+.
T Consensus 3 ~~l~~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~-a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 81 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFW-ASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDK 81 (150)
T ss_dssp CTTSTTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEE-CTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCH
T ss_pred ccccCCCcCCccEeECCCCCEEecchhhhCCCEEEEEEE-eCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCH
Confidence 4678999999999999999999999 999999999999 999999 999999999999999 777899999999854
Q ss_pred HHHHHHHHHcCCCeEEEEcC---ChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEe
Q 028030 140 SSHKAFAKKYRLPYTLLSDE---GNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~d~---~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
+.+++|+++++++|+++.|. +..+.+.||+.. +| ++||||++|+|++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 82 QQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYK-----IP--ANILLSSDGKILAKNL 134 (150)
T ss_dssp HHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCS-----SS--EEEEECTTSBEEEESC
T ss_pred HHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCc-----cC--eEEEECCCCEEEEccC
Confidence 89999999999999999998 679999999987 88 9999999999999885
No 37
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.96 E-value=3.4e-28 Score=179.33 Aligned_cols=117 Identities=21% Similarity=0.352 Sum_probs=110.9
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHH---HHHHHHHcCcEEEEEeCC-CHHHHHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRD---SYEKFKKAGAEVIGISGD-DSSSHKA 144 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~---l~~~~~~~~v~vv~vs~d-~~~~~~~ 144 (215)
++|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.++|.|.+ +++++++++++|++|+.| +.+.+++
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWAT 80 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGCCCSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHH
Confidence 5899999999999999999999999999999999 9999999999999998 999999889999999998 6788999
Q ss_pred HHHHcCCCeEEEEcCChhHHH--HhCCCccCCCCCCccEEEEEcCCCcEEE
Q 028030 145 FAKKYRLPYTLLSDEGNKVRK--EWGVPADFFGSLPGRQTYILDKNGVVQL 193 (215)
Q Consensus 145 ~~~~~~~~~~~~~d~~~~~~~--~~g~~~~~~g~~p~~~~~lid~~G~v~~ 193 (215)
|+++++++|+++.|.++.+.. .|++.. +| ++++||++|+|++
T Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~ 124 (142)
T 3ewl_A 81 KAVYMPQGWIVGWNKAGDIRTRQLYDIRA-----TP--TIYLLDGRKRVIL 124 (142)
T ss_dssp HHTTSCTTCEEEECTTCHHHHTTCSCCCS-----SS--EEEEECTTCBEEE
T ss_pred HHHHcCCCcceeeCCccchhhHHHcCCCC-----CC--eEEEECCCCCEEe
Confidence 999999999999999998877 899987 88 9999999999987
No 38
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.96 E-value=2.3e-28 Score=193.73 Aligned_cols=143 Identities=24% Similarity=0.260 Sum_probs=124.0
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhH-----HHHHHHHHHHHHHHHcCcEEEEEeCCCHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCT-----KQACAFRDSYEKFKKAGAEVIGISGDDSS 140 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~-----~~~~~l~~l~~~~~~~~v~vv~vs~d~~~ 140 (215)
..+++|+++|+|++.+.+|+.++|++++||++||+||++.||++|. .+++.|+++ | +|++||+||.|+++
T Consensus 20 ~~l~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~ 94 (224)
T 3keb_A 20 DFPRKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPS 94 (224)
T ss_dssp CCCCTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHH
T ss_pred CcCCCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHH
Confidence 4578999999999999999999999999999999999777799999 999998887 4 58999999999999
Q ss_pred HHHHHHHHcCC-CeEEEEcC-ChhHHHHhCCCccC---CCCCCccEEEEEcCCCcEEEEEeCC-CCCCccHHHHHHHHhc
Q 028030 141 SHKAFAKKYRL-PYTLLSDE-GNKVRKEWGVPADF---FGSLPGRQTYILDKNGVVQLIYNNQ-FQPEKHIDETLKFLQS 214 (215)
Q Consensus 141 ~~~~~~~~~~~-~~~~~~d~-~~~~~~~~g~~~~~---~g~~p~~~~~lid~~G~v~~~~~g~-~~~~~~~~~il~~l~~ 214 (215)
.+++|++++++ +|+++.|. ++++.+.||+.... .| ++.|.+||||++|+|++.+... .....+.+++++.|++
T Consensus 95 ~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G-~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~ 173 (224)
T 3keb_A 95 SLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSG-YTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQE 173 (224)
T ss_dssp HHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTT-CBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccccccC-CccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 99999999999 69999998 69999999998632 23 4456999999999999998753 3344677888887753
No 39
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.96 E-value=8.7e-28 Score=178.94 Aligned_cols=125 Identities=23% Similarity=0.373 Sum_probs=118.1
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC-CHHHHHHH
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-DSSSHKAF 145 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-~~~~~~~~ 145 (215)
.+++|+++|+|++.+ +|+.+++++++||++||+|| ++||++|+.+++.|.+++++++++|+++++|+.| +.+.+++|
T Consensus 2 ~l~~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (152)
T 3gl3_A 2 SLDKGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKF 79 (152)
T ss_dssp CCCTTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHH
T ss_pred CCCCCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHH
Confidence 367999999999999 99999999999999999999 9999999999999999999999989999999998 66899999
Q ss_pred HHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 146 AKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 146 ~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+++++++|+++.|.+.++.+.|++.. +| +++|||++|+|++.+.|...
T Consensus 80 ~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~ 127 (152)
T 3gl3_A 80 LAQVPAEFTVAFDPKGQTPRLYGVKG-----MP--TSFLIDRNGKVLLQHVGFRP 127 (152)
T ss_dssp HHHSCCCSEEEECTTCHHHHHTTCCS-----SS--EEEEECTTSBEEEEEESCCT
T ss_pred HHHcCCCCceeECCcchhHHHcCCCC-----CC--eEEEECCCCCEEEEEccCCC
Confidence 99999999999999999999999987 88 99999999999999998543
No 40
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.96 E-value=1.3e-28 Score=188.82 Aligned_cols=144 Identities=22% Similarity=0.320 Sum_probs=121.2
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCC-ChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADE-TPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKA 144 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~-C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 144 (215)
..+.+|+++|+|++.+.+|+.+++++++||++||+|| ++| |++|+.+++.|++++++ .+++||+|+.|+++.+++
T Consensus 16 ~~l~~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~-~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~ 91 (175)
T 1xvq_A 16 ELPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIF-PSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKR 91 (175)
T ss_dssp CCCCTTSBCCCCEEECTTSCEEEGGGGTTSCEEEEEC-SCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTT
T ss_pred CCCCcCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEE-eCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHH
Confidence 4568999999999999999999999999999999999 666 99999999999999988 579999999999999999
Q ss_pred HHHHcCC-CeEEEEcCChhHHHHhCCCccC---CCCCCccEEEEEcCCCcEEEEEeC-CCCCCccHHHHHHHHhc
Q 028030 145 FAKKYRL-PYTLLSDEGNKVRKEWGVPADF---FGSLPGRQTYILDKNGVVQLIYNN-QFQPEKHIDETLKFLQS 214 (215)
Q Consensus 145 ~~~~~~~-~~~~~~d~~~~~~~~~g~~~~~---~g~~p~~~~~lid~~G~v~~~~~g-~~~~~~~~~~il~~l~~ 214 (215)
|++++++ +|+++.|.+.++.+.||+.... .| .+.|.+||||++|+|++.+.| .......++++++.+++
T Consensus 92 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g-~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~ 165 (175)
T 1xvq_A 92 FCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAG-LLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGA 165 (175)
T ss_dssp CC------CEEEEECTTSSHHHHTTCBBCSSTTTT-SBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred HHHHcCCCCceEeeCCHHHHHHHhCCcccccccCC-cccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHh
Confidence 9999999 8999999999999999997521 12 233499999999999999975 44456678888888764
No 41
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.96 E-value=6e-29 Score=186.55 Aligned_cols=136 Identities=18% Similarity=0.311 Sum_probs=119.6
Q ss_pred CCCCCCCeEEeCC--CCCeeecCCcCCCcEEEEEEcCCCChhhHHH-HHHHHHHHHHHHHcCcEEEEEeC-------CCH
Q 028030 70 KGQAPPSFTLKDQ--EGRNVSLSKFKGKPVVVYFYPADETPGCTKQ-ACAFRDSYEKFKKAGAEVIGISG-------DDS 139 (215)
Q Consensus 70 ~g~~~P~f~l~~~--~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~-~~~l~~l~~~~~~~~v~vv~vs~-------d~~ 139 (215)
.|+++|+|++.+. +|+.+++++++||++||+|| ++||++|+.+ ++.|++++++|+++++.||+|+. ++.
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~ 80 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTP 80 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCH
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCH
Confidence 6889999999994 88999999999999999999 9999999996 99999999999988999999996 478
Q ss_pred HHHHHHHHHcCCCeEEEEcCCh-----hHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 140 SSHKAFAKKYRLPYTLLSDEGN-----KVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+.+++|+++++++|+++.|.++ .+.+.||+.. +| ++||||++|+|++.+.|..+.+...+.+.++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 81 ISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRG-----TP--SLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp HHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCS-----SS--EEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCC-----CC--EEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999887 6999999987 88 999999999999999987554433333334443
No 42
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.96 E-value=4.8e-29 Score=184.51 Aligned_cols=140 Identities=19% Similarity=0.299 Sum_probs=124.5
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC-CHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-DSSSHKA 144 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-~~~~~~~ 144 (215)
..+.+|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|.+++++++++|+.|++|+.| +.+.+++
T Consensus 3 ~~~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 81 (148)
T 3hcz_A 3 APLLLGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFW-DSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLK 81 (148)
T ss_dssp CCCCTTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHH
T ss_pred CccCCCCcCCceEEecCCCCEEEhHHcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHH
Confidence 4578999999999999999999999999999999999 9999999999999999999999889999999998 5689999
Q ss_pred HHHHcCCC-eEEEEcCChh--HHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 145 FAKKYRLP-YTLLSDEGNK--VRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 145 ~~~~~~~~-~~~~~d~~~~--~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
|+++++++ |+++.|.++. +.+.|++.. +| ++++||++|+|+..+.|....+..++++.+.++
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~-----~P--~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l~ 146 (148)
T 3hcz_A 82 FIRSKKIGGWLNVRDSKNHTDFKITYDIYA-----TP--VLYVLDKNKVIIAKRIGYENLDDFLVQYEKSLK 146 (148)
T ss_dssp HHHHHTCTTSEEEECTTCCCCHHHHHCCCS-----SC--EEEEECTTCBEEEESCCGGGHHHHHHHHHHHHH
T ss_pred HHHHcCCCCceEEeccccchhHHHhcCcCC-----CC--EEEEECCCCcEEEecCCHHHHHHHHHHHHHHhc
Confidence 99999999 9999999888 999999987 88 999999999999998875333344444444443
No 43
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.96 E-value=7.8e-29 Score=188.10 Aligned_cols=144 Identities=22% Similarity=0.292 Sum_probs=123.9
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCC-ChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADE-TPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKA 144 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~-C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 144 (215)
..+++|+++|+|++.+.+|+.+++++++||++||+|| ++| |++|+.+++.|++++++| .++++|+|+.|+++.+++
T Consensus 16 ~~~~~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~-~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~ 92 (167)
T 2jsy_A 16 QEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVI-PSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQAR 92 (167)
T ss_dssp CCCCTTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEEC-SCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSC
T ss_pred CccCCCCcCCceEEECCCCCEeeHHHhCCCeEEEEEe-cCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHH
Confidence 3578999999999999999999999999999999999 777 999999999999999999 689999999999999999
Q ss_pred HHHHcCC-CeEEEEc-CChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC-CCCccHHHHHHHHh
Q 028030 145 FAKKYRL-PYTLLSD-EGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF-QPEKHIDETLKFLQ 213 (215)
Q Consensus 145 ~~~~~~~-~~~~~~d-~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~-~~~~~~~~il~~l~ 213 (215)
|++++++ +|+++.| .++++.+.||+.....| ++.|++||||++|+|++.+.|.. ......+++++.|+
T Consensus 93 ~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g-~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~ 163 (167)
T 2jsy_A 93 WCGANGIDKVETLSDHRDMSFGEAFGVYIKELR-LLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAK 163 (167)
T ss_dssp CGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTC-SBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHH
T ss_pred HHHhcCCCCceEeeCCchhHHHHHhCCccccCC-ceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHH
Confidence 9999999 8999999 88999999999863333 22349999999999999997642 23344566666554
No 44
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.96 E-value=9e-29 Score=185.84 Aligned_cols=136 Identities=15% Similarity=0.247 Sum_probs=121.4
Q ss_pred CCCCCCCeEEeC-CCCCeeecCCcCCCcEEEEEEcCCCChhhHHH-HHHHHHHHHHHHHcCcEEEEEeC-------CCHH
Q 028030 70 KGQAPPSFTLKD-QEGRNVSLSKFKGKPVVVYFYPADETPGCTKQ-ACAFRDSYEKFKKAGAEVIGISG-------DDSS 140 (215)
Q Consensus 70 ~g~~~P~f~l~~-~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~-~~~l~~l~~~~~~~~v~vv~vs~-------d~~~ 140 (215)
.|.++|+|++.+ .+|+.+++++++||++||+|| ++||++|..+ ++.|++++++|+++|++||+|+. |+.+
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~-a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~ 83 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVF-QMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPE 83 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHH
T ss_pred CCCcCCCcccccccCCCccCHHHhCCCEEEEEEE-cCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHH
Confidence 588999999999 899999999999999999999 9999999995 99999999999988999999997 6889
Q ss_pred HHHHHHHHcCCCeEEEEcCChh------HHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 141 SHKAFAKKYRLPYTLLSDEGNK------VRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 141 ~~~~~~~~~~~~~~~~~d~~~~------~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
.+++|+++++++|+++.|.... +.+.||+.. +| ++||||++|+|++.+.|..+.+...+.+.++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 84 ALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEG-----TP--SIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp HHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCS-----SS--EEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCc-----cc--eEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 9999999999999999999888 999999987 88 999999999999999997654443344444443
No 45
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.96 E-value=4.5e-29 Score=184.68 Aligned_cols=123 Identities=15% Similarity=0.224 Sum_probs=108.9
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC-CHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-DSSSHKA 144 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-~~~~~~~ 144 (215)
..+++|+++|+|++ +.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|++++++||+|+.| +.+.+++
T Consensus 5 ~~l~~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~ 82 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFW-AAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTE 82 (143)
T ss_dssp BSSSTTSBCCCCCC------CCCSCCSSCCEEEEEEE-CTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHH
T ss_pred cccCCcccCCceEE-cCCCCEEEHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHH
Confidence 56789999999999 9999999999999999999999 9999999999999999999999889999999998 5689999
Q ss_pred HHHHcCCCe-EEEEcCC---hhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 145 FAKKYRLPY-TLLSDEG---NKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 145 ~~~~~~~~~-~~~~d~~---~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++++++++| +++.|.. .++.+.||+.. +| ++||||++|+|+++..+
T Consensus 83 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~~ 132 (143)
T 4fo5_A 83 TVKIDKLDLSTQFHEGLGKESELYKKYDLRK-----GF--KNFLINDEGVIIAANVT 132 (143)
T ss_dssp HHHHHTCCGGGEEECTTGGGSHHHHHTTGGG-----CC--CEEEECTTSBEEEESCC
T ss_pred HHHHhCCCCceeeecccccchHHHHHcCCCC-----CC--cEEEECCCCEEEEccCC
Confidence 999999999 7888874 57899999987 88 99999999999988654
No 46
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.96 E-value=1.8e-28 Score=183.16 Aligned_cols=122 Identities=24% Similarity=0.377 Sum_probs=114.8
Q ss_pred CCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC-CHHHHHHHH
Q 028030 68 VSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-DSSSHKAFA 146 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-~~~~~~~~~ 146 (215)
+++|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|++++++|++|+.| +.+.+++|+
T Consensus 3 l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (152)
T 2lrn_A 3 LATGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFW-FAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAI 81 (152)
T ss_dssp SCTTEECCCCEEECSSSCEEESGGGTTSEEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHH
T ss_pred ccCCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHH
Confidence 67899999999999999999999999999999999 9999999999999999999999889999999998 468899999
Q ss_pred HHcCCCeEEEEcC---ChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 147 KKYRLPYTLLSDE---GNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 147 ~~~~~~~~~~~d~---~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++++++|+++.|. +.++.+.||+.. +| +++|||++|+|++.+.+
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~~ 128 (152)
T 2lrn_A 82 EEDKSYWNQVLLQKDDVKDVLESYCIVG-----FP--HIILVDPEGKIVAKELR 128 (152)
T ss_dssp HHHTCCSEEEEECHHHHHHHHHHTTCCS-----SC--EEEEECTTSEEEEECCC
T ss_pred HHhCCCCeEEecccchhHHHHHHhCCCc-----CC--eEEEECCCCeEEEeeCC
Confidence 9999999999998 789999999987 88 99999999999998743
No 47
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.96 E-value=6.9e-28 Score=185.47 Aligned_cols=142 Identities=20% Similarity=0.308 Sum_probs=121.7
Q ss_pred cCCCCCCCCCeEEeCC--CCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCc------EEEEEeCCC
Q 028030 67 KVSKGQAPPSFTLKDQ--EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGA------EVIGISGDD 138 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~--~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v------~vv~vs~d~ 138 (215)
..+.|.++|+|++++. +|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++|+ +|++|+.|+
T Consensus 30 ~~~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD 108 (183)
T ss_dssp CGGGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC
T ss_pred ccccCCCCCceeccccccCCcEecHHHhCCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC
Confidence 4678999999999999 99999999999999999999 99999999999999999999999889 999999987
Q ss_pred --HHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 139 --SSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 139 --~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
++.+++|+++++++|+++.|..+.+.+.|+... ...+| ++||||++|+|++.+.|....+...+.+.++++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--v~~~P--~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 109 YSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVP--ASVIP--TTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp CCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCC--TTCCS--EEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCccEEECCcchHHHHhccCC--CCCCC--eEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 899999999999999999999999999986321 01277 999999999999999986544443333334343
No 48
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.96 E-value=3e-28 Score=195.84 Aligned_cols=145 Identities=23% Similarity=0.443 Sum_probs=128.1
Q ss_pred cCCCCCCCCCeEEeCC-CCC--eeecCC-cCCCcEEEEEEcCCCChhhH-HHHHHHHHHHHHHHHcCc-EEEEEeCCCHH
Q 028030 67 KVSKGQAPPSFTLKDQ-EGR--NVSLSK-FKGKPVVVYFYPADETPGCT-KQACAFRDSYEKFKKAGA-EVIGISGDDSS 140 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~-~g~--~~~l~~-~~gk~~ll~f~~a~~C~~C~-~~~~~l~~l~~~~~~~~v-~vv~vs~d~~~ 140 (215)
.+++|+++|+|++++. +|+ .++|++ ++||++||+||+++||++|. .+++.|++++++|+++|+ +|++|+.|+++
T Consensus 2 ~~~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~ 81 (241)
T 1nm3_A 2 SSMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTF 81 (241)
T ss_dssp -CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHH
T ss_pred CccCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHH
Confidence 3678999999999996 787 899999 89999999999999999999 999999999999999999 99999999999
Q ss_pred HHHHHHHHcCCC-eEEEEcCChhHHHHhCCCccC--CC----CCCccEEEEEcCCCcEEEEEeCCCCCC-----ccHHHH
Q 028030 141 SHKAFAKKYRLP-YTLLSDEGNKVRKEWGVPADF--FG----SLPGRQTYILDKNGVVQLIYNNQFQPE-----KHIDET 208 (215)
Q Consensus 141 ~~~~~~~~~~~~-~~~~~d~~~~~~~~~g~~~~~--~g----~~p~~~~~lid~~G~v~~~~~g~~~~~-----~~~~~i 208 (215)
.+++|+++++++ |+++.|.++++.++||+.... .| ..| ++||| ++|+|++.+.+..... ...+++
T Consensus 82 ~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p--~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~i 158 (241)
T 1nm3_A 82 VMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWR--YSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTM 158 (241)
T ss_dssp HHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECC--EEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHH
T ss_pred HHHHHHHhcCCCceEEEECCCcHHHHHhCceeecccccCccccee--EEEEE-ECCEEEEEEEeccCCCccceecCHHHH
Confidence 999999999997 999999999999999997421 12 135 99999 9999999998864433 578999
Q ss_pred HHHHhc
Q 028030 209 LKFLQS 214 (215)
Q Consensus 209 l~~l~~ 214 (215)
++.|+.
T Consensus 159 l~~l~~ 164 (241)
T 1nm3_A 159 LKYLAP 164 (241)
T ss_dssp HHHHCT
T ss_pred HHHhhh
Confidence 988864
No 49
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.96 E-value=6.5e-28 Score=182.68 Aligned_cols=145 Identities=17% Similarity=0.273 Sum_probs=117.7
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------C
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD--------D 138 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d--------~ 138 (215)
.+++|+++|+|++++.+|+++++++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|+.| +
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~ 82 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNV-ACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWA 82 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred cccCCcccccceeecCCCCCccHHHcCCCEEEEEEe-eccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCC
Confidence 457899999999999999999999999999999999 9999999999999999999999989999999985 4
Q ss_pred HHHHHHH-HHHcCCCeEEEE--cCChhHHH-Hh--------CCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHH
Q 028030 139 SSSHKAF-AKKYRLPYTLLS--DEGNKVRK-EW--------GVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHID 206 (215)
Q Consensus 139 ~~~~~~~-~~~~~~~~~~~~--d~~~~~~~-~~--------g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~ 206 (215)
.+.+++| .++++++|+++. |.++.... .| |+.......+| ++||||++|+|++.+.|..+.+...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P--~~~lid~~G~i~~~~~g~~~~~~l~~ 160 (169)
T 2v1m_A 83 EAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNF--SKFLVDRQGQPVKRYSPTTAPYDIEG 160 (169)
T ss_dssp HHHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTT--CEEEECTTSCEEEEECTTSCGGGGHH
T ss_pred HHHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccc--eEEEECCCCCEEEEcCCCCCHHHHHH
Confidence 6889999 599999999985 66655432 22 54321111256 99999999999999998766666666
Q ss_pred HHHHHHhc
Q 028030 207 ETLKFLQS 214 (215)
Q Consensus 207 ~il~~l~~ 214 (215)
.+.++|++
T Consensus 161 ~i~~ll~~ 168 (169)
T 2v1m_A 161 DIMELLEK 168 (169)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 66666653
No 50
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.4e-28 Score=192.87 Aligned_cols=123 Identities=21% Similarity=0.360 Sum_probs=116.3
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCc-EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC--------
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG-------- 136 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~-~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~-------- 136 (215)
..+++|+++|+|++++.+|+.+++++++||+ +||+|| ++||++|+.+++.|++++++|+++|++||+|+.
T Consensus 30 ~~l~~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~ 108 (218)
T 3u5r_E 30 NSITLGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFI-SNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPE 108 (218)
T ss_dssp CCCCTTCBCCCCCEECTTCCEECGGGGTTCSEEEEEEC-CSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGG
T ss_pred CcCCCCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEE-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 4678999999999999999999999999996 999999 999999999999999999999998999999999
Q ss_pred CCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEe
Q 028030 137 DDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 137 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
|+++.+++|+++++++|+++.|.++++.+.|++.. +| ++||||++|+|++...
T Consensus 109 d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~-----~P--~~~liD~~G~i~~~g~ 161 (218)
T 3u5r_E 109 ETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAAC-----TP--DFFLYDRERRLVYHGQ 161 (218)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCE-----ES--EEEEECTTCBEEEEEC
T ss_pred CCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCC-----CC--eEEEECCCCcEEEecc
Confidence 67899999999999999999999999999999987 88 9999999999997753
No 51
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.96 E-value=1.7e-28 Score=195.02 Aligned_cols=146 Identities=21% Similarity=0.353 Sum_probs=124.7
Q ss_pred CCCCCCCCCeEEeCC--CCCeeecCCcCCC-cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHH
Q 028030 68 VSKGQAPPSFTLKDQ--EGRNVSLSKFKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKA 144 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~--~g~~~~l~~~~gk-~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 144 (215)
+.+|+++|+|++.+. +| .+++++++|| ++||+||+++||++|..+++.|++++++|+++|++||+||.|+.+.+++
T Consensus 3 l~iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~ 81 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDK 81 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHH
T ss_pred CCCCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHH
Confidence 678999999999999 99 8999999998 7777775599999999999999999999999999999999999998888
Q ss_pred HHH-------HcCCCeEEEEcCChhHHHHhCCCccC----CC-CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHH
Q 028030 145 FAK-------KYRLPYTLLSDEGNKVRKEWGVPADF----FG-SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 145 ~~~-------~~~~~~~~~~d~~~~~~~~~g~~~~~----~g-~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l 212 (215)
|.+ +++++|+++.|.++++++.||+.... .| ....|++||||++|+|++.+.+......+.+++++.|
T Consensus 82 ~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i 161 (220)
T 1xcc_A 82 WIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVL 161 (220)
T ss_dssp HHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHH
Confidence 887 47889999999999999999996311 11 0123499999999999999877655556788888777
Q ss_pred hc
Q 028030 213 QS 214 (215)
Q Consensus 213 ~~ 214 (215)
++
T Consensus 162 ~~ 163 (220)
T 1xcc_A 162 KS 163 (220)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 52
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.96 E-value=1.6e-27 Score=177.93 Aligned_cols=137 Identities=23% Similarity=0.369 Sum_probs=122.9
Q ss_pred CCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC--HHHHHHH
Q 028030 68 VSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD--SSSHKAF 145 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~--~~~~~~~ 145 (215)
+.+|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|.++++++++.++.+++|+.|. .+.+++|
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEF 80 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHH
Confidence 36899999999999999999999999999999999 99999999999999999999998889999999986 7899999
Q ss_pred HHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCC-CccHHHHHHHH
Q 028030 146 AKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQP-EKHIDETLKFL 212 (215)
Q Consensus 146 ~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~-~~~~~~il~~l 212 (215)
+++++++|+++.|.+..+.+.|++.. +| +++|||++|+|++.+.|.... .+.+.+.++.|
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 81 FRKTGFTLPVLLDADKRVGKLYGTTG-----VP--ETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp HHHHCCCCCEEECTTCHHHHHHTCCS-----BC--EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC
T ss_pred HHHcCCCeeEEecCchHHHHHhCCCC-----CC--eEEEECCCCcEEEEEcCCCccccHHHHHHHHHH
Confidence 99999999999999999999999987 88 999999999999999986532 23444444443
No 53
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.96 E-value=4e-28 Score=184.00 Aligned_cols=145 Identities=20% Similarity=0.379 Sum_probs=116.8
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------C
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD--------D 138 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d--------~ 138 (215)
.+++|+++|+|++.|.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|+.| +
T Consensus 5 ~~~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 5 TSKNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNV-ASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp -----CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred cCCCCccccceEEEcCCCCEecHHHhCCCEEEEEEE-eccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 457899999999999999999999999999999999 9999999999999999999999889999999985 5
Q ss_pred HHHHHHHHH-HcCCCeEEE--EcCChhHH----H-----HhCCCccCCCCCC-ccEEEEEcCCCcEEEEEeCCCCCCccH
Q 028030 139 SSSHKAFAK-KYRLPYTLL--SDEGNKVR----K-----EWGVPADFFGSLP-GRQTYILDKNGVVQLIYNNQFQPEKHI 205 (215)
Q Consensus 139 ~~~~~~~~~-~~~~~~~~~--~d~~~~~~----~-----~~g~~~~~~g~~p-~~~~~lid~~G~v~~~~~g~~~~~~~~ 205 (215)
.+.+++|++ +++++|+++ .|.++... + .+|+.. ..+| ++++||||++|+|++.+.|..+.+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~---~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~ 160 (170)
T 2p5q_A 84 NDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFG---DDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLE 160 (170)
T ss_dssp HHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTC---SCCCSTTCEEEECTTSCEEEEECTTSCGGGGH
T ss_pred HHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccC---CcccccccEEEECCCCCEEEeeCCCCCHHHHH
Confidence 789999999 789999998 56665432 1 224411 0144 348999999999999999976666666
Q ss_pred HHHHHHHhcC
Q 028030 206 DETLKFLQSS 215 (215)
Q Consensus 206 ~~il~~l~~s 215 (215)
+.+.++|++|
T Consensus 161 ~~i~~ll~~s 170 (170)
T 2p5q_A 161 RDIKQLLEIS 170 (170)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHhhcC
Confidence 6666666654
No 54
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.96 E-value=7.5e-28 Score=183.31 Aligned_cols=133 Identities=23% Similarity=0.327 Sum_probs=116.0
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCCh-hhHHHHHHHHHHHHHHHHcC--cEEEEEeCC----C
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETP-GCTKQACAFRDSYEKFKKAG--AEVIGISGD----D 138 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~-~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d----~ 138 (215)
..+.+|+++|+|++.|.+|+.+++++++||++||+|| ++||+ +|..+++.|.++++++++++ ++||+|+.| +
T Consensus 5 ~~l~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~ 83 (174)
T 1xzo_A 5 IKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFI-FTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 83 (174)
T ss_dssp CCSCCCEECCCCEEECTTSCEEETGGGTTCCEEEEEE-CSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred CcCccccccCCcEEEcCCCCEEehhhcCCCEEEEEEE-cCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCC
Confidence 5678999999999999999999999999999999999 99999 99999999999999999886 999999986 6
Q ss_pred HHHHHHHHHHcCCCe---EEEEcCChhHHHHhCCC---------ccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 139 SSSHKAFAKKYRLPY---TLLSDEGNKVRKEWGVP---------ADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 139 ~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~g~~---------~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
++.+++|+++++++| +++.|.+.++.+.|++. ...++..+.|++||||++|+|++.+.|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~ 156 (174)
T 1xzo_A 84 PKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVE 156 (174)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSS
T ss_pred HHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCC
Confidence 789999999999998 99999888877776531 11123344459999999999999999865
No 55
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.96 E-value=7.4e-28 Score=179.41 Aligned_cols=134 Identities=25% Similarity=0.539 Sum_probs=120.3
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC-CHHHHHHHHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-DSSSHKAFAK 147 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-~~~~~~~~~~ 147 (215)
++|+++|+|++.|.+|+.+++++++||++||+|| ++||++|+.+++.|.+++++++++++.|++|+.| +++.+++|++
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 79 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMK 79 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHH
Confidence 3789999999999999999999999999999999 9999999999999999999999888999999985 5689999999
Q ss_pred HcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHH
Q 028030 148 KYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKF 211 (215)
Q Consensus 148 ~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~ 211 (215)
+++++|+++.|.+..+.+.|++.. +| ++++||++|+|+..+.|..+ .+.+.+.++.
T Consensus 80 ~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~G~~~-~~~l~~~l~~ 135 (151)
T 2f9s_A 80 SYGVNFPVVLDTDRQVLDAYDVSP-----LP--TTFLINPEGKVVKVVTGTMT-ESMIHDYMNL 135 (151)
T ss_dssp HHTCCSCEEEETTSHHHHHTTCCS-----SC--EEEEECTTSEEEEEEESCCC-HHHHHHHHHH
T ss_pred HcCCCceEEECCchHHHHhcCCCC-----CC--eEEEECCCCcEEEEEeCCCC-HHHHHHHHHH
Confidence 999999999999999999999987 88 99999999999999988643 3334444443
No 56
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.95 E-value=6.7e-28 Score=186.31 Aligned_cols=138 Identities=19% Similarity=0.277 Sum_probs=113.3
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-------- 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-------- 137 (215)
..+++|+++|+|+++|.+|+++++++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|+.|
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~ 99 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNV-ASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPG 99 (185)
T ss_dssp GGGGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCS
T ss_pred hhccCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEe-cCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCC
Confidence 4567899999999999999999999999999999999 9999999999999999999999989999999975
Q ss_pred CHHHHHHHHHHcCCCeEEEE--cCChh----HHHHh-------CCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCcc
Q 028030 138 DSSSHKAFAKKYRLPYTLLS--DEGNK----VRKEW-------GVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKH 204 (215)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~--d~~~~----~~~~~-------g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~ 204 (215)
+++.+++|+++++++|+++. |.++. ++..+ |+.......+| ++||||++|+|++.+.|..+.+..
T Consensus 100 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P--~~~lid~~G~i~~~~~g~~~~~~l 177 (185)
T 2gs3_A 100 SNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNF--TKFLIDKNGCVVKRYGPMEEPLVI 177 (185)
T ss_dssp CHHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSC--CEEEECTTSCEEEEECTTSCGGGG
T ss_pred CHHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccc--eEEEECCCCCEEEeeCCCCCHHHH
Confidence 46889999999999999986 44443 33333 33221111245 999999999999999986555443
Q ss_pred HH
Q 028030 205 ID 206 (215)
Q Consensus 205 ~~ 206 (215)
.+
T Consensus 178 ~~ 179 (185)
T 2gs3_A 178 EK 179 (185)
T ss_dssp GG
T ss_pred HH
Confidence 33
No 57
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.95 E-value=9.6e-28 Score=193.60 Aligned_cols=147 Identities=26% Similarity=0.489 Sum_probs=126.7
Q ss_pred cCCCCCCCCCeEEeCCCCCeeec-CCc--CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHH
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSL-SKF--KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHK 143 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l-~~~--~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 143 (215)
.+.+|+++|+|++.+.+| .+++ +++ +||++||+||+++||++|..+++.|++++++|+++|++||+||+|+.+.+.
T Consensus 4 ~~~iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~ 82 (249)
T 3a2v_A 4 IPLIGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHI 82 (249)
T ss_dssp ECCTTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred cCCCCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHH
Confidence 457999999999999999 7999 999 999877766559999999999999999999999999999999999999888
Q ss_pred HHHHH------cCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 144 AFAKK------YRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 144 ~~~~~------~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+|.+. .+++||++.|.++++++.||+.....|....|.+||||++|+|++.+.+......+.+++++.|++
T Consensus 83 ~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~a 159 (249)
T 3a2v_A 83 KWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKA 159 (249)
T ss_dssp HHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHH
Confidence 88875 578999999999999999999854333223349999999999999988866555678888887753
No 58
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=1.1e-27 Score=180.24 Aligned_cols=138 Identities=24% Similarity=0.478 Sum_probs=125.1
Q ss_pred cccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHH
Q 028030 65 SAKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKA 144 (215)
Q Consensus 65 ~~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 144 (215)
...+++|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|.++++++++.++.+++|+.|+ .+++
T Consensus 12 ~~~~~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~~~~ 88 (158)
T 3hdc_A 12 APLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--RFPE 88 (158)
T ss_dssp SCCCCTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--SCCG
T ss_pred CcccCCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--HHHH
Confidence 35678999999999999999999999999999999999 99999999999999999999998889999999988 5788
Q ss_pred HHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 145 FAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 145 ~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
|+++++++|+++.|.+..+.+.|++.. +| ++||||++|+|+..+.|....+ .+++++.+++
T Consensus 89 ~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~G~~~~~--~~~~~~~~~~ 149 (158)
T 3hdc_A 89 KYRRAPVSFNFLSDATGQVQQRYGANR-----LP--DTFIVDRKGIIRQRVTGGIEWD--APKVVSYLKS 149 (158)
T ss_dssp GGGGCCCSCEEEECTTSHHHHHTTCCS-----SS--EEEEECTTSBEEEEEESCCCTT--SHHHHHHHHT
T ss_pred HHHHcCCCceEEECchHHHHHHhCCCC-----cc--eEEEEcCCCCEEEEEeCCCccc--hHHHHHHHHh
Confidence 999999999999999999999999987 88 9999999999999999965443 3666666553
No 59
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.95 E-value=2.4e-27 Score=181.88 Aligned_cols=137 Identities=22% Similarity=0.397 Sum_probs=119.8
Q ss_pred ccccCCCCCCCCCeEEeCCCC--CeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC-CCHH
Q 028030 64 ISAKVSKGQAPPSFTLKDQEG--RNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG-DDSS 140 (215)
Q Consensus 64 ~~~~~~~g~~~P~f~l~~~~g--~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~-d~~~ 140 (215)
....+.+|+++|+|++.+.+| +.+++++++||++||+|| ++||++|+.+++.|++++++ |++||+|+. |+++
T Consensus 26 ~~~~~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~ 100 (176)
T 3kh7_A 26 ELPSALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNA 100 (176)
T ss_dssp GSTTTTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHH
T ss_pred cccccccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHH
Confidence 445678999999999999999 889999999999999999 99999999999999998775 799999995 6789
Q ss_pred HHHHHHHHcCCCeE-EEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHH
Q 028030 141 SHKAFAKKYRLPYT-LLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 141 ~~~~~~~~~~~~~~-~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l 212 (215)
.+++|+++++++|+ ++.|.+..+.+.||+.. +| ++||||++|+|++.+.|..+.+...+.+.++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 101 AAIKWLNELHNPYLLSISDADGTLGLDLGVYG-----AP--ETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp HHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS-----SC--EEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred HHHHHHHHcCCCCceEEECCcchHHHHcCCCC-----CC--eEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999987 57899999999999987 88 99999999999999999765444333333333
No 60
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=2.1e-27 Score=177.09 Aligned_cols=137 Identities=23% Similarity=0.454 Sum_probs=121.8
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC--CCHHHHHHHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG--DDSSSHKAFA 146 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~--d~~~~~~~~~ 146 (215)
.+|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++++++++.|++|+. |+.+.+++|+
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~ 81 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFW-FPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYV 81 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHH
Confidence 4799999999999999999999999999999999 999999999999999999999988999999994 6789999999
Q ss_pred HHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 147 KKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 147 ~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
++++++|+++.|.+..+.+.||+.. +| ++++||++|+|+..+.|..+.+...+.+.++|+
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~i~~-----~P--~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 82 KDYGLPFTVMYDADKAVGQAFGTQV-----YP--TSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp HHTTCCSEEEECSSCHHHHHHTCCS-----SS--EEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHcCCCceEEcCchHHHHHHcCCCc-----cC--eEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999987 88 999999999999999986544443333444443
No 61
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=1.4e-27 Score=178.78 Aligned_cols=123 Identities=25% Similarity=0.350 Sum_probs=111.5
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCH-HHHHHH
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDS-SSHKAF 145 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~-~~~~~~ 145 (215)
....|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++|++|++|+.|+. +.+++|
T Consensus 8 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~ 86 (152)
T 2lrt_A 8 DKIKEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFT-VYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTS 86 (152)
T ss_dssp SSSCTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHH
T ss_pred hhccCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEE-cCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 446789999999999999999999999999999999 999999999999999999999998999999999865 556777
Q ss_pred HHHcCCCeEEEEcCChh---HHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 146 AKKYRLPYTLLSDEGNK---VRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 146 ~~~~~~~~~~~~d~~~~---~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
.+ +++|+++.|.++. +.+.||+.. +| ++||||++|+|++.+.|..
T Consensus 87 ~~--~~~~~~~~d~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~ 134 (152)
T 2lrt_A 87 AD--NLPWVCVRDANGAYSSYISLYNVTN-----LP--SVFLVNRNNELSARGENIK 134 (152)
T ss_dssp HT--TCSSEEEECSSGGGCHHHHHHTCCS-----CS--EEEEEETTTEEEEETTTCS
T ss_pred Hh--CCCceEEECCCCcchHHHHHcCccc-----Cc--eEEEECCCCeEEEecCCHH
Confidence 64 4789999999886 999999987 88 9999999999999988853
No 62
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.95 E-value=1.8e-27 Score=183.41 Aligned_cols=133 Identities=22% Similarity=0.329 Sum_probs=119.2
Q ss_pred ccccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCH--HH
Q 028030 64 ISAKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDS--SS 141 (215)
Q Consensus 64 ~~~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~--~~ 141 (215)
....+.+|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|+++++++++++++|++|+.|.. +.
T Consensus 30 ~~~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 108 (186)
T 1jfu_A 30 ALTMASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLW-ATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEK 108 (186)
T ss_dssp TCEECCSCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTH
T ss_pred hhccccCCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEE-eCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHH
Confidence 345678999999999999999999999999999999999 999999999999999999999977899999999854 78
Q ss_pred HHHHHHHcCCC-eEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 142 HKAFAKKYRLP-YTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 142 ~~~~~~~~~~~-~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+++|+++++++ |+++.|.++.+.+.|++..+.. .+| ++||||++|+|++.+.|...
T Consensus 109 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~P--~~~lid~~G~i~~~~~g~~~ 165 (186)
T 1jfu_A 109 PKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRAL-GMP--TSVLVDPQGCEIATIAGPAE 165 (186)
T ss_dssp HHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCS-SSS--EEEEECTTSBEEEEEESCCC
T ss_pred HHHHHHHcCCCCCceEECCcchHHHHhccccccC-CCC--EEEEECCCCCEEEEEecCCc
Confidence 99999999994 9999999999999999963211 277 99999999999999988654
No 63
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.95 E-value=3.7e-28 Score=186.88 Aligned_cols=144 Identities=19% Similarity=0.269 Sum_probs=113.6
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------CHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD--------DSS 140 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d--------~~~ 140 (215)
.+|..+|+|+++|.+|+.+++++++||++||+|| ++||++|+.++|.|++++++|+++|++||+|++| +++
T Consensus 13 ~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~ 91 (180)
T 3kij_A 13 PKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNV-ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSK 91 (180)
T ss_dssp CCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHH
T ss_pred CCcCcccceEEecCCCCEecHHHcCCCEEEEEEE-ecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHH
Confidence 5789999999999999999999999999999999 9999999999999999999999989999999964 679
Q ss_pred HHHHHHHH-cCCCeEEEEc--CChhHH-HHhCCCccCCCCCC--ccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 141 SHKAFAKK-YRLPYTLLSD--EGNKVR-KEWGVPADFFGSLP--GRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 141 ~~~~~~~~-~~~~~~~~~d--~~~~~~-~~~g~~~~~~g~~p--~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
.+++|+++ ++++|+++.+ ..+... ..|+......+.+| ++++||||++|+|++.+.|....+...+++.++|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 92 EVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp HHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999 9999998653 221110 11111000011255 12399999999999999997776665566655554
No 64
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.95 E-value=3.9e-27 Score=177.57 Aligned_cols=138 Identities=18% Similarity=0.341 Sum_probs=119.4
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC-HHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD-SSSHKA 144 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~-~~~~~~ 144 (215)
..+++|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|.+++++++++++.+++|+.|+ .+.+++
T Consensus 6 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~ 84 (165)
T 3or5_A 6 QADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKN 84 (165)
T ss_dssp -CCCCCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHH
T ss_pred hhhcCCCCCCCceeeCCCCCEechhHcCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 3467899999999999999999999999999999999 99999999999999999999998899999999876 788999
Q ss_pred HHHHcCCCeEEEEcCChhHHHHh------CCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHH
Q 028030 145 FAKKYRLPYTLLSDEGNKVRKEW------GVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 145 ~~~~~~~~~~~~~d~~~~~~~~~------g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l 212 (215)
|+++++++|+++.|.. ++.+.| ++.. +| +++|||++|+|+..+.|....+...+.+.++|
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~-----~P--~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 85 YMKTQGIIYPVMMATP-ELIRAFNGYIDGGITG-----IP--TSFVIDASGNVSGVIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp HHHHHTCCSCEEECCH-HHHHHHHTTSTTCSCS-----SS--EEEEECTTSBEEEEECSCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCceEecCH-HHHHHHhhhhccCCCC-----CC--eEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 9999999999999876 888888 5554 78 99999999999999988654433333333333
No 65
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.95 E-value=2.1e-27 Score=184.37 Aligned_cols=123 Identities=21% Similarity=0.361 Sum_probs=115.6
Q ss_pred ccCCCCCCCCCeEEe-CCCCCeeecCCcCCCc-EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC-------
Q 028030 66 AKVSKGQAPPSFTLK-DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG------- 136 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~-~~~g~~~~l~~~~gk~-~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~------- 136 (215)
..+++|+++|+|++. +.+|+.+++++++||+ +||+|| ++||++|+.+++.|++++++|++++++|++|+.
T Consensus 16 ~~~~~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~ 94 (196)
T 2ywi_A 16 NMFPLGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYP 94 (196)
T ss_dssp CCCCTTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCG
T ss_pred cCCCcCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 457899999999999 9999999999999996 999999 999999999999999999999988999999998
Q ss_pred -CCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEe
Q 028030 137 -DDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 137 -d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
|+.+.+++|+++++++|+++.|.+.++.+.|++.. +| ++||||++|+|++.+.
T Consensus 95 ~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~ 148 (196)
T 2ywi_A 95 EDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAAC-----TP--DFYIFDRDLKCVYRGQ 148 (196)
T ss_dssp GGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCE-----ES--EEEEEETTCBEEEEEC
T ss_pred ccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCC-----CC--eEEEEcCCCeEEEccc
Confidence 57899999999999999999999999999999987 88 9999999999999853
No 66
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.95 E-value=6.4e-28 Score=187.17 Aligned_cols=143 Identities=16% Similarity=0.302 Sum_probs=116.7
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-------- 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-------- 137 (215)
..++.|+++|+|+++|.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|+.|
T Consensus 20 s~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 98 (190)
T 2vup_A 20 SHMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPG 98 (190)
T ss_dssp ----CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCS
T ss_pred ccCCCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCC
Confidence 4577899999999999999999999999999999999 9999999999999999999999989999999987
Q ss_pred CHHHHHHHH-HHcCCCeEEEE--cCChhH----HH-----HhCCCccCCCCCC----ccEEEEEcCCCcEEEEEeCCCCC
Q 028030 138 DSSSHKAFA-KKYRLPYTLLS--DEGNKV----RK-----EWGVPADFFGSLP----GRQTYILDKNGVVQLIYNNQFQP 201 (215)
Q Consensus 138 ~~~~~~~~~-~~~~~~~~~~~--d~~~~~----~~-----~~g~~~~~~g~~p----~~~~~lid~~G~v~~~~~g~~~~ 201 (215)
+++.+++|+ ++++++|+++. |.++.+ ++ .|++.. +| ++++||||++|+|++.+.|..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~-----~P~i~~~~~~~lid~~G~i~~~~~g~~~~ 173 (190)
T 2vup_A 99 NEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILK-----TKAIKWNFTSFLIDRDGVPVERFSPGASV 173 (190)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGG-----CCSCCSTTCEEEECTTSCEEEEECTTCCH
T ss_pred CHHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCC-----CccccccceEEEECCCCcEEEEECCCCCH
Confidence 678999999 89999999986 555443 21 235543 33 23899999999999999986655
Q ss_pred CccHHHHHHHHhc
Q 028030 202 EKHIDETLKFLQS 214 (215)
Q Consensus 202 ~~~~~~il~~l~~ 214 (215)
+...+.+.++|++
T Consensus 174 ~~l~~~i~~ll~~ 186 (190)
T 2vup_A 174 KDIEKKLIPLLES 186 (190)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 5555555555543
No 67
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.95 E-value=9.4e-28 Score=185.01 Aligned_cols=133 Identities=20% Similarity=0.289 Sum_probs=111.9
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-------- 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-------- 137 (215)
..+++|+++|+|++++.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|++++++||+|+.|
T Consensus 19 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~ 97 (183)
T 2obi_A 19 DDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNV-ASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPG 97 (183)
T ss_dssp CCGGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred cCCcccCcccceEEEcCCCCEeeHHHcCCCEEEEEEe-CCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCC
Confidence 4568999999999999999999999999999999999 9999999999999999999999989999999975
Q ss_pred CHHHHHHHHHHcCCCeEEEE--cCChhH----HHHh-------CCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCC
Q 028030 138 DSSSHKAFAKKYRLPYTLLS--DEGNKV----RKEW-------GVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQP 201 (215)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~--d~~~~~----~~~~-------g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~ 201 (215)
+++++++|+++++++|+++. |.++.. ++.+ |+.......+| ++||||++|+|++.+.|..+.
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P--~~~lid~~G~i~~~~~g~~~~ 172 (183)
T 2obi_A 98 SNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNF--TKFLIDKNGCVVKRYGPMEEP 172 (183)
T ss_dssp CHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTT--CEEEECTTSCEEEEECTTSCT
T ss_pred CHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccc--eEEEECCCCCEEEEeCCCCCH
Confidence 57899999999999999986 665543 3322 43221111246 999999999999999885443
No 68
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.95 E-value=3.2e-27 Score=182.44 Aligned_cols=120 Identities=19% Similarity=0.329 Sum_probs=114.1
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC--------C
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG--------D 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~--------d 137 (215)
..+++|+++|+|++.|.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|+++ ++||+|+. |
T Consensus 5 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 5 PELPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFM-CNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp CCCCTTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred CcCCCCCCCCCceeecCCCCEEeHHHhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 4578999999999999999999999999999999999 999999999999999999999987 99999998 5
Q ss_pred CHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEE
Q 028030 138 DSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLI 194 (215)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~ 194 (215)
+.+.+++|+++++++|+++.|.++++.+.|++.. +| ++||||++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 83 APEKMAAFAEEHGIFFPYLLDETQEVAKAYRALR-----TP--EVFLFDERRLLRYH 132 (188)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCE-----ES--EEEEECTTCBEEEE
T ss_pred CHHHHHHHHHHhCCCceEEECCcchHHHHcCCCC-----CC--eEEEECCCCcEEEE
Confidence 7789999999999999999999999999999987 88 99999999999988
No 69
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.95 E-value=2.1e-27 Score=175.67 Aligned_cols=123 Identities=22% Similarity=0.379 Sum_probs=114.2
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecC--CcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHH-HHcCcEEEEEeCCC-HHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLS--KFKGKPVVVYFYPADETPGCTKQACAFRDSYEKF-KKAGAEVIGISGDD-SSS 141 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~--~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~-~~~~v~vv~vs~d~-~~~ 141 (215)
..+++|+++|+|++.+.+|+.++++ +++||++||+|| ++||++|+.+++.|.++++++ +++|+.+++|+.|. .+.
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~ 81 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFW-ASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREA 81 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHH
T ss_pred ccccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHH
Confidence 4678999999999999999999999 999999999999 999999999999999999999 77789999999974 579
Q ss_pred HHHHHHHcCCCeEEEEcC---ChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEe
Q 028030 142 HKAFAKKYRLPYTLLSDE---GNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 142 ~~~~~~~~~~~~~~~~d~---~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
+++|+++++++|+++.|. +..+.+.||+.. +| ++++||++|+|++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 82 WETAIKKDTLSWDQVCDFTGLSSETAKQYAILT-----LP--TNILLSPTGKILARDI 132 (148)
T ss_dssp HHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCS-----SS--EEEEECTTSBEEEESC
T ss_pred HHHHHHHcCCCceEEEccCCcchHHHHhcCCCC-----cC--EEEEECCCCeEEEecC
Confidence 999999999999999988 679999999997 88 9999999999998876
No 70
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.95 E-value=7.6e-27 Score=171.87 Aligned_cols=125 Identities=19% Similarity=0.447 Sum_probs=114.3
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC----CHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD----DSSS 141 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d----~~~~ 141 (215)
..+.+|+++|+|++.+.+|+.+++++ +||++||+|| ++||++|+.+++.|.++++++++.++.+++|+.| +.+.
T Consensus 7 ~~~~~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~ 84 (145)
T 3erw_A 7 AEEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQV 84 (145)
T ss_dssp -----CCSCCEEEEECTTSCEEEESC-TTSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHH
T ss_pred ccccCCCcCCCceeecCCCCEEeHHH-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHH
Confidence 45689999999999999999999999 9999999999 9999999999999999999998778999999985 7799
Q ss_pred HHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 142 HKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 142 ~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+++|.++++++|+++.|.+..+.+.|++.. +| +++++|++|+|+..+.|..
T Consensus 85 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~ 135 (145)
T 3erw_A 85 VEDFIKANKLTFPIVLDSKGELMKEYHIIT-----IP--TSFLLNEKGEIEKTKIGPM 135 (145)
T ss_dssp HHHHHHHTTCCSCEEECSSSHHHHHTTCCE-----ES--EEEEECTTCCEEEEEESCC
T ss_pred HHHHHHHcCCceeEEEcCchhHHHhcCcCc-----cC--eEEEEcCCCcEEEEEcCCc
Confidence 999999999999999999999999999987 88 9999999999999998854
No 71
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.95 E-value=4.1e-27 Score=185.52 Aligned_cols=144 Identities=15% Similarity=0.169 Sum_probs=112.6
Q ss_pred CCCCCCCCeEEeCCC-CCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------CH
Q 028030 69 SKGQAPPSFTLKDQE-GRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD--------DS 139 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~-g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d--------~~ 139 (215)
..++.+|+|++++.+ |+.+++++++||++||+|| ++||++|+.++|.|++++++|+++|++||+|+.| ++
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~Fw-atwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~ 99 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENV-ASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKN 99 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCH
T ss_pred hhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCH
Confidence 456889999999999 9999999999999999999 9999999999999999999999989999999986 46
Q ss_pred HHHHHHHH------HcCCCeEEEEcC--Chh----HHH----HhCC--------Ccc-------C---CCCCCccEEEEE
Q 028030 140 SSHKAFAK------KYRLPYTLLSDE--GNK----VRK----EWGV--------PAD-------F---FGSLPGRQTYIL 185 (215)
Q Consensus 140 ~~~~~~~~------~~~~~~~~~~d~--~~~----~~~----~~g~--------~~~-------~---~g~~p~~~~~li 185 (215)
+++++|++ +++++|+++.|. ++. ++. .++. ..+ . .+...+|++|||
T Consensus 100 ~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflI 179 (208)
T 2f8a_A 100 EEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLV 179 (208)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEE
T ss_pred HHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEE
Confidence 88999998 899999998642 222 222 2221 000 0 011112399999
Q ss_pred cCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 186 DKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 186 d~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
|++|+|+.++.|..+.+...+.|.++|+
T Consensus 180 D~~G~i~~~~~g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 180 GPDGVPLRRYSRRFQTIDIEPDIEALLS 207 (208)
T ss_dssp CTTSCEEEEECTTSCGGGGHHHHHHHHC
T ss_pred cCCCcEEEEeCCCCCHHHHHHHHHHHhh
Confidence 9999999999987766665555555554
No 72
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.95 E-value=4.9e-27 Score=173.50 Aligned_cols=137 Identities=15% Similarity=0.207 Sum_probs=121.5
Q ss_pred CCCCCCCCCeEE--eCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC------CH
Q 028030 68 VSKGQAPPSFTL--KDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD------DS 139 (215)
Q Consensus 68 ~~~g~~~P~f~l--~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d------~~ 139 (215)
+++|+++|+|++ .+.+|+.+++++++||++||+|| ++||++|+.+++.|.+++++++++ +.+++|+.| +.
T Consensus 1 l~~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~ 78 (148)
T 2b5x_A 1 MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDP 78 (148)
T ss_dssp CCTTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSH
T ss_pred CCCCCCCCCCccccccccCcccchhhcCCCEEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCH
Confidence 468999999999 68999999999999999999999 999999999999999999999877 999999986 67
Q ss_pred HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 140 SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+.+++|+++++++|+++.|.+..+.+.|++.. +| +++++|++|+|+..+.|..+.+...+.+.++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 79 GKIKETAAEHDITQPIFVDSDHALTDAFENEY-----VP--AYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp HHHHHHHHHTTCCSCEEECSSCHHHHHTCCCC-----SS--EEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCcceEECCchhHHHHhCCCC-----CC--EEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999999987 88 999999999999999886544443344444443
No 73
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.95 E-value=5.9e-27 Score=179.12 Aligned_cols=147 Identities=20% Similarity=0.317 Sum_probs=125.8
Q ss_pred ccCCCCCCCCCeEEeCCCC----------CeeecCCc-CCCcEEEEEEcCCCChhhHH-HHHHHHHHHHHHHHcCc-EEE
Q 028030 66 AKVSKGQAPPSFTLKDQEG----------RNVSLSKF-KGKPVVVYFYPADETPGCTK-QACAFRDSYEKFKKAGA-EVI 132 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g----------~~~~l~~~-~gk~~ll~f~~a~~C~~C~~-~~~~l~~l~~~~~~~~v-~vv 132 (215)
-.+++|+++|+.++....+ ++++|+++ +||++||+|||++||++|.. +++.|++++++|+++|+ +|+
T Consensus 8 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vi 87 (176)
T 4f82_A 8 HMIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIW 87 (176)
T ss_dssp CCCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEE
Confidence 3578999999988875433 77899997 99999998888999999999 99999999999999999 999
Q ss_pred EEeCCCHHHHHHHHHHcCCC--eEEEEcCChhHHHHhCCCccC--CC-CC-CccEEEEEcCCCcEEEEEeCCCC--CCcc
Q 028030 133 GISGDDSSSHKAFAKKYRLP--YTLLSDEGNKVRKEWGVPADF--FG-SL-PGRQTYILDKNGVVQLIYNNQFQ--PEKH 204 (215)
Q Consensus 133 ~vs~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~g~~~~~--~g-~~-p~~~~~lid~~G~v~~~~~g~~~--~~~~ 204 (215)
+||.|+++.+++|.++++++ |+++.|+++++.++||+..+. .| .+ ..|.+||| ++|+|++.+.+... ....
T Consensus 88 gIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~~~~~~~~~~~ 166 (176)
T 4f82_A 88 CVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAVEAPGKFEVSD 166 (176)
T ss_dssp EEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEECCTTCCSSSS
T ss_pred EEeCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEEcCCCCcchhh
Confidence 99999999999999999998 999999999999999997542 33 12 24589999 99999999886522 2256
Q ss_pred HHHHHHHHh
Q 028030 205 IDETLKFLQ 213 (215)
Q Consensus 205 ~~~il~~l~ 213 (215)
.+++|+.|+
T Consensus 167 a~~vL~~Lk 175 (176)
T 4f82_A 167 AASVLATLT 175 (176)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhh
Confidence 888888875
No 74
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.95 E-value=4.7e-28 Score=186.55 Aligned_cols=129 Identities=16% Similarity=0.224 Sum_probs=104.6
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-------- 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-------- 137 (215)
..+++|+++|+|++++.+|+++++++++||++||+|| ++||++|+.+++.|++++++|+++|++||+|+.|
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~ 99 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNV-ASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 99 (181)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred CcCCcCCccCceEeecCCCCEecHHHcCCCEEEEEEe-ccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCC
Confidence 4578999999999999999999999999999999999 9999999999999999999999989999999986
Q ss_pred CHHHHHHHHHH-cCCCeEEEE--cCChhHHH---HhCCCccCCCCCC-----ccEEEEEcCCCcEEEEEeCCCC
Q 028030 138 DSSSHKAFAKK-YRLPYTLLS--DEGNKVRK---EWGVPADFFGSLP-----GRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~~~~--d~~~~~~~---~~g~~~~~~g~~p-----~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+.+.+++|+++ ++++|+++. |.++.... .|++.. +| ++++||||++|+|++.+.|..+
T Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~-----~P~~~~~~~~~~lid~~G~i~~~~~g~~~ 168 (181)
T 2p31_A 100 SNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQT-----SGKEPTWNFWKYLVAPDGKVVGAWDPTVS 168 (181)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHH-----HSCCCCSTTCEEEECTTSCEEEEECTTSC
T ss_pred CHHHHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhc-----CCCccccceeEEEEcCCCCEEEEeCCCCC
Confidence 57899999999 999999985 44433221 232322 22 2279999999999999988543
No 75
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.95 E-value=4e-27 Score=180.09 Aligned_cols=141 Identities=19% Similarity=0.271 Sum_probs=116.8
Q ss_pred CCCCCCCCCeEEeCC----CC-----CeeecCCc-CCCcEEE-EEEcCCCChhhHHH-HHHHHHHHHHHHHcCcE-EEEE
Q 028030 68 VSKGQAPPSFTLKDQ----EG-----RNVSLSKF-KGKPVVV-YFYPADETPGCTKQ-ACAFRDSYEKFKKAGAE-VIGI 134 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~----~g-----~~~~l~~~-~gk~~ll-~f~~a~~C~~C~~~-~~~l~~l~~~~~~~~v~-vv~v 134 (215)
..+|+++|+|++++. +| +.++++++ +||++|| +|| ++||++|+.+ ++.|++++++|+++|++ |++|
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~-a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~I 85 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLP-GAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICV 85 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECS-CTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEec-CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 456779999999998 57 89999996 9975555 555 9999999999 99999999999999999 9999
Q ss_pred eCCCHHHHHHHHHHcCC--CeEEEEcCChhHHHHhCCCccCC----CC--CCccEEEEEcCCCcEEEEEeCCCCC---Cc
Q 028030 135 SGDDSSSHKAFAKKYRL--PYTLLSDEGNKVRKEWGVPADFF----GS--LPGRQTYILDKNGVVQLIYNNQFQP---EK 203 (215)
Q Consensus 135 s~d~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~g~~~~~~----g~--~p~~~~~lid~~G~v~~~~~g~~~~---~~ 203 (215)
+.|+++.+++|++++++ +|+++.|+++++.+.||+..... |. .| ++++|| +|+|++.+.+.... ..
T Consensus 86 s~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~--~t~~I~-~G~I~~~~~~~~~~~~~~~ 162 (171)
T 2pwj_A 86 AINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSER--WSAYVV-DGKVKALNVEESPSDVKVS 162 (171)
T ss_dssp ESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECC--EEEEEE-TTEEEEEEECSSTTCCSSS
T ss_pred eCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccce--eEEEEE-CCEEEEEEeecCCCCCccc
Confidence 99999999999999996 79999999999999999974321 21 34 789999 99999999885432 35
Q ss_pred cHHHHHHHH
Q 028030 204 HIDETLKFL 212 (215)
Q Consensus 204 ~~~~il~~l 212 (215)
..+++|+.|
T Consensus 163 ~~~~il~~l 171 (171)
T 2pwj_A 163 GAETILGQI 171 (171)
T ss_dssp SHHHHHHHC
T ss_pred CHHHHHhcC
Confidence 677777654
No 76
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=183.81 Aligned_cols=144 Identities=13% Similarity=0.145 Sum_probs=111.3
Q ss_pred CCCCCCCCeEEeCCC-CCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------CH
Q 028030 69 SKGQAPPSFTLKDQE-GRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD--------DS 139 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~-g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d--------~~ 139 (215)
..+..+|+|+++|.+ |+.++|++++||++||+|| ++||++|+ +++.|++++++|+++|++||+|+.| +.
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~Fw-At~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~ 107 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNV-ATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDN 107 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEE-CSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEe-CCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCH
Confidence 456789999999999 9999999999999999999 99999999 9999999999999999999999864 56
Q ss_pred HHHHHHHH------HcCCCeEEEEcC--Chh----HHHHh----C----CCcc----------CCCCCCccEEEEEcCCC
Q 028030 140 SSHKAFAK------KYRLPYTLLSDE--GNK----VRKEW----G----VPAD----------FFGSLPGRQTYILDKNG 189 (215)
Q Consensus 140 ~~~~~~~~------~~~~~~~~~~d~--~~~----~~~~~----g----~~~~----------~~g~~p~~~~~lid~~G 189 (215)
+++++|++ +++++||++.|. ++. ++..+ . +.+. ......+|++||||++|
T Consensus 108 ~~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G 187 (215)
T 2i3y_A 108 KEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDG 187 (215)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCC
Confidence 88999999 999999998753 222 22211 1 1100 00011124899999999
Q ss_pred cEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 190 VVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 190 ~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+|+.++.|....++..++|.++|++
T Consensus 188 ~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 188 IPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9999998866555544555555543
No 77
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.94 E-value=9.4e-27 Score=194.69 Aligned_cols=135 Identities=27% Similarity=0.444 Sum_probs=119.1
Q ss_pred CCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCC
Q 028030 72 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRL 151 (215)
Q Consensus 72 ~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~ 151 (215)
.++|+|+++|.+|++++|+|++||++||+|||..||+.|..+++.|++. ..+|++||+||.|+++.+++|.+++++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~~~~l 77 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKEKNDL 77 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHHHHTC
T ss_pred CCCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHHhhCC
Confidence 3789999999999999999999999999999999999999999888652 224799999999999999999999999
Q ss_pred CeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 152 PYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 152 ~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+||++.|+++++.+.||+... ...+| .+||||++|+|++.|.+ ..+..+.+++|+.|++
T Consensus 78 ~fp~l~D~~~~v~~~ygv~~~-~~~~r--~tfiId~~G~i~~~~~~-v~~~~h~~~~l~~~~~ 136 (322)
T 4eo3_A 78 KVTLLSDPEGILHEFFNVLEN-GKTVR--STFLIDRWGFVRKEWRR-VKVEGHVQEVKEALDR 136 (322)
T ss_dssp CSEEEECTTCHHHHHTTCEET-TEECC--EEEEECTTSBEEEEEES-CCSTTHHHHHHHHHHH
T ss_pred ceEEEEcCchHHHHhcCCCCC-CcCcc--EEEEECCCCEEEEEEeC-CCccccHHHHHHHHhh
Confidence 999999999999999999642 11245 99999999999999977 4667788999988864
No 78
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.94 E-value=1.1e-26 Score=177.31 Aligned_cols=147 Identities=14% Similarity=0.212 Sum_probs=123.4
Q ss_pred ccCCCCCCCCCeEEeCCCC-CeeecCCc-CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcE-EEEEeCCCHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEG-RNVSLSKF-KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAE-VIGISGDDSSSH 142 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g-~~~~l~~~-~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~-vv~vs~d~~~~~ 142 (215)
.++++|+++|+|++.+.++ ++++|+++ +||++||+|||..||+.|..+++.+++.+++++++|++ |++||.|+++.+
T Consensus 12 ~~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~ 91 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVM 91 (171)
T ss_dssp CCCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHH
T ss_pred CcccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHH
Confidence 4688999999999994332 89999995 99999999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHcCC--CeEEEEcCChhHHHHhCCCccC----CCCCCccEEEEEcCCCcEEEEEeCCCCC---CccHHHHHHHHh
Q 028030 143 KAFAKKYRL--PYTLLSDEGNKVRKEWGVPADF----FGSLPGRQTYILDKNGVVQLIYNNQFQP---EKHIDETLKFLQ 213 (215)
Q Consensus 143 ~~~~~~~~~--~~~~~~d~~~~~~~~~g~~~~~----~g~~p~~~~~lid~~G~v~~~~~g~~~~---~~~~~~il~~l~ 213 (215)
++|.+++++ +|+++.|+++++.++||+..+. .|....|.+|||| +|+|++.+...... ....+++|+.++
T Consensus 92 ~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 92 AAWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp HHHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEEETTSCSHHHHHHHHHHC----
T ss_pred HHHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 999999999 8999999999999999998542 1223456899999 99999999864322 234577777765
No 79
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.94 E-value=4.9e-28 Score=187.46 Aligned_cols=145 Identities=17% Similarity=0.317 Sum_probs=113.1
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-------- 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-------- 137 (215)
..+..+.++|+|+++|.+|+.+++++++||++||+|| ++||++|..++|.|++++++|+++|++||+|++|
T Consensus 18 ~~~~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~ 96 (187)
T 3dwv_A 18 KKMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPG 96 (187)
T ss_dssp --CTTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEE-CCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSS
T ss_pred hhhcCCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEe-cCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCC
Confidence 4567889999999999999999999999999999999 9999999999999999999999999999999986
Q ss_pred CHHHHHHHHH-HcCCCeEEEE--cCChhHHH-Hh--------CCCccCCCCCC-ccEEEEEcCCCcEEEEEeCCCCCCcc
Q 028030 138 DSSSHKAFAK-KYRLPYTLLS--DEGNKVRK-EW--------GVPADFFGSLP-GRQTYILDKNGVVQLIYNNQFQPEKH 204 (215)
Q Consensus 138 ~~~~~~~~~~-~~~~~~~~~~--d~~~~~~~-~~--------g~~~~~~g~~p-~~~~~lid~~G~v~~~~~g~~~~~~~ 204 (215)
+.+++++|++ .++++|+++. |.++.... .| ++.+ . ..+| ++++||||++|+|++.+.|....+..
T Consensus 97 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~-~-~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l 174 (187)
T 3dwv_A 97 NEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILA-T-KAIKWNFTSFLIDRDGVPVERFSPGASVKDI 174 (187)
T ss_dssp BTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBS-S-SSCCSTTCEEEECTTSCEEEEECTTCCHHHH
T ss_pred CHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccC-C-CccccceeEEEECCCCCEEEEECCCCCHHHH
Confidence 4688999998 5699999986 54443221 11 2222 0 0133 23899999999999999987655554
Q ss_pred HHHHHHHHh
Q 028030 205 IDETLKFLQ 213 (215)
Q Consensus 205 ~~~il~~l~ 213 (215)
.+.+.++|+
T Consensus 175 ~~~i~~lL~ 183 (187)
T 3dwv_A 175 EEKLIPLLG 183 (187)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHh
Confidence 444444444
No 80
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.94 E-value=1.4e-26 Score=174.50 Aligned_cols=135 Identities=14% Similarity=0.244 Sum_probs=115.1
Q ss_pred CCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChh-hHHHHHHHHHHHHHHHH----cCcEEEEEeCCC----HHHHH
Q 028030 73 APPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPG-CTKQACAFRDSYEKFKK----AGAEVIGISGDD----SSSHK 143 (215)
Q Consensus 73 ~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~-C~~~~~~l~~l~~~~~~----~~v~vv~vs~d~----~~~~~ 143 (215)
.+|+|++.|.+|+++++++++||++||+|| ++||++ |..+++.|+++++++++ .++++|+|+.|. ++.++
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~ 80 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIA 80 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHH
Confidence 579999999999999999999999999999 999998 99999999999999987 489999999874 78999
Q ss_pred HHHHHcCCCeEEEE---cCChhHHHHhCCCccCCCCCC-------------ccEEEEEcCCCcEEEEEeCCCCCCccHHH
Q 028030 144 AFAKKYRLPYTLLS---DEGNKVRKEWGVPADFFGSLP-------------GRQTYILDKNGVVQLIYNNQFQPEKHIDE 207 (215)
Q Consensus 144 ~~~~~~~~~~~~~~---d~~~~~~~~~g~~~~~~g~~p-------------~~~~~lid~~G~v~~~~~g~~~~~~~~~~ 207 (215)
+|+++++++|+++. |...++.+.||+.. +| ++++||||++|+|++.+.|..+.+...+.
T Consensus 81 ~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~-----~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 155 (164)
T 2ggt_A 81 NYVKEFSPKLVGLTGTREEVDQVARAYRVYY-----SPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAAS 155 (164)
T ss_dssp HHHHTTCSSCEEEECCHHHHHHHHHTTTCCE-----EEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHH
T ss_pred HHHHHcCCCeEEEeCCHHHHHHHHHhcCeEE-----EecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHH
Confidence 99999999999985 44567899999975 33 23799999999999999886554444444
Q ss_pred HHHHHh
Q 028030 208 TLKFLQ 213 (215)
Q Consensus 208 il~~l~ 213 (215)
+.++++
T Consensus 156 l~~ll~ 161 (164)
T 2ggt_A 156 IATHMR 161 (164)
T ss_dssp HHHHHG
T ss_pred HHHHHH
Confidence 444444
No 81
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.94 E-value=7.9e-27 Score=174.25 Aligned_cols=122 Identities=25% Similarity=0.389 Sum_probs=114.8
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC---CCHHHHH
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG---DDSSSHK 143 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~---d~~~~~~ 143 (215)
.+++|+++|+|++.+.+|+.+++++++ |++||+|| ++||++|+.+++.|.++++++ ++++++|+. |+.+.++
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~~ 78 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVVL 78 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTSC-SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechHHcC-CeEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHHH
Confidence 578999999999999999999999999 99999999 999999999999999999999 799999999 7889999
Q ss_pred HHHHHcCCCeEEEEc---CChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 144 AFAKKYRLPYTLLSD---EGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 144 ~~~~~~~~~~~~~~d---~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+|+++++++|+++.| ....+.+.||+.. +| ++||||++|+|+..+.|...
T Consensus 79 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~ 131 (154)
T 3ia1_A 79 EYMKTYPRFIPLLASDRDRPHEVAARFKVLG-----QP--WTFVVDREGKVVALFAGRAG 131 (154)
T ss_dssp HHHTTCTTEEECBCCSSCCHHHHHTTSSBCS-----SC--EEEEECTTSEEEEEEESBCC
T ss_pred HHHHHcCCCcccccccccchHHHHHHhCCCc-----cc--EEEEECCCCCEEEEEcCCCC
Confidence 999999999999998 7788999999987 88 99999999999999998644
No 82
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.94 E-value=3.1e-26 Score=179.24 Aligned_cols=148 Identities=16% Similarity=0.242 Sum_probs=118.9
Q ss_pred ccCCCCCCC--CCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChh-hHHHHHHHHHHHHHHHHc---CcEEEEEeCC--
Q 028030 66 AKVSKGQAP--PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPG-CTKQACAFRDSYEKFKKA---GAEVIGISGD-- 137 (215)
Q Consensus 66 ~~~~~g~~~--P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~-C~~~~~~l~~l~~~~~~~---~v~vv~vs~d-- 137 (215)
....+|+++ |+|++.|.+|+.+++++++||++||+|| ++||++ |..+++.|+++++++.++ +++||+|+.|
T Consensus 11 ~~~~~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~ 89 (200)
T 2b7k_A 11 ANRGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPA 89 (200)
T ss_dssp -----CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTT
T ss_pred hHhccCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCC
Confidence 445678886 9999999999999999999999999999 999997 999999999999999864 7999999987
Q ss_pred --CHHHHHHHHHHcCCCeEEEEc---CChhHHHHhCCCccC---------CCCCCccEEEEEcCCCcEEEEEeCCCCCCc
Q 028030 138 --DSSSHKAFAKKYRLPYTLLSD---EGNKVRKEWGVPADF---------FGSLPGRQTYILDKNGVVQLIYNNQFQPEK 203 (215)
Q Consensus 138 --~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~g~~~~~---------~g~~p~~~~~lid~~G~v~~~~~g~~~~~~ 203 (215)
+++.+++|+++++.+|+.+.+ ....+.+.||+.... +...+++++||||++|+|++.+.|..+.+.
T Consensus 90 ~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~ 169 (200)
T 2b7k_A 90 RDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKT 169 (200)
T ss_dssp TCCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTH
T ss_pred CCCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHH
Confidence 678999999999999988864 356788999987311 111234489999999999999988766666
Q ss_pred cHHHHHHHHhc
Q 028030 204 HIDETLKFLQS 214 (215)
Q Consensus 204 ~~~~il~~l~~ 214 (215)
..+++.+.|+.
T Consensus 170 ~~~~i~~~l~~ 180 (200)
T 2b7k_A 170 GVDKIVEHVKS 180 (200)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66777766653
No 83
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2e-27 Score=181.16 Aligned_cols=138 Identities=17% Similarity=0.295 Sum_probs=103.6
Q ss_pred CCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC--------CCHHHH
Q 028030 71 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG--------DDSSSH 142 (215)
Q Consensus 71 g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~--------d~~~~~ 142 (215)
|..+|+|+++|.+|+.+++++++||++||+|| ++||++|+ +++.|++++++|+++|++||+|+. |+.+.+
T Consensus 9 ~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 9 MSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp -CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC----------
T ss_pred hhheeeeEEEcCCCCEecHHHcCCCEEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHH
Confidence 56889999999999999999999999999999 99999999 999999999999998999999997 456789
Q ss_pred HHHH-HHcCCCeEEEEcCC--hh-HH--------HHhCCCccCCCCCC----ccEEEEEcCCCcEEEEEeCCCCCCccHH
Q 028030 143 KAFA-KKYRLPYTLLSDEG--NK-VR--------KEWGVPADFFGSLP----GRQTYILDKNGVVQLIYNNQFQPEKHID 206 (215)
Q Consensus 143 ~~~~-~~~~~~~~~~~d~~--~~-~~--------~~~g~~~~~~g~~p----~~~~~lid~~G~v~~~~~g~~~~~~~~~ 206 (215)
++|+ ++++++|+++.|.+ +. .. +.||+.. +| ++++||||++|+|++.+.|..+.+...+
T Consensus 87 ~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~-----~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 161 (171)
T 3cmi_A 87 AQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLG-----LRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSE 161 (171)
T ss_dssp --------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSS-----CCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHH
T ss_pred HHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCC-----CCcccccceEEEECCCCCEEEEeCCCCCHHHHHH
Confidence 9999 99999999997633 22 21 2355544 44 3389999999999999998766666666
Q ss_pred HHHHHHhcC
Q 028030 207 ETLKFLQSS 215 (215)
Q Consensus 207 ~il~~l~~s 215 (215)
.+.++|+++
T Consensus 162 ~i~~ll~~~ 170 (171)
T 3cmi_A 162 TIEELLKEV 170 (171)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhc
Confidence 666666653
No 84
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=1.7e-26 Score=172.25 Aligned_cols=132 Identities=20% Similarity=0.288 Sum_probs=112.1
Q ss_pred CCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 73 APPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 73 ~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
++|+|.+. .+|+.+++++++||++||+|| ++||++|+.+++.|+++++++++.+++|++|+.|+.+.+++|+++++++
T Consensus 4 pa~~~~~~-~~G~~~~l~~~~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~ 81 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSLKAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVS 81 (151)
T ss_dssp ---CEEET-TTCCEECGGGCCSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCS
T ss_pred Ccchhhcc-cCCCEecHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCC
Confidence 44555544 899999999999999999999 9999999999999999999998889999999999999999999999999
Q ss_pred eEEEEcC---ChhHHHHhC--CCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 153 YTLLSDE---GNKVRKEWG--VPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 153 ~~~~~d~---~~~~~~~~g--~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
|+++.|. ...+.+.|| +.. +| ++||||++|+|++.+.|..+. +.+++.++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~~-~~l~~~l~~l~~ 140 (151)
T 3raz_A 82 YPIWRYTGANSRNFMKTYGNTVGV-----LP--FTVVEAPKCGYRQTITGEVNE-KSLTDAVKLAHS 140 (151)
T ss_dssp SCEEEECCSCHHHHHHTTTCCSCC-----SS--EEEEEETTTTEEEECCSCCCH-HHHHHHHHHHHT
T ss_pred CceEecCccchHHHHHHhCCccCC-----CC--EEEEECCCCcEEEEECCCCCH-HHHHHHHHHHHH
Confidence 9999865 356888898 655 88 999999999999999986543 445556665543
No 85
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.94 E-value=5.6e-26 Score=173.39 Aligned_cols=141 Identities=18% Similarity=0.152 Sum_probs=113.2
Q ss_pred CCCCCCC-CeEEeCCCCCeeecCCcCCCcEEEEEEcCCCCh-hhHHHHHHHHHHHHHHHH--cCcEEEEEeCC---CHHH
Q 028030 69 SKGQAPP-SFTLKDQEGRNVSLSKFKGKPVVVYFYPADETP-GCTKQACAFRDSYEKFKK--AGAEVIGISGD---DSSS 141 (215)
Q Consensus 69 ~~g~~~P-~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~-~C~~~~~~l~~l~~~~~~--~~v~vv~vs~d---~~~~ 141 (215)
.+|+++| +|+++|.+|+++++++++||++||+|| ++||+ .|..+++.|+++++++++ .++++|+|+.| +++.
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~-~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~ 80 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPI-YTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLED 80 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEE-CTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHH
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEE-CCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHH
Confidence 5899999 999999999999999999999999999 99997 699999999999999975 46999999986 6799
Q ss_pred HHHHHHHcCCC---eEEEE--c--CChhHHHHhCCCcc--CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHH
Q 028030 142 HKAFAKKYRLP---YTLLS--D--EGNKVRKEWGVPAD--FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 142 ~~~~~~~~~~~---~~~~~--d--~~~~~~~~~g~~~~--~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l 212 (215)
+++|+++++++ |.++. | ...++.+.||+... .++..+.+++||||++|+|+..+.|.... .+++++.|
T Consensus 81 ~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~---~~~i~~~l 157 (170)
T 3me7_A 81 IKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYN---YLEFVNAL 157 (170)
T ss_dssp HHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCC---HHHHHHHH
T ss_pred HHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCC---HHHHHHHH
Confidence 99999999965 44543 2 34678888887531 12223345999999999999998885322 34444444
Q ss_pred h
Q 028030 213 Q 213 (215)
Q Consensus 213 ~ 213 (215)
+
T Consensus 158 ~ 158 (170)
T 3me7_A 158 R 158 (170)
T ss_dssp H
T ss_pred H
Confidence 3
No 86
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.94 E-value=3.9e-26 Score=179.75 Aligned_cols=143 Identities=9% Similarity=0.115 Sum_probs=108.2
Q ss_pred CCCCCCCCeEEeCCC-CCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------CH
Q 028030 69 SKGQAPPSFTLKDQE-GRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD--------DS 139 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~-g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d--------~~ 139 (215)
.....+|+|+++|.+ |+.++|++++||++||+|| ++||++| .++|.|++++++|+++|++||+|+.| +.
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~-At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~ 89 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNV-ASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGEN 89 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEE-CSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCH
T ss_pred cccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEe-CCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCH
Confidence 345689999999999 9999999999999999999 9999999 79999999999999999999999954 46
Q ss_pred HHHHHHHH------HcCCCeEEEEcC--Chh----HHHHh----C----CCcc----------CCCCCCccEEEEEcCCC
Q 028030 140 SSHKAFAK------KYRLPYTLLSDE--GNK----VRKEW----G----VPAD----------FFGSLPGRQTYILDKNG 189 (215)
Q Consensus 140 ~~~~~~~~------~~~~~~~~~~d~--~~~----~~~~~----g----~~~~----------~~g~~p~~~~~lid~~G 189 (215)
+++++|++ +++++||++.|. ++. ++..+ + +.+. ..+...+|++||||++|
T Consensus 90 ~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G 169 (207)
T 2r37_A 90 SEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDG 169 (207)
T ss_dssp HHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTS
T ss_pred HHHHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCC
Confidence 88999999 999999998753 222 22211 1 1100 00111124899999999
Q ss_pred cEEEEEeCCCCCCccHHHHHHHHh
Q 028030 190 VVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 190 ~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+|+.++.|....+...++|.++|+
T Consensus 170 ~i~~~~~g~~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 170 IPIMRWHHRTTVSNVKMDILSYMR 193 (207)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHh
Confidence 999999886655444444444443
No 87
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.94 E-value=3.7e-26 Score=170.06 Aligned_cols=138 Identities=20% Similarity=0.313 Sum_probs=121.7
Q ss_pred cCCCCCCCC-CeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC-HHHHHH
Q 028030 67 KVSKGQAPP-SFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD-SSSHKA 144 (215)
Q Consensus 67 ~~~~g~~~P-~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~-~~~~~~ 144 (215)
.+++|+++| +|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++++++++.+++|+.|+ .+.+++
T Consensus 2 ~l~~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 80 (152)
T 2lja_A 2 SLRSGNPSAASFSYPDINGKTVSLADLKGKYIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWEN 80 (152)
T ss_dssp CTTTTCCCSSSCEEEETTTEEEESTTTTTSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHH
T ss_pred ccccCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHH
Confidence 467999999 999999999999999999999999999 99999999999999999999998889999999875 578999
Q ss_pred HHHHcCCCe-EEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 145 FAKKYRLPY-TLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 145 ~~~~~~~~~-~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
|++++++++ +++.|.+.++.+.|++.. +| ++++||++|+|++.+.|..+ .+.++++++.+.
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~-~~~l~~~l~~~~ 142 (152)
T 2lja_A 81 MVTKDQLKGIQLHMGTDRTFMDAYLING-----IP--RFILLDRDGKIISANMTRPS-DPKTAEKFNELL 142 (152)
T ss_dssp HHHHHTCCSEEEECSSCTHHHHHTTCCS-----SC--CEEEECTTSCEEESSCCCTT-CHHHHHHHHHHH
T ss_pred HHHhcCCCCceeecCcchhHHHHcCcCC-----CC--EEEEECCCCeEEEccCCCCC-HHHHHHHHHHHh
Confidence 999999995 566788889999999987 88 99999999999998877543 345666665554
No 88
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.94 E-value=1e-25 Score=163.87 Aligned_cols=120 Identities=24% Similarity=0.446 Sum_probs=111.7
Q ss_pred CCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC-HHHHHHHHHH
Q 028030 70 KGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD-SSSHKAFAKK 148 (215)
Q Consensus 70 ~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~-~~~~~~~~~~ 148 (215)
+|.++|+|++.+.+|+.+++++++||++||+|| ++||++|+..++.|++++++++ ++.+++|+.|+ .+.+++|+++
T Consensus 1 ~~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (136)
T 1zzo_A 1 TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNK 77 (136)
T ss_dssp CCCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHH
T ss_pred CCCCCCCcccccCCCCEeeHHHhCCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHH
Confidence 367899999999999999999999999999999 9999999999999999999987 79999999865 7899999999
Q ss_pred cCC-CeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 149 YRL-PYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 149 ~~~-~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+++ +|+++.|.+..+.+.||+.. +| +++++|++|+|+ .+.|..+
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i~~-----~P--~~~~id~~g~i~-~~~g~~~ 122 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGVTQ-----QP--AYAFVDPHGNVD-VVRGRMS 122 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTCCS-----SS--EEEEECTTCCEE-EEESCCC
T ss_pred cCCCceEEEEcCCcHHHHHcCCCC-----Cc--eEEEECCCCCEE-EEecCCC
Confidence 999 89999999999999999987 88 999999999999 8888644
No 89
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.94 E-value=3.2e-26 Score=176.55 Aligned_cols=146 Identities=17% Similarity=0.332 Sum_probs=125.2
Q ss_pred CCCCCCCCCeEEeC--C---------CC----CeeecCC-cCCCcEEEEEEcCCCChhhH-HHHHHHHHHHHHH-HHcCc
Q 028030 68 VSKGQAPPSFTLKD--Q---------EG----RNVSLSK-FKGKPVVVYFYPADETPGCT-KQACAFRDSYEKF-KKAGA 129 (215)
Q Consensus 68 ~~~g~~~P~f~l~~--~---------~g----~~~~l~~-~~gk~~ll~f~~a~~C~~C~-~~~~~l~~l~~~~-~~~~v 129 (215)
+++|+++|+|++.+ . +| +.+++++ ++||++||+|||+.||+.|. .+++.+++.++++ ++.|+
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~ 80 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNF 80 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCC
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999988 4 67 7999999 59999999999999999999 9999999999999 99999
Q ss_pred E-EEEEeCCCHHHHHHHHHHcCC-CeEEEEcCChhHHHHhCCCccC--CC--CCCccEEEEEcCCCcEEEEEeCCCCC--
Q 028030 130 E-VIGISGDDSSSHKAFAKKYRL-PYTLLSDEGNKVRKEWGVPADF--FG--SLPGRQTYILDKNGVVQLIYNNQFQP-- 201 (215)
Q Consensus 130 ~-vv~vs~d~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~g~~~~~--~g--~~p~~~~~lid~~G~v~~~~~g~~~~-- 201 (215)
+ |++||.|+++.+++|.+++++ +|+++.|.++++.++||+..+. .| ....|.+|||| +|+|++.+......
T Consensus 81 ~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~v~~~~~~~ 159 (182)
T 1xiy_A 81 DDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMFQEKDKQHN 159 (182)
T ss_dssp SEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEEECSSCCTT
T ss_pred cEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEEEeCCcccc
Confidence 5 999999999999999999999 6999999999999999997432 23 12346899999 99999998764221
Q ss_pred -------CccHHHHHHHHhc
Q 028030 202 -------EKHIDETLKFLQS 214 (215)
Q Consensus 202 -------~~~~~~il~~l~~ 214 (215)
....+++|+.|++
T Consensus 160 ~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 160 IQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp CSSCCCSTTSHHHHHHHHHC
T ss_pred cccCcccCCCHHHHHHHHHh
Confidence 3678999999875
No 90
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.94 E-value=5.2e-26 Score=192.04 Aligned_cols=130 Identities=19% Similarity=0.334 Sum_probs=120.8
Q ss_pred ccCCCCCCCCCeE-----EeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC---
Q 028030 66 AKVSKGQAPPSFT-----LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD--- 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~-----l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d--- 137 (215)
..+.+|+++|+|+ +.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++|++++++||+|+.|
T Consensus 49 ~~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~-atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~ 127 (352)
T 2hyx_A 49 AQLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFW-AYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA 127 (352)
T ss_dssp SSCCCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG
T ss_pred cccCCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc
Confidence 4578999999999 999999999999999999999999 9999999999999999999999889999999974
Q ss_pred ---CHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCc
Q 028030 138 ---DSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEK 203 (215)
Q Consensus 138 ---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~ 203 (215)
+++.+++|+++++++|+++.|.+.++.+.|++.. +| ++||||++|+|+..+.|..+.+.
T Consensus 128 ~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~-----~P--t~~lID~~G~Iv~~~~G~~~~~~ 189 (352)
T 2hyx_A 128 FEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRY-----WP--AEYLIDATGTVRHIKFGEGDYNV 189 (352)
T ss_dssp GGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCE-----ES--EEEEECTTSBEEEEEESBCCHHH
T ss_pred ccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCc-----cC--EEEEEeCCCeEEEEEcCCCCHHH
Confidence 5789999999999999999999999999999987 88 99999999999999998654433
No 91
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.94 E-value=9e-26 Score=171.30 Aligned_cols=137 Identities=17% Similarity=0.288 Sum_probs=113.3
Q ss_pred CCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChh-hHHHHHHHHHHHHHHHH----cCcEEEEEeCC----CHHHHHHH
Q 028030 75 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPG-CTKQACAFRDSYEKFKK----AGAEVIGISGD----DSSSHKAF 145 (215)
Q Consensus 75 P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~-C~~~~~~l~~l~~~~~~----~~v~vv~vs~d----~~~~~~~~ 145 (215)
|+|++.|.+|+.+++++++||++||+|| ++||++ |+.+++.|+++++++++ .+++||+|+.| +++.+++|
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~ 85 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFG-FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARY 85 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEE-cCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHH
Confidence 8999999999999999999999999999 999998 99999999999999986 48999999987 57899999
Q ss_pred HHHcCCCeEEEEcCC---hhHHHHhCCCccC--------CCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHH
Q 028030 146 AKKYRLPYTLLSDEG---NKVRKEWGVPADF--------FGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 146 ~~~~~~~~~~~~d~~---~~~~~~~g~~~~~--------~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l 212 (215)
+++++++|+++.+.. .++.+.||+.... +...+.+++||||++|+|++.+.|..+.+...+.+.+++
T Consensus 86 ~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 86 VQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp HHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 999999999988643 4789999987521 001123389999999999999988655444444444443
No 92
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.94 E-value=1e-26 Score=175.80 Aligned_cols=134 Identities=20% Similarity=0.310 Sum_probs=118.2
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC--------
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-------- 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-------- 137 (215)
...++|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|.+++++++ +++|++|+.|
T Consensus 9 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~ 85 (165)
T 3ha9_A 9 HSEEVLEREASFSLTTIDGEVISLNNVGGDVVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKAL 85 (165)
T ss_dssp HHHHHHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHH
T ss_pred ccccccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccc
Confidence 3457899999999999999999999999999999999 9999999999999999999998 7999999987
Q ss_pred -----------CHHHHHHHHHHcCC-CeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccH
Q 028030 138 -----------DSSSHKAFAKKYRL-PYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHI 205 (215)
Q Consensus 138 -----------~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~ 205 (215)
+.+.+++|++++++ +|+++.| +.++.+.|++.. +| +++|||++|+|++ .|.......+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~-----~P--~~~lid~~G~i~~--~g~~~~~~~l 155 (165)
T 3ha9_A 86 GLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRS-----ID--YIVIMDKSSNVLY--AGTTPSLGEL 155 (165)
T ss_dssp TCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCS-----SS--EEEEEETTCCEEE--EEESCCHHHH
T ss_pred ccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCC-----ce--EEEEEcCCCcEEE--eCCCCCHHHH
Confidence 77999999999999 9999999 999999999987 88 9999999999998 4543233444
Q ss_pred HHHHHHH
Q 028030 206 DETLKFL 212 (215)
Q Consensus 206 ~~il~~l 212 (215)
++.++.+
T Consensus 156 ~~~l~~l 162 (165)
T 3ha9_A 156 ESVIKSV 162 (165)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 5555443
No 93
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.94 E-value=1.3e-25 Score=163.68 Aligned_cols=114 Identities=22% Similarity=0.391 Sum_probs=108.2
Q ss_pred CCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC-HHHHHHHHHHcC
Q 028030 72 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD-SSSHKAFAKKYR 150 (215)
Q Consensus 72 ~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~-~~~~~~~~~~~~ 150 (215)
.++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++++ ++.+++|+.|+ .+.+++|+++++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~ 78 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYN 78 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHT
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcC
Confidence 3679999999999999999999999999999 9999999999999999999997 79999999976 899999999999
Q ss_pred CCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEe
Q 028030 151 LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 151 ~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
++|+++.|.+..+.+.|++.. +| +++++|++|+|+ .+.
T Consensus 79 ~~~~~~~d~~~~~~~~~~i~~-----~P--~~~lid~~G~i~-~~~ 116 (136)
T 1lu4_A 79 LNFTNLNDADGVIWARYNVPW-----QP--AFVFYRADGTST-FVN 116 (136)
T ss_dssp CCSEEEECTTSHHHHHTTCCS-----SS--EEEEECTTSCEE-EEC
T ss_pred CCceEEECCchhHHHhcCCCC-----CC--EEEEECCCCcEE-EEE
Confidence 999999999999999999987 88 999999999999 887
No 94
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=6.1e-28 Score=181.51 Aligned_cols=140 Identities=24% Similarity=0.395 Sum_probs=121.2
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHH-HHHHHH-HcCcEEEEEeCCCH-HHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRD-SYEKFK-KAGAEVIGISGDDS-SSH 142 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~-l~~~~~-~~~v~vv~vs~d~~-~~~ 142 (215)
..+++|+++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|.+ ++++++ +.++++++|+.|+. +.+
T Consensus 5 ~~l~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~ 83 (159)
T 2ls5_A 5 YIVRIGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFT-ASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKV 83 (159)
Confidence 3568999999999999999999999999999999999 9999999999999998 999998 67899999999865 678
Q ss_pred HHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 143 KAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 143 ~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
++|.++++++|+++.|.++++.+.|++.. ..+| +++|||++|+|++.+.|. . ...++++++.|+
T Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~P--~~~lid~~G~i~~~~~g~-~-~~~l~~~l~~l~ 147 (159)
T 2ls5_A 84 LAFAKSTGVTYPLGLDPGADIFAKYALRD---AGIT--RNVLIDREGKIVKLTRLY-N-EEEFASLVQQIN 147 (159)
Confidence 99999999999999999999999999642 1278 999999999999988773 2 234555655544
No 95
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.93 E-value=4.5e-25 Score=160.33 Aligned_cols=118 Identities=20% Similarity=0.304 Sum_probs=109.1
Q ss_pred CCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEE------eCCCHHHHHHHH
Q 028030 73 APPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGI------SGDDSSSHKAFA 146 (215)
Q Consensus 73 ~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v------s~d~~~~~~~~~ 146 (215)
++|+|++.+.+|+.+++++++||++||+|| ++||++|+.+++.|++++++++ .++.+++| ..++.+.+++|+
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i~~~~~~~~~~~~~~~~~~ 78 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFW-ASWCSICLASLPDTDEIAKEAG-DDYVVLTVVSPGHKGEQSEADFKNWY 78 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEEC-CTTCHHHHHHHHHHHHHHHTCT-TTEEEEEEECTTSTTCCCHHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhC-CCcEEEEEEcCCCCchhhHHHHHHHH
Confidence 589999999999999999999999999999 9999999999999999999855 46999999 346779999999
Q ss_pred HHcCC-CeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 147 KKYRL-PYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 147 ~~~~~-~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+++++ +|+++.|.+..+.+.||+.. +| +++++|++|+|++.+.|..
T Consensus 79 ~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~ 125 (138)
T 4evm_A 79 KGLDYKNLPVLVDPSGKLLETYGVRS-----YP--TQAFIDKEGKLVKTHPGFM 125 (138)
T ss_dssp TTCCCTTCCEEECTTCHHHHHTTCCS-----SS--EEEEECTTCCEEEEEESCC
T ss_pred hhcCCCCeeEEECcchHHHHHcCccc-----CC--eEEEECCCCcEEEeecCCC
Confidence 99999 89999999999999999987 88 9999999999999999854
No 96
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.93 E-value=3.9e-25 Score=167.55 Aligned_cols=126 Identities=24% Similarity=0.447 Sum_probs=112.9
Q ss_pred cccCCCCCCCCCeEEeCC--CCCeeecCCc-CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC-CCHH
Q 028030 65 SAKVSKGQAPPSFTLKDQ--EGRNVSLSKF-KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG-DDSS 140 (215)
Q Consensus 65 ~~~~~~g~~~P~f~l~~~--~g~~~~l~~~-~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~-d~~~ 140 (215)
...+.+|+++|+|++.+. +|+.++++++ +||++||+|| ++||++|+.++|.|++++++ ++++++|+. ++.+
T Consensus 19 ~~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~ 93 (168)
T 2b1k_A 19 LESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQ 93 (168)
T ss_dssp CCCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHH
T ss_pred ccccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChH
Confidence 356789999999999999 9999999885 8999999999 99999999999999998765 799999996 4678
Q ss_pred HHHHHHHHcCCCeE-EEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCC
Q 028030 141 SHKAFAKKYRLPYT-LLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPE 202 (215)
Q Consensus 141 ~~~~~~~~~~~~~~-~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~ 202 (215)
.+++|+++++++|+ ++.|.+..+.+.||+.. +| ++|+||++|+|++.+.|..+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~~~~ 149 (168)
T 2b1k_A 94 KAISWLKELGNPYALSLFDGDGMLGLDLGVYG-----AP--ETFLIDGNGIIRYRHAGDLNPR 149 (168)
T ss_dssp HHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS-----SS--EEEEECTTSBEEEEEESCCCHH
T ss_pred HHHHHHHHcCCCCceeeECcchHHHHHcCccc-----cC--EEEEECCCCeEEEEEeCCCCHH
Confidence 89999999999988 56888999999999987 88 9999999999999998865443
No 97
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.93 E-value=1.1e-24 Score=166.43 Aligned_cols=130 Identities=19% Similarity=0.300 Sum_probs=105.1
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCCh-hhHHHHHHHHHHHHHHHHc--CcEEEEEeCC----CHHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETP-GCTKQACAFRDSYEKFKKA--GAEVIGISGD----DSSS 141 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~-~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d----~~~~ 141 (215)
.+|.++|+|+|+|.+|+++++++++||++||+|| .+||+ +|..+++.|.++++++++. ++++|+||+| +++.
T Consensus 7 P~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~ 85 (170)
T 4hde_A 7 PLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPEN 85 (170)
T ss_dssp CCCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHH
T ss_pred CCCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHH
Confidence 4788999999999999999999999999999999 99996 7999999999999999875 4889999974 6799
Q ss_pred HHHHHHHcCCC---eEEEEcCChh-H----HHHhCCCc---cCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 142 HKAFAKKYRLP---YTLLSDEGNK-V----RKEWGVPA---DFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 142 ~~~~~~~~~~~---~~~~~d~~~~-~----~~~~g~~~---~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+++|+++++.+ |..+.+...+ + ...|+... +.+...+++++||||++|+|+..+.|..
T Consensus 86 l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~ 154 (170)
T 4hde_A 86 LKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGIS 154 (170)
T ss_dssp HHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSS
T ss_pred HHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCC
Confidence 99999998864 6677654432 2 23344432 1233445569999999999999998743
No 98
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.93 E-value=2.6e-26 Score=174.34 Aligned_cols=138 Identities=25% Similarity=0.405 Sum_probs=116.4
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChh-hHHHHHHHHHHHHHHHHc---CcEEEEEeCC----CHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPG-CTKQACAFRDSYEKFKKA---GAEVIGISGD----DSS 140 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~-C~~~~~~l~~l~~~~~~~---~v~vv~vs~d----~~~ 140 (215)
.+|+++|+|++.|.+| .+++++++||++||+|| ++||++ |+.+++.|++++++++++ +++||+|+.| +++
T Consensus 11 ~~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~ 88 (172)
T 2k6v_A 11 LLNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFG-FTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPE 88 (172)
T ss_dssp EEEEEECCCEEECSSS-EEEGGGSTTSEEEEEEE-CTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHH
T ss_pred ccCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHH
Confidence 4688899999999999 99999999999999999 999997 999999999999999875 7999999975 578
Q ss_pred HHHHHHHHcCCCeEEEEcCC---hhHHHHhCCCcc--------CCC--CCCccEEEEEcCCCcEEEEEeCCCCCCccHHH
Q 028030 141 SHKAFAKKYRLPYTLLSDEG---NKVRKEWGVPAD--------FFG--SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDE 207 (215)
Q Consensus 141 ~~~~~~~~~~~~~~~~~d~~---~~~~~~~g~~~~--------~~g--~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~ 207 (215)
.+++|+++++.+|+++.|.. .++.+.||+... .++ .+| ++|||| +|+|++.+.|.. ....++
T Consensus 89 ~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P--~~~lid-~G~i~~~~~g~~--~~~~~~ 163 (172)
T 2k6v_A 89 VADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTA--TTFVVK-EGRLVLLYSPDK--AEATDR 163 (172)
T ss_dssp HHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECC--CEEEEE-TTEEEEEECHHH--HTCHHH
T ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCC--EEEEEE-CCEEEEEECCCC--CCCHHH
Confidence 99999999999999999987 688999998521 111 256 999999 999999998753 113455
Q ss_pred HHHHHh
Q 028030 208 TLKFLQ 213 (215)
Q Consensus 208 il~~l~ 213 (215)
+++.|+
T Consensus 164 l~~~l~ 169 (172)
T 2k6v_A 164 VVADLQ 169 (172)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 99
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.92 E-value=4e-25 Score=165.02 Aligned_cols=126 Identities=21% Similarity=0.429 Sum_probs=109.8
Q ss_pred ccCCCCCCCCCeEEeCCCC--------CeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 66 AKVSKGQAPPSFTLKDQEG--------RNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g--------~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
..+.+|+++|+|++++.+| +.+++++++||++||+|| ++||++|+.+++.|++++++ .++.+++|+.|
T Consensus 6 ~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~ 81 (156)
T 1kng_A 6 PSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVW-ASWCVPCHDEAPLLTELGKD---KRFQLVGINYK 81 (156)
T ss_dssp ------CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES
T ss_pred hhHHhCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEE-cccCHhHHHHHHHHHHHHhc---CCeEEEEEECC
Confidence 4568999999999999999 999999999999999999 99999999999999999876 35999999974
Q ss_pred -CHHHHHHHHHHcCCCeE-EEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCC
Q 028030 138 -DSSSHKAFAKKYRLPYT-LLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPE 202 (215)
Q Consensus 138 -~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~ 202 (215)
+.+.+++|+++++++|+ +..|....+.+.|++.. +| ++++||++|+|+..+.|..+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~~id~~G~i~~~~~g~~~~~ 141 (156)
T 1kng_A 82 DAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG-----VP--ETFVVGREGTIVYKLVGPITPD 141 (156)
T ss_dssp CCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS-----SC--EEEEECTTSBEEEEEESCCCHH
T ss_pred CCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc-----cC--eEEEEcCCCCEEEEEeCCCCHH
Confidence 67899999999999998 78899999999999987 88 9999999999999998865443
No 100
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.91 E-value=4.6e-25 Score=166.14 Aligned_cols=120 Identities=19% Similarity=0.322 Sum_probs=108.8
Q ss_pred CCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC------CHHHHH
Q 028030 70 KGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD------DSSSHK 143 (215)
Q Consensus 70 ~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d------~~~~~~ 143 (215)
+|+.+| ++.+.+|+.+++++++||++||+|| ++||++|+.++|.|++++++|+..+++||+|+.| +.+.++
T Consensus 16 ~~~~~p--~l~~~~g~~~~~~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~ 92 (164)
T 2h30_A 16 VPHTMS--TMKTADNRPASVYLKKDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQ 92 (164)
T ss_dssp HHHHHT--TCEETTSSBGGGGCCTTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHH
T ss_pred cCCcCC--ccCCCCCCEeeHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHH
Confidence 445555 7889999999999999999999999 9999999999999999999998889999999974 457889
Q ss_pred HHHHHcCCC-eEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 144 AFAKKYRLP-YTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 144 ~~~~~~~~~-~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+|+++++++ +++..|.+.++.+.|++.. +| ++++||++|+|++.+.|..
T Consensus 93 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~g~~ 142 (164)
T 2h30_A 93 KWYAGLNYPKLPVVTDNGGTIAQNLNISV-----YP--SWALIGKDGDVQRIVKGSI 142 (164)
T ss_dssp HHHTTSCCTTSCEEECTTCHHHHHTTCCS-----SS--EEEEECTTSCEEEEEESCC
T ss_pred HHHHhCCCCcceEEEcCchHHHHHcCCCc-----cc--eEEEECCCCcEEEEEcCCC
Confidence 999998998 8999999999999999987 89 9999999999999998854
No 101
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.91 E-value=1.8e-24 Score=159.80 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=106.8
Q ss_pred CCCCCCC-eEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH-cCcEEEEEeCC-CHHHHHHHH
Q 028030 70 KGQAPPS-FTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK-AGAEVIGISGD-DSSSHKAFA 146 (215)
Q Consensus 70 ~g~~~P~-f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d-~~~~~~~~~ 146 (215)
+|+.+|+ |++.+.+|+.+++++++||++||+|| ++||++|+.+++.|+++++++++ .+++|++|+.| +.+.+++|+
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFS-ASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYY 81 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHH
Confidence 5789999 99999999999999999999999999 99999999999999999999985 58999999998 578999999
Q ss_pred HHcCC-CeEEEE-cCChhHHHHhCCCccCCCCCCccEEEEEc-CCCcEEEEEeC
Q 028030 147 KKYRL-PYTLLS-DEGNKVRKEWGVPADFFGSLPGRQTYILD-KNGVVQLIYNN 197 (215)
Q Consensus 147 ~~~~~-~~~~~~-d~~~~~~~~~g~~~~~~g~~p~~~~~lid-~~G~v~~~~~g 197 (215)
+++++ .+++.. |....+.+.|++.. +| +++||| ++|+|+....+
T Consensus 82 ~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--~~~lid~~~G~i~~~~~~ 128 (144)
T 1i5g_A 82 AKMPWLALPFEDRKGMEFLTTGFDVKS-----IP--TLVGVEADSGNIITTQAR 128 (144)
T ss_dssp TTCSSEECCTTCHHHHHHHHHHTTCCS-----SS--EEEEEETTTCCEEESCHH
T ss_pred HhCCccccccCchHHHHHHHHHcCCCC-----CC--EEEEEECCCCcEEeccch
Confidence 99875 355544 55678999999987 89 999999 99999987643
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.90 E-value=1.2e-23 Score=155.89 Aligned_cols=120 Identities=21% Similarity=0.302 Sum_probs=105.8
Q ss_pred CCCCCCCC-eEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH-cCcEEEEEeCC-CHHHHHHH
Q 028030 69 SKGQAPPS-FTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK-AGAEVIGISGD-DSSSHKAF 145 (215)
Q Consensus 69 ~~g~~~P~-f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d-~~~~~~~~ 145 (215)
..|+.+|+ |++.+.+| .+++++++||++||+|| ++||++|+.+++.|+++++++++ .+++|++|+.| +.+.+++|
T Consensus 3 ~~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFS-ASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGY 80 (146)
T ss_dssp CGGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHH
T ss_pred chHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEE-ccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHH
Confidence 46789999 99999999 99999999999999999 99999999999999999999984 58999999998 56889999
Q ss_pred HHHcCC-CeEEEE-cCChhHHHHhCCCccCCCCCCccEEEEEc-CCCcEEEEEeC
Q 028030 146 AKKYRL-PYTLLS-DEGNKVRKEWGVPADFFGSLPGRQTYILD-KNGVVQLIYNN 197 (215)
Q Consensus 146 ~~~~~~-~~~~~~-d~~~~~~~~~g~~~~~~g~~p~~~~~lid-~~G~v~~~~~g 197 (215)
++++++ .+++.. |....+.+.|++.. +| ++++|| ++|+|+....+
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----~P--t~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 81 FAKMPWLAVPFAQSEAVQKLSKHFNVES-----IP--TLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp HTTCSSEECCGGGHHHHHHHHHHTTCCS-----SS--EEEEEETTTCCEEESCHH
T ss_pred HHHCCceeeccchhhHHHHHHHHhCCCC-----CC--EEEEEECCCCeEEEecch
Confidence 998875 355443 55678999999987 89 999999 99999987654
No 103
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.88 E-value=5.6e-24 Score=161.46 Aligned_cols=122 Identities=20% Similarity=0.268 Sum_probs=105.2
Q ss_pred cCCCCCCCCCe-EEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH-cCcEEEEEeCCCH-HHHH
Q 028030 67 KVSKGQAPPSF-TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK-AGAEVIGISGDDS-SSHK 143 (215)
Q Consensus 67 ~~~~g~~~P~f-~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d~~-~~~~ 143 (215)
...+|+++|+| ++.+.+| .+++++++||++||+|| ++||++|+.++|.|.+++++|++ .+++||+|+.|+. +.++
T Consensus 21 ~~~vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~ 98 (165)
T 3s9f_A 21 MSGVAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFN 98 (165)
T ss_dssp -CHHHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHH
T ss_pred hhhhcccCCcceeeecCCC-cccHHHcCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHH
Confidence 34588999999 9999999 99999999999999999 99999999999999999999986 5899999999764 7899
Q ss_pred HHHHHcCCC-eEEEEcC-ChhHHHHhCCCccCCCCCCccEEEEEcCC-CcEEEEEeC
Q 028030 144 AFAKKYRLP-YTLLSDE-GNKVRKEWGVPADFFGSLPGRQTYILDKN-GVVQLIYNN 197 (215)
Q Consensus 144 ~~~~~~~~~-~~~~~d~-~~~~~~~~g~~~~~~g~~p~~~~~lid~~-G~v~~~~~g 197 (215)
+|++++++. +++..+. ..++.+.|++.. +| +++|||++ |+|+....+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~-----~P--t~~lid~~~G~iv~~~~~ 148 (165)
T 3s9f_A 99 AYYAKMPWLSIPFANRNIVEALTKKYSVES-----IP--TLIGLNADTGDTVTTRAR 148 (165)
T ss_dssp HHHTTCSSEECCTTCHHHHHHHHHHTTCCS-----SS--EEEEEETTTCCEEESCHH
T ss_pred HHHHhCCCcccccCchhHHHHHHHHcCCCC-----CC--EEEEEeCCCCEEEecccH
Confidence 999987653 3433333 378999999987 89 99999998 999987543
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.88 E-value=4e-23 Score=152.31 Aligned_cols=120 Identities=24% Similarity=0.349 Sum_probs=104.1
Q ss_pred CCCCCCCCe-EEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHH-HcCcEEEEEeCCC-HHHHHHH
Q 028030 69 SKGQAPPSF-TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFK-KAGAEVIGISGDD-SSSHKAF 145 (215)
Q Consensus 69 ~~g~~~P~f-~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~-~~~v~vv~vs~d~-~~~~~~~ 145 (215)
.+|+.+|+| ++.+.+| .+++++++||++||+|| ++||++|+.+++.|++++++++ +.++++++|+.|+ .+.+++|
T Consensus 3 ~~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~ 80 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDY 80 (144)
T ss_dssp GGGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred chhhhCccceEeecCCC-cCcHHHhCCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 468899997 9999999 99999999999999999 9999999999999999999998 3589999999985 5788999
Q ss_pred HHHcCCC-eEEEE-cCChhHHHHhCCCccCCCCCCccEEEEEc-CCCcEEEEEeC
Q 028030 146 AKKYRLP-YTLLS-DEGNKVRKEWGVPADFFGSLPGRQTYILD-KNGVVQLIYNN 197 (215)
Q Consensus 146 ~~~~~~~-~~~~~-d~~~~~~~~~g~~~~~~g~~p~~~~~lid-~~G~v~~~~~g 197 (215)
++++++. +++.. |....+.+.|++.. +| +++++| ++|+|+....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~P--t~~lid~~~G~i~~~~~~ 128 (144)
T 1o73_A 81 YGKMPWLALPFDQRSTVSELGKTFGVES-----IP--TLITINADTGAIIGTQAR 128 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHHTCCS-----SS--EEEEEETTTCCEEESCHH
T ss_pred HHhCCceEeeccchhHHHHHHHHcCCCC-----CC--EEEEEECCCCeEEecchh
Confidence 9887642 34333 45678999999987 89 999999 89999987643
No 105
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.80 E-value=2.6e-24 Score=158.27 Aligned_cols=118 Identities=19% Similarity=0.311 Sum_probs=104.6
Q ss_pred CCCCCeEEeCCCCCeeecCC-cCCC-cEEEEEEcCCCChhhHHHHHHHHHHHHHHHH--cCcEEEEEeCC-CHHHHHHHH
Q 028030 72 QAPPSFTLKDQEGRNVSLSK-FKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKK--AGAEVIGISGD-DSSSHKAFA 146 (215)
Q Consensus 72 ~~~P~f~l~~~~g~~~~l~~-~~gk-~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~vs~d-~~~~~~~~~ 146 (215)
+.+|+|++.+.+|+.+++++ ++|| ++||+|| ++||++|+.+++.|+++++++++ .++.+++|+.| +++.+++|+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~ 80 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFS-AHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYM 80 (143)
Confidence 46899999999999999999 8999 9999999 99999999999999999999953 47999999997 457899999
Q ss_pred HHcCCCeEEE---EcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 147 KKYRLPYTLL---SDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 147 ~~~~~~~~~~---~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++++++|+.+ .|...++.+.|++.. +| ++++||++|+|++....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~P--~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 81 MESHGDWLAIPYRSGPASNVTAKYGITG-----IP--ALVIVKKDGTLISMNGR 127 (143)
Confidence 9999886643 466678999999987 88 99999999999988644
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.70 E-value=3.5e-17 Score=117.93 Aligned_cols=100 Identities=12% Similarity=0.175 Sum_probs=81.4
Q ss_pred CCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCC
Q 028030 72 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRL 151 (215)
Q Consensus 72 ~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~ 151 (215)
+.+++++..+.+|+.......+||++||+|| ++||++|+...+.+.+++++++ .++.++.|+.|
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~-------------- 67 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEEAKEGIPTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE-------------- 67 (126)
T ss_dssp CCSSCTTTTCCSEESSTTTCCSSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT--------------
T ss_pred cccCCCCccccchhHHHHHHhCCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC--------------
Confidence 3456666666676654455567899999999 9999999999999999999987 46999999954
Q ss_pred CeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 152 PYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 152 ~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
.|.+.++.+.|++.. +| +++++|++|+++..+.|..
T Consensus 68 -----~d~~~~~~~~~~v~~-----~P--t~~~~~~~G~~~~~~~G~~ 103 (126)
T 2l57_A 68 -----EEKNIDLAYKYDANI-----VP--TTVFLDKEGNKFYVHQGLM 103 (126)
T ss_dssp -----SSHHHHHHHHTTCCS-----SS--EEEEECTTCCEEEEEESCC
T ss_pred -----CCchHHHHHHcCCcc-----ee--EEEEECCCCCEEEEecCCC
Confidence 233456888899987 89 9999999999999998854
No 107
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.67 E-value=2.4e-17 Score=123.40 Aligned_cols=109 Identities=13% Similarity=0.156 Sum_probs=84.2
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeCCCHHHHHHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISGDDSSSHKAF 145 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~~ 145 (215)
..+...+++ +..|+.+++++.+||++||+||.++||++|+.+.|.| .++.+.+.. ++.++.|+.++..
T Consensus 25 ~~~~~~~~~---~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~----- 95 (154)
T 2ju5_A 25 PIAAANLQW---ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKN----- 95 (154)
T ss_dssp SSCCCCCCE---ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSC-----
T ss_pred hcccCCCCC---CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCcccc-----
Confidence 445555666 4456777888888999999999779999999999999 777655543 5999999886543
Q ss_pred HHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 146 AKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 146 ~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+++++ +.|.+.++.+.|++.. +| +++++|++|+++..+ |..
T Consensus 96 ----~~~~~-~~~~~~~l~~~~~v~~-----~P--t~~~~d~~G~~~~~~-G~~ 136 (154)
T 2ju5_A 96 ----HQPEE-QRQKNQELKAQYKVTG-----FP--ELVFIDAEGKQLARM-GFE 136 (154)
T ss_dssp ----CCCHH-HHHHHHHHHHHTTCCS-----SS--EEEEECTTCCEEEEE-CCC
T ss_pred ----CCChh-hHhhHHHHHHHcCCCC-----CC--EEEEEcCCCCEEEEe-cCC
Confidence 12322 1355678899999987 89 999999999999998 754
No 108
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.66 E-value=1.7e-17 Score=121.16 Aligned_cols=117 Identities=19% Similarity=0.241 Sum_probs=87.1
Q ss_pred CCCCCCCCCeE-EeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeCCCHHHHH
Q 028030 68 VSKGQAPPSFT-LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISGDDSSSHK 143 (215)
Q Consensus 68 ~~~g~~~P~f~-l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~ 143 (215)
...|...|+|. +.+.++....+++.+||++||+|| ++||++|+...+.+ .+++++++ ++.++.|+.++..
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~--- 77 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAND--- 77 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHHTTSCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCC---
T ss_pred ccccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCc---
Confidence 35678899998 666777667777778999999999 99999999999988 88888876 5999999886531
Q ss_pred HHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEE--EEEeCCCCCCccHHHHHHHH
Q 028030 144 AFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQ--LIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 144 ~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~--~~~~g~~~~~~~~~~il~~l 212 (215)
|...++.+.|++.. +| +++++|++|+++ ..+.|..+ .+.+.+.++.+
T Consensus 78 --------------~~~~~l~~~~~v~~-----~P--t~~~~d~~G~~v~~~~~~G~~~-~~~l~~~l~~~ 126 (134)
T 2fwh_A 78 --------------AQDVALLKHLNVLG-----LP--TILFFDGQGQEHPQARVTGFMD-AETFSAHLRDR 126 (134)
T ss_dssp --------------HHHHHHHHHTTCCS-----SS--EEEEECTTSCBCGGGCBCSCCC-HHHHHHHHHHC
T ss_pred --------------chHHHHHHHcCCCC-----CC--EEEEECCCCCEeeeeeeeeccC-HHHHHHHHHhc
Confidence 23456788899887 89 999999999998 67777543 33444454443
No 109
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.64 E-value=8.8e-16 Score=112.55 Aligned_cols=91 Identities=18% Similarity=0.354 Sum_probs=77.9
Q ss_pred EeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEc
Q 028030 79 LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSD 158 (215)
Q Consensus 79 l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d 158 (215)
+.+.+|....+++++||++||+|| ++||++|+...|.+.++++++++ .+.++.|..|.
T Consensus 36 l~~~~~~~~~l~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------------------- 93 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDK-------------------- 93 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTT--------------------
T ss_pred hhccccchhHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCC--------------------
Confidence 356778888999999999999999 99999999999999999999986 48998888643
Q ss_pred CChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 159 EGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 159 ~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+.++.+.|++.. +| +++++|++|+++ .+.|..+
T Consensus 94 -~~~~~~~~~v~~-----~P--t~~~~~~~g~~~-~~~G~~~ 126 (141)
T 3hxs_A 94 -EPELARDFGIQS-----IP--TIWFVPMKGEPQ-VNMGALS 126 (141)
T ss_dssp -CHHHHHHTTCCS-----SS--EEEEECSSSCCE-EEESCCC
T ss_pred -CHHHHHHcCCCC-----cC--EEEEEeCCCCEE-EEeCCCC
Confidence 456888899987 89 999999999997 6677543
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.63 E-value=3.6e-15 Score=107.78 Aligned_cols=108 Identities=16% Similarity=0.303 Sum_probs=82.6
Q ss_pred CCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHc
Q 028030 70 KGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKY 149 (215)
Q Consensus 70 ~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~ 149 (215)
...++|+++ +.+++.++....+||++||+|| ++||++|+...|.+.++++++++ ++.++.|+.|
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d------------ 83 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGVNMKNTVIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLD------------ 83 (128)
T ss_dssp ------CCC--CCCCSSSSBTTSCCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGG------------
T ss_pred HhccCCccc--cCCccHHHHHHccCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECC------------
Confidence 445666666 5566666777778999999999 99999999999999999999985 4899998753
Q ss_pred CCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 150 RLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 150 ~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
.+.++.+.|++.. +| +++++ ++|+++..+.|.. ..+++.+.|++
T Consensus 84 ---------~~~~l~~~~~v~~-----~P--t~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~ 127 (128)
T 3ul3_B 84 ---------KNESLARKFSVKS-----LP--TIILL-KNKTMLARKDHFV----SSNDLIALIKK 127 (128)
T ss_dssp ---------GCHHHHHHTTCCS-----SS--EEEEE-ETTEEEEEESSCC----CHHHHHHHHTT
T ss_pred ---------CCHHHHHHcCCCC-----cC--EEEEE-ECCEEEEEecCCC----CHHHHHHHHHh
Confidence 3457888999987 99 88888 7999999988843 34566666654
No 111
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.59 E-value=1.2e-14 Score=105.52 Aligned_cols=79 Identities=19% Similarity=0.315 Sum_probs=69.3
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHH--HHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFR--DSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~--~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
..||++||+|| ++||++|+...|.|. ++.+++++ ++.++.|+.++ .|...++.+.|++
T Consensus 27 ~~~k~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~------------------~~~~~~l~~~~~v 86 (133)
T 3fk8_A 27 RTHKPTLLVFG-ANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN------------------FDRNLELSQAYGD 86 (133)
T ss_dssp HHTCCEEEEEE-CTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT------------------TTSSHHHHHHTTC
T ss_pred hcCCcEEEEEc-CCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc------------------ccchHHHHHHhCC
Confidence 35899999999 999999999999999 99998876 49999998864 2556778888998
Q ss_pred ---CccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 170 ---PADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 170 ---~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
.. +| +++++|++|+++....|
T Consensus 87 ~~~~~-----~P--t~~~~d~~G~~~~~~~g 110 (133)
T 3fk8_A 87 PIQDG-----IP--AVVVVNSDGKVRYTTKG 110 (133)
T ss_dssp GGGGC-----SS--EEEEECTTSCEEEECCS
T ss_pred ccCCc-----cc--eEEEECCCCCEEEEecC
Confidence 76 89 99999999999999887
No 112
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.54 E-value=2.3e-13 Score=104.74 Aligned_cols=145 Identities=21% Similarity=0.322 Sum_probs=108.0
Q ss_pred cCCCCCCCCC--eEEe--C-----CC----C--CeeecCCc--CCCcEEEEEEcCCCChhhHH-HHHHHHHHHHHH-HHc
Q 028030 67 KVSKGQAPPS--FTLK--D-----QE----G--RNVSLSKF--KGKPVVVYFYPADETPGCTK-QACAFRDSYEKF-KKA 127 (215)
Q Consensus 67 ~~~~g~~~P~--f~l~--~-----~~----g--~~~~l~~~--~gk~~ll~f~~a~~C~~C~~-~~~~l~~l~~~~-~~~ 127 (215)
...+|+++|. +++. . .+ | +++++++. +||.+||+++|+.+.|.|.. ++|.+.+.++++ +.+
T Consensus 25 ~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~k 104 (199)
T 4h86_A 25 SDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEK 104 (199)
T ss_dssp CTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHS
T ss_pred HHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhc
Confidence 3458888884 4432 1 11 3 44677665 79999999999999999975 799999988875 677
Q ss_pred Cc-EEEEEeCCCHHHHHHHHHHcCC----CeEEEEcCChhHHHHhCCCccCCC-CC-CccEEEEEcCCCcEEEEEeCCCC
Q 028030 128 GA-EVIGISGDDSSSHKAFAKKYRL----PYTLLSDEGNKVRKEWGVPADFFG-SL-PGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 128 ~v-~vv~vs~d~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~g~~~~~~g-~~-p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
|+ +|+.|++||+..+++|.+..+. .+.++.|.++++.+++|+..+..+ .. -.|..+||| ||+|.+.+.-+..
T Consensus 105 Gvd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DGvV~~~~vE~~p 183 (199)
T 4h86_A 105 EVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NGIVTYAAKETNP 183 (199)
T ss_dssp CCCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TTEEEEEEECSST
T ss_pred CCcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CCEEEEEEEeCCC
Confidence 87 6888999999999999998765 488999999999999999643222 11 235778888 9999998764321
Q ss_pred ---C-CccHHHHHHHH
Q 028030 201 ---P-EKHIDETLKFL 212 (215)
Q Consensus 201 ---~-~~~~~~il~~l 212 (215)
. -...+.+|+.|
T Consensus 184 g~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 184 GTDVTVSSVESVLAHL 199 (199)
T ss_dssp TTCCSTTSHHHHHTTC
T ss_pred CCCCcccCHHHHHhcC
Confidence 1 14567777643
No 113
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.54 E-value=3.1e-14 Score=105.25 Aligned_cols=103 Identities=12% Similarity=0.192 Sum_probs=83.1
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKK 148 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~ 148 (215)
..|.++++..+.+.+++.+...-..+|++||+|| ++||++|+...|.|.+++++++++ +.++.|+.|
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~----------- 96 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDKLLQDDLPMVIDFW-APWCGPCRSFAPIFAETAAERAGK-VRFVKVNTE----------- 96 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT-----------
T ss_pred hcCCccccCCceecCHHHHHHHHhcCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECc-----------
Confidence 4567778888888888766543346899999999 999999999999999999998764 999999874
Q ss_pred cCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCC
Q 028030 149 YRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPE 202 (215)
Q Consensus 149 ~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~ 202 (215)
.+.++.+.|++.. +| +++++ ++|+++..+.|....+
T Consensus 97 ----------~~~~l~~~~~v~~-----~P--t~~~~-~~G~~~~~~~G~~~~~ 132 (148)
T 3p2a_A 97 ----------AEPALSTRFRIRS-----IP--TIMLY-RNGKMIDMLNGAVPKA 132 (148)
T ss_dssp ----------TCHHHHHHTTCCS-----SS--EEEEE-ETTEEEEEESSCCCHH
T ss_pred ----------CCHHHHHHCCCCc-----cC--EEEEE-ECCeEEEEEeCCCCHH
Confidence 3457788899987 89 77777 6999999998864433
No 114
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=2.8e-14 Score=102.96 Aligned_cols=86 Identities=16% Similarity=0.247 Sum_probs=69.4
Q ss_pred eecCCcCCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhH
Q 028030 87 VSLSKFKGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKV 163 (215)
Q Consensus 87 ~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~ 163 (215)
+.+++.+||++||+|| ++||++|+...+.+ .++.+.+.. ++.++.|..+. +....+
T Consensus 20 ~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------------------~~~~~~ 78 (130)
T 2kuc_A 20 LKRAEVEDKLLFVDCF-TTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEK-------------------GEGVEL 78 (130)
T ss_dssp HHHHHHHSSCEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSS-------------------TTHHHH
T ss_pred HHHHHhcCCeEEEEEE-CCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCC-------------------cchHHH
Confidence 4445557899999999 99999999999998 666655554 48888887764 345678
Q ss_pred HHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 164 RKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 164 ~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
.+.|++.. +| +++++|++|+++..+.|...
T Consensus 79 ~~~~~v~~-----~P--t~~~~d~~G~~~~~~~G~~~ 108 (130)
T 2kuc_A 79 RKKYGVHA-----YP--TLLFINSSGEVVYRLVGAED 108 (130)
T ss_dssp HHHTTCCS-----SC--EEEEECTTSCEEEEEESCCC
T ss_pred HHHcCCCC-----CC--EEEEECCCCcEEEEecCCCC
Confidence 88999987 89 99999999999999888543
No 115
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.52 E-value=7e-14 Score=97.97 Aligned_cols=86 Identities=19% Similarity=0.281 Sum_probs=68.7
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
..+|++||+|| |+||++|+...|.+.+++++++ ++.++.|..| ...++.+.|++..
T Consensus 18 ~~~k~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d---------------------~~~~l~~~~~V~~ 73 (105)
T 3zzx_A 18 AGNKLVVIDFY-ATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVD---------------------ECEDIAQDNQIAC 73 (105)
T ss_dssp TTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETT---------------------TCHHHHHHTTCCB
T ss_pred cCCCEEEEEEE-CCCCCCccCCCcchhhhhhccC--CeEEEEEecc---------------------cCHHHHHHcCCCe
Confidence 35789999999 9999999999999999998876 4778878753 4567888999998
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+| +++++ ++|+++.++.|. +.+++.+.|++
T Consensus 74 -----~P--T~~~~-~~G~~v~~~~G~-----~~~~l~~~i~k 103 (105)
T 3zzx_A 74 -----MP--TFLFM-KNGQKLDSLSGA-----NYDKLLELVEK 103 (105)
T ss_dssp -----SS--EEEEE-ETTEEEEEEESC-----CHHHHHHHHHH
T ss_pred -----ec--EEEEE-ECCEEEEEEeCc-----CHHHHHHHHHh
Confidence 99 65555 899999999883 23556666653
No 116
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.51 E-value=2.4e-13 Score=95.35 Aligned_cols=89 Identities=16% Similarity=0.224 Sum_probs=70.7
Q ss_pred CCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 90 SKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 90 ~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
.+.+||++||+|| ++||++|+...|.|.+++++++ ++.++.|+.++ .+.++.+.|++
T Consensus 20 ~~~~~~~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~--------------------~~~~~~~~~~v 76 (111)
T 2pu9_C 20 KAAGDKPVVLDMF-TQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ--------------------ENKTLAKELGI 76 (111)
T ss_dssp TTCTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--------------------TTHHHHHHHCC
T ss_pred HhcCCCEEEEEEE-CCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc--------------------chHHHHHHcCC
Confidence 3346899999999 9999999999999999998886 58999998763 35678889999
Q ss_pred CccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHH
Q 028030 170 PADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKF 211 (215)
Q Consensus 170 ~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~ 211 (215)
.. +| + ++++++|+++..+.|. . .+.+.+.++.
T Consensus 77 ~~-----~P--t-~~~~~~G~~~~~~~G~-~-~~~l~~~l~~ 108 (111)
T 2pu9_C 77 RV-----VP--T-FKILKENSVVGEVTGA-K-YDKLLEAIQA 108 (111)
T ss_dssp SB-----SS--E-EEEESSSSEEEEEESS-C-HHHHHHHHHH
T ss_pred Ce-----ee--E-EEEEeCCcEEEEEcCC-C-HHHHHHHHHH
Confidence 87 99 5 7778999999998885 2 3334444443
No 117
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.49 E-value=4.8e-14 Score=106.81 Aligned_cols=105 Identities=16% Similarity=0.151 Sum_probs=68.4
Q ss_pred eecCCcCCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeCCCHHHHHHHHH-HcCCC---eEEEEcC
Q 028030 87 VSLSKFKGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISGDDSSSHKAFAK-KYRLP---YTLLSDE 159 (215)
Q Consensus 87 ~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~-~~~~~---~~~~~d~ 159 (215)
+.+++.+||++||+|| ++||++|+...+.+ .++.+.+++ ++.++.|+.|+...+..... ..... +..+.|.
T Consensus 40 ~~~a~~~gk~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDK 117 (172)
T ss_dssp HHHHHHTTCCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHH
T ss_pred HHHHHHcCCeEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchhhhhhhhhhh
Confidence 4445567999999999 99999999864444 555555655 59999999876432100000 00000 0111111
Q ss_pred ChhH-HHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 160 GNKV-RKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 160 ~~~~-~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
.+.+ .+.|++.. +| +++++|++|+++..+.|...
T Consensus 118 ~~~~~~~~~~v~~-----~P--t~~lid~~G~~~~~~~G~~~ 152 (172)
T 3f9u_A 118 WSYLQRVKFGANA-----QP--FYVLIDNEGNPLNKSYAYDE 152 (172)
T ss_dssp HHHHHHHHHSCCC-----SS--EEEEECTTSCBSSCCBCSCC
T ss_pred hhHHHHHHcCCCC-----cc--eEEEECCCCCEEeeccCCCC
Confidence 1222 58899987 99 99999999999998888654
No 118
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.47 E-value=3.1e-13 Score=95.96 Aligned_cols=75 Identities=21% Similarity=0.189 Sum_probs=64.7
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
.+||++||+|| ++||++|+...|.|.++++++++ +.++.|+.| .+.++.+.|++..
T Consensus 29 ~~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d---------------------~~~~l~~~~~v~~ 84 (116)
T 3qfa_C 29 AGDKLVVVDFS-ATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVD---------------------DCQDVASECEVKS 84 (116)
T ss_dssp HTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETT---------------------TTHHHHHHTTCCS
T ss_pred cCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECC---------------------CCHHHHHHcCCcc
Confidence 36899999999 99999999999999999988864 899999874 3457888999987
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| +++++ ++|+++..+.|.
T Consensus 85 -----~P--t~~~~-~~G~~~~~~~G~ 103 (116)
T 3qfa_C 85 -----MP--TFQFF-KKGQKVGEFSGA 103 (116)
T ss_dssp -----SS--EEEEE-SSSSEEEEEESC
T ss_pred -----cc--EEEEE-eCCeEEEEEcCC
Confidence 99 76666 899999999885
No 119
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.46 E-value=2.1e-13 Score=96.05 Aligned_cols=76 Identities=17% Similarity=0.206 Sum_probs=67.0
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...+.+.++++++++ ++.++.|+.|. +.++.+.|++..
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v~~- 71 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE---------------------NQETAGKYGVMS- 71 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT---------------------CCSHHHHTTCCS-
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC---------------------CHHHHHHcCCCc-
Confidence 6899999999 99999999999999999999986 59999998753 457888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 72 ----~P--t~~~~-~~G~~~~~~~G~~ 91 (112)
T 2voc_A 72 ----IP--TLLVL-KDGEVVETSVGFK 91 (112)
T ss_dssp ----BS--EEEEE-ETTEEEEEEESCC
T ss_pred ----cc--EEEEE-eCCEEEEEEeCCC
Confidence 89 88888 8999999998854
No 120
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.46 E-value=4.1e-13 Score=97.89 Aligned_cols=76 Identities=16% Similarity=0.352 Sum_probs=64.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+...|.|.++++++++ ++.++.|+.|. +.++.+.|++..
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v~~- 92 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEK---------------------EQELAGAFGIRS- 92 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCC---------------------CHHHHHHcCCCC-
Confidence 4689999999 99999999999999999999875 49999998753 446788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++|++|+++ .+.|..
T Consensus 93 ----~P--t~~~~~~~G~~~-~~~G~~ 112 (136)
T 2l5l_A 93 ----IP--SILFIPMEGKPE-MAQGAM 112 (136)
T ss_dssp ----SC--EEEEECSSSCCE-EEESCC
T ss_pred ----CC--EEEEECCCCcEE-EEeCCC
Confidence 89 999999999998 566654
No 121
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.46 E-value=7.7e-13 Score=92.77 Aligned_cols=74 Identities=26% Similarity=0.275 Sum_probs=64.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+||++||+|| ++||++|+...|.+.+++++++ ++.++.|..| ...++.+.|++..
T Consensus 23 ~~k~vlv~f~-a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~---------------------~~~~l~~~~~v~~- 77 (109)
T 3f3q_A 23 QDKLVVVDFY-ATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVD---------------------ELGDVAQKNEVSA- 77 (109)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT---------------------TCHHHHHHTTCCS-
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECC---------------------CCHHHHHHcCCCc-
Confidence 5899999999 9999999999999999999886 4888888764 4567888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| ++++++ +|+++..+.|.
T Consensus 78 ----~P--t~~~~~-~G~~~~~~~G~ 96 (109)
T 3f3q_A 78 ----MP--TLLLFK-NGKEVAKVVGA 96 (109)
T ss_dssp ----SS--EEEEEE-TTEEEEEEESS
T ss_pred ----cC--EEEEEE-CCEEEEEEeCC
Confidence 99 888887 99999999885
No 122
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.46 E-value=4.4e-14 Score=102.96 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=68.0
Q ss_pred eEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEE
Q 028030 77 FTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLL 156 (215)
Q Consensus 77 f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 156 (215)
+.+.+.++-.-.+++.+||++||+|| ++||++|+...|.+.++.+++ ++.++.|..|.
T Consensus 23 ~~l~~~~~~~~~l~~~~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~------------------ 80 (133)
T 3cxg_A 23 IELKNTGSLNQVFSSTQNSSIVIKFG-AVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI------------------ 80 (133)
T ss_dssp EECCCTTHHHHHHTC-CCSEEEEEEE-CTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT------------------
T ss_pred EEecChhHHHHHHHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc------------------
Confidence 33444444333456667899999999 999999999999999887665 47888887543
Q ss_pred EcCChhHHHHhCCCccCCCCCCccEEEEE-cCCCc--EEEEEeCC
Q 028030 157 SDEGNKVRKEWGVPADFFGSLPGRQTYIL-DKNGV--VQLIYNNQ 198 (215)
Q Consensus 157 ~d~~~~~~~~~g~~~~~~g~~p~~~~~li-d~~G~--v~~~~~g~ 198 (215)
..++.+.|++.. +| +++++ |++|+ ++..+.|.
T Consensus 81 ---~~~l~~~~~v~~-----~P--t~~~~~~~~g~g~~~~~~~G~ 115 (133)
T 3cxg_A 81 ---HPKLNDQHNIKA-----LP--TFEFYFNLNNEWVLVHTVEGA 115 (133)
T ss_dssp ---CHHHHHHTTCCS-----SS--EEEEEEEETTEEEEEEEEESC
T ss_pred ---hHHHHHhcCCCC-----CC--EEEEEEecCCCeEEEEEEcCC
Confidence 457888999987 99 88887 45666 88888885
No 123
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.45 E-value=7.2e-13 Score=94.73 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=69.2
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
.+||+++|+|| ++||++|+...|.+.+++++++ ++.++.|..++ ++.++.+.|++..
T Consensus 35 ~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~--------------------~~~~~~~~~~v~~ 91 (124)
T 1faa_A 35 AGDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ--------------------ENKTLAKELGIRV 91 (124)
T ss_dssp TTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--------------------TTHHHHHHHCCSS
T ss_pred cCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc--------------------chHHHHHHcCCCe
Confidence 36899999999 9999999999999999998886 58999998753 2457888999987
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHH
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKF 211 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~ 211 (215)
+| + ++++++|+++..+.|.. .+.+.+.++.
T Consensus 92 -----~P--t-~~~~~~G~~~~~~~G~~--~~~l~~~i~~ 121 (124)
T 1faa_A 92 -----VP--T-FKILKENSVVGEVTGAK--YDKLLEAIQA 121 (124)
T ss_dssp -----SS--E-EEEEETTEEEEEEESSC--HHHHHHHHHH
T ss_pred -----ee--E-EEEEeCCcEEEEEcCCC--HHHHHHHHHH
Confidence 99 5 66678999999988852 3334444443
No 124
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.45 E-value=5.8e-13 Score=93.35 Aligned_cols=77 Identities=19% Similarity=0.326 Sum_probs=64.7
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...|.+.+++++++++ +.++.|+.|. +.++.+.|++..
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~---------------------~~~~~~~~~v~~- 77 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDE---------------------NPGTAAKYGVMS- 77 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCeEEEEEE-CCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCC---------------------CHHHHHhCCCCc-
Confidence 4789999999 999999999999999999998764 9999998754 456788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|..+
T Consensus 78 ----~P--t~~~~-~~G~~~~~~~G~~~ 98 (112)
T 1t00_A 78 ----IP--TLNVY-QGGEVAKTIVGAKP 98 (112)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCCC
T ss_pred ----cc--EEEEE-eCCEEEEEEeCCCC
Confidence 89 65555 89999999988643
No 125
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.45 E-value=2.1e-13 Score=101.40 Aligned_cols=74 Identities=19% Similarity=0.235 Sum_probs=63.0
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+.+.|.|.+++++++++ +.++.|+. |...++...|++..
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~---------------------d~~~~l~~~~~v~~- 77 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDV---------------------DQTAVYTQYFDISY- 77 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEET---------------------TTCCHHHHHTTCCS-
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHccCc-eEEEEEEC---------------------CcCHHHHHHcCCCc-
Confidence 4799999999 999999999999999999988754 88888876 34567888999987
Q ss_pred CCCCCCccEEEEEcCCCcEE---------EEEeC
Q 028030 173 FFGSLPGRQTYILDKNGVVQ---------LIYNN 197 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~---------~~~~g 197 (215)
+| +++ ++++|+++ ..+.|
T Consensus 78 ----~P--t~~-~~~~G~~v~~~~g~~~~~~~~G 104 (149)
T 3gix_A 78 ----IP--STV-FFFNGQHMKVDYGSPDHTKFVG 104 (149)
T ss_dssp ----SS--EEE-EEETTEEEEEECSSSCCSCEES
T ss_pred ----cC--eEE-EEECCeEEEeecCCCCCCeEee
Confidence 99 666 77899999 67777
No 126
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.44 E-value=2e-13 Score=97.29 Aligned_cols=108 Identities=19% Similarity=0.248 Sum_probs=75.8
Q ss_pred CCCCCCCCeEEeCCCCCeeecCCc--CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHH
Q 028030 69 SKGQAPPSFTLKDQEGRNVSLSKF--KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFA 146 (215)
Q Consensus 69 ~~g~~~P~f~l~~~~g~~~~l~~~--~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~ 146 (215)
..|...+.+.+.+.++-.-.+.+. .||++||+|| ++||++|+...|.|.++++++++ +.++.|+.|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~-------- 75 (122)
T 2vlu_A 7 AAAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFT-ASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE-------- 75 (122)
T ss_dssp -----CCCEEECSHHHHHHHHHHHHHTTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT--------
T ss_pred ccCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC--------
Confidence 355666777765544322222222 5899999999 99999999999999999988874 8999998754
Q ss_pred HHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHH
Q 028030 147 KKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLK 210 (215)
Q Consensus 147 ~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~ 210 (215)
+.++.+.|++.. +| ++++ .++|+++..+.|.. .+.+.+.++
T Consensus 76 -------------~~~~~~~~~v~~-----~P--t~~~-~~~G~~~~~~~G~~--~~~l~~~l~ 116 (122)
T 2vlu_A 76 -------------LKPIAEQFSVEA-----MP--TFLF-MKEGDVKDRVVGAI--KEELTAKVG 116 (122)
T ss_dssp -------------CHHHHHHTTCCS-----SS--EEEE-EETTEEEEEEESSC--HHHHHHHHH
T ss_pred -------------CHHHHHHcCCCc-----cc--EEEE-EeCCEEEEEEeCcC--HHHHHHHHH
Confidence 456788899987 99 6554 48999999998854 333444443
No 127
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.43 E-value=1.4e-13 Score=104.32 Aligned_cols=79 Identities=14% Similarity=0.081 Sum_probs=62.0
Q ss_pred ecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHh
Q 028030 88 SLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEW 167 (215)
Q Consensus 88 ~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (215)
.+.+++||++||+|| ++||++|+.++|.|.+++++++ ++.++.|+.|... ++...|
T Consensus 48 ~l~~~~~k~vvv~F~-A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~---------------------~~~~~~ 103 (167)
T 1z6n_A 48 RLQRIERRYRLLVAG-EMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAE---------------------DDLRQR 103 (167)
T ss_dssp HHHTCCSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHH---------------------HHTTTT
T ss_pred HHHHhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCH---------------------HHHHHH
Confidence 355678999999999 9999999999999999998775 5889988765432 222223
Q ss_pred ---CCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 168 ---GVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 168 ---g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++.. +| +++++|++|+++..+.+
T Consensus 104 ~~~~v~~-----iP--t~i~~~~~G~~~~~~g~ 129 (167)
T 1z6n_A 104 LALERIA-----IP--LVLVLDEEFNLLGRFVE 129 (167)
T ss_dssp TTCSSCC-----SS--EEEEECTTCCEEEEEES
T ss_pred HHcCCCC-----cC--eEEEECCCCCEEEEEcC
Confidence 3554 88 99999999999888754
No 128
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=7.3e-13 Score=95.60 Aligned_cols=80 Identities=15% Similarity=0.266 Sum_probs=66.8
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH---cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK---AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~---~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
.+|++||+|| ++||++|+...|.+.++++++++ .++.++.|+.+. +..+.+.|++
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---------------------~~~l~~~~~v 81 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV---------------------NQVLASRYGI 81 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT---------------------CCHHHHHHTC
T ss_pred CCCeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC---------------------CHHHHHhCCC
Confidence 4789999999 99999999999999999999983 358888887643 4578889999
Q ss_pred CccCCCCCCccEEEEEcCCCcEEEEEeCCCCCC
Q 028030 170 PADFFGSLPGRQTYILDKNGVVQLIYNNQFQPE 202 (215)
Q Consensus 170 ~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~ 202 (215)
.. +| +++++++ |+++..+.|..+.+
T Consensus 82 ~~-----~P--t~~~~~~-g~~~~~~~G~~~~~ 106 (133)
T 1x5d_A 82 RG-----FP--TIKIFQK-GESPVDYDGGRTRS 106 (133)
T ss_dssp CS-----SS--EEEEEET-TEEEEEECSCCSHH
T ss_pred Ce-----eC--eEEEEeC-CCceEEecCCCCHH
Confidence 87 99 9999986 88888888854433
No 129
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.43 E-value=1.2e-12 Score=90.95 Aligned_cols=76 Identities=20% Similarity=0.336 Sum_probs=64.4
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...|.+.+++++++++ +.++.|+.|. +.++.+.|++..
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~---------------------~~~~~~~~~v~~- 73 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDE---------------------SPNVASEYGIRS- 73 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT---------------------CHHHHHHHTCCS-
T ss_pred CCCcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCC---------------------CHHHHHHCCCCc-
Confidence 4789999999 999999999999999999988764 9999998753 456788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 74 ----~P--t~~~~-~~G~~~~~~~G~~ 93 (107)
T 1dby_A 74 ----IP--TIMVF-KGGKKCETIIGAV 93 (107)
T ss_dssp ----SC--EEEEE-SSSSEEEEEESCC
T ss_pred ----CC--EEEEE-eCCEEEEEEeCCC
Confidence 89 66555 8999999988854
No 130
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.43 E-value=1.1e-12 Score=93.36 Aligned_cols=76 Identities=24% Similarity=0.233 Sum_probs=65.4
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...+.|.++++++++ ++.++.|+.|. +.++.+.|++..
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~---------------------~~~l~~~~~v~~- 85 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD---------------------HTDLAIEYEVSA- 85 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT---------------------THHHHHHTTCCS-
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC---------------------CHHHHHHcCCCc-
Confidence 4789999999 99999999999999999998876 49999998753 456888899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 86 ----~P--t~~~~-~~G~~~~~~~G~~ 105 (119)
T 1w4v_A 86 ----VP--TVLAM-KNGDVVDKFVGIK 105 (119)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCC
T ss_pred ----cc--EEEEE-eCCcEEEEEcCCC
Confidence 89 88877 8999999888854
No 131
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.43 E-value=9.7e-13 Score=91.38 Aligned_cols=77 Identities=23% Similarity=0.300 Sum_probs=66.3
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+|+++||+|| ++||++|+...+.+.++++++++ .+.++.|..| ...++.+.|++..
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~---------------------~~~~~~~~~~i~~- 75 (109)
T 3tco_A 20 NNKLVLVDCW-AEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVD---------------------ENQKIADKYSVLN- 75 (109)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT---------------------TCHHHHHHTTCCS-
T ss_pred cCCeEEEEEE-CCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccc---------------------cCHHHHHhcCccc-
Confidence 5899999999 99999999999999999999886 4888888764 4456788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|..+
T Consensus 76 ----~P--t~~~~-~~g~~~~~~~g~~~ 96 (109)
T 3tco_A 76 ----IP--TTLIF-VNGQLVDSLVGAVD 96 (109)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCCC
T ss_pred ----CC--EEEEE-cCCcEEEeeeccCC
Confidence 89 88888 89999999988643
No 132
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.43 E-value=1.1e-12 Score=91.26 Aligned_cols=76 Identities=17% Similarity=0.308 Sum_probs=65.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|+++|+|| ++||++|+...|.+.++++++++ ++.++.|+.|. +.++.+.|++..
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v~~- 74 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ---------------------NPGTAPKYGIRG- 74 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT---------------------CTTHHHHTTCCS-
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCC---------------------CHHHHHHcCCcc-
Confidence 5789999999 99999999999999999998876 48888887643 346788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 75 ----~P--t~~~~-~~G~~~~~~~G~~ 94 (108)
T 2trx_A 75 ----IP--TLLLF-KNGEVAATKVGAL 94 (108)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCC
T ss_pred ----cC--EEEEE-eCCEEEEEEecCC
Confidence 89 88888 8999999988854
No 133
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.42 E-value=2.3e-12 Score=89.09 Aligned_cols=86 Identities=14% Similarity=0.217 Sum_probs=69.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
++|+++|+|| ++||++|+...+.+.+++++++++ +.++.|+.| .+..+.+.|++..
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~---------------------~~~~~~~~~~v~~- 73 (106)
T 3die_A 18 ESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVD---------------------ENPSTAAKYEVMS- 73 (106)
T ss_dssp CSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT---------------------TCHHHHHHTTCCS-
T ss_pred cCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECC---------------------cCHHHHHhCCCcc-
Confidence 6899999999 999999999999999999999865 999999874 3456778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+| ++++++ +|+++..+.|..+ .+++.+.|+
T Consensus 74 ----~P--t~~~~~-~G~~~~~~~g~~~----~~~l~~~l~ 103 (106)
T 3die_A 74 ----IP--TLIVFK-DGQPVDKVVGFQP----KENLAEVLD 103 (106)
T ss_dssp ----BS--EEEEEE-TTEEEEEEESCCC----HHHHHHHHH
T ss_pred ----cC--EEEEEe-CCeEEEEEeCCCC----HHHHHHHHH
Confidence 89 777775 9999999888532 344555544
No 134
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.42 E-value=5.1e-13 Score=92.47 Aligned_cols=76 Identities=18% Similarity=0.259 Sum_probs=65.3
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||+++|+|| ++||++|+...+.+.+++++++++ +.++.|+.|. +.++.+.|++..
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~---------------------~~~~~~~~~v~~- 71 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDE---------------------NPETTSQFGIMS- 71 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcC---------------------CHHHHHHcCCcc-
Confidence 5789999999 999999999999999999988764 8999998754 456778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 72 ----~P--t~~~~-~~G~~~~~~~G~~ 91 (105)
T 1nsw_A 72 ----IP--TLILF-KGGRPVKQLIGYQ 91 (105)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCC
T ss_pred ----cc--EEEEE-eCCeEEEEEecCC
Confidence 89 88888 8999999888854
No 135
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.42 E-value=7.6e-13 Score=95.09 Aligned_cols=94 Identities=24% Similarity=0.255 Sum_probs=70.9
Q ss_pred CCCCCeEEeCCCCCeeecCC--cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHc
Q 028030 72 QAPPSFTLKDQEGRNVSLSK--FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKY 149 (215)
Q Consensus 72 ~~~P~f~l~~~~g~~~~l~~--~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~ 149 (215)
...+-+.+.+.++-.-.+.+ .+||++||+|| ++||++|+...|.|.+++++++ ++.++.|+.|
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d------------ 78 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTD------------ 78 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETT------------
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECc------------
Confidence 33344555544332222222 35899999999 9999999999999999998886 6899999874
Q ss_pred CCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 150 RLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 150 ~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
.+.++.+.|++.. +| +++++ ++|+++..+.|
T Consensus 79 ---------~~~~l~~~~~v~~-----~P--t~~~~-~~G~~~~~~~G 109 (124)
T 1xfl_A 79 ---------ELKSVASDWAIQA-----MP--TFMFL-KEGKILDKVVG 109 (124)
T ss_dssp ---------TSHHHHHHTTCCS-----SS--EEEEE-ETTEEEEEEES
T ss_pred ---------cCHHHHHHcCCCc-----cC--EEEEE-ECCEEEEEEeC
Confidence 3457888999987 99 65554 89999999888
No 136
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.42 E-value=6.4e-13 Score=98.77 Aligned_cols=68 Identities=12% Similarity=0.085 Sum_probs=58.6
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
++++||+|| |+||++|+...|.|.+++++++++ +.|+-|.+ |+..+++..|++..
T Consensus 41 ~k~VVVdF~-A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDV---------------------De~~e~a~~y~V~s-- 95 (160)
T 2av4_A 41 ERLVCIRFG-HDYDPDCMKMDELLYKVADDIKNF-CVIYLVDI---------------------TEVPDFNTMYELYD-- 95 (160)
T ss_dssp SSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEET---------------------TTCCTTTTTTTCCS--
T ss_pred CCEEEEEEE-CCCChhHHHHHHHHHHHHHHccCC-cEEEEEEC---------------------CCCHHHHHHcCCCC--
Confidence 589999999 999999999999999999999754 78888876 56678899999997
Q ss_pred CCCCCccEEEEEcCCCcEE
Q 028030 174 FGSLPGRQTYILDKNGVVQ 192 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~v~ 192 (215)
+| +++++ ++|+.+
T Consensus 96 ---iP--T~~fF-k~G~~v 108 (160)
T 2av4_A 96 ---PV--SVMFF-YRNKHM 108 (160)
T ss_dssp ---SE--EEEEE-ETTEEE
T ss_pred ---CC--EEEEE-ECCEEE
Confidence 99 66666 688887
No 137
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.42 E-value=1.4e-12 Score=97.44 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=66.7
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.++++||+|| ++||++|+...|.|++++++++++ +.++.|+.| .+.++.+.|++..
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~---------------------~~~~l~~~~~i~~- 118 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQ---------------------AHPAVAGRHRIQG- 118 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETT---------------------TSTHHHHHTTCCS-
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCC---------------------ccHHHHHHcCCCc-
Confidence 5789999999 999999999999999999999864 999999875 3457888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|..+
T Consensus 119 ----~P--t~~~~-~~G~~~~~~~G~~~ 139 (155)
T 2ppt_A 119 ----IP--AFILF-HKGRELARAAGARP 139 (155)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCCC
T ss_pred ----CC--EEEEE-eCCeEEEEecCCCC
Confidence 99 77777 79999999988543
No 138
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.42 E-value=6.2e-13 Score=96.14 Aligned_cols=76 Identities=16% Similarity=0.263 Sum_probs=65.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+...|.+.+++++++++ +.++.|+.|+ +.++.+.|++..
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~---------------------~~~l~~~~~v~~- 94 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ---------------------NPGTAPKYGIRG- 94 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT---------------------CCTTSGGGTCCS-
T ss_pred cCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC---------------------CHHHHHHcCCCc-
Confidence 5799999999 999999999999999999998764 9999998753 346778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 95 ----~P--t~~~~-~~G~~~~~~~G~~ 114 (128)
T 2o8v_B 95 ----IP--TLLLF-KNGEVAATKVGAL 114 (128)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCC
T ss_pred ----cC--EEEEE-eCCEEEEEEcCCC
Confidence 89 88888 8999999988854
No 139
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.1e-12 Score=91.95 Aligned_cols=76 Identities=16% Similarity=0.322 Sum_probs=63.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+||+++|+|| ++||++|+...|.+.+++++++..++.++.|+.|. +.++.+.|++..
T Consensus 20 ~~~~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~---------------------~~~~~~~~~v~~- 76 (112)
T 3d6i_A 20 GDKLIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE---------------------NSEISELFEISA- 76 (112)
T ss_dssp TTCCEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc---------------------CHHHHHHcCCCc-
Confidence 4899999999 99999999999999999998755579999998764 346888899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| +++++ ++|+++..+.|.
T Consensus 77 ----~P--t~~~~-~~G~~~~~~~G~ 95 (112)
T 3d6i_A 77 ----VP--YFIII-HKGTILKELSGA 95 (112)
T ss_dssp ----SS--EEEEE-ETTEEEEEECSC
T ss_pred ----cc--EEEEE-ECCEEEEEecCC
Confidence 99 76666 799999998885
No 140
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.42 E-value=1.4e-12 Score=91.35 Aligned_cols=74 Identities=23% Similarity=0.231 Sum_probs=63.6
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
||++||+|| ++||++|+...+.|.++++++++ ++.++.|+.|. +.++.+.|++..
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v~~-- 78 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA---------------------VAAVAEAAGITA-- 78 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT---------------------THHHHHHHTCCB--
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc---------------------hHHHHHHcCCCc--
Confidence 899999999 99999999999999999999876 59999998743 456788899987
Q ss_pred CCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 174 FGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| +++ +.++|+++..+.|.
T Consensus 79 ---~P--t~~-~~~~G~~~~~~~G~ 97 (112)
T 1ep7_A 79 ---MP--TFH-VYKDGVKADDLVGA 97 (112)
T ss_dssp ---SS--EEE-EEETTEEEEEEESC
T ss_pred ---cc--EEE-EEECCeEEEEEcCC
Confidence 89 644 45899999998885
No 141
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.41 E-value=1.7e-12 Score=91.15 Aligned_cols=77 Identities=17% Similarity=0.265 Sum_probs=66.3
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.|+++||.|| ++||++|+...+.+.+++++++++ +.++.|+.|. +..+.+.|++..
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~---------------------~~~~~~~~~v~~- 79 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP---------------------NPTTVKKYKVEG- 79 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT---------------------CHHHHHHTTCCS-
T ss_pred CCceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC---------------------CHHHHHHcCCCc-
Confidence 5799999999 999999999999999999998864 9999998754 346788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|..+
T Consensus 80 ----~P--t~~~~-~~G~~~~~~~g~~~ 100 (115)
T 1thx_A 80 ----VP--ALRLV-KGEQILDSTEGVIS 100 (115)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCCC
T ss_pred ----ee--EEEEE-cCCEEEEEecCCCC
Confidence 89 88888 89999998888543
No 142
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.41 E-value=4.8e-13 Score=96.34 Aligned_cols=91 Identities=20% Similarity=0.284 Sum_probs=72.1
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+...|.+.++++++++. +.++.|+.| .+.++.+.|++..
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~---------------------~~~~l~~~~~v~~- 89 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQRLTPEWKKAATALKDV-VKVGAVNAD---------------------KHQSLGGQYGVQG- 89 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETT---------------------TCHHHHHHHTCCS-
T ss_pred CCCeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCC---------------------CCHHHHHHcCCCc-
Confidence 4789999999 999999999999999999998764 888888763 4567888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+| ++++++++|+++..+.|....+...+.+.+.++
T Consensus 90 ----~P--t~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 90 ----FP--TIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp ----SS--EEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred ----cC--EEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 89 999999999866777775444444444444443
No 143
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.40 E-value=2.4e-12 Score=89.83 Aligned_cols=77 Identities=14% Similarity=0.260 Sum_probs=65.7
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.++++||.|| ++||++|+...+.+.++++++++ ++.++.|+.| .+..+.+.|++..
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~---------------------~~~~l~~~~~v~~- 76 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVE---------------------EEKTLFQRFSLKG- 76 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT---------------------TCHHHHHHTTCCS-
T ss_pred cCCEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECC---------------------cChhHHHhcCCCc-
Confidence 4789999999 99999999999999999999886 4999999874 3447788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|..+
T Consensus 77 ----~P--t~~~~-~~g~~~~~~~g~~~ 97 (111)
T 3gnj_A 77 ----VP--QILYF-KDGEYKGKMAGDVE 97 (111)
T ss_dssp ----SC--EEEEE-ETTEEEEEEESSCC
T ss_pred ----CC--EEEEE-ECCEEEEEEeccCC
Confidence 89 88888 79999988888643
No 144
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.40 E-value=4.4e-12 Score=87.80 Aligned_cols=76 Identities=18% Similarity=0.255 Sum_probs=65.8
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.++++||.|| ++||++|+...+.+.++++++++ ++.++.|+.|+ +.++.+.|++..
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v~~- 74 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD---------------------NPETPNAYQVRS- 74 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT---------------------CCHHHHHTTCCS-
T ss_pred CCCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC---------------------CHHHHHhcCCCc-
Confidence 5789999999 99999999999999999999986 59999998653 346788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 75 ----~P--t~~~~-~~G~~~~~~~G~~ 94 (107)
T 2i4a_A 75 ----IP--TLMLV-RDGKVIDKKVGAL 94 (107)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCC
T ss_pred ----cC--EEEEE-eCCEEEEEecCCC
Confidence 89 88888 8999999888853
No 145
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.40 E-value=7.6e-13 Score=91.96 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=56.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|+++|+|| ++||++|+...|.+.+++++++ ++.++.|+.| .+.++...|++..
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~---------------------~~~~l~~~~~v~~- 71 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDVMLRKVNYVLENYN--YVEKIEILLQ---------------------DMQEIAGRYAVFT- 71 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEEC---------------------CC---------CC-
T ss_pred cCCCEEEEEe-CCCCcchHHHHHHHHHHHHHcC--CceEEEEECC---------------------CCHHHHHhcCCCC-
Confidence 5799999999 9999999999999999999884 5888888754 3446778889987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 72 ----~P--t~~~~-~~G~~~~~~~g~~ 91 (105)
T 4euy_A 72 ----GP--TVLLF-YNGKEILRESRFI 91 (105)
T ss_dssp ----CC--EEEEE-ETTEEEEEEESSC
T ss_pred ----CC--EEEEE-eCCeEEEEEeCCc
Confidence 89 88888 5999999988854
No 146
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.39 E-value=1.9e-12 Score=94.41 Aligned_cols=80 Identities=20% Similarity=0.216 Sum_probs=66.8
Q ss_pred eecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 028030 87 VSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKE 166 (215)
Q Consensus 87 ~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 166 (215)
+..++.+||++||+|| ++||++|+...|.+.+++++++ ++.++.|+.| .+.++.+.
T Consensus 39 ~~~~~~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~---------------------~~~~~~~~ 94 (139)
T 3d22_A 39 LSEASRDGKIVLANFS-ARWCGPSRQIAPYYIELSENYP--SLMFLVIDVD---------------------ELSDFSAS 94 (139)
T ss_dssp HHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT---------------------TSHHHHHH
T ss_pred HHHHhhcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCc---------------------ccHHHHHH
Confidence 3333456899999999 9999999999999999998884 6999999875 34568888
Q ss_pred hCCCccCCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 167 WGVPADFFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 167 ~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
|++.. +| +++++ ++|+++..+.|.
T Consensus 95 ~~v~~-----~P--t~~~~-~~G~~~~~~~G~ 118 (139)
T 3d22_A 95 WEIKA-----TP--TFFFL-RDGQQVDKLVGA 118 (139)
T ss_dssp TTCCE-----ES--EEEEE-ETTEEEEEEESC
T ss_pred cCCCc-----cc--EEEEE-cCCeEEEEEeCC
Confidence 99987 89 66666 899999999885
No 147
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.39 E-value=2.5e-12 Score=95.67 Aligned_cols=74 Identities=12% Similarity=0.249 Sum_probs=64.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+||++||+|| ++||++|+...|.+.+++++++ ++.++.|+.|. +..+.+.|++..
T Consensus 31 ~~~~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~---------------------~~~l~~~~~v~~- 85 (153)
T 2wz9_A 31 AKSLLVVHFW-APWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG---------------------VPEVSEKYEISS- 85 (153)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------SHHHHHHTTCCS-
T ss_pred CCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC---------------------CHHHHHHcCCCC-
Confidence 4899999999 9999999999999999998874 69999998754 446888899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| ++++++ +|+++..+.|.
T Consensus 86 ----~P--t~~~~~-~G~~~~~~~G~ 104 (153)
T 2wz9_A 86 ----VP--TFLFFK-NSQKIDRLDGA 104 (153)
T ss_dssp ----SS--EEEEEE-TTEEEEEEESS
T ss_pred ----CC--EEEEEE-CCEEEEEEeCC
Confidence 99 999998 99999988884
No 148
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.39 E-value=7.2e-13 Score=97.13 Aligned_cols=78 Identities=23% Similarity=0.306 Sum_probs=65.8
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+...|.+.+++++++++ +.++.|..| .+.++.+.|++..
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~---------------------~~~~l~~~~~v~~- 78 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIA---------------------TNPWTAEKYGVQG- 78 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETT---------------------TCHHHHHHHTCCE-
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECC---------------------cCHhHHHHCCCCc-
Confidence 4799999999 999999999999999999999864 999999864 3446778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQP 201 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~ 201 (215)
+| +++++ ++|+++..+.|....
T Consensus 79 ----~P--t~~~~-~~G~~~~~~~G~~~~ 100 (140)
T 3hz4_A 79 ----TP--TFKFF-CHGRPVWEQVGQIYP 100 (140)
T ss_dssp ----ES--EEEEE-ETTEEEEEEESSCCH
T ss_pred ----CC--EEEEE-eCCcEEEEEcCCCCH
Confidence 89 66666 899999999886443
No 149
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.39 E-value=7.6e-13 Score=95.68 Aligned_cols=91 Identities=14% Similarity=0.244 Sum_probs=66.5
Q ss_pred EEeCCCCCeeecCCc-CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc-CcEEEEEeCCCHHHHHHHHHHcCCCeEE
Q 028030 78 TLKDQEGRNVSLSKF-KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKA-GAEVIGISGDDSSSHKAFAKKYRLPYTL 155 (215)
Q Consensus 78 ~l~~~~g~~~~l~~~-~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~ 155 (215)
.+.+++++.+...-. .+|++||+|| ++||++|+...|.|.++++++++. ++.++.|..+.
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~----------------- 69 (133)
T 2dj3_A 8 PVKVVVGKTFDAIVMDPKKDVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA----------------- 69 (133)
T ss_dssp SSEECCTTTCCCCCTCTTSEEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT-----------------
T ss_pred ceEEEcCCCHHHHhccCCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc-----------------
Confidence 344455554443322 4899999999 999999999999999999999853 58888887643
Q ss_pred EEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEE-EEeC
Q 028030 156 LSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQL-IYNN 197 (215)
Q Consensus 156 ~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~-~~~g 197 (215)
+..+...|++.. +| ++++++++|++.. .+.|
T Consensus 70 ----~~~~~~~~~v~~-----~P--t~~~~~~g~~~~~~~~~g 101 (133)
T 2dj3_A 70 ----NDITNDQYKVEG-----FP--TIYFAPSGDKKNPIKFEG 101 (133)
T ss_dssp ----SCCCCSSCCCSS-----SS--EEEEECTTCTTSCEECCS
T ss_pred ----CHHHHhhcCCCc-----CC--EEEEEeCCCcccceEecC
Confidence 234556788887 89 9999988776543 3553
No 150
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.39 E-value=2e-12 Score=92.34 Aligned_cols=76 Identities=20% Similarity=0.234 Sum_probs=65.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+||++||+|| ++||++|+...+.|.+++++++++++.++.|+.|. +.++.+.|++..
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~---------------------~~~~~~~~~v~~- 88 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE---------------------QSQIAQEVGIRA- 88 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT---------------------CHHHHHHHTCCS-
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC---------------------CHHHHHHcCCCc-
Confidence 5789999999 99999999999999999999987679999998754 456788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| +++++ ++|+++..+.|.
T Consensus 89 ----~P--t~~~~-~~G~~~~~~~G~ 107 (121)
T 2j23_A 89 ----MP--TFVFF-KNGQKIDTVVGA 107 (121)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESS
T ss_pred ----cc--EEEEE-ECCeEEeeEcCC
Confidence 99 77666 699999998885
No 151
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.38 E-value=1.7e-12 Score=91.90 Aligned_cols=84 Identities=17% Similarity=0.200 Sum_probs=67.5
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+||++||+|| ++||++|+...|.|.++++++++ +.++.|+.|. +.++.+.|++..
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~---------------------~~~l~~~~~v~~- 83 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE---------------------SPDIAKECEVTA- 83 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC---------------------CHHHHHHCCCCc-
Confidence 5799999999 99999999999999999988874 8999998653 346788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+| ++++ .++|+++..+.|.. .+++.+.|+
T Consensus 84 ----~P--t~~~-~~~G~~~~~~~G~~-----~~~l~~~l~ 112 (114)
T 2oe3_A 84 ----MP--TFVL-GKDGQLIGKIIGAN-----PTALEKGIK 112 (114)
T ss_dssp ----BS--EEEE-EETTEEEEEEESSC-----HHHHHHHHH
T ss_pred ----cc--EEEE-EeCCeEEEEEeCCC-----HHHHHHHHH
Confidence 99 6554 58999999998853 344555554
No 152
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.38 E-value=5.2e-14 Score=106.30 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=67.6
Q ss_pred CeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEE
Q 028030 76 SFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTL 155 (215)
Q Consensus 76 ~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~ 155 (215)
++...+.+ +.+.....+||++||+|| ++||++|+...|.|.++.+.++. ++.|+.|++|....
T Consensus 29 ~i~w~~~~-~~~~~~~~~~k~vlv~F~-a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~~~-------------- 91 (164)
T 1sen_A 29 HIHWRTLE-DGKKEAAASGLPLMVIIH-KSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDEEE-------------- 91 (164)
T ss_dssp TSCBCCHH-HHHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGGGS--------------
T ss_pred cccccCHH-HHHHHHHhcCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCCch--------------
Confidence 44444444 445555567999999999 99999999999999998766554 47777777643321
Q ss_pred EEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 156 LSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 156 ~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
.+...|++.. ..+| +++++|++|+++..+.|.
T Consensus 92 ------~~~~~~~~~~---~~~P--t~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 92 ------PKDEDFSPDG---GYIP--RILFLDPSGKVHPEIINE 123 (164)
T ss_dssp ------CSCGGGCTTC---SCSS--EEEEECTTSCBCTTCCCT
T ss_pred ------HHHHHhcccC---CcCC--eEEEECCCCCEEEEEeCC
Confidence 1334555521 1278 999999999999877774
No 153
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.38 E-value=3.1e-12 Score=87.84 Aligned_cols=76 Identities=18% Similarity=0.254 Sum_probs=64.8
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+||+++|.|| ++||++|+...+.+.++++++++ +.++.|+.|. +.++.+.|++..
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~---------------------~~~~~~~~~v~~- 69 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE---------------------NPDIAARYGVMS- 69 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred cCCcEEEEEE-CCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC---------------------CHHHHHhCCccc-
Confidence 5789999999 99999999999999999988874 8999998743 456788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|..+
T Consensus 70 ----~P--t~~~~-~~g~~~~~~~g~~~ 90 (104)
T 2e0q_A 70 ----LP--TVIFF-KDGEPVDEIIGAVP 90 (104)
T ss_dssp ----SC--EEEEE-ETTEEEEEEESCCC
T ss_pred ----cC--EEEEE-ECCeEhhhccCCCC
Confidence 89 88877 89999998888543
No 154
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.38 E-value=1.9e-12 Score=89.77 Aligned_cols=76 Identities=17% Similarity=0.246 Sum_probs=65.3
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|+++|.|| ++||++|+...+.+.++.+++++ ++.++.|+.|. +.++.+.|++..
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v~~- 72 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE---------------------NPKTAMRYRVMS- 72 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC---------------------CHhHHHhCCCCc-
Confidence 4789999999 99999999999999999998875 49999998754 346788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 73 ----~P--t~~~~-~~g~~~~~~~g~~ 92 (109)
T 2yzu_A 73 ----IP--TVILF-KDGQPVEVLVGAQ 92 (109)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCC
T ss_pred ----CC--EEEEE-eCCcEeeeEeCCC
Confidence 89 88888 8999999888854
No 155
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.38 E-value=1e-12 Score=95.83 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=68.0
Q ss_pred eCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcC--cEEEEEeCCCHHHHHHHHHHcCCCeEEEE
Q 028030 80 KDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAG--AEVIGISGDDSSSHKAFAKKYRLPYTLLS 157 (215)
Q Consensus 80 ~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 157 (215)
.+++++.+...-..+|++||+|| ++||++|+...+.|.++++++++++ +.++.|..+
T Consensus 20 ~~l~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-------------------- 78 (140)
T 2dj1_A 20 WVLNDGNFDNFVADKDTVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT-------------------- 78 (140)
T ss_dssp EECCTTTHHHHHTTCSEEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT--------------------
T ss_pred EEcChHhHHHHHhcCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc--------------------
Confidence 34455444322125799999999 9999999999999999999998763 777777654
Q ss_pred cCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 158 DEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 158 d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
.+..+.+.|++.. +| +++++ ++|+ +..+.|..+
T Consensus 79 -~~~~~~~~~~v~~-----~P--t~~~~-~~G~-~~~~~g~~~ 111 (140)
T 2dj1_A 79 -SASMLASKFDVSG-----YP--TIKIL-KKGQ-AVDYDGSRT 111 (140)
T ss_dssp -TCHHHHHHTTCCS-----SS--EEEEE-ETTE-EEECCSCCC
T ss_pred -ccHHHHHHCCCCc-----cC--eEEEE-ECCc-EEEcCCCCC
Confidence 3457888999987 89 88888 7898 556666443
No 156
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.38 E-value=3.1e-12 Score=92.12 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=62.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+...|.|.+++++++ ++.++.|+.|. +.++.+.|++..
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~---------------------~~~l~~~~~v~~- 90 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN---------------------NSEIVSKCRVLQ- 90 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC---------------------CHHHHHHcCCCc-
Confidence 6899999999 9999999999999999999884 59999998753 456888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
+| +++++ ++|+++..+.|
T Consensus 91 ----~P--t~~i~-~~G~~~~~~~G 108 (125)
T 1r26_A 91 ----LP--TFIIA-RSGKMLGHVIG 108 (125)
T ss_dssp ----SS--EEEEE-ETTEEEEEEES
T ss_pred ----cc--EEEEE-eCCeEEEEEeC
Confidence 99 65554 89999999888
No 157
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.38 E-value=4.5e-12 Score=88.18 Aligned_cols=74 Identities=19% Similarity=0.204 Sum_probs=63.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
++|++||+|| ++||++|+...|.+.+++++++ ++.++.|+.|. +.++.+.|++..
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~---------------------~~~~~~~~~v~~- 74 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQ---------------------CQGTAATNNISA- 74 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------SHHHHHHTTCCS-
T ss_pred CCCEEEEEEE-CCCChhhHHHHHHHHHHHHHCC--CcEEEEEECcc---------------------CHHHHHhcCCCc-
Confidence 5799999999 9999999999999999999884 59999998753 346778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| +++++ ++|+++..+.|.
T Consensus 75 ----~P--t~~~~-~~G~~~~~~~G~ 93 (107)
T 1gh2_A 75 ----TP--TFQFF-RNKVRIDQYQGA 93 (107)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESS
T ss_pred ----cc--EEEEE-ECCeEEEEEeCC
Confidence 99 77766 799999988883
No 158
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.38 E-value=1.6e-12 Score=89.79 Aligned_cols=76 Identities=17% Similarity=0.291 Sum_probs=63.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|+++|.|| ++||++|+...+.+.+++++++++ +.++.|+.|+ +.++.+.|++..
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~---------------------~~~~~~~~~v~~- 72 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDE---------------------APGIATQYNIRS- 72 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcc---------------------hHHHHHhCCCCc-
Confidence 4789999999 999999999999999999988764 8888888653 346788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++..+.|..
T Consensus 73 ----~P--t~~~~-~~g~~~~~~~G~~ 92 (105)
T 1fb6_A 73 ----IP--TVLFF-KNGERKESIIGAV 92 (105)
T ss_dssp ----SS--EEEEE-ETTEEEEEEEECC
T ss_pred ----cc--EEEEE-eCCeEEEEEecCC
Confidence 89 65555 7999999888854
No 159
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.38 E-value=4.7e-12 Score=87.44 Aligned_cols=75 Identities=23% Similarity=0.227 Sum_probs=64.5
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
.+||+++|.|| ++||++|+...+.+.+++++++ ++.++.|+.| ...++.+.|++..
T Consensus 18 ~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~---------------------~~~~~~~~~~v~~ 73 (105)
T 3m9j_A 18 AGDKLVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVD---------------------DCQDVASESEVKS 73 (105)
T ss_dssp TTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETT---------------------TCHHHHHHTTCCB
T ss_pred cCCCeEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhh---------------------hhHHHHHHcCCCc
Confidence 36899999999 9999999999999999999886 4899999864 3456788899987
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| +++++ ++|+++..+.|.
T Consensus 74 -----~P--t~~~~-~~g~~~~~~~g~ 92 (105)
T 3m9j_A 74 -----MP--TFQFF-KKGQKVGEFSGA 92 (105)
T ss_dssp -----SS--EEEEE-ETTEEEEEEESS
T ss_pred -----Cc--EEEEE-ECCeEEEEEeCC
Confidence 89 88888 799999998885
No 160
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.5e-12 Score=93.36 Aligned_cols=72 Identities=18% Similarity=0.262 Sum_probs=60.9
Q ss_pred cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCC
Q 028030 96 PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFG 175 (215)
Q Consensus 96 ~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g 175 (215)
.+||+|| ++||++|+...|.+.++++++++.++.++.|..|. +..+.+.|++..
T Consensus 24 ~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~~~~~~~v~~---- 77 (126)
T 1x5e_A 24 DWMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE---------------------QPGLSGRFIINA---- 77 (126)
T ss_dssp EEEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT---------------------CHHHHHHTTCCS----
T ss_pred CEEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC---------------------CHHHHHHcCCcc----
Confidence 4899999 99999999999999999999987679999998653 345888899987
Q ss_pred CCCccEEEEEcCCCcEEEEEeCC
Q 028030 176 SLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 176 ~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| +++++ ++|++ ..+.|.
T Consensus 78 -~P--t~~~~-~~G~~-~~~~G~ 95 (126)
T 1x5e_A 78 -LP--TIYHC-KDGEF-RRYQGP 95 (126)
T ss_dssp -SS--EEEEE-ETTEE-EECCSC
T ss_pred -cC--EEEEE-eCCeE-EEeecC
Confidence 89 88888 89996 566664
No 161
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.08 E-value=4e-14 Score=102.20 Aligned_cols=92 Identities=20% Similarity=0.285 Sum_probs=72.8
Q ss_pred CCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCC
Q 028030 84 GRNVSLSKFKGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEG 160 (215)
Q Consensus 84 g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~ 160 (215)
.+.+.+....||++||+|| ++||++|+...|.+ .++.+.+++ ++.++.|+.|+. ..
T Consensus 9 ~~~~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-------------------~~ 67 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP-------------------EG 67 (130)
Confidence 5566777778999999999 99999999999999 888877765 488888877542 23
Q ss_pred hhHHHHhCCCccCCCCCCccEEEEEcC-CCcE--EEEEeCCCCCCc
Q 028030 161 NKVRKEWGVPADFFGSLPGRQTYILDK-NGVV--QLIYNNQFQPEK 203 (215)
Q Consensus 161 ~~~~~~~g~~~~~~g~~p~~~~~lid~-~G~v--~~~~~g~~~~~~ 203 (215)
..+.+.|++.. +| +++++|+ +|++ +..+.|....+.
T Consensus 68 ~~~~~~~~v~~-----~P--t~~~~d~~~G~~~~~~~~~G~~~~~~ 106 (130)
T 2lst_A 68 QELARRYRVPG-----TP--TFVFLVPKAGAWEEVGRLFGSRPRAE 106 (130)
Confidence 56788899987 89 9999995 6999 778877544433
No 162
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.37 E-value=4.1e-12 Score=90.41 Aligned_cols=99 Identities=15% Similarity=0.203 Sum_probs=75.7
Q ss_pred eCCCCCeeecC-Cc--CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEE
Q 028030 80 KDQEGRNVSLS-KF--KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLL 156 (215)
Q Consensus 80 ~~~~g~~~~l~-~~--~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 156 (215)
.+.+|...++. .+ .||++||+|| ++||++|+...+.|.++++++ .++.++.|+.|.
T Consensus 6 ~~~~g~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~------------------ 64 (118)
T 2f51_A 6 VHFNGTHEALLNRIKEAPGLVLVDFF-ATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK------------------ 64 (118)
T ss_dssp EEECSCHHHHHHHHHHCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT------------------
T ss_pred eEecCCHHHHHHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC------------------
Confidence 34455555554 23 4899999999 999999999999999999988 469999998753
Q ss_pred EcCChhHHHHhCCCccCCCCCCccEEEEEcC---CCcEEEEEeCCCCCCccHHHHHHH
Q 028030 157 SDEGNKVRKEWGVPADFFGSLPGRQTYILDK---NGVVQLIYNNQFQPEKHIDETLKF 211 (215)
Q Consensus 157 ~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~---~G~v~~~~~g~~~~~~~~~~il~~ 211 (215)
+.++.+.|++.. +| ++++++. +|+++..+.|.. .+.++++++.
T Consensus 65 ---~~~~~~~~~i~~-----~P--t~~~~~~~~~~G~~~~~~~G~~--~~~l~~~~~~ 110 (118)
T 2f51_A 65 ---NGNAADAYGVSS-----IP--ALFFVKKEGNEIKTLDQFVGAD--VSRIKADIEK 110 (118)
T ss_dssp ---CHHHHHHTTCCS-----SS--EEEEEEEETTEEEEEEEEESCC--HHHHHHHHHH
T ss_pred ---CHHHHHhcCCCC-----CC--EEEEEeCCCCcceEEEeecCCC--HHHHHHHHHH
Confidence 346788899987 89 8888875 499999999853 2335555443
No 163
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.36 E-value=1.1e-12 Score=107.07 Aligned_cols=78 Identities=15% Similarity=0.354 Sum_probs=67.0
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
-+||++||+|| ++||++|+...|.+.++++++++ .+.|+.|++|. +.++...|++..
T Consensus 24 ~~~~~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v~~ 80 (287)
T 3qou_A 24 SMTTPVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDA---------------------EQMIAAQFGLRA 80 (287)
T ss_dssp TTTSCEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTT---------------------CHHHHHTTTCCS
T ss_pred cCCCeEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCcc---------------------CHHHHHHcCCCC
Confidence 35899999999 99999999999999999999986 39999998753 347888999987
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|..+
T Consensus 81 -----~P--t~~~~-~~G~~~~~~~g~~~ 101 (287)
T 3qou_A 81 -----IP--TVYLF-QNGQPVDGFQGPQP 101 (287)
T ss_dssp -----SS--EEEEE-ETTEEEEEEESCCC
T ss_pred -----CC--eEEEE-ECCEEEEEeeCCCC
Confidence 99 88888 79999999988543
No 164
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.36 E-value=4.1e-12 Score=89.22 Aligned_cols=74 Identities=18% Similarity=0.267 Sum_probs=62.4
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...+.+.+++++++ ++.++.|+.|. +..+.+.|++..
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~---------------------~~~~~~~~~v~~- 79 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE---------------------VSEVTEKENITS- 79 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------THHHHHHTTCCS-
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC---------------------CHHHHHHcCCCc-
Confidence 5799999999 9999999999999999998876 59999998754 336778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| +++ +.++|+++..+.|.
T Consensus 80 ----~P--t~~-~~~~G~~~~~~~G~ 98 (112)
T 1syr_A 80 ----MP--TFK-VYKNGSSVDTLLGA 98 (112)
T ss_dssp ----SS--EEE-EEETTEEEEEEESC
T ss_pred ----cc--EEE-EEECCcEEEEEeCC
Confidence 99 654 44799999988884
No 165
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.36 E-value=3.1e-12 Score=94.26 Aligned_cols=73 Identities=18% Similarity=0.102 Sum_probs=60.5
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...|.|.++++++++ ++.++.|+.|. +.++...|++..
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~---------------------~~~~~~~~~i~~- 77 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITE---------------------VPDFNKMYELYD- 77 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTT---------------------CCTTTTSSCSCS-
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEcccc---------------------CHHHHHHcCCCC-
Confidence 4799999999 99999999999999999999975 48999998753 345778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEe
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
+| +++++ ++|+++....
T Consensus 78 ----~P--t~~~~-~~G~~v~~~~ 94 (142)
T 1qgv_A 78 ----PC--TVMFF-FRNKHIMIDL 94 (142)
T ss_dssp ----SC--EEEEE-ETTEEEEEEC
T ss_pred ----CC--EEEEE-ECCcEEEEec
Confidence 99 78777 5888886533
No 166
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.36 E-value=6.5e-12 Score=87.89 Aligned_cols=84 Identities=25% Similarity=0.346 Sum_probs=67.0
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||.|| ++||++|+...+.+.++.++++ ++.++.|+.|. ...+.+.|++..
T Consensus 25 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~---------------------~~~~~~~~~v~~- 79 (113)
T 1ti3_A 25 SQKLIVVDFT-ASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE---------------------LKAVAEEWNVEA- 79 (113)
T ss_dssp SSSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT---------------------CHHHHHHHHCSS-
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc---------------------cHHHHHhCCCCc-
Confidence 5899999999 9999999999999999998886 68999998743 456778889887
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHH
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLK 210 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~ 210 (215)
+| +++++ ++|+++..+.| .+.+ .+.+.++
T Consensus 80 ----~P--t~~~~-~~G~~~~~~~g-~~~~-~l~~~l~ 108 (113)
T 1ti3_A 80 ----MP--TFIFL-KDGKLVDKTVG-ADKD-GLPTLVA 108 (113)
T ss_dssp ----TT--EEEEE-ETTEEEEEEEC-CCTT-HHHHHHH
T ss_pred ----cc--EEEEE-eCCEEEEEEec-CCHH-HHHHHHH
Confidence 89 66666 79999999888 3433 3444443
No 167
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.35 E-value=5.9e-12 Score=88.79 Aligned_cols=73 Identities=27% Similarity=0.343 Sum_probs=62.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...+.+.++.++++ ++.++.|+.| ....+.+.|++..
T Consensus 27 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~---------------------~~~~~~~~~~v~~- 81 (118)
T 2vm1_A 27 TGKLVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVD---------------------ELKDVAEAYNVEA- 81 (118)
T ss_dssp HTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT---------------------TSHHHHHHTTCCS-
T ss_pred CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcc---------------------cCHHHHHHcCCCc-
Confidence 3899999999 9999999999999999998886 6999999874 3456788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
+| +++++ ++|+++..+.|
T Consensus 82 ----~P--t~~~~-~~g~~~~~~~g 99 (118)
T 2vm1_A 82 ----MP--TFLFI-KDGEKVDSVVG 99 (118)
T ss_dssp ----BS--EEEEE-ETTEEEEEEES
T ss_pred ----Cc--EEEEE-eCCeEEEEecC
Confidence 89 66666 79999998888
No 168
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.35 E-value=5.6e-13 Score=104.34 Aligned_cols=94 Identities=18% Similarity=0.289 Sum_probs=72.9
Q ss_pred CeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEE
Q 028030 76 SFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTL 155 (215)
Q Consensus 76 ~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~ 155 (215)
+..+.+++++.+......|+++||+|| ++||++|+...|.+.++++++++ .+.++.|+.|.
T Consensus 96 ~~~v~~l~~~~f~~~~~~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~----------------- 156 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSGELWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGD----------------- 156 (210)
T ss_dssp CTTSEECCHHHHHHHHHHSCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT-----------------
T ss_pred CCceEEecHHHHHHHHccCCcEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCc-----------------
Confidence 334445555444333246899999999 99999999999999999999875 48999988643
Q ss_pred EEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 156 LSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 156 ~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+..+...|++.. +| +++++ ++|+++..+.|..+
T Consensus 157 ----~~~l~~~~~v~~-----~P--t~~~~-~~G~~~~~~~G~~~ 189 (210)
T 3apq_A 157 ----DRMLCRMKGVNS-----YP--SLFIF-RSGMAAVKYNGDRS 189 (210)
T ss_dssp ----CHHHHHHTTCCS-----SS--EEEEE-CTTSCCEECCSCCC
T ss_pred ----cHHHHHHcCCCc-----CC--eEEEE-ECCCceeEecCCCC
Confidence 346778889987 99 88878 99999888888543
No 169
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.35 E-value=6e-12 Score=89.02 Aligned_cols=75 Identities=25% Similarity=0.333 Sum_probs=62.9
Q ss_pred CCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 90 SKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 90 ~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
.+.+||+++|+|| ++||++|+...|.+.++++++ ++.++.|+.| .+.++.+.|++
T Consensus 29 ~~~~~~~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~---------------------~~~~~~~~~~v 83 (117)
T 2xc2_A 29 EQHKNKLVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVD---------------------KLEETARKYNI 83 (117)
T ss_dssp HHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETT---------------------TSHHHHHHTTC
T ss_pred HhCCCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECC---------------------ccHHHHHHcCC
Confidence 3346899999999 999999999999999998877 6899999874 34567888999
Q ss_pred CccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 170 PADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 170 ~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
.. +| +++++ ++|+++..+.|
T Consensus 84 ~~-----~P--t~~~~-~~G~~~~~~~G 103 (117)
T 2xc2_A 84 SA-----MP--TFIAI-KNGEKVGDVVG 103 (117)
T ss_dssp CS-----SS--EEEEE-ETTEEEEEEES
T ss_pred Cc-----cc--eEEEE-eCCcEEEEEeC
Confidence 87 99 65544 89999999888
No 170
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.34 E-value=1e-11 Score=85.52 Aligned_cols=74 Identities=20% Similarity=0.305 Sum_probs=63.0
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
..||+++|.|| ++||++|+...+.+.+++++++ ++.++.|+.|. ..++.+.|++..
T Consensus 17 ~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~---------------------~~~~~~~~~v~~ 72 (104)
T 2vim_A 17 NKGRLIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ---------------------NEEAAAKYSVTA 72 (104)
T ss_dssp TTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------CHHHHHHTTCCS
T ss_pred cCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC---------------------CHHHHHHcCCcc
Confidence 46899999999 9999999999999999998886 69999998753 456778899987
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
+| +++++ ++|+++..+.|
T Consensus 73 -----~P--t~~~~-~~g~~~~~~~G 90 (104)
T 2vim_A 73 -----MP--TFVFI-KDGKEVDRFSG 90 (104)
T ss_dssp -----SS--EEEEE-ETTEEEEEEES
T ss_pred -----cc--EEEEE-eCCcEEEEEeC
Confidence 89 66655 59999999888
No 171
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.34 E-value=7.9e-12 Score=91.33 Aligned_cols=89 Identities=11% Similarity=0.201 Sum_probs=63.7
Q ss_pred CCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCC
Q 028030 81 DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEG 160 (215)
Q Consensus 81 ~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~ 160 (215)
+.+++.+...-..++.+||+|| ++||++|+...+.+.++++++++ ++.++.|+.|. +
T Consensus 37 ~l~~~~~~~~~~~~~~vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~---------------------~ 93 (140)
T 1v98_A 37 EADEKGFAQEVAGAPLTLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDE---------------------H 93 (140)
T ss_dssp ------------CCCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT---------------------C
T ss_pred cCCHHHHHHHHHcCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCC---------------------C
Confidence 3444444322223334999999 99999999999999999999886 49999998754 3
Q ss_pred hhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 161 NKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 161 ~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
..+.+.|++.. +| +++++ ++|+++..+.|..+
T Consensus 94 ~~l~~~~~v~~-----~P--t~~~~-~~G~~~~~~~G~~~ 125 (140)
T 1v98_A 94 PGLAARYGVRS-----VP--TLVLF-RRGAPVATWVGASP 125 (140)
T ss_dssp HHHHHHTTCCS-----SS--EEEEE-ETTEEEEEEESCCC
T ss_pred HHHHHHCCCCc-----cC--EEEEE-eCCcEEEEEeCCCC
Confidence 46788899987 89 77777 79999999988643
No 172
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.34 E-value=1e-11 Score=85.74 Aligned_cols=75 Identities=23% Similarity=0.334 Sum_probs=63.3
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
.+||+++|.|| ++||++|+...+.+.++++++++ ++.++.|+.| .+.++.+.|++..
T Consensus 18 ~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~---------------------~~~~~~~~~~v~~ 74 (106)
T 1xwb_A 18 ASGKLVVLDFF-ATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVD---------------------ECEDIAMEYNISS 74 (106)
T ss_dssp HTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETT---------------------TCHHHHHHTTCCS
T ss_pred cCCCEEEEEEE-CCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEecc---------------------chHHHHHHcCCCc
Confidence 36899999999 99999999999999999998863 5999999875 3456788899987
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
+| +++ +.++|+++..+.|
T Consensus 75 -----~P--t~~-~~~~G~~~~~~~g 92 (106)
T 1xwb_A 75 -----MP--TFV-FLKNGVKVEEFAG 92 (106)
T ss_dssp -----SS--EEE-EEETTEEEEEEES
T ss_pred -----cc--EEE-EEcCCcEEEEEcC
Confidence 99 654 4479999999888
No 173
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.34 E-value=5.6e-12 Score=88.44 Aligned_cols=75 Identities=13% Similarity=0.306 Sum_probs=63.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.++++||+|| ++||++|+...+.+.++.++++ ++.++.|..+ ...++.+.|++..
T Consensus 18 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~---------------------~~~~l~~~~~v~~- 72 (110)
T 2l6c_A 18 GLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSE---------------------ARPELMKELGFER- 72 (110)
T ss_dssp TCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGG---------------------GCHHHHHHTTCCS-
T ss_pred cCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCc---------------------CCHHHHHHcCCcc-
Confidence 4689999999 9999999999999999988775 5888888753 3456888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| +++++ ++|+++.++.|..
T Consensus 73 ----~P--t~~~~-~~G~~v~~~~G~~ 92 (110)
T 2l6c_A 73 ----VP--TLVFI-RDGKVAKVFSGIM 92 (110)
T ss_dssp ----SC--EEEEE-ESSSEEEEEESCC
T ss_pred ----cC--EEEEE-ECCEEEEEEcCCC
Confidence 89 88888 8999999998854
No 174
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.34 E-value=3e-12 Score=93.40 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=65.5
Q ss_pred CcEEEEEEcCCCC--hhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 95 KPVVVYFYPADET--PGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 95 k~~ll~f~~a~~C--~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+++||+|| ++|| ++|+...|.|.++.++|.++ +.|+-|++ |++.+++..||+..
T Consensus 34 ~~vlVdF~-A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdv---------------------De~~~la~~ygV~s- 89 (137)
T 2qsi_A 34 KIVVLFFR-GDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAA---------------------EAERGLMARFGVAV- 89 (137)
T ss_dssp SEEEEEEC-CCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECG---------------------GGHHHHHHHHTCCS-
T ss_pred CcEEEEEe-CCccCCCchhhHHhHHHHHHHHccCC-cEEEEEEC---------------------CCCHHHHHHcCCcc-
Confidence 49999999 9999 99999999999999999864 88888875 55668999999998
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +.+++ +||+++.+..|..+
T Consensus 90 ----iP--TlilF-kdG~~v~~~vG~~~ 110 (137)
T 2qsi_A 90 ----CP--SLAVV-QPERTLGVIAKIQD 110 (137)
T ss_dssp ----SS--EEEEE-ECCEEEEEEESCCC
T ss_pred ----CC--EEEEE-ECCEEEEEEeCCCC
Confidence 99 66666 89999999999654
No 175
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.33 E-value=4.8e-12 Score=90.96 Aligned_cols=88 Identities=15% Similarity=0.148 Sum_probs=68.3
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH----cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK----AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWG 168 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 168 (215)
.++++||+|| ++||++|+...|.+.++++++.. .++.++.|..| .+.++.+.|+
T Consensus 32 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~---------------------~~~~l~~~~~ 89 (127)
T 3h79_A 32 PEKDVFVLYY-VPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE---------------------KYPDVIERMR 89 (127)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT---------------------TCHHHHHHTT
T ss_pred CCCCEEEEEE-CCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc---------------------ccHhHHHhcC
Confidence 3799999999 99999999999999999998863 24777778764 3557888999
Q ss_pred CCccCCCCCCccEEEEEcCCCcEE-EEEeCCCCCCccHHHHHHHHh
Q 028030 169 VPADFFGSLPGRQTYILDKNGVVQ-LIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 169 ~~~~~~g~~p~~~~~lid~~G~v~-~~~~g~~~~~~~~~~il~~l~ 213 (215)
+.. +| +++++++++++. ..+.|. ...+++++.|+
T Consensus 90 v~~-----~P--t~~~~~~g~~~~~~~~~G~----~~~~~l~~~i~ 124 (127)
T 3h79_A 90 VSG-----FP--TMRYYTRIDKQEPFEYSGQ----RYLSLVDSFVF 124 (127)
T ss_dssp CCS-----SS--EEEEECSSCSSSCEECCSC----CCHHHHHHHHH
T ss_pred Ccc-----CC--EEEEEeCCCCCCceEecCC----ccHHHHHHHHH
Confidence 987 99 899998777754 456564 34566666654
No 176
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.33 E-value=2.4e-12 Score=93.77 Aligned_cols=95 Identities=9% Similarity=0.090 Sum_probs=70.8
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
++ ++||+|| ++||++|+...|.+.+++++++ +.++.|+.++..... . .|...++.+.|++..
T Consensus 31 ~~-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~-~-----------~d~~~~l~~~~~v~~- 92 (135)
T 3emx_A 31 QG-DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGER-E-----------LSAARLEMNKAGVEG- 92 (135)
T ss_dssp TS-SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHH-H-----------HHHHHHHHHHHTCCS-
T ss_pred CC-cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhh-h-----------hhhhHHHHHHcCCce-
Confidence 44 8999999 9999999999999999988775 889999875432110 0 133467888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+| ++++++ +|+++..+.|... .+.++++++.+.
T Consensus 93 ----~P--t~~~~~-~G~~v~~~~G~~~-~~~~~~~i~~~~ 125 (135)
T 3emx_A 93 ----TP--TLVFYK-EGRIVDKLVGATP-WSLKVEKAREIY 125 (135)
T ss_dssp ----SS--EEEEEE-TTEEEEEEESCCC-HHHHHHHHHHHC
T ss_pred ----eC--eEEEEc-CCEEEEEEeCCCC-HHHHHHHHHHHh
Confidence 99 666665 9999999999643 444555555443
No 177
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.33 E-value=5.6e-12 Score=89.39 Aligned_cols=90 Identities=18% Similarity=0.335 Sum_probs=66.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.|+++||+|| ++||++|+...|.|.+++++++ ..++.+..+..... +....+.+.||+..
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~---------------~~~~~~~~~~~i~~- 87 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQL---------------NDLQAFRSRYGIPT- 87 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGH---------------HHHHHHHHHHTCCS-
T ss_pred CCCeEEEEEE-CCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcH---------------HHHHHHHHHcCCCC-
Confidence 4789999999 9999999999999999988765 45666666543211 12245778889987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+| +++++ ++|+++.++.|.. ..+++.+.|+
T Consensus 88 ----~P--t~~~~-~~G~~~~~~~G~~----~~~~l~~~l~ 117 (118)
T 1zma_A 88 ----VP--GFVHI-TDGQINVRCDSSM----SAQEIKDFAG 117 (118)
T ss_dssp ----SC--EEEEE-ETTEEEEECCTTC----CHHHHHHHHT
T ss_pred ----CC--eEEEE-ECCEEEEEecCCC----CHHHHHHHhh
Confidence 89 78777 5999998888743 2355666554
No 178
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.31 E-value=8.7e-12 Score=98.42 Aligned_cols=77 Identities=17% Similarity=0.311 Sum_probs=65.7
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+...|.+.+++++++++ +.++.|+.| .+..+.+.|++..
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d---------------------~~~~l~~~~~v~~- 84 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQGK-LTVAKLNID---------------------QNPGTAPKYGIRG- 84 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT---------------------TCTTTGGGGTCCS-
T ss_pred cCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECC---------------------CCHHHHHHcCCCc-
Confidence 5799999999 999999999999999999999864 999999864 3456788899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|...
T Consensus 85 ----~P--t~~~~-~~G~~~~~~~G~~~ 105 (222)
T 3dxb_A 85 ----IP--TLLLF-KNGEVAATKVGALS 105 (222)
T ss_dssp ----BS--EEEEE-ETTEEEEEEESCCC
T ss_pred ----CC--EEEEE-ECCeEEEEeccccC
Confidence 99 77766 59999999988643
No 179
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.31 E-value=2.7e-12 Score=91.17 Aligned_cols=88 Identities=14% Similarity=0.182 Sum_probs=64.9
Q ss_pred EeCCCCCeeecC-CcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH----cCcEEEEEeCCCHHHHHHHHHHcCCCe
Q 028030 79 LKDQEGRNVSLS-KFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK----AGAEVIGISGDDSSSHKAFAKKYRLPY 153 (215)
Q Consensus 79 l~~~~g~~~~l~-~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~----~~v~vv~vs~d~~~~~~~~~~~~~~~~ 153 (215)
+.+++++.+... .-++|++||+|| ++||++|+...|.+.++++++++ .++.++.|..+..+
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~------------- 74 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND------------- 74 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-------------
T ss_pred eEEecccCHHHHhhcCCCCEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-------------
Confidence 344555544433 236899999999 99999999999999999999986 25888888875421
Q ss_pred EEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcE-EEEEeCC
Q 028030 154 TLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVV-QLIYNNQ 198 (215)
Q Consensus 154 ~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v-~~~~~g~ 198 (215)
+.+ ++.. +| ++++++++|++ +..+.|.
T Consensus 75 ---------~~~--~v~~-----~P--t~~~~~~~~~~~~~~~~G~ 102 (121)
T 2djj_A 75 ---------VPD--EIQG-----FP--TIKLYPAGAKGQPVTYSGS 102 (121)
T ss_dssp ---------CSS--CCSS-----SS--EEEEECSSCTTSCCCCCCC
T ss_pred ---------ccc--ccCc-----CC--eEEEEeCcCCCCceEecCC
Confidence 122 6665 88 99999988885 4556664
No 180
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.31 E-value=9.9e-12 Score=86.56 Aligned_cols=87 Identities=14% Similarity=0.217 Sum_probs=67.8
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc--CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKA--GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
+++++||+|| ++||++|+...|.+.++.+++.+. ++.++.|+.+. +.++.+.|++.
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---------------------~~~l~~~~~v~ 77 (111)
T 3uvt_A 20 AEGITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA---------------------ERNICSKYSVR 77 (111)
T ss_dssp HSSEEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT---------------------CHHHHHHTTCC
T ss_pred cCCcEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc---------------------cHhHHHhcCCC
Confidence 3789999999 999999999999999998877543 68888887643 34578889998
Q ss_pred ccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 171 ADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
. +| +++++ ++|+++..+.|.. ..+++.+.|+
T Consensus 78 ~-----~P--t~~~~-~~g~~~~~~~g~~----~~~~l~~~l~ 108 (111)
T 3uvt_A 78 G-----YP--TLLLF-RGGKKVSEHSGGR----DLDSLHRFVL 108 (111)
T ss_dssp S-----SS--EEEEE-ETTEEEEEECSCC----SHHHHHHHHH
T ss_pred c-----cc--EEEEE-eCCcEEEeccCCc----CHHHHHHHHH
Confidence 7 99 76666 7999998888853 3455555554
No 181
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=7.8e-12 Score=91.08 Aligned_cols=79 Identities=18% Similarity=0.230 Sum_probs=63.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC--
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP-- 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~-- 170 (215)
+++++||+|| ++||++|+...|.+.++++++++.++.++.|..|.. .++.+.|++.
T Consensus 25 ~~~~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~---------------------~~~~~~~~v~~~ 82 (137)
T 2dj0_A 25 KRVTWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY---------------------TDVSTRYKVSTS 82 (137)
T ss_dssp TTSCEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC---------------------HHHHHHTTCCCC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC---------------------HHHHHHccCccc
Confidence 4679999999 999999999999999999999865699998887543 3455666665
Q ss_pred ----ccCCCCCCccEEEEEcCCCcEEEEEeCCCCC
Q 028030 171 ----ADFFGSLPGRQTYILDKNGVVQLIYNNQFQP 201 (215)
Q Consensus 171 ----~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~ 201 (215)
. +| +++++ ++|+++..+.|....
T Consensus 83 ~~~~~-----~P--t~~~~-~~G~~~~~~~G~~~~ 109 (137)
T 2dj0_A 83 PLTKQ-----LP--TLILF-QGGKEAMRRPQIDKK 109 (137)
T ss_dssp SSSSC-----SS--EEEEE-SSSSEEEEESCBCSS
T ss_pred CCcCC-----CC--EEEEE-ECCEEEEEecCcCch
Confidence 5 88 77777 799999988886543
No 182
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.30 E-value=3.2e-11 Score=85.41 Aligned_cols=86 Identities=19% Similarity=0.217 Sum_probs=68.5
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+...+.+.++++++++ ++.++.|+.|. +..+.+.|++..
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~i~~- 84 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDT---------------------NPETARNFQVVS- 84 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCC---------------------CHHHHHhcCCCc-
Confidence 4789999999 99999999999999999998875 49999998753 346778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+| +++++ ++|+++..+.|... .+++.+.|+
T Consensus 85 ----~P--t~~~~-~~g~~~~~~~G~~~----~~~l~~~l~ 114 (121)
T 2i1u_A 85 ----IP--TLILF-KDGQPVKRIVGAKG----KAALLRELS 114 (121)
T ss_dssp ----SS--EEEEE-ETTEEEEEEESCCC----HHHHHHHTC
T ss_pred ----CC--EEEEE-ECCEEEEEecCCCC----HHHHHHHHH
Confidence 89 76666 59999998888532 344555444
No 183
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.30 E-value=2.4e-12 Score=94.27 Aligned_cols=78 Identities=15% Similarity=0.240 Sum_probs=65.8
Q ss_pred CCCcEEEEEEcCCC--ChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 93 KGKPVVVYFYPADE--TPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~--C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
.++++||+|| +.| |++|+...|.|.+++++|.++.+.|+-|++ |++.+++..||+.
T Consensus 33 ~~~~vlVdF~-a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdv---------------------De~~~lA~~ygV~ 90 (140)
T 2qgv_A 33 QAPDGVVLLS-SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADL---------------------EQSEAIGDRFGAF 90 (140)
T ss_dssp TCSSEEEEEC-CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCH---------------------HHHHHHHHHHTCC
T ss_pred CCCCEEEEEe-CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEEC---------------------CCCHHHHHHcCCc
Confidence 4578999999 988 999999999999999999753388888875 5566899999999
Q ss_pred ccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 171 ADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
. +| +++++ +||+++.+..|..+
T Consensus 91 s-----IP--TlilF-k~G~~v~~~~G~~~ 112 (140)
T 2qgv_A 91 R-----FP--ATLVF-TGGNYRGVLNGIHP 112 (140)
T ss_dssp S-----SS--EEEEE-ETTEEEEEEESCCC
T ss_pred c-----CC--EEEEE-ECCEEEEEEecCCC
Confidence 8 99 66666 89999999999643
No 184
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.28 E-value=8.8e-12 Score=88.64 Aligned_cols=74 Identities=16% Similarity=0.076 Sum_probs=61.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|++||+|| ++||++|+...|.+.++++++++ ++.++.|..+. +.++.+.|++..
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v~~- 75 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA---------------------YPQTCQKAGIKA- 75 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC---------------------CHHHHHHcCCCc-
Confidence 4789999999 99999999999999999999886 59999998754 346778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
+| ++++++++|++ ..+.|
T Consensus 76 ----~P--t~~~~~~~~~~-~~~~g 93 (122)
T 3aps_A 76 ----YP--SVKLYQYERAK-KSIWE 93 (122)
T ss_dssp ----SS--EEEEEEEEGGG-TEEEE
T ss_pred ----cc--eEEEEeCCCcc-ceeec
Confidence 89 99999888874 33433
No 185
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.25 E-value=4.4e-12 Score=94.50 Aligned_cols=91 Identities=10% Similarity=0.112 Sum_probs=61.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHH--HHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYE--KFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~--~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
.||++||+|| ++||++|+...|.+.+..+ ++.+ ..++.|.+|+. ..++...|++.
T Consensus 43 ~~KpVlV~F~-A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e--------------------~~~~~~~~~v~ 99 (151)
T 3ph9_A 43 SKKPLMVIHH-LEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHE--------------------TTDKNLSPDGQ 99 (151)
T ss_dssp HTCCEEEEEC-CTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSC--------------------CSCGGGCTTCC
T ss_pred cCCcEEEEEE-CCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCC--------------------chhhHhhcCCC
Confidence 5899999999 9999999999998887522 2222 23444444321 11234566776
Q ss_pred ccCCCCCCccEEEEEcCCCcEEEEEeCCCCC------CccHHHHHHHHh
Q 028030 171 ADFFGSLPGRQTYILDKNGVVQLIYNNQFQP------EKHIDETLKFLQ 213 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~------~~~~~~il~~l~ 213 (215)
+ +| +++++|++|+++....|.... ..+++++++.++
T Consensus 100 ~-----~P--T~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~ 141 (151)
T 3ph9_A 100 Y-----VP--RIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMK 141 (151)
T ss_dssp C-----SS--EEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHH
T ss_pred C-----CC--EEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHH
Confidence 5 89 999999999999988886111 245566666554
No 186
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.25 E-value=1.3e-11 Score=88.60 Aligned_cols=86 Identities=17% Similarity=0.315 Sum_probs=65.3
Q ss_pred CCCcEEEEEEcCCCCh--------------hhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEc
Q 028030 93 KGKPVVVYFYPADETP--------------GCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSD 158 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~--------------~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d 158 (215)
.||++||+|| ++||+ +|+...|.+.+++++++++ +.++.|+.|
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d--------------------- 76 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNID--------------------- 76 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETT---------------------
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECC---------------------
Confidence 5799999999 99999 9999999999999998864 899988864
Q ss_pred CChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 159 EGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 159 ~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
.+.++.+.||+.. +| +++++ ++|+++..+.|..+ .+++.+.|+
T Consensus 77 ~~~~l~~~~~v~~-----~P--t~~~~-~~G~~~~~~~G~~~----~~~l~~~l~ 119 (123)
T 1oaz_A 77 QNPGTAPKYGIRG-----IP--TLLLF-KNGEVAATKVGALS----KGQLKEFLD 119 (123)
T ss_dssp SCTTTGGGGTCCB-----SS--EEEEE-ESSSEEEEEESCCC----HHHHHHHHT
T ss_pred CCHHHHHHcCCCc-----cC--EEEEE-ECCEEEEEEeCCCC----HHHHHHHHH
Confidence 3457888999987 89 88888 89999999888532 344555554
No 187
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.25 E-value=2e-11 Score=96.69 Aligned_cols=89 Identities=18% Similarity=0.206 Sum_probs=67.9
Q ss_pred CCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcC--cEEEEEeCCCHHHHHHHHHHcCCCeEEEEc
Q 028030 81 DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAG--AEVIGISGDDSSSHKAFAKKYRLPYTLLSD 158 (215)
Q Consensus 81 ~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d 158 (215)
.++++.+...-.+||+++|+|| ++||++|+...|.+.++++++++.+ +.++.|..+
T Consensus 19 ~l~~~~~~~~~~~~~~v~v~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~--------------------- 76 (241)
T 3idv_A 19 VLNDANFDNFVADKDTVLLEFY-APWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDAT--------------------- 76 (241)
T ss_dssp EECTTTHHHHHTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETT---------------------
T ss_pred EecccCHHHHHhcCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEecc---------------------
Confidence 3444444332236899999999 9999999999999999999998765 888888763
Q ss_pred CChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 159 EGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 159 ~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
.+.++.+.|++.. +| ++++++ +|+++ .+.|...
T Consensus 77 ~~~~l~~~~~v~~-----~P--t~~~~~-~g~~~-~~~g~~~ 109 (241)
T 3idv_A 77 SASVLASRFDVSG-----YP--TIKILK-KGQAV-DYEGSRT 109 (241)
T ss_dssp TCHHHHHHTTCCS-----SS--EEEEEE-TTEEE-ECCSCSC
T ss_pred CCHHHHHhcCCCc-----CC--EEEEEc-CCCcc-cccCccc
Confidence 4457888999997 99 888885 67766 3666443
No 188
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.23 E-value=3.1e-11 Score=87.95 Aligned_cols=72 Identities=17% Similarity=0.251 Sum_probs=59.7
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+||++||+|| ++||++|+...|.|.++++++. ++.++.|..+... ..|++..
T Consensus 29 ~~~~vvv~f~-a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~------------------------~~~~i~~- 80 (135)
T 2dbc_A 29 KDLWVVIHLY-RSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCI------------------------EHYHDNC- 80 (135)
T ss_dssp SSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSC------------------------SSCCSSC-
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCc------------------------ccCCCCC-
Confidence 4689999999 9999999999999999998885 5888888876530 4678876
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+| ++++++ +|+++..+.|..
T Consensus 81 ----~P--t~~~~~-~G~~v~~~~G~~ 100 (135)
T 2dbc_A 81 ----LP--TIFVYK-NGQIEGKFIGII 100 (135)
T ss_dssp ----CS--EEEEES-SSSCSEEEESTT
T ss_pred ----CC--EEEEEE-CCEEEEEEEeEE
Confidence 89 777775 999999988854
No 189
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.21 E-value=2.8e-10 Score=86.52 Aligned_cols=104 Identities=10% Similarity=0.036 Sum_probs=67.8
Q ss_pred eecCCcCCCcEEEEEEcCCCChhhHHHHHH---HHHHHHHHHHcCcEEEEEeCCCHHHH-HHHHHHcCCCeEEEEcCChh
Q 028030 87 VSLSKFKGKPVVVYFYPADETPGCTKQACA---FRDSYEKFKKAGAEVIGISGDDSSSH-KAFAKKYRLPYTLLSDEGNK 162 (215)
Q Consensus 87 ~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~---l~~l~~~~~~~~v~vv~vs~d~~~~~-~~~~~~~~~~~~~~~d~~~~ 162 (215)
+......||++||+|| ++||++|+...+. ..++.+.+.+ ++.++.|..|...++ +.|.+ .
T Consensus 32 ~~~A~~~~KpVlvdF~-A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~--------------~ 95 (173)
T 3ira_A 32 FEKARKENKPVFLSIG-YSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMT--------------V 95 (173)
T ss_dssp HHHHHHHTCCEEEEEE-CTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHH--------------H
T ss_pred HHHHHHhCCCEEEecc-cchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHH--------------H
Confidence 3444446899999999 9999999987773 2455555554 488888887754333 33322 1
Q ss_pred HHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCC----CCCCccHHHHHHHHh
Q 028030 163 VRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQ----FQPEKHIDETLKFLQ 213 (215)
Q Consensus 163 ~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~----~~~~~~~~~il~~l~ 213 (215)
+...+|+.+ +| +++++|++|+++.....- ....+.+.++|+.+.
T Consensus 96 ~q~~~gv~g-----~P--t~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 96 CQIILGRGG-----WP--LNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp HHHHHSCCC-----SS--EEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred HHHHcCCCC-----Cc--ceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 222357776 99 999999999998763211 011234666666554
No 190
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.20 E-value=3.1e-11 Score=106.60 Aligned_cols=94 Identities=12% Similarity=0.163 Sum_probs=73.8
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH--cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK--AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
.||++||+|| ++||++|+...|.+.++++++++ .++.|+.|+.|+ |.+.++.+.|++.
T Consensus 29 ~~k~vlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~-------------------d~~~~l~~~~~V~ 88 (519)
T 3t58_A 29 SSSAWAVEFF-ASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE-------------------ETNSAVCREFNIA 88 (519)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS-------------------GGGHHHHHHTTCC
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc-------------------cccHHHHHHcCCc
Confidence 3689999999 99999999999999999999986 259999998864 3356888999999
Q ss_pred ccCCCCCCccEEEEEcC---CCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 171 ADFFGSLPGRQTYILDK---NGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~---~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
. +| +++++++ +|+++....|..+.+...+.+.+.++
T Consensus 89 ~-----~P--Tl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~ 127 (519)
T 3t58_A 89 G-----FP--TVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALE 127 (519)
T ss_dssp S-----BS--EEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHT
T ss_pred c-----cC--EEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHh
Confidence 7 99 9999997 78777777765444443344444443
No 191
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.20 E-value=5.6e-11 Score=85.03 Aligned_cols=77 Identities=21% Similarity=0.350 Sum_probs=64.1
Q ss_pred cCCCcEEEEEEcCC-------CChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHH
Q 028030 92 FKGKPVVVYFYPAD-------ETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVR 164 (215)
Q Consensus 92 ~~gk~~ll~f~~a~-------~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 164 (215)
..||+++|+|| ++ ||++|+...|.|.++++++++ ++.++.|.+++...+ .|....+.
T Consensus 22 ~~~~~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~--------------~d~~~~~~ 85 (123)
T 1wou_A 22 HNGKTIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYW--------------KDPNNDFR 85 (123)
T ss_dssp TTTSEEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHH--------------HCTTCHHH
T ss_pred hCCCEEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhh--------------hchhHHHH
Confidence 35899999999 99 999999999999999988865 699999999875432 26677899
Q ss_pred HHhCCCccCCCCCCccEEEEEcCCCcE
Q 028030 165 KEWGVPADFFGSLPGRQTYILDKNGVV 191 (215)
Q Consensus 165 ~~~g~~~~~~g~~p~~~~~lid~~G~v 191 (215)
..|++.. +| +++++++.+++
T Consensus 86 ~~~~i~~-----~P--t~~~~~~~~~~ 105 (123)
T 1wou_A 86 KNLKVTA-----VP--TLLKYGTPQKL 105 (123)
T ss_dssp HHHCCCS-----SS--EEEETTSSCEE
T ss_pred HHCCCCe-----eC--EEEEEcCCceE
Confidence 9999997 99 88888774444
No 192
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.20 E-value=4.3e-11 Score=79.35 Aligned_cols=79 Identities=20% Similarity=0.261 Sum_probs=60.3
Q ss_pred cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCC
Q 028030 96 PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFG 175 (215)
Q Consensus 96 ~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g 175 (215)
++|++|| ++||++|+...|.++++++++++ ++.++.|+.| .+.++.+.||+..
T Consensus 3 ~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~---------------------~~~~~~~~~~v~~---- 55 (85)
T 1nho_A 3 VNIEVFT-SPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIM---------------------VDREKAIEYGLMA---- 55 (85)
T ss_dssp CCEEEES-CSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTT---------------------TCGGGGGGTCSSC----
T ss_pred EEEEEEE-CCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECC---------------------CCHHHHHhCCcee----
Confidence 5789999 99999999999999999999875 5899998874 3457888999987
Q ss_pred CCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHH
Q 028030 176 SLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLK 210 (215)
Q Consensus 176 ~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~ 210 (215)
+| ++++ +|++ .+.|..+. +.+.+.++
T Consensus 56 -~P--t~~~---~G~~--~~~G~~~~-~~l~~~l~ 81 (85)
T 1nho_A 56 -VP--AIAI---NGVV--RFVGAPSR-EELFEAIN 81 (85)
T ss_dssp -SS--EEEE---TTTE--EEECSSCC-HHHHHHHH
T ss_pred -eC--EEEE---CCEE--EEccCCCH-HHHHHHHH
Confidence 99 6655 8998 56664333 33444443
No 193
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.83 E-value=1.5e-12 Score=89.74 Aligned_cols=77 Identities=21% Similarity=0.352 Sum_probs=62.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+|+++|.|| ++||++|+...+.+.++.+++++ ++.++.|+.|. +.++.+.|++..
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v~~- 73 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE---------------------NPNTAAQYGIRS- 73 (106)
Confidence 4789999999 99999999999999999998886 47888776543 345677788886
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|..+
T Consensus 74 ----~P--t~~~~-~~g~~~~~~~g~~~ 94 (106)
T 2yj7_A 74 ----IP--TLLLF-KNGQVVDRLVGAQP 94 (106)
Confidence 88 78888 89999988877543
No 194
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.16 E-value=1.2e-10 Score=92.91 Aligned_cols=69 Identities=14% Similarity=0.261 Sum_probs=59.0
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH--cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK--AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
.++++||+|| ++||++|+...|.+.++++++++ .++.++.|+++. |.+.++.+.|++.
T Consensus 29 ~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~-------------------~~~~~l~~~~~v~ 88 (244)
T 3q6o_A 29 SRSAWAVEFF-ASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE-------------------ETNSAVCRDFNIP 88 (244)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS-------------------TTTHHHHHHTTCC
T ss_pred CCCeEEEEEE-CCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc-------------------hhhHHHHHHcCCC
Confidence 3589999999 99999999999999999999986 369999998743 2356788999998
Q ss_pred ccCCCCCCccEEEEEcCC
Q 028030 171 ADFFGSLPGRQTYILDKN 188 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~ 188 (215)
. +| +++++++.
T Consensus 89 ~-----~P--t~~~~~~g 99 (244)
T 3q6o_A 89 G-----FP--TVRFFXAF 99 (244)
T ss_dssp S-----SS--EEEEECTT
T ss_pred c-----cC--EEEEEeCC
Confidence 7 99 99999863
No 195
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.16 E-value=2.2e-10 Score=90.06 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=62.2
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH---cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKK---AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~---~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
+++++|+|| ++||++|+...|.+.++++++++ .++.++.|+.| .+..+...|++.
T Consensus 134 ~~~~~v~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~---------------------~~~~l~~~~~v~ 191 (226)
T 1a8l_A 134 QDVRILVFV-TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI---------------------EYPEWADQYNVM 191 (226)
T ss_dssp SCEEEEEEE-CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG---------------------GCHHHHHHTTCC
T ss_pred CCcEEEEEe-CCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc---------------------cCHHHHHhCCCc
Confidence 444599999 99999999999999999999984 36888888754 345678889998
Q ss_pred ccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 171 ADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
. +| +++++ ++|+++..+.|...
T Consensus 192 ~-----~P--t~~~~-~~G~~~~~~~G~~~ 213 (226)
T 1a8l_A 192 A-----VP--KIVIQ-VNGEDRVEFEGAYP 213 (226)
T ss_dssp S-----SC--EEEEE-ETTEEEEEEESCCC
T ss_pred c-----cC--eEEEE-eCCceeEEEcCCCC
Confidence 7 99 65555 79999988888543
No 196
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.14 E-value=6.5e-12 Score=90.16 Aligned_cols=84 Identities=25% Similarity=0.354 Sum_probs=66.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...+.|.++.++++ ++.++.|+.| .+.++.+.|++..
T Consensus 35 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~---------------------~~~~~~~~~~v~~- 89 (130)
T 1wmj_A 35 AGKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVD---------------------ELKEVAEKYNVEA- 89 (130)
T ss_dssp TTCBCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTT---------------------TSGGGHHHHTCCS-
T ss_pred cCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEecc---------------------chHHHHHHcCCCc-
Confidence 5899999999 9999999999999999998886 5888888764 3467888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHH
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLK 210 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~ 210 (215)
+| +++++ ++|+++..+.| .+.+. +.+.++
T Consensus 90 ----~P--t~~~~-~~g~~~~~~~g-~~~~~-l~~~l~ 118 (130)
T 1wmj_A 90 ----MP--TFLFI-KDGAEADKVVG-ARKDD-LQNTIV 118 (130)
T ss_dssp ----SC--CCCBC-TTTTCCBCCCT-TCTTT-HHHHHH
T ss_pred ----cc--eEEEE-eCCeEEEEEeC-CCHHH-HHHHHH
Confidence 99 55544 89999888877 34443 444443
No 197
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.13 E-value=2.1e-11 Score=85.88 Aligned_cols=87 Identities=21% Similarity=0.352 Sum_probs=66.4
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc--CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKA--GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
++|++||.|| ++||++|+...+.+.++++++++. ++.++.|..+ .+..+.+.|++.
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~---------------------~~~~~~~~~~v~ 80 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDAT---------------------EESDLAQQYGVR 80 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETT---------------------TCCSSHHHHTCC
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCC---------------------CCHHHHHHCCCC
Confidence 5789999999 999999999999999999988754 4666666653 345788899998
Q ss_pred ccCCCCCCccEEEEEcCCCcEE--EEEeCCCCCCccHHHHHHHHh
Q 028030 171 ADFFGSLPGRQTYILDKNGVVQ--LIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~G~v~--~~~~g~~~~~~~~~~il~~l~ 213 (215)
. +| +++++ ++|+++ ..+.|.. ..+++.+.|+
T Consensus 81 ~-----~P--t~~~~-~~g~~~~~~~~~g~~----~~~~l~~~l~ 113 (120)
T 1mek_A 81 G-----YP--TIKFF-RNGDTASPKEYTAGR----EADDIVNWLK 113 (120)
T ss_dssp S-----SS--EEEEE-ESSCSSSCEECCCCS----SHHHHHHHHH
T ss_pred c-----cc--EEEEE-eCCCcCCcccccCcc----CHHHHHHHHH
Confidence 7 89 88888 688866 6676643 2344555544
No 198
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.13 E-value=7.6e-11 Score=78.15 Aligned_cols=69 Identities=23% Similarity=0.303 Sum_probs=56.1
Q ss_pred CcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCC
Q 028030 95 KPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFF 174 (215)
Q Consensus 95 k~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~ 174 (215)
.++|++|| ++||++|+...+.++++++++++ ++.++.|+.| .+.++.+.||+..
T Consensus 3 ~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~---------------------~~~~~~~~~~v~~--- 56 (85)
T 1fo5_A 3 KVKIELFT-SPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVM---------------------ENPQKAMEYGIMA--- 56 (85)
T ss_dssp CEEEEEEE-CCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESS---------------------SSCCTTTSTTTCC---
T ss_pred ceEEEEEe-CCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECC---------------------CCHHHHHHCCCcc---
Confidence 57899999 99999999999999999988874 5899998874 3446778889987
Q ss_pred CCCCccEEEEEcCCCcEEEEEeCC
Q 028030 175 GSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 175 g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+| ++++ +|++ .+.|.
T Consensus 57 --~P--t~~~---~G~~--~~~G~ 71 (85)
T 1fo5_A 57 --VP--TIVI---NGDV--EFIGA 71 (85)
T ss_dssp --SS--EEEE---TTEE--ECCSS
T ss_pred --cC--EEEE---CCEE--eeecC
Confidence 99 5555 8988 56664
No 199
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.10 E-value=5.9e-11 Score=87.44 Aligned_cols=75 Identities=13% Similarity=0.240 Sum_probs=53.7
Q ss_pred CCcEEEEEEcCCC--ChhhHHHHHHHHHHHHHHHHcCcE--EEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 94 GKPVVVYFYPADE--TPGCTKQACAFRDSYEKFKKAGAE--VIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 94 gk~~ll~f~~a~~--C~~C~~~~~~l~~l~~~~~~~~v~--vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
++.+||+|| +.| |++|+...|.|.+++++| + ++. ++.|+.| .+.+++..|++
T Consensus 34 ~~~~vv~f~-~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d---------------------~~~~la~~~~V 89 (142)
T 2es7_A 34 VGDGVILLS-SDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLE---------------------QSEAIGDRFNV 89 (142)
T ss_dssp CCSEEEEEC-CCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHH---------------------HHHHHHHTTTC
T ss_pred CCCEEEEEE-CCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECC---------------------CCHHHHHhcCC
Confidence 356788888 766 999999999999999998 4 477 8888754 23568889999
Q ss_pred CccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 170 PADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 170 ~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
.. +| +++++ ++|+++.++.|..+
T Consensus 90 ~~-----iP--T~~~f-k~G~~v~~~~G~~~ 112 (142)
T 2es7_A 90 RR-----FP--ATLVF-TDGKLRGALSGIHP 112 (142)
T ss_dssp CS-----SS--EEEEE-SCC----CEESCCC
T ss_pred Cc-----CC--eEEEE-eCCEEEEEEeCCCC
Confidence 97 99 88888 89999999988543
No 200
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.09 E-value=9e-10 Score=90.77 Aligned_cols=69 Identities=17% Similarity=0.327 Sum_probs=58.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.++++||+|| ++||++|+...|.+.++++++++. +.++.|.+|.. .+.++...|++..
T Consensus 34 ~~~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~-------------------~~~~l~~~~~I~~- 91 (298)
T 3ed3_A 34 TNYTSLVEFY-APWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLN-------------------KNKALCAKYDVNG- 91 (298)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTST-------------------TTHHHHHHTTCCB-
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCc-------------------cCHHHHHhCCCCc-
Confidence 4789999999 999999999999999999999864 89999988632 3567888999997
Q ss_pred CCCCCCccEEEEEcCCCc
Q 028030 173 FFGSLPGRQTYILDKNGV 190 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~ 190 (215)
+| +++++++ |+
T Consensus 92 ----~P--t~~~~~~-g~ 102 (298)
T 3ed3_A 92 ----FP--TLMVFRP-PK 102 (298)
T ss_dssp ----SS--EEEEEEC-CC
T ss_pred ----cc--eEEEEEC-Cc
Confidence 99 8888875 54
No 201
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.06 E-value=3.8e-10 Score=90.43 Aligned_cols=88 Identities=17% Similarity=0.256 Sum_probs=66.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+|+++||+|| ++||++|+...|.|.+++++|+ ++.|+.|..+. ..+...|++..
T Consensus 132 ~~k~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~----------------------~~l~~~~~I~~- 185 (245)
T 1a0r_P 132 KITTIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN----------------------TGAGDRFSSDV- 185 (245)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH----------------------HCCTTSSCTTT-
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc----------------------HHHHHHCCCCC-
Confidence 4789999999 9999999999999999999987 48999887532 12455788886
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCC---CccHHHHHHHHh
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQP---EKHIDETLKFLQ 213 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~---~~~~~~il~~l~ 213 (215)
+| +++++ ++|+++..+.|.... +-..+++.+.|+
T Consensus 186 ----~P--Tll~~-~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~ 222 (245)
T 1a0r_P 186 ----LP--TLLVY-KGGELLSNFISVTEQLAEEFFTGDVESFLN 222 (245)
T ss_dssp ----CS--EEEEE-ETTEEEEEETTGGGGSCTTCCHHHHHHHHH
T ss_pred ----CC--EEEEE-ECCEEEEEEeCCcccccccccHHHHHHHHH
Confidence 99 77666 599999998885321 123455555554
No 202
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.04 E-value=1.7e-09 Score=86.58 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=60.0
Q ss_pred CcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH---cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHh
Q 028030 91 KFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK---AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEW 167 (215)
Q Consensus 91 ~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~---~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (215)
+++|+++|++|| ++||++|+...|.+.+++.++++ .++.+..|..+ .+.++...|
T Consensus 135 ~~~~~~~vv~F~-a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~---------------------~~~~~~~~~ 192 (243)
T 2hls_A 135 SLKGRVHIETII-TPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY---------------------ENPDIADKY 192 (243)
T ss_dssp HCCSCEEEEEEE-CSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT---------------------TCHHHHHHT
T ss_pred HcCCCcEEEEEE-CCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc---------------------cCHHHHHHc
Confidence 356888999999 99999999999999999999853 46888888754 344677889
Q ss_pred CCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 168 GVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 168 g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
++.. +| ++++ +|+++ +.|..+
T Consensus 193 ~V~~-----vP--t~~i---~G~~~--~~G~~~ 213 (243)
T 2hls_A 193 GVMS-----VP--SIAI---NGYLV--FVGVPY 213 (243)
T ss_dssp TCCS-----SS--EEEE---TTEEE--EESCCC
T ss_pred CCee-----eC--eEEE---CCEEE--EeCCCC
Confidence 9987 99 6665 78875 666543
No 203
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=77.59 Aligned_cols=85 Identities=15% Similarity=0.215 Sum_probs=64.6
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
++++||+|| ++||++|+...|.|.+++++|+ ++.++-|..|.. ...|++..
T Consensus 23 ~~~vvv~F~-a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~------------------------~~~~~v~~-- 73 (118)
T 3evi_A 23 DVWVIIHLY-RSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSC------------------------IQHYHDNC-- 73 (118)
T ss_dssp TCEEEEEEE-CTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGT------------------------STTCCGGG--
T ss_pred CCeEEEEEe-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHh------------------------HHHCCCCC--
Confidence 458999999 9999999999999999999986 489998876431 25678887
Q ss_pred CCCCCccEEEEEcCCCcEEEEEeCCCCC---CccHHHHHHHHh
Q 028030 174 FGSLPGRQTYILDKNGVVQLIYNNQFQP---EKHIDETLKFLQ 213 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~v~~~~~g~~~~---~~~~~~il~~l~ 213 (215)
+| +++++ ++|+++.++.|.... +-..+++-..|.
T Consensus 74 ---~P--T~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~ 110 (118)
T 3evi_A 74 ---LP--TIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLA 110 (118)
T ss_dssp ---CS--EEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHH
T ss_pred ---CC--EEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHH
Confidence 99 65555 899999999885431 223455555444
No 204
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.00 E-value=3.6e-11 Score=84.18 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=55.5
Q ss_pred eeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 028030 86 NVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRK 165 (215)
Q Consensus 86 ~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 165 (215)
.+++++..||.+||+|| ++||++|+...|.|.+++++++ .|-+..|+. .+...++..
T Consensus 4 ~~~la~~~~k~~vV~F~-A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~-----------------~~~~~~l~~ 60 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYG-AYWCPHCQDQKELFGAAFDQVP-----YVECSPNGP-----------------GTPQAQECT 60 (106)
T ss_dssp HHHHHHHHHHHTCEEEE-CTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCT-----------------TSCCCHHHH
T ss_pred hhHHHHhcCCCEEEEEE-CCCCHHHHHHHHHHHHHHHhCC-----EEEEecccc-----------------cchhHHHHH
Confidence 35666777899999999 9999999999999998875443 333332221 024678999
Q ss_pred HhCCCccCCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 166 EWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 166 ~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
.|++.. +| + +++ +|++ +.|.
T Consensus 61 ~~~V~~-----~P--T-~~i--~G~~---~~G~ 80 (106)
T 3kp8_A 61 EAGITS-----YP--T-WII--NGRT---YTGV 80 (106)
T ss_dssp HTTCCS-----SS--E-EEE--TTEE---EESC
T ss_pred HcCCeE-----eC--E-EEE--CCEE---ecCC
Confidence 999998 99 5 445 7874 5564
No 205
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.00 E-value=3.4e-09 Score=74.37 Aligned_cols=78 Identities=14% Similarity=0.119 Sum_probs=60.3
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
+++++|+|+ ++||++|+...|.++++.++ .++.++.|.+|.... -...++..||+...
T Consensus 24 ~~~vvi~kh-atwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~r~-----------------~Sn~IA~~~~V~h~- 81 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISANAYDQFNKFLYE---RDMDGYYLIVQQERD-----------------LSDYIAKKTNVKHE- 81 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGGHH-----------------HHHHHHHHHTCCCC-
T ss_pred CCCEEEEEE-CCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecCch-----------------hhHHHHHHhCCccC-
Confidence 789999999 99999999999999999874 358888887654322 12458889999842
Q ss_pred CCCCCccEEEEEcCCCcEEEEE-eCCC
Q 028030 174 FGSLPGRQTYILDKNGVVQLIY-NNQF 199 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~v~~~~-~g~~ 199 (215)
.| +++++ ++|++++.. .+.+
T Consensus 82 ---sP--q~il~-k~G~~v~~~SH~~I 102 (112)
T 3iv4_A 82 ---SP--QAFYF-VNGEMVWNRDHGDI 102 (112)
T ss_dssp ---SS--EEEEE-ETTEEEEEEEGGGC
T ss_pred ---CC--eEEEE-ECCEEEEEeecccc
Confidence 78 77777 899999884 4443
No 206
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.99 E-value=1.5e-09 Score=70.54 Aligned_cols=62 Identities=19% Similarity=0.304 Sum_probs=50.1
Q ss_pred EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCC
Q 028030 97 VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGS 176 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~ 176 (215)
..|+|| ++||++|+...+.+.++.++++. ++.++.|. +.++.+.||+..
T Consensus 2 ~~v~f~-a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~------------------------~~~~~~~~~v~~----- 50 (77)
T 1ilo_A 2 MKIQIY-GTGCANCQMLEKNAREAVKELGI-DAEFEKIK------------------------EMDQILEAGLTA----- 50 (77)
T ss_dssp EEEEEE-CSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC------------------------SHHHHHHHTCSS-----
T ss_pred cEEEEE-cCCChhHHHHHHHHHHHHHHcCC-ceEEEEec------------------------CHHHHHHCCCCc-----
Confidence 468999 99999999999999999888764 47777664 457788899987
Q ss_pred CCccEEEEEcCCCcEEEE
Q 028030 177 LPGRQTYILDKNGVVQLI 194 (215)
Q Consensus 177 ~p~~~~~lid~~G~v~~~ 194 (215)
+| ++++ +|+++..
T Consensus 51 ~P--t~~~---~G~~~~~ 63 (77)
T 1ilo_A 51 LP--GLAV---DGELKIM 63 (77)
T ss_dssp SS--CEEE---TTEEEEC
T ss_pred CC--EEEE---CCEEEEc
Confidence 99 5555 8998765
No 207
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.97 E-value=1e-09 Score=95.80 Aligned_cols=87 Identities=21% Similarity=0.360 Sum_probs=67.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc-CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKA-GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
.||++||+|| ++||++|+...|.+.++++++++. ++.++.|..+. .++...|++.+
T Consensus 369 ~~k~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~----------------------~~~~~~~~v~~ 425 (481)
T 3f8u_A 369 ENKDVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA----------------------NDVPSPYEVRG 425 (481)
T ss_dssp TTCEEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS----------------------SCCCTTCCCCS
T ss_pred CCCcEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc----------------------hhhHhhCCCcc
Confidence 4899999999 999999999999999999999875 67787776533 14556788887
Q ss_pred cCCCCCCccEEEEEcCCCcE-EEEEeCCCCCCccHHHHHHHHh
Q 028030 172 DFFGSLPGRQTYILDKNGVV-QLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v-~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+| ++++++++|++ ...+.|.. ..+++++.|+
T Consensus 426 -----~P--t~~~~~~~~~~~~~~~~G~~----~~~~l~~~l~ 457 (481)
T 3f8u_A 426 -----FP--TIYFSPANKKLNPKKYEGGR----ELSDFISYLQ 457 (481)
T ss_dssp -----SS--EEEEECTTCTTSCEECCSCC----SHHHHHHHHH
T ss_pred -----cC--EEEEEeCCCeEeeeEeCCCC----CHHHHHHHHH
Confidence 89 99999888875 45666643 3455555554
No 208
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.96 E-value=2.6e-09 Score=84.45 Aligned_cols=86 Identities=17% Similarity=0.282 Sum_probs=66.0
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcC--cEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAG--AEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
.+++++|+|| ++||++|+...|.+.++++++++++ +.++.|..+. +.++.+.|++.
T Consensus 146 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~---------------------~~~l~~~~~v~ 203 (241)
T 3idv_A 146 DADIILVEFY-APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA---------------------ETDLAKRFDVS 203 (241)
T ss_dssp HCSEEEEEEE-CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT---------------------CHHHHHHTTCC
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC---------------------CHHHHHHcCCc
Confidence 4689999999 9999999999999999999998653 7888887643 45688899998
Q ss_pred ccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 171 ADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
. +| ++++++ +|+.+. +.|.. ..+++++.|+
T Consensus 204 ~-----~P--t~~~~~-~g~~~~-~~g~~----~~~~l~~~l~ 233 (241)
T 3idv_A 204 G-----YP--TLKIFR-KGRPYD-YNGPR----EKYGIVDYMI 233 (241)
T ss_dssp S-----SS--EEEEEE-TTEEEE-CCSCC----SHHHHHHHHH
T ss_pred c-----cC--EEEEEE-CCeEEE-ecCCC----CHHHHHHHHH
Confidence 7 89 777775 687765 66643 3344544443
No 209
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.96 E-value=9.2e-10 Score=86.68 Aligned_cols=88 Identities=16% Similarity=0.260 Sum_probs=66.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+|+++||.|| ++||++|+...|.|.+++++|+ ++.|+.|..+ +..+...|++..
T Consensus 119 ~~k~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~----------------------~~~l~~~~~i~~- 172 (217)
T 2trc_P 119 KVTTIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS----------------------NTGAGDRFSSDV- 172 (217)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH----------------------HHTCSTTSCGGG-
T ss_pred CCcEEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC----------------------cHHHHHHCCCCC-
Confidence 4689999999 9999999999999999999885 6899988754 123556788887
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCCC---CccHHHHHHHHh
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQP---EKHIDETLKFLQ 213 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~~---~~~~~~il~~l~ 213 (215)
+| +++++ ++|+++..+.|.... +-..+++.+.|+
T Consensus 173 ----~P--Tl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~ 209 (217)
T 2trc_P 173 ----LP--TLLVY-KGGELISNFISVAEQFAEDFFAADVESFLN 209 (217)
T ss_dssp ----CS--EEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHH
T ss_pred ----CC--EEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHH
Confidence 89 77777 599999988884321 122355555554
No 210
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.95 E-value=5.7e-09 Score=77.66 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=63.0
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
.||+++|+|+ ++||..|+..-..+ .++.+.+.+ ++.+|-+..|+++. ..+.+.|++
T Consensus 41 ~~K~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~-------------------~~l~~~y~v 99 (153)
T 2dlx_A 41 QNKWLMINIQ-NVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEG-------------------QRYIQFYKL 99 (153)
T ss_dssp HTCEEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHH-------------------HHHHHHHTC
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhH-------------------HHHHHHcCC
Confidence 4899999999 99999999776554 344444433 58888888876532 345567888
Q ss_pred CccCCCCCCccEEEEEcCC-CcEEEEEeCCCCCCccHHHHHHHH
Q 028030 170 PADFFGSLPGRQTYILDKN-GVVQLIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 170 ~~~~~g~~p~~~~~lid~~-G~v~~~~~g~~~~~~~~~~il~~l 212 (215)
.. +| +++++|++ |+.+..+.| .+.++.++.+.+.+
T Consensus 100 ~~-----~P--~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 100 GD-----FP--YVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp CS-----SS--EEEEECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred CC-----CC--EEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 76 88 99999998 876666655 44444444444444
No 211
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.94 E-value=3.1e-09 Score=90.30 Aligned_cols=78 Identities=17% Similarity=0.279 Sum_probs=63.0
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHH-----cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHh
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKK-----AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEW 167 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (215)
.++++||.|| ++||++|+...|.+.++++++++ .++.++.|..+ .+..+.+.|
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~---------------------~~~~l~~~~ 78 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD---------------------QHSDIAQRY 78 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT---------------------TCHHHHHHT
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC---------------------ccHHHHHhc
Confidence 4789999999 99999999999999999999953 24888888754 456788899
Q ss_pred CCCccCCCCCCccEEEEEcCCCcEEEE-EeCCCC
Q 028030 168 GVPADFFGSLPGRQTYILDKNGVVQLI-YNNQFQ 200 (215)
Q Consensus 168 g~~~~~~g~~p~~~~~lid~~G~v~~~-~~g~~~ 200 (215)
++.+ +| +++++ ++|+++.. +.|..+
T Consensus 79 ~v~~-----~P--t~~~f-~~G~~~~~~~~G~~~ 104 (382)
T 2r2j_A 79 RISK-----YP--TLKLF-RNGMMMKREYRGQRS 104 (382)
T ss_dssp TCCE-----ES--EEEEE-ETTEEEEEECCSCCS
T ss_pred CCCc-----CC--EEEEE-eCCcEeeeeecCcch
Confidence 9997 99 66655 68998764 777543
No 212
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.91 E-value=1.7e-09 Score=81.67 Aligned_cols=110 Identities=11% Similarity=0.206 Sum_probs=71.4
Q ss_pred CCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEE--EeCC------------------------
Q 028030 84 GRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIG--ISGD------------------------ 137 (215)
Q Consensus 84 g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~--vs~d------------------------ 137 (215)
+....+.+-.+|++|++|| ..|||+|....+.|.++.+++++ +.++. +...
T Consensus 12 ~~~~~~G~~~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~ 88 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFF-DYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFH 88 (175)
T ss_dssp TTSCEEECTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHH
T ss_pred CCCCCcCCCCCCEEEEEEE-CCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHH
Confidence 3344566667899999999 99999999999999999888764 55554 4332
Q ss_pred ----------CHHHHHHHHHHcCCCeEEE------------EcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEE
Q 028030 138 ----------DSSSHKAFAKKYRLPYTLL------------SDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIY 195 (215)
Q Consensus 138 ----------~~~~~~~~~~~~~~~~~~~------------~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~ 195 (215)
+.+.+.+++++.|++...+ .+.+.+.+..+|+.+ +| +++| +|+ .+
T Consensus 89 ~~lf~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g-----tP---t~~i--~g~---~~ 155 (175)
T 3gyk_A 89 WALMGMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNG-----TP---SFVV--EDA---LV 155 (175)
T ss_dssp HHHHTCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCS-----SS---EEEE--TTE---EE
T ss_pred HHHHhcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCcc-----CC---EEEE--CCE---Ee
Confidence 2345556666667664322 233456778899987 89 4455 464 34
Q ss_pred eCCCCCCccHHHHHH
Q 028030 196 NNQFQPEKHIDETLK 210 (215)
Q Consensus 196 ~g~~~~~~~~~~il~ 210 (215)
.|..+. +.++++++
T Consensus 156 ~G~~~~-~~l~~~i~ 169 (175)
T 3gyk_A 156 PGFVEQ-SQLQDAVD 169 (175)
T ss_dssp CSCCCH-HHHHHHHH
T ss_pred eCCCCH-HHHHHHHH
Confidence 454332 33444433
No 213
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.90 E-value=4e-09 Score=92.61 Aligned_cols=77 Identities=19% Similarity=0.286 Sum_probs=64.1
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.++++||.|| ++||++|+...|.+.++++++++.++.++.|..+ .+..+.+.||+.+
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~---------------------~~~~l~~~~~v~~- 86 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKNMAPEYVKAAETLVEKNITLAQIDCT---------------------ENQDLCMEHNIPG- 86 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETT---------------------TCHHHHHHTTCCS-
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECC---------------------CCHHHHHhcCCCc-
Confidence 4789999999 9999999999999999999998767999999854 3456888999997
Q ss_pred CCCCCCccEEEEEcCCCcE--EEEEeCCC
Q 028030 173 FFGSLPGRQTYILDKNGVV--QLIYNNQF 199 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v--~~~~~g~~ 199 (215)
+| +++++. +|++ ...+.|..
T Consensus 87 ----~P--t~~~~~-~g~~~~~~~~~G~~ 108 (504)
T 2b5e_A 87 ----FP--SLKIFK-NSDVNNSIDYEGPR 108 (504)
T ss_dssp ----SS--EEEEEE-TTCTTCEEECCSCC
T ss_pred ----CC--EEEEEe-CCccccceeecCCC
Confidence 99 888885 6775 66777753
No 214
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.89 E-value=1.1e-08 Score=77.98 Aligned_cols=69 Identities=9% Similarity=0.123 Sum_probs=55.0
Q ss_pred CCCcEEEEEEcC-------CCChhhHHHHHHHHHHHHHHHH----cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCCh
Q 028030 93 KGKPVVVYFYPA-------DETPGCTKQACAFRDSYEKFKK----AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGN 161 (215)
Q Consensus 93 ~gk~~ll~f~~a-------~~C~~C~~~~~~l~~l~~~~~~----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~ 161 (215)
++.++||+|| | .||++|+...|.+++++++|.. ..+.|.-|.+ |++.
T Consensus 36 ~~~~vvV~F~-A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~---------------------d~~~ 93 (178)
T 3ga4_A 36 PGYFNILYIT-MRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDV---------------------NEVP 93 (178)
T ss_dssp TTCEEEEEEE-CCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEET---------------------TTCH
T ss_pred CCCcEEEEEe-CCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEEC---------------------ccCH
Confidence 3568999999 7 4999999999999999999973 2377777765 5567
Q ss_pred hHHHHhCCCccCCCCCCccEEEEEcCCCc
Q 028030 162 KVRKEWGVPADFFGSLPGRQTYILDKNGV 190 (215)
Q Consensus 162 ~~~~~~g~~~~~~g~~p~~~~~lid~~G~ 190 (215)
+++..||+.. +| +++++-+.+.
T Consensus 94 ~la~~~~I~s-----iP--tl~~F~~g~~ 115 (178)
T 3ga4_A 94 QLVKDLKLQN-----VP--HLVVYPPAES 115 (178)
T ss_dssp HHHHHTTCCS-----SC--EEEEECCCCG
T ss_pred HHHHHcCCCC-----CC--EEEEEcCCCC
Confidence 8889999997 89 7777755443
No 215
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.87 E-value=6.1e-09 Score=87.41 Aligned_cols=85 Identities=14% Similarity=0.237 Sum_probs=64.7
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHH-------HHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 028030 93 KGKPVVVYFYPADETPGCTKQACA-------FRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRK 165 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~-------l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 165 (215)
.++++||+|| |+||+ |+..+|. +.++++++++.++.++.|..+. +.++.+
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~---------------------~~~l~~ 83 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK---------------------EAKLAK 83 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT---------------------THHHHH
T ss_pred hCCeEEEEEE-CCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC---------------------CHHHHH
Confidence 4689999999 99999 9888888 7888888877678898888643 456888
Q ss_pred HhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 166 EWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 166 ~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
.||+.+ +| +++++ ++|++ ..+.|..+ .+++.+.++
T Consensus 84 ~~~v~~-----~P--t~~~~-~~g~~-~~~~G~~~----~~~l~~~i~ 118 (350)
T 1sji_A 84 KLGFDE-----EG--SLYVL-KGDRT-IEFDGEFA----ADVLVEFLL 118 (350)
T ss_dssp HHTCCS-----TT--EEEEE-ETTEE-EEECSCCC----HHHHHHHHH
T ss_pred hcCCCc-----cc--eEEEE-ECCcE-EEecCCCC----HHHHHHHHH
Confidence 999997 99 88888 78884 46667432 344544443
No 216
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.87 E-value=4.9e-09 Score=88.09 Aligned_cols=87 Identities=22% Similarity=0.292 Sum_probs=66.3
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc-CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKA-GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
.+|+++|.|| ++||++|+...|.+.+++++++++ ++.++.|..+.. ....|++..
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~-----------------------~~~~~~v~~ 321 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN-----------------------EVEAVKVHS 321 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC-----------------------BCSSCCCCS
T ss_pred CCCcEEEEEe-cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc-----------------------chhhcCCcc
Confidence 5799999999 999999999999999999999865 466666654321 134678876
Q ss_pred cCCCCCCccEEEEEcCC-CcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 172 DFFGSLPGRQTYILDKN-GVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~-G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+| ++++++++ |+....+.|. ...+++++.|++
T Consensus 322 -----~P--t~~~~~~~~~~~~~~~~G~----~~~~~l~~~l~~ 354 (361)
T 3uem_A 322 -----FP--TLKFFPASADRTVIDYNGE----RTLDGFKKFLES 354 (361)
T ss_dssp -----SS--EEEEECSSSSCCCEECCSC----SSHHHHHHHHTT
T ss_pred -----cC--eEEEEECCCCcceeEecCC----CCHHHHHHHHHh
Confidence 89 99999655 5666677773 446777777765
No 217
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.85 E-value=6e-09 Score=90.90 Aligned_cols=77 Identities=14% Similarity=0.242 Sum_probs=64.1
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.|+++||.|| ++||++|+...|.+.++++++++. +.++.|..+ .+..+.+.||+..
T Consensus 20 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~---------------------~~~~l~~~~~v~~- 75 (481)
T 3f8u_A 20 SAGLMLVEFF-APWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCT---------------------ANTNTCNKYGVSG- 75 (481)
T ss_dssp SSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETT---------------------TCHHHHHHTTCCE-
T ss_pred CCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECC---------------------CCHHHHHhcCCCC-
Confidence 3489999999 999999999999999999999875 888888764 3457888999987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| +++++ ++|+++..+.|...
T Consensus 76 ----~P--tl~~~-~~g~~~~~~~G~~~ 96 (481)
T 3f8u_A 76 ----YP--TLKIF-RDGEEAGAYDGPRT 96 (481)
T ss_dssp ----ES--EEEEE-ETTEEEEECCSCSS
T ss_pred ----CC--EEEEE-eCCceeeeecCccC
Confidence 89 66666 78988888888543
No 218
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.84 E-value=2.1e-09 Score=76.22 Aligned_cols=81 Identities=12% Similarity=0.046 Sum_probs=55.1
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHH-HcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFK-KAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~-~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
+...+||+|| +.||++|+..-+.+...++... .+.+.++-|.+++. ....++..|++..
T Consensus 17 ~~~~~LV~F~-A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~-------------------~~~~la~~~~V~g 76 (116)
T 3dml_A 17 KAELRLLMFE-QPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDP-------------------LPPGLELARPVTF 76 (116)
T ss_dssp --CEEEEEEE-CTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSC-------------------CCTTCBCSSCCCS
T ss_pred cCCCEEEEEE-CCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCC-------------------CchhHHHHCCCCC
Confidence 4468999999 9999999988765554432211 11356666655432 1235666778876
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeCCCCC
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNNQFQP 201 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g~~~~ 201 (215)
+| ++++++ +|+.+.+..|....
T Consensus 77 -----~P--T~i~f~-~G~ev~Ri~G~~~~ 98 (116)
T 3dml_A 77 -----TP--TFVLMA-GDVESGRLEGYPGE 98 (116)
T ss_dssp -----SS--EEEEEE-TTEEEEEEECCCCH
T ss_pred -----CC--EEEEEE-CCEEEeeecCCCCH
Confidence 88 899998 99999999986543
No 219
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.84 E-value=1e-08 Score=94.56 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=64.4
Q ss_pred cCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhC
Q 028030 89 LSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWG 168 (215)
Q Consensus 89 l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 168 (215)
+.++.|++++|.|| ++||++|+..+|.+.++++++++ ++.++.|+.++. ..+.+.||
T Consensus 450 ~~~~~~~~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~---------------------~~~~~~~~ 506 (780)
T 3apo_A 450 FPASDKEPWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIH---------------------EGLCNMYN 506 (780)
T ss_dssp SCTTCCSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC---------------------HHHHHHTT
T ss_pred HHHcCCCeEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCC---------------------HHHHHHcC
Confidence 34457899999999 99999999999999999999985 499999987533 34788899
Q ss_pred CCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 169 VPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 169 ~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+.. +| ++++++ +|++ ..+.|..
T Consensus 507 v~~-----~P--t~~~~~-~g~~-~~~~g~~ 528 (780)
T 3apo_A 507 IQA-----YP--TTVVFN-QSSI-HEYEGHH 528 (780)
T ss_dssp CCS-----SS--EEEEEE-TTEE-EEECSCS
T ss_pred CCc-----CC--eEEEEc-CCce-eeecCcc
Confidence 987 89 888884 6877 5666754
No 220
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.83 E-value=1e-08 Score=80.62 Aligned_cols=72 Identities=15% Similarity=0.068 Sum_probs=56.3
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
++++|++|| ++||++|+...|.+++++.+++ ++.++.|..+ .+.++.+.|++..
T Consensus 136 ~~~~~v~F~-a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~---------------------~~~~l~~~~~v~~-- 189 (229)
T 2ywm_A 136 IPIEIWVFV-TTSCGYCPSAAVMAWDFALAND--YITSKVIDAS---------------------ENQDLAEQFQVVG-- 189 (229)
T ss_dssp SCEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGG---------------------GCHHHHHHTTCCS--
T ss_pred CCeEEEEEE-CCCCcchHHHHHHHHHHHHHCC--CeEEEEEECC---------------------CCHHHHHHcCCcc--
Confidence 455688999 9999999999999999998883 6888888754 3456888999987
Q ss_pred CCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 174 FGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+| ++++ +|++ ..+.|..+
T Consensus 190 ---~P--t~~~---~G~~-~~~~G~~~ 207 (229)
T 2ywm_A 190 ---VP--KIVI---NKGV-AEFVGAQP 207 (229)
T ss_dssp ---SS--EEEE---GGGT-EEEESCCC
T ss_pred ---cC--EEEE---CCEE-EEeeCCCC
Confidence 99 6665 7884 55777543
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.76 E-value=8.6e-09 Score=95.08 Aligned_cols=74 Identities=15% Similarity=0.042 Sum_probs=61.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.||++||+|| ++||++|+...|.+.++++++++ ++.++.|..+. ...+.+.||+..
T Consensus 674 ~~~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v~~- 729 (780)
T 3apo_A 674 GKTHWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQA---------------------YPQTCQKAGIKA- 729 (780)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT---------------------CHHHHHHTTCCS-
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCC---------------------CHHHHHhcCCCc-
Confidence 4789999999 99999999999999999999976 48999988643 446778899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
+| +++++ ++|+++..+.|
T Consensus 730 ----~P--t~~~~-~~g~~~~~~~G 747 (780)
T 3apo_A 730 ----YP--SVKLY-QYERAKKSIWE 747 (780)
T ss_dssp ----SS--EEEEE-EEETTTTEEEE
T ss_pred ----CC--EEEEE-cCCCccccccC
Confidence 99 88888 78887766555
No 222
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.75 E-value=1.5e-08 Score=87.98 Aligned_cols=69 Identities=17% Similarity=0.336 Sum_probs=57.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc-C------cEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKA-G------AEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRK 165 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~-~------v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 165 (215)
.+|++||+|| ++||++|+...|.+.++++++++. + +.|+.|+.| .+.++.+
T Consensus 41 ~~k~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d---------------------~~~~la~ 98 (470)
T 3qcp_A 41 PLCPWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA---------------------SEVDLCR 98 (470)
T ss_dssp GGSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT---------------------TCHHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC---------------------CCHHHHH
Confidence 3589999999 999999999999999999998743 2 888888864 3456888
Q ss_pred HhCCCccCCCCCCccEEEEEcCCCc
Q 028030 166 EWGVPADFFGSLPGRQTYILDKNGV 190 (215)
Q Consensus 166 ~~g~~~~~~g~~p~~~~~lid~~G~ 190 (215)
.|++.. +| ++++++++|.
T Consensus 99 ~y~V~~-----~P--Tlilf~~gg~ 116 (470)
T 3qcp_A 99 KYDINF-----VP--RLFFFYPRDS 116 (470)
T ss_dssp HTTCCS-----SC--EEEEEEESSC
T ss_pred HcCCCc-----cC--eEEEEECCCc
Confidence 899987 89 8888876553
No 223
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.74 E-value=2.6e-08 Score=76.57 Aligned_cols=43 Identities=19% Similarity=0.202 Sum_probs=37.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
.|+++|+.|| ..||++|....+.+.++.+++++ ++.+..+.++
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEE-CCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 4789999999 99999999999999999988876 5888887764
No 224
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.69 E-value=1.9e-08 Score=78.91 Aligned_cols=106 Identities=18% Similarity=0.153 Sum_probs=65.7
Q ss_pred eecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC----CH----------------HHHHHHH
Q 028030 87 VSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD----DS----------------SSHKAFA 146 (215)
Q Consensus 87 ~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d----~~----------------~~~~~~~ 146 (215)
+.+....||++|++|| ..|||+|++..+.|.++.+ .+++++.+... .+ ..+.+++
T Consensus 79 ~~~g~~~~k~~vv~F~-d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~ 153 (216)
T 1eej_A 79 IVYKAPQEKHVITVFT-DITCGYCHKLHEQMADYNA----LGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVM 153 (216)
T ss_dssp EEECCTTCCEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHH
T ss_pred eeecCCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHh----CCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHH
Confidence 4455556899999999 9999999999999988754 26787766431 11 1233333
Q ss_pred HHcCCCe---EEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHH
Q 028030 147 KKYRLPY---TLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLK 210 (215)
Q Consensus 147 ~~~~~~~---~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~ 210 (215)
...++++ ....+.+.++...||+.+ +| +++ + .||+. ..|..+ .+.++++++
T Consensus 154 ~~~~~~~~~~~~~v~~~~~l~~~~gV~g-----tP--t~v-~-~dG~~---~~G~~~-~~~l~~~l~ 207 (216)
T 1eej_A 154 AGKSVAPASCDVDIADHYALGVQLGVSG-----TP--AVV-L-SNGTL---VPGYQP-PKEMKEFLD 207 (216)
T ss_dssp TTCCCCCCCCSCCHHHHHHHHHHHTCCS-----SS--EEE-C-TTSCE---EESCCC-HHHHHHHHH
T ss_pred hCCCCChhHHHHHHHHHHHHHHHcCCCc-----cC--EEE-E-cCCeE---ecCCCC-HHHHHHHHH
Confidence 3333332 122345567889999998 89 654 4 35653 345332 233444443
No 225
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.65 E-value=3.6e-08 Score=86.53 Aligned_cols=85 Identities=18% Similarity=0.376 Sum_probs=60.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc--CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKA--GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
.+|++||+|| ++||++|+...|.+.+++++++.. ++.++.|..+. + .... |++.
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~---------------------~-~~~~-~~v~ 430 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE---------------------N-DVRG-VVIE 430 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG---------------------C-CCSS-CCCS
T ss_pred CCCCEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc---------------------c-cccc-CCce
Confidence 4799999999 999999999999999999999832 57777675421 1 1223 7787
Q ss_pred ccCCCCCCccEEEEEcCCCcE--EEEEeCCCCCCccHHHHHHHHh
Q 028030 171 ADFFGSLPGRQTYILDKNGVV--QLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~G~v--~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+ +| +++++ ++|+. ...+.|.. ..+++++.|+
T Consensus 431 ~-----~P--t~~~~-~~G~~~~~~~~~G~~----~~~~l~~~i~ 463 (504)
T 2b5e_A 431 G-----YP--TIVLY-PGGKKSESVVYQGSR----SLDSLFDFIK 463 (504)
T ss_dssp S-----SS--EEEEE-CCTTSCCCCBCCSCC----CHHHHHHHHH
T ss_pred e-----cC--eEEEE-eCCceecceEecCCC----CHHHHHHHHH
Confidence 6 89 77777 78875 45566643 3444554443
No 226
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.63 E-value=2.7e-08 Score=76.30 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=36.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
.++++|++|| ..|||+|....+.|.++.+++++ ++.+..+..
T Consensus 24 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELF-WYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 5789999999 99999999999999999988876 577776654
No 227
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.57 E-value=3.2e-07 Score=77.47 Aligned_cols=76 Identities=13% Similarity=0.210 Sum_probs=57.5
Q ss_pred CCCcEEEEEEcCCCChhhHHHH------HHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 028030 93 KGKPVVVYFYPADETPGCTKQA------CAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKE 166 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~------~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 166 (215)
.++++||.|| |+||++|...- |.+.++++.+++.++.+..|.++ .+..+.+.
T Consensus 29 ~~~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~---------------------~~~~l~~~ 86 (367)
T 3us3_A 29 KYEVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSE---------------------KDAAVAKK 86 (367)
T ss_dssp HCSEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETT---------------------TTHHHHHH
T ss_pred hCCeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCc---------------------ccHHHHHH
Confidence 3689999999 99999974222 47778888887667888888764 44578899
Q ss_pred hCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 167 WGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 167 ~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
||+.+ +| +++++. +|+++ .+.|..
T Consensus 87 ~~V~~-----~P--Tl~~f~-~G~~~-~y~G~~ 110 (367)
T 3us3_A 87 LGLTE-----ED--SIYVFK-EDEVI-EYDGEF 110 (367)
T ss_dssp HTCCS-----TT--EEEEEE-TTEEE-ECCSCC
T ss_pred cCCCc-----Cc--eEEEEE-CCcEE-EeCCCC
Confidence 99997 99 777775 78875 566643
No 228
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.52 E-value=6.7e-07 Score=69.87 Aligned_cols=78 Identities=14% Similarity=0.147 Sum_probs=57.6
Q ss_pred cCCCcEEEEEEcCC-CChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 92 FKGKPVVVYFYPAD-ETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 92 ~~gk~~ll~f~~a~-~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
..++++|++|| +. ||++|+...+.+.++++. . .++.++.|..|+++ +.++...||+.
T Consensus 20 ~~~~v~lv~f~-~~~~C~~C~~~~~~~~~la~~-~-~~v~~~~vd~~~~~-------------------~~~~~~~~~v~ 77 (226)
T 1a8l_A 20 MVNPVKLIVFV-RKDHCQYCDQLKQLVQELSEL-T-DKLSYEIVDFDTPE-------------------GKELAKRYRID 77 (226)
T ss_dssp CCSCEEEEEEE-CSSSCTTHHHHHHHHHHHHTT-C-TTEEEEEEETTSHH-------------------HHHHHHHTTCC
T ss_pred cCCCeEEEEEe-cCCCCchhHHHHHHHHHHHhh-C-CceEEEEEeCCCcc-------------------cHHHHHHcCCC
Confidence 45677889999 99 999999999999998754 2 25888888876543 24678889998
Q ss_pred ccCCCCCCccEEEEEcCCCcEE-EEEeCCC
Q 028030 171 ADFFGSLPGRQTYILDKNGVVQ-LIYNNQF 199 (215)
Q Consensus 171 ~~~~g~~p~~~~~lid~~G~v~-~~~~g~~ 199 (215)
. +| +++++ ++|+.. ..+.|..
T Consensus 78 ~-----~P--t~~~~-~~g~~~~~~~~G~~ 99 (226)
T 1a8l_A 78 R-----AP--ATTIT-QDGKDFGVRYFGLP 99 (226)
T ss_dssp S-----SS--EEEEE-ETTBCCSEEEESCC
T ss_pred c-----Cc--eEEEE-cCCceeeEEEeccC
Confidence 7 89 77766 566532 4566643
No 229
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.52 E-value=2.1e-07 Score=67.24 Aligned_cols=74 Identities=11% Similarity=0.113 Sum_probs=57.4
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.+++++|+|| ++ |++|+...|.|.+++++|+++ +.|+.|+. |+...++..||+...
T Consensus 22 ~~~pv~v~f~-a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~---------------------d~~~~~a~~~gi~~~ 77 (133)
T 2djk_A 22 AGIPLAYIFA-ET-AEERKELSDKLKPIAEAQRGV-INFGTIDA---------------------KAFGAHAGNLNLKTD 77 (133)
T ss_dssp TTSCEEEEEC-SC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECT---------------------TTTGGGTTTTTCCSS
T ss_pred CCCCEEEEEe-cC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEch---------------------HHhHHHHHHcCCCcc
Confidence 3578999999 88 789999999999999999865 88888875 344567888999752
Q ss_pred CCCCCCccEEEEEcC-CCcEEEEEe
Q 028030 173 FFGSLPGRQTYILDK-NGVVQLIYN 196 (215)
Q Consensus 173 ~~g~~p~~~~~lid~-~G~v~~~~~ 196 (215)
.+| ++++++. +|+. +...
T Consensus 78 ---~iP--tl~i~~~~~g~~-~~~~ 96 (133)
T 2djk_A 78 ---KFP--AFAIQEVAKNQK-FPFD 96 (133)
T ss_dssp ---SSS--EEEEECTTTCCB-CCCC
T ss_pred ---cCC--EEEEEecCcCcc-cCCC
Confidence 278 8888864 5777 4443
No 230
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.48 E-value=6.6e-08 Score=74.14 Aligned_cols=87 Identities=15% Similarity=0.103 Sum_probs=63.9
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC-----------------------------------
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD----------------------------------- 137 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d----------------------------------- 137 (215)
.++++|++|| ..|||+|....+.|.++.++++. ++.+..+.+.
T Consensus 21 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~ 98 (195)
T 2znm_A 21 SGKIEVLEFF-GYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQ 98 (195)
T ss_dssp SSSEEEEEEE-CTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEEE-CCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHh
Confidence 4789999999 99999999999999999988865 4777777642
Q ss_pred -----CHHHHHHHHHHc-CCCeEEE------------EcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcE
Q 028030 138 -----DSSSHKAFAKKY-RLPYTLL------------SDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVV 191 (215)
Q Consensus 138 -----~~~~~~~~~~~~-~~~~~~~------------~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v 191 (215)
+.+.+.+++++. |++...+ .+.+.++...+|+.+ +| + |+|| |+.
T Consensus 99 ~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g-----tP--t-~vin--g~~ 160 (195)
T 2znm_A 99 KIRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDS-----TP--T-VIVG--GKY 160 (195)
T ss_dssp SSCTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCS-----SS--E-EEET--TTE
T ss_pred CCCCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC-----CC--e-EEEC--CEE
Confidence 345566677777 7764321 223455677889987 89 5 6774 664
No 231
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.43 E-value=9.7e-07 Score=70.30 Aligned_cols=100 Identities=12% Similarity=0.093 Sum_probs=61.8
Q ss_pred eecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC----C-HHHH---------HHHHHH----
Q 028030 87 VSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD----D-SSSH---------KAFAKK---- 148 (215)
Q Consensus 87 ~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d----~-~~~~---------~~~~~~---- 148 (215)
+.+..-.+|++|++|| ..|||+|++..+.+.++.++ .+++|+.+... + .... .++.+.
T Consensus 90 i~~G~~~ak~~v~~F~-D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~ 165 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFA-DPFCPYCKQFWQQARPWVDS---GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEAS 165 (241)
T ss_dssp EEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHT---TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHT
T ss_pred ceECCCCCCeEEEEEE-CCCChhHHHHHHHHHHHHhC---CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4444446789999999 99999999999999887654 24777665431 1 1111 111111
Q ss_pred cC---CC--------eEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 149 YR---LP--------YTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 149 ~~---~~--------~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+. +. .....+.+.++.+.+|+.+ +| ++++.|.+|++ ....|.
T Consensus 166 ~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~g-----tP--t~vi~~~~G~~-~~~~G~ 218 (241)
T 1v58_A 166 GGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANV-----TP--AIYYMSKENTL-QQAVGL 218 (241)
T ss_dssp TTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCS-----SC--EEEEEETTTEE-EEEESS
T ss_pred hccCCCCccccCCHHHHHHHHHHHHHHHHcCCCC-----CC--EEEEECCCCCE-EEecCC
Confidence 11 11 0001223456788899987 88 88888888976 455664
No 232
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.41 E-value=1.4e-06 Score=68.33 Aligned_cols=80 Identities=10% Similarity=-0.016 Sum_probs=58.0
Q ss_pred CCCcEEEEE----EcCCCChhhHHHHHHHHHHHHHHHH-cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHh
Q 028030 93 KGKPVVVYF----YPADETPGCTKQACAFRDSYEKFKK-AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEW 167 (215)
Q Consensus 93 ~gk~~ll~f----~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (215)
.+.++|++| | +.||++|+..+|.+.++++++.+ ..+.+..|.. |.+.++...|
T Consensus 20 ~~~v~v~~~~~~~~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~---------------------~~~~~l~~~~ 77 (229)
T 2ywm_A 20 KEPVSIKLFSQAIG-CESCQTAEELLKETVEVIGEAVGQDKIKLDIYSP---------------------FTHKEETEKY 77 (229)
T ss_dssp CSCEEEEEECCCTT-CGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECT---------------------TTCHHHHHHT
T ss_pred cCCeEEEEEccCCC-CcccHHHHHHHHHHHHHHhccCCCCceEEEEecC---------------------cccHHHHHHc
Confidence 344455555 4 67899999999999999888843 2477777754 4567889999
Q ss_pred CCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCC
Q 028030 168 GVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPE 202 (215)
Q Consensus 168 g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~ 202 (215)
|+.. +| ++++++ +|+....+.|....+
T Consensus 78 ~v~~-----~P--tl~~~~-~~~~~~~~~G~~~~~ 104 (229)
T 2ywm_A 78 GVDR-----VP--TIVIEG-DKDYGIRYIGLPAGL 104 (229)
T ss_dssp TCCB-----SS--EEEEES-SSCCCEEEESCCCTT
T ss_pred CCCc-----Cc--EEEEEC-CCcccceecCCccHH
Confidence 9997 99 777775 666666777754333
No 233
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.36 E-value=5e-06 Score=62.44 Aligned_cols=49 Identities=14% Similarity=0.041 Sum_probs=39.3
Q ss_pred eecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc-CcEEEEEeC
Q 028030 87 VSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKA-GAEVIGISG 136 (215)
Q Consensus 87 ~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~ 136 (215)
+.+.+..++++|++|+ ..+||+|....+.+.++.++|.+. +++++....
T Consensus 20 ~~~G~~~a~v~i~~f~-D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFI-NVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp EEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred cccCCCCCCeEEEEEE-CCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 4555557889999999 999999999999999998888433 478777654
No 234
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.36 E-value=7.4e-07 Score=68.00 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=35.5
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
.++++|++|| ..+||+|....+.+.++.++++. ++.+..+..
T Consensus 24 ~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIF-GYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 5788999999 99999999999999999888765 477776654
No 235
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.34 E-value=4.7e-07 Score=70.67 Aligned_cols=38 Identities=18% Similarity=0.187 Sum_probs=30.8
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEe
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGIS 135 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs 135 (215)
.+|++|++|| ..|||+|++..+.|.++.+ .|+++..+.
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~ 122 (211)
T 1t3b_A 85 NEKHVVTVFM-DITCHYCHLLHQQLKEYND----LGITVRYLA 122 (211)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEE
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHh----CCcEEEEEE
Confidence 5789999999 9999999999999988643 257776543
No 236
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.33 E-value=5.4e-07 Score=60.42 Aligned_cols=58 Identities=12% Similarity=0.172 Sum_probs=40.6
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSL 177 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~ 177 (215)
|+.|| ++||++|+...+.|.++..++ +.-|++ |.+.++...||+. +
T Consensus 3 vv~f~-a~~C~~C~~~~~~L~~~~~~~------~~~vdi---------------------d~~~~l~~~~g~~------v 48 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQAVEALAQARAGA------FFSVFI---------------------DDDAALESAYGLR------V 48 (87)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHTTCCC------EEEEEC---------------------TTCHHHHHHHTTT------C
T ss_pred EEEEE-CCCCchHHHHHHHHHHHHHhh------eEEEEC---------------------CCCHHHHHHhCCC------c
Confidence 78899 999999999988887763221 344544 3445577778874 8
Q ss_pred CccEEEEEcCCCcEEE
Q 028030 178 PGRQTYILDKNGVVQL 193 (215)
Q Consensus 178 p~~~~~lid~~G~v~~ 193 (215)
| .++ + .+|+.+.
T Consensus 49 P--tl~-~-~~G~~v~ 60 (87)
T 1ttz_A 49 P--VLR-D-PMGRELD 60 (87)
T ss_dssp S--EEE-C-TTCCEEE
T ss_pred C--eEE-E-ECCEEEe
Confidence 9 444 4 7899874
No 237
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.33 E-value=2.4e-06 Score=59.47 Aligned_cols=63 Identities=13% Similarity=0.127 Sum_probs=46.6
Q ss_pred cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCC
Q 028030 96 PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFG 175 (215)
Q Consensus 96 ~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g 175 (215)
..|+.|| +.||++|+...+.|.++.+++ ++.+.-|.+|+ +.++...||+.
T Consensus 30 ~~vv~y~-~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~---------------------d~~l~~~ygv~----- 79 (107)
T 2fgx_A 30 RKLVVYG-REGCHLCEEMIASLRVLQKKS---WFELEVINIDG---------------------NEHLTRLYNDR----- 79 (107)
T ss_dssp CCEEEEE-CSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTT---------------------CHHHHHHSTTS-----
T ss_pred cEEEEEe-CCCChhHHHHHHHHHHHHHhc---CCeEEEEECCC---------------------CHHHHHHhCCC-----
Confidence 5789999 999999999999999987664 47777776643 33455667764
Q ss_pred CCCccEEEEEcCCCcEE
Q 028030 176 SLPGRQTYILDKNGVVQ 192 (215)
Q Consensus 176 ~~p~~~~~lid~~G~v~ 192 (215)
+| .++++ .+|+++
T Consensus 80 -VP--~l~~~-~dG~~v 92 (107)
T 2fgx_A 80 -VP--VLFAV-NEDKEL 92 (107)
T ss_dssp -CS--EEEET-TTTEEE
T ss_pred -Cc--eEEEE-ECCEEE
Confidence 88 54434 688886
No 238
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.32 E-value=5.1e-07 Score=63.14 Aligned_cols=71 Identities=15% Similarity=0.152 Sum_probs=47.4
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCH-HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDS-SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
+++++++ || ++||++|+...+.|.++.. .+.++.|..+.. +.. ...+...||+..
T Consensus 18 ~~~~vv~-f~-a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~~~~~~-----------------~~~l~~~~~v~~ 73 (116)
T 2e7p_A 18 SSAPVVV-FS-KTYCGYCNRVKQLLTQVGA-----SYKVVELDELSDGSQL-----------------QSALAHWTGRGT 73 (116)
T ss_dssp TSSSEEE-EE-CTTCHHHHHHHHHHHHHTC-----CCEEEEGGGSTTHHHH-----------------HHHHHHHHSCCS
T ss_pred cCCCEEE-EE-CCCChhHHHHHHHHHHcCC-----CeEEEEccCCCChHHH-----------------HHHHHHHhCCCC
Confidence 4566666 99 9999999999998887732 245555544332 111 135777889876
Q ss_pred cCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 172 DFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 172 ~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
+| ++ ++ +|+++..+.+
T Consensus 74 -----~P--t~-~~--~g~~v~~~~~ 89 (116)
T 2e7p_A 74 -----VP--NV-FI--GGKQIGGCDT 89 (116)
T ss_dssp -----SC--EE-EE--TTEEEECHHH
T ss_pred -----cC--EE-EE--CCEEECChHH
Confidence 89 66 44 6888776554
No 239
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.21 E-value=8.6e-06 Score=71.82 Aligned_cols=68 Identities=16% Similarity=0.123 Sum_probs=54.5
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
.++..+++|| +.||++|+...|.|+++..+++ ++.+..|..| ...++...|++..
T Consensus 116 ~~~~~i~~f~-a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~---------------------~~~~~~~~~~i~s- 170 (521)
T 1hyu_A 116 DGDFEFETYY-SLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGG---------------------TFQNEITERNVMG- 170 (521)
T ss_dssp CSCEEEEEEE-CTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETT---------------------TCHHHHHHTTCCS-
T ss_pred CCCcceEEEE-CCCCcCcHHHHHHHHHHHhHcC--ceEEEEEech---------------------hhHHHHHHhCCCc-
Confidence 3567899999 9999999999999999988876 5888777653 4557888899987
Q ss_pred CCCCCCccEEEEEcCCCcEEEE
Q 028030 173 FFGSLPGRQTYILDKNGVVQLI 194 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~ 194 (215)
+| ++++ +|+.+..
T Consensus 171 ----vP--t~~i---~g~~~~~ 183 (521)
T 1hyu_A 171 ----VP--AVFV---NGKEFGQ 183 (521)
T ss_dssp ----SS--EEEE---TTEEEEE
T ss_pred ----cC--EEEE---CCEEEec
Confidence 99 6655 8888754
No 240
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.15 E-value=1e-05 Score=64.33 Aligned_cols=88 Identities=16% Similarity=0.247 Sum_probs=61.5
Q ss_pred CCCcEEEEEEcC--CCChhhHHHHHHHHHHHHHHHH-cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 93 KGKPVVVYFYPA--DETPGCTKQACAFRDSYEKFKK-AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 93 ~gk~~ll~f~~a--~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
.++++||.|| + +||+ ..|.+.++++++.+ .++.|..|.+|+.. .+.+.++...|++
T Consensus 21 ~~~~vlV~Fy-A~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g----------------~~~~~~l~~~~~V 79 (240)
T 2qc7_A 21 KSKFVLVKFD-TQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYG----------------DKLNMELSEKYKL 79 (240)
T ss_dssp GCSEEEEEEC-CSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSS----------------SCCSHHHHHHTTC
T ss_pred CCCCEEEEEe-CCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCccc----------------chhhHHHHHHcCC
Confidence 3578999999 9 9998 88999999998874 35888888765410 0135678899999
Q ss_pred C--ccCCCCCCccEEEEEcCCCc--EEEEEeCCCCCCccHHHHHHHHh
Q 028030 170 P--ADFFGSLPGRQTYILDKNGV--VQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 170 ~--~~~~g~~p~~~~~lid~~G~--v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
. . +| +++++ ++|+ ....+.|.. ..+++.+.|+
T Consensus 80 ~~~~-----~P--Tl~~f-~~G~~~~~~~y~G~~----~~~~L~~fi~ 115 (240)
T 2qc7_A 80 DKES-----YP--VFYLF-RDGDFENPVPYTGAV----KVGAIQRWLK 115 (240)
T ss_dssp CGGG-----CS--EEEEE-ETTCSSCCEECCSCS----CHHHHHHHHH
T ss_pred CCCC-----CC--EEEEE-eCCCcCcceeecCCC----CHHHHHHHHH
Confidence 9 7 99 77777 5676 344566643 3345555544
No 241
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.14 E-value=2.1e-06 Score=56.18 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=44.5
Q ss_pred EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCC
Q 028030 97 VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGS 176 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~ 176 (215)
.++.|| ++||++|+...+.|.++.+++ ++.+..+.+|.. ....++.+.||+..
T Consensus 3 ~~~~f~-~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~------------------~~~~~~~~~~gv~~----- 55 (80)
T 2k8s_A 3 SKAIFY-HAGCPVCVSAEQAVANAIDPS---KYTVEIVHLGTD------------------KARIAEAEKAGVKS----- 55 (80)
T ss_dssp EEEEEE-ECSCHHHHHHHHHHHHHSCTT---TEEEEEEETTTC------------------SSTHHHHHHHTCCE-----
T ss_pred ceEEEe-CCCCCchHHHHHHHHHHHHhc---CCeEEEEEecCC------------------hhhHHHHHHcCCCc-----
Confidence 467788 999999999999998876543 445444444321 02346677888886
Q ss_pred CCccEEEEEcCCCcEEE
Q 028030 177 LPGRQTYILDKNGVVQL 193 (215)
Q Consensus 177 ~p~~~~~lid~~G~v~~ 193 (215)
+| +++ + +|+++.
T Consensus 56 vP--t~~-i--~g~~~~ 67 (80)
T 2k8s_A 56 VP--ALV-I--DGAAFH 67 (80)
T ss_dssp EE--EEE-E--TTEEEE
T ss_pred CC--EEE-E--CCEEEE
Confidence 88 554 4 788764
No 242
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.11 E-value=8.3e-06 Score=53.51 Aligned_cols=65 Identities=12% Similarity=0.113 Sum_probs=46.4
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhC--CCccCCC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWG--VPADFFG 175 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g--~~~~~~g 175 (215)
|+.|+ ++||++|+...+.|.++.++++ ++.+..+.++... +...++.+.+| +..
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~~~~-----------------~~~~~l~~~~~~~~~~---- 58 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIRAEG-----------------ITKEDLQQKAGKPVET---- 58 (85)
T ss_dssp EEEEC-CTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHHHHT-----------------CCSHHHHHHTCCCSCC----
T ss_pred EEEEe-CCCCCCHHHHHHHHHHHHhcCC--CceEEEEecccCh-----------------HHHHHHHHHhCCCCce----
Confidence 67788 9999999999999999887764 6888888653321 11235677777 555
Q ss_pred CCCccEEEEEcCCCcEE
Q 028030 176 SLPGRQTYILDKNGVVQ 192 (215)
Q Consensus 176 ~~p~~~~~lid~~G~v~ 192 (215)
+| .+ ++ +|+.+
T Consensus 59 -vP--~i-~~--~g~~i 69 (85)
T 1ego_A 59 -VP--QI-FV--DQQHI 69 (85)
T ss_dssp -SC--EE-EE--TTEEE
T ss_pred -eC--eE-EE--CCEEE
Confidence 89 55 45 57764
No 243
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.10 E-value=4.8e-06 Score=57.09 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=45.4
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
.+++|+.|| +.||++|+...+.|.++. +++.+.-|.+|++ ++.++...|| ..
T Consensus 15 ~~~~v~~f~-~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~-------------------~~~el~~~~g-~~-- 66 (100)
T 1wjk_A 15 ALPVLTLFT-KAPCPLCDEAKEVLQPYK-----DRFILQEVDITLP-------------------ENSTWYERYK-FD-- 66 (100)
T ss_dssp CCCEEEEEE-CSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSS-------------------TTHHHHHHSS-SS--
T ss_pred CCCEEEEEe-CCCCcchHHHHHHHHHhh-----hCCeEEEEECCCc-------------------chHHHHHHHC-CC--
Confidence 467888999 999999999988887653 2478888877632 2346677888 65
Q ss_pred CCCCCccEEEEEcCCCcEE
Q 028030 174 FGSLPGRQTYILDKNGVVQ 192 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~v~ 192 (215)
+| . +++ +|+++
T Consensus 67 ---vP--~-l~~--~g~~~ 77 (100)
T 1wjk_A 67 ---IP--V-FHL--NGQFL 77 (100)
T ss_dssp ---CS--E-EEE--SSSEE
T ss_pred ---CC--E-EEE--CCEEE
Confidence 89 4 445 57765
No 244
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.02 E-value=1.1e-05 Score=61.77 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=37.1
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
.++++|+.|| ..|||+|....+.+.++.+++++ ++.+.-+.++
T Consensus 23 ~~~v~vv~f~-d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFF-GYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 4789999999 99999999999999999988877 4777777653
No 245
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.94 E-value=8.3e-05 Score=59.36 Aligned_cols=88 Identities=15% Similarity=0.162 Sum_probs=58.9
Q ss_pred CCCcEEEEEEc-CCCChhhHHHHHHHHHHHHHHHH--cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 93 KGKPVVVYFYP-ADETPGCTKQACAFRDSYEKFKK--AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 93 ~gk~~ll~f~~-a~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
.++++||.||. ++||+ ..|.+.++++++.+ .++.|.-|.+|+..+ ..+.++...|++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~----------------~~n~~la~~~~V 91 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGE----------------LENKALGDRYKV 91 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTT----------------CTTHHHHHHTTC
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccc----------------cccHHHHHHhCC
Confidence 35789999984 79998 88999999999875 357777787543100 015678899999
Q ss_pred C--ccCCCCCCccEEEEEcCCCcE--EEEE--eCCCCCCccHHHHHHHHh
Q 028030 170 P--ADFFGSLPGRQTYILDKNGVV--QLIY--NNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 170 ~--~~~~g~~p~~~~~lid~~G~v--~~~~--~g~~~~~~~~~~il~~l~ 213 (215)
. . +| +++++- |++ ...+ .|. ...+++.+.|+
T Consensus 92 ~~~~-----~P--Tl~~F~--G~~~~~~~y~~~G~----~~~~~L~~fi~ 128 (248)
T 2c0g_A 92 DDKN-----FP--SIFLFK--GNADEYVQLPSHVD----VTLDNLKAFVS 128 (248)
T ss_dssp CTTS-----CC--EEEEES--SSSSSEEECCTTSC----CCHHHHHHHHH
T ss_pred CcCC-----CC--eEEEEe--CCcCcceeecccCC----CCHHHHHHHHH
Confidence 9 7 99 777774 773 3345 553 23344555443
No 246
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.82 E-value=5.9e-06 Score=63.16 Aligned_cols=42 Identities=17% Similarity=0.283 Sum_probs=34.0
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~ 136 (215)
.++++||.|| ..|||+|....+.+ .++.+++.+ +++++.+..
T Consensus 13 ~~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 57 (189)
T 3l9v_A 13 VDAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHV 57 (189)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEec
Confidence 4689999999 99999999999986 577776765 477777654
No 247
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.81 E-value=1.6e-05 Score=65.02 Aligned_cols=86 Identities=17% Similarity=0.247 Sum_probs=54.4
Q ss_pred eecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 028030 87 VSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKE 166 (215)
Q Consensus 87 ~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 166 (215)
..+.+..++..+++|| ++||++|++..|.++++.+++ ..+-+..++. .|++.++.++
T Consensus 190 ~~la~~l~~~~vV~F~-A~WC~~Ck~l~p~le~lA~~l-----~~Vd~d~~d~-----------------~~~~~~la~~ 246 (291)
T 3kp9_A 190 VGLAAHLRQIGGTMYG-AYWCPHCQDQKELFGAAFDQV-----PYVECSPNGP-----------------GTPQAQECTE 246 (291)
T ss_dssp HHHHHHHHHTTCEEEE-CTTCHHHHHHHHHHGGGGGGS-----CEEESCSSCS-----------------SSCCCHHHHT
T ss_pred HHHHHHhCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHc-----CEEEEeecCc-----------------hhhHHHHHHH
Confidence 4444443455679999 999999999999999886443 2222221110 0336788999
Q ss_pred hCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHH
Q 028030 167 WGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFL 212 (215)
Q Consensus 167 ~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l 212 (215)
|++.. +| + +++ ||+. +.|.. ..+++.+.+
T Consensus 247 ~gI~~-----vP--T-~~i--~G~~---~~G~~----~~~~L~~~l 275 (291)
T 3kp9_A 247 AGITS-----YP--T-WII--NGRT---YTGVR----SLEALAVAS 275 (291)
T ss_dssp TTCCS-----TT--E-EEE--TTEE---EESCC----CHHHHHHHT
T ss_pred cCCcc-----cC--e-EEE--CCEE---ecCCC----CHHHHHHHH
Confidence 99997 99 5 445 6764 56632 345555544
No 248
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.76 E-value=9.4e-05 Score=58.73 Aligned_cols=72 Identities=15% Similarity=0.209 Sum_probs=51.8
Q ss_pred CCcEEEEEEcCCC--ChhhHHHHHHHHHHHHHHHH-cC---cEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHh
Q 028030 94 GKPVVVYFYPADE--TPGCTKQACAFRDSYEKFKK-AG---AEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEW 167 (215)
Q Consensus 94 gk~~ll~f~~a~~--C~~C~~~~~~l~~l~~~~~~-~~---v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (215)
+++++|.|| +.| |++|+...+.+.++++.+.+ +| +.|+.+.. |.+..+...|
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~---------------------d~~~~~~~~~ 82 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYR---------------------ESDSDKFSEF 82 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEET---------------------TTTHHHHHHT
T ss_pred CCCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecC---------------------CcCHHHHHhc
Confidence 478999999 899 99999999999999877532 12 66666653 4456788899
Q ss_pred CCCccCCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 168 GVPADFFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 168 g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
|+.. +| ++.++ +| ...+.|.
T Consensus 83 gv~~-----~P--t~~i~--~g--~~~~~G~ 102 (243)
T 2hls_A 83 KVER-----VP--TVAFL--GG--EVRWTGI 102 (243)
T ss_dssp TCCS-----SS--EEEET--TT--TEEEESC
T ss_pred CCCc-----CC--EEEEE--CC--ceeEcCC
Confidence 9986 89 55555 45 3345553
No 249
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.73 E-value=8.7e-05 Score=48.09 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=27.3
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHH
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSS 141 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~ 141 (215)
|+.|| ++||++|+...+.|.+ .|+.+..+.+|...+
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~~~~ 38 (81)
T 1h75_A 3 ITIYT-RNDCVQCHATKRAMEN-------RGFDFEMINVDRVPE 38 (81)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHH
T ss_pred EEEEc-CCCChhHHHHHHHHHH-------CCCCeEEEECCCCHH
Confidence 67788 9999999988777664 367888888775433
No 250
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.66 E-value=4.9e-05 Score=55.84 Aligned_cols=99 Identities=17% Similarity=0.290 Sum_probs=58.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEE--eC---CC--------------H-HHHHHHHHHcCCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGI--SG---DD--------------S-SSHKAFAKKYRLP 152 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v--s~---d~--------------~-~~~~~~~~~~~~~ 152 (215)
.++++|++|+ -.+||+|++..+.+.++ . +++|+.+ .. +. + +.+.+++..-+.+
T Consensus 13 ~a~~~vv~f~-D~~Cp~C~~~~~~l~~l----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~ 85 (147)
T 3gv1_A 13 NGKLKVAVFS-DPDCPFCKRLEHEFEKM----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFP 85 (147)
T ss_dssp TCCEEEEEEE-CTTCHHHHHHHHHHTTC----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCC
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHHhhc----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCC
Confidence 5789999999 99999999999988765 2 3666544 33 11 1 1233333322221
Q ss_pred --eE---EEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHH
Q 028030 153 --YT---LLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKF 211 (215)
Q Consensus 153 --~~---~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~ 211 (215)
.+ -..+.+.++++.+|+.+ +| ++++ .||++ ..|..+. +.++++++.
T Consensus 86 ~~~~~~~~~v~~~~~la~~~gI~g-----tP---t~vi-~nG~~---i~G~~~~-~~l~~~i~~ 136 (147)
T 3gv1_A 86 VGGSICDNPVAETTSLGEQFGFNG-----TP---TLVF-PNGRT---QSGYSPM-PQLEEIIRK 136 (147)
T ss_dssp TTCCCCSCSHHHHHHHHHHTTCCS-----SC---EEEC-TTSCE---EESCCCT-THHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHhCCCc-----cC---EEEE-ECCEE---eeCCCCH-HHHHHHHHH
Confidence 11 11223567889999998 99 4555 57874 4454433 345555544
No 251
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.59 E-value=4.4e-05 Score=58.08 Aligned_cols=39 Identities=13% Similarity=0.105 Sum_probs=33.1
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
++++||.|| ..|||+|....|.+.++.+++ ++.+.-+.+
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKMHI 60 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEEEC
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEEec
Confidence 689999999 999999999999999999988 355555544
No 252
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.55 E-value=0.00019 Score=45.51 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=26.2
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHH
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSS 140 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~ 140 (215)
++.|+ +.||++|+...+.|.++ |+.+..+.++...
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~~-------~i~~~~~di~~~~ 37 (75)
T 1r7h_A 3 ITLYT-KPACVQCTATKKALDRA-------GLAYNTVDISLDD 37 (75)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHT-------TCCCEEEETTTCH
T ss_pred EEEEe-CCCChHHHHHHHHHHHc-------CCCcEEEECCCCH
Confidence 56788 99999999887777653 6777777776543
No 253
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.50 E-value=0.00032 Score=58.47 Aligned_cols=70 Identities=16% Similarity=0.313 Sum_probs=52.5
Q ss_pred CcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCC
Q 028030 95 KPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFF 174 (215)
Q Consensus 95 k~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~ 174 (215)
+.++|.|+ +.||+.|+...+.+.+++++++++ +.++.|..+.. ....+.+.||+...
T Consensus 136 ~~~~v~F~-~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~-------------------~~~~~~~~fgi~~~-- 192 (361)
T 3uem_A 136 KTHILLFL-PKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHT-------------------DNQRILEFFGLKKE-- 192 (361)
T ss_dssp CEEEEEEC-CSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSG-------------------GGHHHHHHTTCCTT--
T ss_pred CcEEEEEE-eCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChH-------------------HHHHHHHHcCCCcc--
Confidence 45678888 999999999999999999999875 88888876532 23466777888631
Q ss_pred CCCCccEEEEEcCCCc
Q 028030 175 GSLPGRQTYILDKNGV 190 (215)
Q Consensus 175 g~~p~~~~~lid~~G~ 190 (215)
.+| ++++++.++.
T Consensus 193 -~~P--~~~~~~~~~~ 205 (361)
T 3uem_A 193 -ECP--AVRLITLEEE 205 (361)
T ss_dssp -TCS--EEEEEECC--
T ss_pred -CCc--cEEEEEcCCc
Confidence 278 8888876444
No 254
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.47 E-value=0.00017 Score=53.93 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=33.6
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEe
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGIS 135 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs 135 (215)
.++++||.|+ .-.||+|....+.+.++.+++.+. +.++.+.
T Consensus 20 ~~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~ 60 (184)
T 4dvc_A 20 SSSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNH 60 (184)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEE
T ss_pred CCCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEe
Confidence 4689999999 899999999999999998888764 5555543
No 255
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.47 E-value=0.001 Score=50.28 Aligned_cols=108 Identities=10% Similarity=0.079 Sum_probs=70.5
Q ss_pred CcCCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHH---
Q 028030 91 KFKGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVR--- 164 (215)
Q Consensus 91 ~~~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~--- 164 (215)
.-.+|+++|++. ++||..|...-..+ .++.+-+.+ ++.+++.++++.+..+.++...+-.+ ...+.
T Consensus 52 k~e~K~LlVyLh-s~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~e~~~~~~~~~~~~~------g~~~a~~~ 123 (178)
T 2ec4_A 52 ARDRKLLAIYLH-HDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKDSNRARFLTMCNRHF------GSVVAQTI 123 (178)
T ss_dssp TTTCCEEEEEEE-CSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSHHHHHHHHHHHHHHT------CHHHHHHH
T ss_pred hhhCcEEEEEEe-CCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCchhhhhhhhhhhhhh------HHHHHHHH
Confidence 345799999999 99999998766544 233333443 68899999888775444333211000 22333
Q ss_pred HHhCCCccCCCCCCccEEEEEcCCC---cEEEEEeCCCCCCccHHHHHHHHh
Q 028030 165 KEWGVPADFFGSLPGRQTYILDKNG---VVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 165 ~~~g~~~~~~g~~p~~~~~lid~~G---~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
+.|++.. +| ..++|+++| +|+.+..|..+.++.++.+.+.++
T Consensus 124 ~~~~~~~-----~P--~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 124 RTQKTDQ-----FP--LFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp HHSCSTT-----CS--EEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred hhcCCCC-----CC--eEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 3377776 88 999998764 788999997766665555555543
No 256
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.41 E-value=0.00034 Score=53.46 Aligned_cols=42 Identities=19% Similarity=0.360 Sum_probs=34.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~ 136 (215)
.++++|+.|+ ..+||+|....+.+ .++.+++.+ +++++.+..
T Consensus 20 ~~~~~vvef~-d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~ 64 (191)
T 3l9s_A 20 AGEPQVLEFF-SFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHV 64 (191)
T ss_dssp CSSSCEEEEE-CTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEEC
T ss_pred CCCCeEEEEE-CCCChhHHHhChhccchHHHHHhCCC-CcEEEEEec
Confidence 4689999999 99999999999987 588888876 366666553
No 257
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.40 E-value=4.1e-05 Score=59.01 Aligned_cols=43 Identities=19% Similarity=0.343 Sum_probs=37.2
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHH---HHHHHHHHHcCcEEEEEeCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAF---RDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d 137 (215)
.++++||.|| +.||++|....|.+ .++.+++++ ++.+.-+.++
T Consensus 112 ~~~~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 112 AGAPQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCEEEEEE-CCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 4689999999 99999999999998 898888875 5888887764
No 258
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.05 E-value=0.0033 Score=44.78 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=22.9
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
|+.|+ ++||++|+...+.|.++ ++.+..+.+|
T Consensus 29 vvvf~-~~~Cp~C~~~~~~L~~~-------~i~~~~vdid 60 (130)
T 2cq9_A 29 VVIFS-KTSCSYCTMAKKLFHDM-------NVNYKVVELD 60 (130)
T ss_dssp EEEEE-CSSCSHHHHHHHHHHHH-------TCCCEEEETT
T ss_pred EEEEE-cCCChHHHHHHHHHHHc-------CCCcEEEECc
Confidence 34488 99999999888877764 4555555554
No 259
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.03 E-value=0.0012 Score=45.80 Aligned_cols=25 Identities=16% Similarity=0.163 Sum_probs=19.4
Q ss_pred CcEEEEEEcCCCChhhHHHHHHHHHH
Q 028030 95 KPVVVYFYPADETPGCTKQACAFRDS 120 (215)
Q Consensus 95 k~~ll~f~~a~~C~~C~~~~~~l~~l 120 (215)
+..|+.|+ ++||++|+...+.|.++
T Consensus 18 ~~~vv~f~-~~~Cp~C~~~~~~L~~~ 42 (114)
T 2hze_A 18 NNKVTIFV-KYTCPFCRNALDILNKF 42 (114)
T ss_dssp TTCEEEEE-CTTCHHHHHHHHHHTTS
T ss_pred cCCEEEEE-eCCChhHHHHHHHHHHc
Confidence 44677788 99999999887766543
No 260
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.96 E-value=0.002 Score=42.37 Aligned_cols=33 Identities=12% Similarity=0.339 Sum_probs=25.0
Q ss_pred EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 97 VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
.++.|+ ++||++|+...+.|.++ ++.+..+.++
T Consensus 7 ~v~~y~-~~~C~~C~~~~~~L~~~-------~i~~~~vdv~ 39 (89)
T 2klx_A 7 EIILYT-RPNCPYCKRARDLLDKK-------GVKYTDIDAS 39 (89)
T ss_dssp CEEEES-CSCCTTTHHHHHHHHHH-------TCCEEEECSC
T ss_pred eEEEEE-CCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 366677 99999999887776653 5777777777
No 261
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.88 E-value=0.0037 Score=45.56 Aligned_cols=22 Identities=32% Similarity=0.392 Sum_probs=17.7
Q ss_pred EEEEEcCCCChhhHHHHHHHHHH
Q 028030 98 VVYFYPADETPGCTKQACAFRDS 120 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l 120 (215)
|+.|+ ++||++|+...+.|.++
T Consensus 51 Vvvf~-~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 51 VVIFS-KTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHHc
Confidence 44488 99999999888877765
No 262
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.85 E-value=0.00035 Score=47.54 Aligned_cols=25 Identities=24% Similarity=0.228 Sum_probs=19.9
Q ss_pred cEEEEEEcCCCChhhHHHHHHHHHHH
Q 028030 96 PVVVYFYPADETPGCTKQACAFRDSY 121 (215)
Q Consensus 96 ~~ll~f~~a~~C~~C~~~~~~l~~l~ 121 (215)
..++.|+ ++||++|+...+.|.++.
T Consensus 12 ~~v~~f~-~~~C~~C~~~~~~L~~~~ 36 (105)
T 1kte_A 12 GKVVVFI-KPTCPFCRKTQELLSQLP 36 (105)
T ss_dssp TCEEEEE-CSSCHHHHHHHHHHHHSC
T ss_pred CCEEEEE-cCCCHhHHHHHHHHHHcC
Confidence 3467788 999999998888777653
No 263
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.75 E-value=0.0046 Score=41.86 Aligned_cols=41 Identities=12% Similarity=0.229 Sum_probs=29.4
Q ss_pred CcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHH
Q 028030 95 KPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHK 143 (215)
Q Consensus 95 k~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 143 (215)
+..|+.|+ .+||++|++....|.++ |+.+..+.++...+.+
T Consensus 15 ~~~v~vy~-~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~~~~~ 55 (99)
T 3qmx_A 15 SAKIEIYT-WSTCPFCMRALALLKRK-------GVEFQEYCIDGDNEAR 55 (99)
T ss_dssp CCCEEEEE-CTTCHHHHHHHHHHHHH-------TCCCEEEECTTCHHHH
T ss_pred CCCEEEEE-cCCChhHHHHHHHHHHC-------CCCCEEEEcCCCHHHH
Confidence 45677788 99999999888777664 5666667766544333
No 264
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.60 E-value=0.0085 Score=40.76 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=23.5
Q ss_pred cEEEEEEcC-----CCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC
Q 028030 96 PVVVYFYPA-----DETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD 138 (215)
Q Consensus 96 ~~ll~f~~a-----~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 138 (215)
.++| |+ . +||++|+...+.|.++ ++.+..+.++.
T Consensus 18 ~vvv-f~-~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~ 56 (105)
T 2yan_A 18 SVML-FM-KGNKQEAKCGFSKQILEILNST-------GVEYETFDILE 56 (105)
T ss_dssp SEEE-EE-SBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGG
T ss_pred CEEE-EE-ecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCC
Confidence 4444 66 6 9999999887777654 46666666643
No 265
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.58 E-value=0.0065 Score=38.86 Aligned_cols=33 Identities=15% Similarity=0.326 Sum_probs=23.5
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD 138 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 138 (215)
++.|+ +.||++|+...+.|.+. |+.+..+.++.
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~ 35 (82)
T 1fov_A 3 VEIYT-KETCPYCHRAKALLSSK-------GVSFQELPIDG 35 (82)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHH-------TCCCEEEECTT
T ss_pred EEEEE-CCCChhHHHHHHHHHHC-------CCCcEEEECCC
Confidence 56677 99999999887777653 56666666553
No 266
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.45 E-value=0.006 Score=40.83 Aligned_cols=40 Identities=5% Similarity=0.041 Sum_probs=27.4
Q ss_pred EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHH
Q 028030 97 VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKA 144 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 144 (215)
.|+.|. .+|||+|.+.-..| +++|+.+..+.++...+.++
T Consensus 5 ~I~vYs-~~~Cp~C~~aK~~L-------~~~gi~y~~idi~~d~~~~~ 44 (92)
T 2lqo_A 5 ALTIYT-TSWCGYCLRLKTAL-------TANRIAYDEVDIEHNRAAAE 44 (92)
T ss_dssp CEEEEE-CTTCSSHHHHHHHH-------HHTTCCCEEEETTTCHHHHH
T ss_pred cEEEEc-CCCCHhHHHHHHHH-------HhcCCceEEEEcCCCHHHHH
Confidence 366677 99999999775444 34578888888765443333
No 267
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.40 E-value=0.0094 Score=39.20 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=24.6
Q ss_pred EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC
Q 028030 97 VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD 138 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 138 (215)
.++.|+ ..||++|++..+.|.+ .|+.+..+.++.
T Consensus 7 ~v~ly~-~~~C~~C~~~~~~L~~-------~~i~~~~~di~~ 40 (92)
T 2khp_A 7 DVIIYT-RPGCPYCARAKALLAR-------KGAEFNEIDASA 40 (92)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEESTT
T ss_pred cEEEEE-CCCChhHHHHHHHHHH-------cCCCcEEEECCC
Confidence 466788 9999999987666654 356776777654
No 268
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.38 E-value=0.0065 Score=47.56 Aligned_cols=46 Identities=13% Similarity=0.021 Sum_probs=34.2
Q ss_pred cCCcCCCcEEEEEEcCCCChhhHHHHHHH-HHHHHHHHHc-CcEEEEEe
Q 028030 89 LSKFKGKPVVVYFYPADETPGCTKQACAF-RDSYEKFKKA-GAEVIGIS 135 (215)
Q Consensus 89 l~~~~gk~~ll~f~~a~~C~~C~~~~~~l-~~l~~~~~~~-~v~vv~vs 135 (215)
+.+-.++++|+.|+ ...||+|....+.+ .++.++|.+. .++++...
T Consensus 34 ~G~~~A~vtIvef~-Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 34 LGDPKAPILMIEYA-SLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp ESCTTCSEEEEEEE-CTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred cCCCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 33445688999999 99999999988864 6788888532 37776654
No 269
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.36 E-value=0.0062 Score=41.94 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=22.4
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
|+.|+ .+||++|++..+.|.++ |+.+..+.+|
T Consensus 21 v~vy~-~~~Cp~C~~~~~~L~~~-------~i~~~~~di~ 52 (113)
T 3rhb_A 21 VVIYS-KTWCSYCTEVKTLFKRL-------GVQPLVVELD 52 (113)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred EEEEE-CCCChhHHHHHHHHHHc-------CCCCeEEEee
Confidence 66688 99999999887777653 4554445443
No 270
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.17 E-value=0.051 Score=42.11 Aligned_cols=77 Identities=10% Similarity=0.078 Sum_probs=52.4
Q ss_pred CCcEE-EEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCcc
Q 028030 94 GKPVV-VYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD 172 (215)
Q Consensus 94 gk~~l-l~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~ 172 (215)
+.+.+ |.|. ..||..|....+.+++++++++++ +.++.+..++.+ .+.+.+.||+...
T Consensus 130 ~~~~~~l~f~-~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~-------------------~~~~l~~fgl~~~ 188 (227)
T 4f9z_D 130 VIQIHLLLIM-NKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKE-------------------NGKVISFFKLKES 188 (227)
T ss_dssp SCCEEEEEEE-CTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGG-------------------GHHHHHHTTCCGG
T ss_pred CCceEEEEEE-cCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHh-------------------HHHHHHHcCCCcc
Confidence 43444 4555 778999999999999999999876 888888765421 1234556777621
Q ss_pred CCCCCCccEEEEEcCCCcEEEEEe
Q 028030 173 FFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 173 ~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
..| .+.+++..+...+...
T Consensus 189 ---~~P--~~~i~~~~~~~ky~~~ 207 (227)
T 4f9z_D 189 ---QLP--ALAIYQTLDDEWDTLP 207 (227)
T ss_dssp ---GCS--EEEEEESSSCCEEEET
T ss_pred ---cCC--EEEEEECCCCccccCC
Confidence 178 8888886665444443
No 271
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.15 E-value=0.019 Score=38.85 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=20.0
Q ss_pred CcEEEEEEcCCCChhhHHHHHHHHHH
Q 028030 95 KPVVVYFYPADETPGCTKQACAFRDS 120 (215)
Q Consensus 95 k~~ll~f~~a~~C~~C~~~~~~l~~l 120 (215)
+..++.|+ ++||++|++..+.|.++
T Consensus 21 ~~~v~ly~-~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 21 RGKVIMYG-LSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CSCEEEEE-CSSCHHHHHHHHHHHHH
T ss_pred CCeEEEEc-CCCCchHHHHHHHHHHc
Confidence 44567788 99999999988777764
No 272
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.15 E-value=0.036 Score=38.23 Aligned_cols=32 Identities=28% Similarity=0.274 Sum_probs=22.2
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
|+.|+ .+|||+|.+..+.|.++ |+.+-.+.+|
T Consensus 19 v~vy~-~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd 50 (114)
T 3h8q_A 19 VVIFS-KSYCPHSTRVKELFSSL-------GVECNVLELD 50 (114)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEE-cCCCCcHHHHHHHHHHc-------CCCcEEEEec
Confidence 44488 99999999877666653 5555555554
No 273
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.99 E-value=0.018 Score=37.25 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=16.6
Q ss_pred EEEEEEcCCCChhhHHHHHHHHH
Q 028030 97 VVVYFYPADETPGCTKQACAFRD 119 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~ 119 (215)
.++.|+ ..||++|++....|.+
T Consensus 5 ~v~ly~-~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 5 KVKIYT-RNGCPYCVWAKQWFEE 26 (89)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHHH
T ss_pred EEEEEE-cCCChhHHHHHHHHHH
Confidence 466777 9999999987665544
No 274
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.89 E-value=0.021 Score=43.65 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=34.3
Q ss_pred cCCcCCCcEEEEEEcCCCChhhHHHHHHH-HHHHHHHHHc-CcEEEEEeC
Q 028030 89 LSKFKGKPVVVYFYPADETPGCTKQACAF-RDSYEKFKKA-GAEVIGISG 136 (215)
Q Consensus 89 l~~~~gk~~ll~f~~a~~C~~C~~~~~~l-~~l~~~~~~~-~v~vv~vs~ 136 (215)
+.+-.++++|+.|+ ...||+|....+.+ ..+.++|.+. .++++....
T Consensus 24 ~G~~~a~vtvvef~-D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 24 LGKDDAPVTVVEFG-DYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp ESCTTCSEEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred ecCCCCCEEEEEEE-CCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 33345789999999 99999999888876 4566677542 477776653
No 275
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.86 E-value=0.013 Score=40.93 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=22.2
Q ss_pred EEEEEEcCCCChhhHHH-HHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 97 VVVYFYPADETPGCTKQ-ACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~-~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
.|+.|+ .+||++|+.. .+.|.++. ...+.+..+.+|
T Consensus 26 ~Vvvf~-~~~Cp~C~~alk~~L~~~~----~~~i~~~~vdid 62 (118)
T 3c1r_A 26 EIFVAS-KTYCPYCHAALNTLFEKLK----VPRSKVLVLQLN 62 (118)
T ss_dssp SEEEEE-CSSCHHHHHHHHHHHTTSC----CCGGGEEEEEGG
T ss_pred cEEEEE-cCCCcCHHHHHHHHHHHcC----CCCCCeEEEECc
Confidence 356688 9999999987 44443321 011666666654
No 276
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=95.83 E-value=0.021 Score=37.43 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=17.9
Q ss_pred EEEEEEcCCCChhhHHHHHHHHHH
Q 028030 97 VVVYFYPADETPGCTKQACAFRDS 120 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~l 120 (215)
.++.|+ ++||++|++....|.++
T Consensus 13 ~v~ly~-~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 13 EVLMYG-LSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SSEEEE-CTTCHHHHHHHHHHHHH
T ss_pred eEEEEE-CCCChHHHHHHHHHHHc
Confidence 356677 99999999887777664
No 277
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=95.49 E-value=0.029 Score=41.98 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=35.4
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHH-HHHHHHHHHcCcEEEEEeCC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAF-RDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l-~~l~~~~~~~~v~vv~vs~d 137 (215)
.+++++|.|| ...||+|....+.+ .++.+++.. .+++..+..+
T Consensus 16 ~~~~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVF-SYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEECT
T ss_pred CCCcEEEEEE-eCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEecC
Confidence 4678999999 89999999999999 888888875 3777777643
No 278
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.34 E-value=0.061 Score=36.67 Aligned_cols=29 Identities=7% Similarity=-0.060 Sum_probs=21.5
Q ss_pred CCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHH
Q 028030 105 DETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSS 140 (215)
Q Consensus 105 ~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~ 140 (215)
.||++|.+....|.++ |+.+..+.++...
T Consensus 28 ~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~~~ 56 (109)
T 1wik_A 28 AKCGFSKQILEILNST-------GVEYETFDILEDE 56 (109)
T ss_dssp CCSSTHHHHHHHHHHT-------CSCEEEEESSSCH
T ss_pred CCCchHHHHHHHHHHc-------CCCeEEEECCCCH
Confidence 8999999887666543 6888888776433
No 279
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.11 E-value=0.09 Score=40.04 Aligned_cols=37 Identities=5% Similarity=-0.050 Sum_probs=29.0
Q ss_pred EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEe
Q 028030 97 VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGIS 135 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs 135 (215)
.|.+|+ -.-||.|-...+.|.++.+++++ +++|....
T Consensus 4 ~I~~~~-D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVH-DPMCSWCWGYKPTIEKLKQQLPG-VIQFEYVV 40 (208)
T ss_dssp EEEEEE-CTTCHHHHHHHHHHHHHHHHSCT-TSEEEEEE
T ss_pred EEEEEE-CCCCchhhhhhHHHHHHHHhCCC-CceEEEEe
Confidence 444555 88899999999999999998864 57777665
No 280
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=94.77 E-value=0.062 Score=43.19 Aligned_cols=40 Identities=13% Similarity=0.264 Sum_probs=32.5
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
.|+.+|++|+ -..||+|++..+.+.++.++ -.|.++.+..
T Consensus 146 ~gk~~I~vFt-Dp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVS-DPMCPHCQKELTKLRDHLKE---NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEE-CTTCHHHHHHHHTHHHHHHH---CEEEEEECCC
T ss_pred CCCeEEEEEE-CcCChhHHHHHHHHHHHhhC---CcEEEEEeec
Confidence 4789999999 99999999999999976543 3477777665
No 281
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.61 E-value=0.14 Score=33.10 Aligned_cols=32 Identities=9% Similarity=-0.070 Sum_probs=22.4
Q ss_pred EEEEEcCC----CChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 98 VVYFYPAD----ETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 98 ll~f~~a~----~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
++.|+ .+ ||+.|.+....|++ .|+.+-.+.++
T Consensus 2 v~iY~-~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYG-YDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIM 37 (87)
T ss_dssp EEEEE-CCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred EEEEE-eCCCCCcCccHHHHHHHHHH-------cCCCEEEEEee
Confidence 44566 88 99999977555544 46777777665
No 282
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.61 E-value=0.18 Score=34.49 Aligned_cols=49 Identities=12% Similarity=0.035 Sum_probs=27.4
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHH
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKK 148 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~ 148 (215)
|+.|. .++|+.|.. ...-++..+-+.+.|+.+..+.++...+.++.+.+
T Consensus 10 V~vy~-~~~C~~C~~-~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~ 58 (111)
T 2ct6_A 10 IRVFI-ASSSGFVAI-KKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYK 58 (111)
T ss_dssp EEEEE-CSSCSCHHH-HHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHH
T ss_pred EEEEE-cCCCCCccc-chhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHH
Confidence 55666 899999982 11111112223445788888887654444444443
No 283
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.55 E-value=0.034 Score=39.43 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=16.0
Q ss_pred EEEEEcCCCChhhHHH-HHHHHH
Q 028030 98 VVYFYPADETPGCTKQ-ACAFRD 119 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~-~~~l~~ 119 (215)
|+.|+ .+||++|... .+.|.+
T Consensus 39 Vvvy~-~~~Cp~C~~a~k~~L~~ 60 (129)
T 3ctg_A 39 VFVAA-KTYCPYCKATLSTLFQE 60 (129)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHTT
T ss_pred EEEEE-CCCCCchHHHHHHHHHh
Confidence 66788 9999999977 555544
No 284
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=93.97 E-value=0.14 Score=35.74 Aligned_cols=63 Identities=13% Similarity=0.205 Sum_probs=46.2
Q ss_pred EEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC----CCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 100 YFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG----DDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 100 ~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~----d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
.+|...+|+.|++...-|.+ +|+.+-.+.. .+.+++++|++..|.++.-+....+..++.+++
T Consensus 6 ~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l 72 (120)
T 3fz4_A 6 TFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGL 72 (120)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------HTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTH
T ss_pred EEEeCCCChHHHHHHHHHHH-------cCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCCcchhhcCc
Confidence 34448999999988666554 4677666654 356899999999998876666677777777665
No 285
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=93.61 E-value=0.14 Score=35.68 Aligned_cols=64 Identities=8% Similarity=0.007 Sum_probs=47.0
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC----CHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 99 VYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD----DSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 99 l~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
..|. ..+|+.|++...-|. ++|+.+..+... +.+++++|++..+.++.-+....+..++.++..
T Consensus 3 ~iY~-~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~ 70 (120)
T 3l78_A 3 TLFL-SPSCTSCRKARAWLN-------RHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDID 70 (120)
T ss_dssp EEEE-CSSCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTCC
T ss_pred EEEe-CCCCHHHHHHHHHHH-------HcCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCCC
Confidence 3444 899999998865554 357777766652 568999999998888766666777777777754
No 286
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=93.43 E-value=0.15 Score=37.92 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=32.4
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHH-HHHHHHHHHc-CcEEEEEe
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAF-RDSYEKFKKA-GAEVIGIS 135 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l-~~l~~~~~~~-~v~vv~vs 135 (215)
.++++|+.|+ ...||+|....+.+ .++.++|.+. +++++...
T Consensus 10 ~a~~~i~~f~-D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYG-DYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEE-CCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 4678899998 99999999999998 4677778643 47777654
No 287
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=93.33 E-value=0.14 Score=36.37 Aligned_cols=65 Identities=11% Similarity=0.059 Sum_probs=47.3
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC----CHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD----DSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
+..|+ ..+|+.|++....|.+ .|+.+..+.++ +.++++++++..+.++.-+....+..++..+..
T Consensus 3 i~lY~-~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 3 VTLYT-SPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCC
T ss_pred EEEEe-CCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCcc
Confidence 44555 8999999987666654 46777666653 347899999988887766667777777777754
No 288
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=93.12 E-value=0.17 Score=35.20 Aligned_cols=35 Identities=11% Similarity=-0.053 Sum_probs=22.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHcCcE-EEEEeCCCHHHHHHHHH
Q 028030 106 ETPGCTKQACAFRDSYEKFKKAGAE-VIGISGDDSSSHKAFAK 147 (215)
Q Consensus 106 ~C~~C~~~~~~l~~l~~~~~~~~v~-vv~vs~d~~~~~~~~~~ 147 (215)
||++|.+....|.+ .|+. +..+.++...+.++.++
T Consensus 34 ~Cp~C~~ak~lL~~-------~gv~~~~~vdV~~d~~~~~~l~ 69 (118)
T 2wem_A 34 QCGFSNAVVQILRL-------HGVRDYAAYNVLDDPELRQGIK 69 (118)
T ss_dssp SSHHHHHHHHHHHH-------TTCCCCEEEESSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHH-------cCCCCCEEEEcCCCHHHHHHHH
Confidence 99999987666554 3663 66666654444444443
No 289
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=93.09 E-value=0.087 Score=41.05 Aligned_cols=53 Identities=19% Similarity=0.301 Sum_probs=38.5
Q ss_pred CCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHH
Q 028030 151 LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKF 211 (215)
Q Consensus 151 ~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~ 211 (215)
+.+..+.+.+.++.+.||+.. +| +.++++++|++....... .....+...|+.
T Consensus 185 i~v~~~~~~~~~l~~~f~v~~-----~P--slvl~~~~g~~~~~~~~~-~~r~~~~~~l~~ 237 (244)
T 3q6o_A 185 VAVRRVLNTEANVVRKFGVTD-----FP--SCYLLFRNGSVSRVPVLM-ESRSFYTAYLQR 237 (244)
T ss_dssp EEEEEEETTCHHHHHHHTCCC-----SS--EEEEEETTSCEEECCCSS-SSHHHHHHHHHT
T ss_pred eEEEEEeCchHHHHHHcCCCC-----CC--eEEEEeCCCCeEeecccc-ccHHHHHHHHHh
Confidence 346666777899999999997 89 999999999998765442 223444555443
No 290
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=93.07 E-value=0.12 Score=35.46 Aligned_cols=35 Identities=0% Similarity=-0.190 Sum_probs=22.1
Q ss_pred CCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHH
Q 028030 105 DETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFA 146 (215)
Q Consensus 105 ~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~ 146 (215)
+||++|.+....|.+ .|+.+..+.++...+.++.+
T Consensus 29 ~~Cp~C~~ak~~L~~-------~gi~y~~~di~~d~~~~~~l 63 (111)
T 3zyw_A 29 PRCGFSKQMVEILHK-------HNIQFSSFDIFSDEEVRQGL 63 (111)
T ss_dssp BSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHH
T ss_pred CcchhHHHHHHHHHH-------cCCCeEEEECcCCHHHHHHH
Confidence 899999987666654 36666666665333333333
No 291
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=92.99 E-value=0.43 Score=31.23 Aligned_cols=45 Identities=2% Similarity=-0.059 Sum_probs=23.4
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHH
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKA 144 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 144 (215)
|+.|. .++|+.|... ..-.+..+-+.+.|+.+..+.++...+.++
T Consensus 4 v~ly~-~~~C~~c~~~-~~~~~ak~~L~~~~i~~~~~di~~~~~~~~ 48 (93)
T 1t1v_A 4 LRVYS-TSVTGSREIK-SQQSEVTRILDGKRIQYQLVDISQDNALRD 48 (93)
T ss_dssp EEEEE-CSSCSCHHHH-HHHHHHHHHHHHTTCCCEEEETTSCHHHHH
T ss_pred EEEEE-cCCCCCchhh-HHHHHHHHHHHHCCCceEEEECCCCHHHHH
Confidence 45566 8999999410 000111122334577777777754433333
No 292
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=92.59 E-value=0.14 Score=35.82 Aligned_cols=62 Identities=18% Similarity=0.113 Sum_probs=45.0
Q ss_pred EEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC----CCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCC
Q 028030 101 FYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG----DDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV 169 (215)
Q Consensus 101 f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~----d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~ 169 (215)
+|...+|+.|++...-|. ++|+.+-.+.. .+.+++++|++..++++.-+....+..++.+++
T Consensus 8 iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l 73 (120)
T 3gkx_A 8 FLQYPACSTCQKAKKWLI-------ENNIEYTNRLIVDDNPTVEELKAWIPLSGLPVKKFFNTSGVVYKELKL 73 (120)
T ss_dssp EEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTTCCCHHHHHHHHHHHTSCGGGGBCTTSHHHHHTTH
T ss_pred EEECCCChHHHHHHHHHH-------HcCCceEEEecccCcCCHHHHHHHHHHcCCCHHHeEeCCCchhhhcCc
Confidence 343899999998865554 34666666654 356899999999998876666667777777664
No 293
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=92.57 E-value=0.18 Score=35.30 Aligned_cols=64 Identities=8% Similarity=0.044 Sum_probs=46.4
Q ss_pred EEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC----CCHHHHHHHHHHcCC-CeEEEEcCChhHHHHhCCC
Q 028030 100 YFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG----DDSSSHKAFAKKYRL-PYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 100 ~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~----d~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~g~~ 170 (215)
.+|...+|+.|++...-|. ++|+.+..+.. .+.+++++|++..|+ +..-+....+..++.+++.
T Consensus 8 ~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~ 76 (121)
T 3rdw_A 8 TIYHNPRCSKSRETLALVE-------QQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLD 76 (121)
T ss_dssp EEECCTTCHHHHHHHHHHH-------TTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTT
T ss_pred EEEECCCCHHHHHHHHHHH-------HcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCcc
Confidence 3444889999998865554 45777666654 256899999999998 7655566677778877764
No 294
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.47 E-value=0.41 Score=33.27 Aligned_cols=35 Identities=6% Similarity=-0.029 Sum_probs=22.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHcCcE---EEEEeCCCHHHHHHHHH
Q 028030 106 ETPGCTKQACAFRDSYEKFKKAGAE---VIGISGDDSSSHKAFAK 147 (215)
Q Consensus 106 ~C~~C~~~~~~l~~l~~~~~~~~v~---vv~vs~d~~~~~~~~~~ 147 (215)
||++|.+....|.++ |+. +..+.++...++++.+.
T Consensus 30 ~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~~~~~~~~l~ 67 (121)
T 3gx8_A 30 KCGFSRATIGLLGNQ-------GVDPAKFAAYNVLEDPELREGIK 67 (121)
T ss_dssp CTTHHHHHHHHHHHH-------TBCGGGEEEEECTTCHHHHHHHH
T ss_pred CCccHHHHHHHHHHc-------CCCcceEEEEEecCCHHHHHHHH
Confidence 999999887766664 565 66666654444444443
No 295
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=92.44 E-value=0.71 Score=41.65 Aligned_cols=124 Identities=15% Similarity=0.212 Sum_probs=71.9
Q ss_pred ccCCCCCCCCCeEEeC-CCCCeeecCCc-C--CCcEEEEEEcCCC-ChhhHHHHHHHHHHH-------HHHHH------c
Q 028030 66 AKVSKGQAPPSFTLKD-QEGRNVSLSKF-K--GKPVVVYFYPADE-TPGCTKQACAFRDSY-------EKFKK------A 127 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~-~~g~~~~l~~~-~--gk~~ll~f~~a~~-C~~C~~~~~~l~~l~-------~~~~~------~ 127 (215)
..+.+|..+|++.+.. .+|+++.+.++ . |+++||.|- ..- .+.+...+..+.+.. .+|.. .
T Consensus 477 ~~~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 555 (665)
T 1pn0_A 477 KNCVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFA-GKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNS 555 (665)
T ss_dssp TTSCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEE-ECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTS
T ss_pred CCCCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEec-CCcccchhHHHHHHHHHHhhccccHHhhcCCcccCccc
Confidence 4567999999999876 58988888884 3 799999987 432 222333333333321 22311 1
Q ss_pred CcEEEEEeCCCHH--HHHHHHH-Hc--CCC-eEEEEcC------ChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEE
Q 028030 128 GAEVIGISGDDSS--SHKAFAK-KY--RLP-YTLLSDE------GNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIY 195 (215)
Q Consensus 128 ~v~vv~vs~d~~~--~~~~~~~-~~--~~~-~~~~~d~------~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~ 195 (215)
-++++.|...... ++..+-. .+ +.. +.++.|. .+.+++.||+..+ -. .++||-|||-|-+..
T Consensus 556 ~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~----~g--~~vlvRPD~yV~~~~ 629 (665)
T 1pn0_A 556 RIDVITIHSCHRDDIEMHDFPAPALHPKWQYDFIYADCDSWHHPHPKSYQAWGVDET----KG--AVVVVRPDGYTSLVT 629 (665)
T ss_dssp SEEEEEEESSCTTSCCGGGSCTTTTSCTTCCSSEEECSCCSSSCCCCHHHHHTBCTT----TC--EEEEECTTSBEEEEE
T ss_pred eeEEEEEecCCCCccchhhCCHHHcCcccchheEeecCcccccccccHHHHcCCCCC----Cc--eEEEECCCCcEEEEe
Confidence 2777777432111 0111100 00 112 2345563 4678999998631 13 789999999998776
Q ss_pred e
Q 028030 196 N 196 (215)
Q Consensus 196 ~ 196 (215)
.
T Consensus 630 ~ 630 (665)
T 1pn0_A 630 D 630 (665)
T ss_dssp C
T ss_pred c
Confidence 5
No 296
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=92.38 E-value=0.19 Score=35.92 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=22.4
Q ss_pred cEEEEEEcC----CCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 96 PVVVYFYPA----DETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 96 ~~ll~f~~a----~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
.++|+.+ + .||++|.+....|.+ .|+.+..+.++
T Consensus 36 ~Vvvy~k-s~~~~~~Cp~C~~ak~~L~~-------~gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMK-GSPKLPSCGFSAQAVQALAA-------CGERFAYVDIL 73 (135)
T ss_dssp SEEEEES-BCSSSBSSHHHHHHHHHHHT-------TCSCCEEEEGG
T ss_pred CEEEEEE-ecCCCCCCccHHHHHHHHHH-------cCCceEEEECC
Confidence 4555444 4 799999987666644 36776667664
No 297
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=92.33 E-value=0.18 Score=37.76 Aligned_cols=42 Identities=14% Similarity=0.066 Sum_probs=32.7
Q ss_pred CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEe
Q 028030 93 KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGIS 135 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs 135 (215)
.++++|+.|. -..||+|.+..+.+.++.+++....++++.-.
T Consensus 13 ~a~vtiv~f~-D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFL-EPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEE-CTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 3678899998 88999999999999887777622247777654
No 298
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=92.03 E-value=0.55 Score=42.09 Aligned_cols=125 Identities=10% Similarity=0.048 Sum_probs=72.8
Q ss_pred ccCCCCCCCCCeEEeC-CCCCeeecCCc---CCCcEEEEEEcCCCChhhH-HHHHHHHHHH--------HHHHHc-----
Q 028030 66 AKVSKGQAPPSFTLKD-QEGRNVSLSKF---KGKPVVVYFYPADETPGCT-KQACAFRDSY--------EKFKKA----- 127 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~-~~g~~~~l~~~---~gk~~ll~f~~a~~C~~C~-~~~~~l~~l~--------~~~~~~----- 127 (215)
..+.+|..+|+..+.. .+|+.+.+.++ .|+++||.|- ....+.+. ..+..+.+.. .+|...
T Consensus 465 ~~~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 543 (639)
T 2dkh_A 465 SGFTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFA-AQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDID 543 (639)
T ss_dssp TTSCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEEC-CTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCTT
T ss_pred CCCCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEec-CCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCcC
Confidence 3467899999999875 58999888884 3799999986 44333232 2333333221 234211
Q ss_pred -CcEEEEEeCCCH---------HHHHHHHHHcCC-C-eEEEEcCC----hhHHHHhCCCccCCCCCCccEEEEEcCCCcE
Q 028030 128 -GAEVIGISGDDS---------SSHKAFAKKYRL-P-YTLLSDEG----NKVRKEWGVPADFFGSLPGRQTYILDKNGVV 191 (215)
Q Consensus 128 -~v~vv~vs~d~~---------~~~~~~~~~~~~-~-~~~~~d~~----~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v 191 (215)
-++++.|..... +..+.+..++++ + ..++.|.. +.+++.||+..+ -. .++||-|||-|
T Consensus 544 ~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~----~g--~~v~vRPD~yv 617 (639)
T 2dkh_A 544 SIFDLRAVFPQAYTEVALETLPALLLPPKGQLGMIDYEKVFSPDLKNAGQDIFELRGIDRQ----QG--ALVVVRPDQYV 617 (639)
T ss_dssp SSEEEEEECSSCGGGCCGGGSCGGGSCEETTTTEECCCSEEECCCSSTTCCHHHHTTBCTT----TC--EEEEECTTSBE
T ss_pred ceEEEEEEecCCCCccchhhCcHhhCCcccccccccceeEEeCCCcccccchHHHhCCCCC----ce--EEEEECCCCce
Confidence 267777743321 111111112222 2 23456632 568999998631 23 78999999999
Q ss_pred EEEEeC
Q 028030 192 QLIYNN 197 (215)
Q Consensus 192 ~~~~~g 197 (215)
-+....
T Consensus 618 ~~~~~~ 623 (639)
T 2dkh_A 618 AQVLPL 623 (639)
T ss_dssp EEEECT
T ss_pred EEeech
Confidence 776543
No 299
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=91.98 E-value=0.18 Score=35.15 Aligned_cols=66 Identities=12% Similarity=0.100 Sum_probs=48.0
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC----CCHHHHHHHHHHcCCC-eEEEEcCChhHHHHhCCCc
Q 028030 99 VYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG----DDSSSHKAFAKKYRLP-YTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 99 l~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~----d~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~g~~~ 171 (215)
|.+|....|+.|++...-|.+ +|+.+-.+.. -+.+++++|++..|++ ..-+....+..++.+++..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-------QGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGD 76 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTC
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEEeccCcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCccc
Confidence 344548899999988666553 4666665543 4678999999999988 6556667778888877653
No 300
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=91.87 E-value=0.21 Score=34.00 Aligned_cols=26 Identities=0% Similarity=-0.148 Sum_probs=18.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCC
Q 028030 106 ETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD 138 (215)
Q Consensus 106 ~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 138 (215)
||++|.+....|.+ .|+.+..+.++.
T Consensus 32 ~Cp~C~~ak~~L~~-------~gi~~~~~dI~~ 57 (109)
T 3ipz_A 32 MCGFSNTVVQILKN-------LNVPFEDVNILE 57 (109)
T ss_dssp SSHHHHHHHHHHHH-------TTCCCEEEEGGG
T ss_pred CChhHHHHHHHHHH-------cCCCcEEEECCC
Confidence 99999987666555 366666666643
No 301
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.80 E-value=0.48 Score=32.81 Aligned_cols=61 Identities=13% Similarity=0.064 Sum_probs=41.3
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC----CCHHHHHHHHHHcCCCeEEEEcCChhHHHHhC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG----DDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWG 168 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~----d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 168 (215)
+..|. ..+|+.|++....|.+ +|+.+..+.+ .+.+++++++++.|+ .-+....+..++.++
T Consensus 7 i~iY~-~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~ 71 (120)
T 2kok_A 7 VTIYG-IKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTVPW--EQLLNRAGTTFRKLP 71 (120)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHSCG--GGTBCSSSHHHHHSC
T ss_pred EEEEE-CCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHcCh--HhhccCCchhhHhcC
Confidence 44455 8999999988766665 3666666654 345889999998884 233445566666665
No 302
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=91.77 E-value=1.3 Score=30.84 Aligned_cols=82 Identities=12% Similarity=0.116 Sum_probs=47.4
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
.+++||-|| .+||..| .+.+.+.++.+ + .+.+..+ .+.++++.|++.
T Consensus 39 ~~v~VVGfF-~~~~~~~---~~~F~~~A~~~-~-d~~F~~t------------------------~~~~v~~~~~v~--- 85 (124)
T 2l4c_A 39 TEVAVIGFF-QDLEIPA---VPILHSMVQKF-P-GVSFGIS------------------------TDSEVLTHYNIT--- 85 (124)
T ss_dssp SSEEEEEEC-SCTTSTH---HHHHHHHHHHC-T-TSEEEEE------------------------CCHHHHHHTTCC---
T ss_pred CCCEEEEEE-CCCCChh---HHHHHHHHHhC-C-CceEEEE------------------------ChHHHHHHcCCC---
Confidence 578899999 9999998 45566666666 3 3544333 235677888887
Q ss_pred CCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 174 FGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
.| .++|+.+-..-...+.|.....-..++|.+.|+
T Consensus 86 ---~~--~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~ 120 (124)
T 2l4c_A 86 ---GN--TICLFRLVDNEQLNLEDEDIESIDATKLSRFIE 120 (124)
T ss_dssp ---SS--CEEEEETTTTEEEEECHHHHTTCCHHHHHHHHH
T ss_pred ---CC--eEEEEEcCCCCceeecCcccCCCCHHHHHHHHH
Confidence 46 677776532222234441000113455655554
No 303
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=91.66 E-value=0.18 Score=36.25 Aligned_cols=64 Identities=11% Similarity=0.082 Sum_probs=46.8
Q ss_pred EEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC----CHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 101 FYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD----DSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 101 f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
+|...+|+.|++...-|.+ +|+.+..+... +.++++++++..+++..-+....+..++.+++..
T Consensus 6 iY~~p~C~~crkak~~L~~-------~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 6 IYHNPASGTSRNTLEMIRN-------SGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp EECCTTCHHHHHHHHHHHH-------TTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTTS
T ss_pred EEECCCChHHHHHHHHHHH-------cCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCcc
Confidence 4448999999987655544 57777777653 4688999999999886655667777788777653
No 304
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=91.31 E-value=0.5 Score=33.23 Aligned_cols=48 Identities=10% Similarity=0.211 Sum_probs=28.8
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC-CHHHHHHHHHH
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD-DSSSHKAFAKK 148 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d-~~~~~~~~~~~ 148 (215)
|+.|. .+|||+|.+....|.+... + .-.++++-|..+ +.+++++++++
T Consensus 16 Vvvys-k~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~d~~~~~~~l~~ 64 (127)
T 3l4n_A 16 IIIFS-KSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHGHGEELQEYIKL 64 (127)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGSTTHHHHHHHHHH
T ss_pred EEEEE-cCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCCCHHHHHHHHHH
Confidence 66677 8999999988776665310 0 112455555543 44566666654
No 305
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=91.26 E-value=0.63 Score=35.46 Aligned_cols=47 Identities=13% Similarity=0.110 Sum_probs=34.1
Q ss_pred ecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHH-HHHHc-CcEEEEEe
Q 028030 88 SLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYE-KFKKA-GAEVIGIS 135 (215)
Q Consensus 88 ~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~-~~~~~-~v~vv~vs 135 (215)
.+.+-.++++|+.|. -..||+|.+..+.+....+ +|-+. .++++...
T Consensus 9 ~~G~~~a~vtivef~-D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 9 LLGNPAAKLRLVEFV-SYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp EESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred eecCCCCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 444445789999999 8889999999888766544 77322 47777654
No 306
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=90.65 E-value=1.7 Score=30.24 Aligned_cols=50 Identities=6% Similarity=-0.021 Sum_probs=28.5
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCH-HHHHHHHHHc
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDS-SSHKAFAKKY 149 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~-~~~~~~~~~~ 149 (215)
|..|. ++.|+.|... ..=.+...-+..+||.+.-+.++.. +.-+++.+..
T Consensus 2 V~vYt-t~~c~~c~~k-k~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 2 IRVYI-ASSSGSTAIK-KKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp EEEEE-CTTCSCHHHH-HHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred EEEEe-cCCCCCccch-HHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 45555 8999999511 1111222335667899888888644 4434444443
No 307
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=90.24 E-value=2.3 Score=36.92 Aligned_cols=113 Identities=12% Similarity=0.166 Sum_probs=67.8
Q ss_pred ccCCCCCCCCCeEEeCCCCCeeecCCcCCC-cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHH
Q 028030 66 AKVSKGQAPPSFTLKDQEGRNVSLSKFKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKA 144 (215)
Q Consensus 66 ~~~~~g~~~P~f~l~~~~g~~~~l~~~~gk-~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 144 (215)
....+|..+|+.-+.. +|+.+++-|+-|+ .+||.+- .. . .-.....+..+++. -.++++.|..+
T Consensus 418 ~~~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~~~--~~-~---~~~~~~~~~~~~~~-~~~~~~~~~~~------- 482 (535)
T 3ihg_A 418 PSGRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLAGE--LG-A---DWVAAAEAVSAELG-VPVRAYRVGAG------- 482 (535)
T ss_dssp CCCCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEECT--TC-H---HHHHHHHHHHHHHT-CCEEEEEBTTT-------
T ss_pred CCCCCCCcCCCceeec-CCceeeHHHhcCCceEEEecC--Cc-c---HHHHHHHHHHHhcC-CceEEEEeCCc-------
Confidence 4568999999998853 5777888887554 6776542 11 1 11111122222221 12444444211
Q ss_pred HHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCC-CCCccHHHHHHHH
Q 028030 145 FAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQF-QPEKHIDETLKFL 212 (215)
Q Consensus 145 ~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~-~~~~~~~~il~~l 212 (215)
+.|..+.+.+.||+.. . ..+||-|||-|-++..... ++...+.++++.|
T Consensus 483 -----------~~d~~~~~~~~~~~~~------~--~~~lvRPD~~va~r~~~~~~~~~~~l~~~~~~~ 532 (535)
T 3ihg_A 483 -----------LTDPESAVSERYGIGK------A--GASLVRPDGIVAWRTDEAAADAAQTLEGVLRRV 532 (535)
T ss_dssp -----------BBCSSCCHHHHHTCTT------T--CEEEECTTSBEEEEESSCCSSHHHHHHHHHHHH
T ss_pred -----------cccCcchHHHHhCCCC------C--ceEeeCCCceeEEecCCCCCCHHHHHHHHHHHH
Confidence 4678889999999874 2 5899999999999987632 2234445555443
No 308
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=88.81 E-value=2.7 Score=34.30 Aligned_cols=40 Identities=10% Similarity=0.062 Sum_probs=30.7
Q ss_pred cEEEEEEcCCCChhhHHHHHHHHHHHHHHHH-cCcEEEEEeC
Q 028030 96 PVVVYFYPADETPGCTKQACAFRDSYEKFKK-AGAEVIGISG 136 (215)
Q Consensus 96 ~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~ 136 (215)
..+|.|. ..+|+.|....+.++++++++++ ..+.++.+..
T Consensus 247 ~~~l~f~-~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~ 287 (350)
T 1sji_A 247 IHIVAFA-ERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDP 287 (350)
T ss_dssp EEEEEEC-CTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECG
T ss_pred cEEEEEE-cCCCccHHHHHHHHHHHHHHhCCCCceEEEEECc
Confidence 3455566 78899999999999999999985 3477777754
No 309
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=88.56 E-value=0.52 Score=32.34 Aligned_cols=60 Identities=5% Similarity=-0.028 Sum_probs=39.7
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC----CHHHHHHHHHHcCCCeEEEEcCChhHHHHhC
Q 028030 99 VYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD----DSSSHKAFAKKYRLPYTLLSDEGNKVRKEWG 168 (215)
Q Consensus 99 l~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 168 (215)
..|. ..+|+.|++....|.+ +|+.+..+.++ +.+++++|++..|+ .-+....+..++.++
T Consensus 3 ~iY~-~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~~l~~~~~~~g~--~~l~n~~~~~~k~l~ 66 (114)
T 1rw1_A 3 VLYG-IKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDREHLRRWCAEHGW--QTVLNRAGTTFRKLD 66 (114)
T ss_dssp EEEE-CSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHHHHHHHHHHHCH--HHHBCTTSHHHHTSC
T ss_pred EEEE-CCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHHHHHHHHHhCCh--HHhccCCcHhHHhcC
Confidence 3445 8999999987665554 47777666653 45889999998873 333344555555554
No 310
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=87.58 E-value=0.82 Score=35.32 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=22.1
Q ss_pred cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 96 PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 96 ~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
..++.|. ..||+.|++....|.+. |+.+..+.++
T Consensus 170 ~~i~ly~-~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~ 203 (241)
T 1nm3_A 170 ESISIFT-KPGCPFCAKAKQLLHDK-------GLSFEEIILG 203 (241)
T ss_dssp CCEEEEE-CSSCHHHHHHHHHHHHH-------TCCCEEEETT
T ss_pred ceEEEEE-CCCChHHHHHHHHHHHc-------CCceEEEECC
Confidence 4566677 89999999776655542 4555555543
No 311
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=85.99 E-value=2.7 Score=33.52 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=26.5
Q ss_pred cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 96 PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 96 ~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
+.|..|+ ..+|++|...-..|.++..+ .++..+.+..
T Consensus 44 ~~VelyT-s~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v 80 (270)
T 2axo_A 44 GVVELFT-SQGCASCPPADEALRKMIQK---GDVVGLSYHV 80 (270)
T ss_dssp CEEEEEE-CTTCTTCHHHHHHHHHHHHH---TSSEEEEEEC
T ss_pred cEEEEEe-CCCCCChHHHHHHHHHhhcc---CCeeeEEEEE
Confidence 5666677 99999999888888887654 3454445543
No 312
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=85.57 E-value=3.5 Score=34.05 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=48.4
Q ss_pred CcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHc-CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 95 KPVVVYFYPADETPGCTKQACAFRDSYEKFKKA-GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 95 k~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
+..+|.|+ ..+|+.|...+..|++++++++++ .+.++.+..+.-.... ..+.+.||+..
T Consensus 248 ~~~~~~f~-~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l-----------------~~~~~~fgl~~-- 307 (367)
T 3us3_A 248 GIHIVAFA-EEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLV-----------------PYWEKTFDIDL-- 307 (367)
T ss_dssp TEEEEEEC-CTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTH-----------------HHHHHHHTCCT--
T ss_pred CcEEEEEE-cCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHH-----------------HHHHHhcCCCC--
Confidence 35666677 778888999999999999999975 3888887653211000 01134577762
Q ss_pred CCCCCccEEEEEcCCCc
Q 028030 174 FGSLPGRQTYILDKNGV 190 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~ 190 (215)
..| .+++++....
T Consensus 308 --~~P--~~~i~~~~~~ 320 (367)
T 3us3_A 308 --SAP--QIGVVNVTDA 320 (367)
T ss_dssp --TSC--EEEEEETTTC
T ss_pred --CCC--eEEEEecccc
Confidence 278 8999986654
No 313
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=84.97 E-value=4.5 Score=30.27 Aligned_cols=39 Identities=21% Similarity=0.100 Sum_probs=27.8
Q ss_pred cEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 96 PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 96 ~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
+.|.+|+ -.-||.|-...+.+.++.+ +.+.+++|.....
T Consensus 8 ~~I~~f~-D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~~ 46 (216)
T 2in3_A 8 PVLWYIA-DPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMPG 46 (216)
T ss_dssp CEEEEEE-CTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEEC
T ss_pred eeEEEEE-CCCCchhhcchHHHHHHHh-cCCCCeEEEEeec
Confidence 4555565 8889999988788888876 4444577776653
No 314
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=82.95 E-value=2.4 Score=29.39 Aligned_cols=55 Identities=25% Similarity=0.378 Sum_probs=39.2
Q ss_pred cCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCe
Q 028030 92 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPY 153 (215)
Q Consensus 92 ~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~ 153 (215)
|+|.++||++- .-- . -..+..|.+.+...|+.+|||....++.+++++...|+++
T Consensus 45 F~~aPVVlDl~-~l~-~-----~~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 45 LKHAPVVINVS-GLE-S-----PVNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLPL 99 (120)
T ss_dssp HTTCEEEEEEE-ECC-S-----SCCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred hCCCcEEEEcc-ccC-C-----hHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCCc
Confidence 47888998886 221 1 1246667777777889999998877676778888877764
No 315
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=77.37 E-value=4.1 Score=35.57 Aligned_cols=40 Identities=20% Similarity=0.391 Sum_probs=33.3
Q ss_pred cCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEE
Q 028030 149 YRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIY 195 (215)
Q Consensus 149 ~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~ 195 (215)
.++.+..+.|.+.++.+.||+.. +| +.++++++|++...-
T Consensus 183 ~~v~v~~v~~~~~~l~~kfgV~~-----~P--slvl~~~nGk~~~~~ 222 (519)
T 3t58_A 183 HAVAVRRVLNTESDLVNKFGVTD-----FP--SCYLLLRNGSVSRVP 222 (519)
T ss_dssp TTEEEEEEETTCHHHHHHHTCCC-----SS--EEEEEETTSCEEECC
T ss_pred CCeeEEEecCchHHHHHHcCCCC-----CC--eEEEEeCCCceeecc
Confidence 34557777888899999999997 88 999999999986553
No 316
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=76.90 E-value=3.8 Score=28.30 Aligned_cols=37 Identities=11% Similarity=-0.032 Sum_probs=23.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHcCc-EEEEEeCCCHHHHHHHHHH
Q 028030 105 DETPGCTKQACAFRDSYEKFKKAGA-EVIGISGDDSSSHKAFAKK 148 (215)
Q Consensus 105 ~~C~~C~~~~~~l~~l~~~~~~~~v-~vv~vs~d~~~~~~~~~~~ 148 (215)
+.|++|.+....|.+ .|+ .+..+.+++..++++++.+
T Consensus 33 P~C~fc~~ak~lL~~-------~gv~~~~~~~v~~~~~~r~~l~~ 70 (118)
T 2wul_A 33 PQCGFSNAVVQILRL-------HGVRDYAAYNVLDDPELRQGIKD 70 (118)
T ss_dssp BSSHHHHHHHHHHHH-------TTCCSCEEEETTSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH-------hCCcCeEeecccCCHHHHHHHHH
Confidence 369999877555543 356 3666776655566666654
No 317
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=76.53 E-value=17 Score=28.64 Aligned_cols=103 Identities=12% Similarity=0.167 Sum_probs=54.2
Q ss_pred CCCCCeEEeCCCCCeeecCCcC-------CCcEEEEEEcCCCChhhHHHHHHHHH---HHH---HHHHcCcEEEEEeCCC
Q 028030 72 QAPPSFTLKDQEGRNVSLSKFK-------GKPVVVYFYPADETPGCTKQACAFRD---SYE---KFKKAGAEVIGISGDD 138 (215)
Q Consensus 72 ~~~P~f~l~~~~g~~~~l~~~~-------gk~~ll~f~~a~~C~~C~~~~~~l~~---l~~---~~~~~~v~vv~vs~d~ 138 (215)
+.+|-|.++|.+|.++-...-. ++.+..+|+ .- ......+..|++ .-. ++. .+++|+.|+.+.
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-s~--~dA~~~L~~lk~~~~~np~~~~~~-~~~kV~~vsL~~ 87 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-SR--QEAQAFINELRNAKNKDPKMQEIV-KSLQVTAVPLGV 87 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-CH--HHHHHHHHHHHHCSSCCHHHHHHH-TTCEEEEEEHHH
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-cH--HHHHHHHHHHHhccccCchhhhhc-cCceEEEeeHHH
Confidence 5789999999999987665332 344555555 11 122333333333 111 333 369999999876
Q ss_pred HHHHHHHH--HHcCCCeEEEEcCC-----hhHHHHhCCCccCCCCCC
Q 028030 139 SSSHKAFA--KKYRLPYTLLSDEG-----NKVRKEWGVPADFFGSLP 178 (215)
Q Consensus 139 ~~~~~~~~--~~~~~~~~~~~d~~-----~~~~~~~g~~~~~~g~~p 178 (215)
...+.+-- +..++.|.++.|.. .++.+.-|.....+..+|
T Consensus 88 vyql~~~~~~k~~~l~F~fvP~~~qV~~A~~Ll~~~Gq~~~~f~gVP 134 (252)
T 4ev1_A 88 IYQQLQQTKKDPNRLLFAFKPVDQEIKGAMDLLRQSGQQVNQFKSVP 134 (252)
T ss_dssp HHHHHHHTTTCTTCEEEEEECCHHHHHHHHHHHHTTTCCCSCCCSCE
T ss_pred HHHHHHhhccCCcCceEEEcCCHHHHHHHHHHHHHcCCCcccCCCcc
Confidence 65443221 12334466766542 122333343333344588
No 318
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=71.76 E-value=2.1 Score=27.16 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=28.7
Q ss_pred CcCCCcEEEEEEcCCCChhh------HHHHHHHHHHHHHHHHc
Q 028030 91 KFKGKPVVVYFYPADETPGC------TKQACAFRDSYEKFKKA 127 (215)
Q Consensus 91 ~~~gk~~ll~f~~a~~C~~C------~~~~~~l~~l~~~~~~~ 127 (215)
+++|+.++|...++.+|+.| ..++..+.++...++++
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~~ 65 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRAS 65 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHHH
Confidence 45888888888889999999 56777777777777653
No 319
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=71.70 E-value=13 Score=24.23 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCCCeEEEE-cCChhHHHHh-----CCCccCCCCCCccEEEEEcCCCcEE
Q 028030 140 SSHKAFAKKYRLPYTLLS-DEGNKVRKEW-----GVPADFFGSLPGRQTYILDKNGVVQ 192 (215)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~-d~~~~~~~~~-----g~~~~~~g~~p~~~~~lid~~G~v~ 192 (215)
...++++++.+++|..+. |.+.+....+ |.. .+| .++| .||.+.
T Consensus 18 ~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~-----tVP---~I~i-~Dg~~l 67 (92)
T 2lqo_A 18 LRLKTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNR-----TVP---TVKF-ADGSTL 67 (92)
T ss_dssp HHHHHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSS-----CSC---EEEE-TTSCEE
T ss_pred HHHHHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCC-----EeC---EEEE-eCCEEE
Confidence 678999999999998663 4444433322 343 389 4445 478774
No 320
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=70.18 E-value=5.3 Score=30.37 Aligned_cols=57 Identities=12% Similarity=0.135 Sum_probs=36.0
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
.+++||-|+ +.|| ....+.+.+.++.++ .+.+... .+.++.+.|++.
T Consensus 27 ~~v~vVgff-~~~~---~~~~~~f~~~A~~l~--~~~F~~t------------------------~~~~v~~~~~v~--- 73 (227)
T 4f9z_D 27 TEVAVIGFF-QDLE---IPAVPILHSMVQKFP--GVSFGIS------------------------TDSEVLTHYNIT--- 73 (227)
T ss_dssp SSEEEEEEC-SCSC---STHHHHHHHHTTTCT--TSEEEEE------------------------CCHHHHHHTTCC---
T ss_pred CCeEEEEEe-cCCC---chhHHHHHHHHHhCC--CceEEEE------------------------CCHHHHHHcCCC---
Confidence 467888888 8775 456667777766663 3444332 245667778776
Q ss_pred CCCCCccEEEEEcCC
Q 028030 174 FGSLPGRQTYILDKN 188 (215)
Q Consensus 174 ~g~~p~~~~~lid~~ 188 (215)
.| +++++.+.
T Consensus 74 ---~p--~i~lfk~~ 83 (227)
T 4f9z_D 74 ---GN--TICLFRLV 83 (227)
T ss_dssp ---SS--EEEEEETT
T ss_pred ---CC--eEEEEEec
Confidence 36 77777653
No 321
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=70.17 E-value=34 Score=26.15 Aligned_cols=81 Identities=17% Similarity=0.249 Sum_probs=45.4
Q ss_pred CCcEEEEEEcCCCCh--hhH-HHHHHHHHHHHHHHHc--CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhC
Q 028030 94 GKPVVVYFYPADETP--GCT-KQACAFRDSYEKFKKA--GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWG 168 (215)
Q Consensus 94 gk~~ll~f~~a~~C~--~C~-~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 168 (215)
+++.+|.|+...+.. -|. .....+.+++++|+++ .+.++.+..++ ...+...||
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~---------------------~~~~~~~fg 187 (252)
T 2h8l_A 129 GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKT---------------------FSHELSDFG 187 (252)
T ss_dssp SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTT---------------------THHHHGGGT
T ss_pred CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHH---------------------HHHHHHHcC
Confidence 456666666233321 122 4566778888888864 37777776432 223556677
Q ss_pred CCccCCCCCCccEEEEEcCCCcEEEEEeCCC
Q 028030 169 VPADFFGSLPGRQTYILDKNGVVQLIYNNQF 199 (215)
Q Consensus 169 ~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~ 199 (215)
+..+ ....| .+.++|.+|+ .+...+..
T Consensus 188 l~~~-~~~~P--~v~i~~~~~~-ky~~~~~~ 214 (252)
T 2h8l_A 188 LEST-AGEIP--VVAIRTAKGE-KFVMQEEF 214 (252)
T ss_dssp CCCC-SCSSC--EEEEECTTSC-EEECCSCC
T ss_pred CCCc-cCCCC--EEEEEeCcCc-EecCCccc
Confidence 7210 01278 8888887665 34444433
No 322
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=69.30 E-value=10 Score=31.66 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 111 TKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 111 ~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
.+..|.+.+|.+.++++|+.++-||....+-++.++++.++.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence 346788899999999999999999999998888888887654
No 323
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=65.38 E-value=26 Score=22.96 Aligned_cols=52 Identities=17% Similarity=0.238 Sum_probs=35.4
Q ss_pred HHHHHHHHcCcEEEEEeCCCHH----HHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 119 DSYEKFKKAGAEVIGISGDDSS----SHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 119 ~l~~~~~~~~v~vv~vs~d~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
+..+..+.....+|-+..|.++ .+..+++.+++++..+.....++....|..
T Consensus 22 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~ 77 (99)
T 3j21_Z 22 ETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGKP 77 (99)
T ss_dssp HHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGGGTTCST
T ss_pred HHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHHCCC
Confidence 3334445445778888777654 455666788898766656677888888876
No 324
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=64.69 E-value=29 Score=23.36 Aligned_cols=39 Identities=26% Similarity=0.247 Sum_probs=30.0
Q ss_pred EEEEEcCCCCh--hh----HHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 98 VVYFYPADETP--GC----TKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 98 ll~f~~a~~C~--~C----~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
+-.|=|+-||. .| ..++-.+....+.++++|++|--.+.
T Consensus 7 i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL 51 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNL 51 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEET
T ss_pred EEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 44566788887 35 57888888888888888888887775
No 325
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=62.84 E-value=36 Score=25.00 Aligned_cols=35 Identities=11% Similarity=-0.055 Sum_probs=26.3
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 99 VYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 99 l~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
|+||.-.-||.|-.-.+.|.++.+++. ++|.....
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~---~~v~~~p~ 37 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG---LTIRYNAI 37 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC---CEEEEEEC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC---CeEEEEee
Confidence 344437889999999999999988874 66665543
No 326
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=62.51 E-value=36 Score=23.58 Aligned_cols=54 Identities=17% Similarity=0.190 Sum_probs=38.5
Q ss_pred HcCcEEEEEeCCCHHHHHHHHHHcCCCeEEE-EcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEe
Q 028030 126 KAGAEVIGISGDDSSSHKAFAKKYRLPYTLL-SDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 126 ~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
..|+..+.+.++|.+++.+.+++.|+++..- .+.. ..+..++.|++|.++..+.
T Consensus 96 ~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~-----------------~g~~~~f~DPdGn~iel~q 150 (155)
T 4g6x_A 96 ADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMG-----------------PVVTAILDDTCGNLIQLMQ 150 (155)
T ss_dssp HTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECS-----------------SCEEEEEECSSSCEEEEEE
T ss_pred cCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcC-----------------CeEEEEEECCCCCEEEEEE
Confidence 3467778888999998888899999886432 1110 0125788999999987764
No 327
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=59.63 E-value=10 Score=30.36 Aligned_cols=62 Identities=15% Similarity=0.232 Sum_probs=38.1
Q ss_pred CCCCCeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHH-HHHHHHHHH---HcCcEEEEEeCCCHHH
Q 028030 72 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACA-FRDSYEKFK---KAGAEVIGISGDDSSS 141 (215)
Q Consensus 72 ~~~P~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~-l~~l~~~~~---~~~v~vv~vs~d~~~~ 141 (215)
+.+|-|.++|.+|.++-.+. .++-+.++|+ +..+... |+++.+... ..+++|+.|+.+....
T Consensus 75 ~~VPVF~Itn~~G~Pll~~~-~~~~V~~fF~-------s~~DA~a~L~el~k~~~~~~~~~~kV~pvsL~kvy~ 140 (279)
T 4e6z_A 75 EVIPVFLITNYNSSPYIFQE-NEKQVCYMFL-------CPYDAENMLNDMIKYNGMKYNGNIKIHNITMKKAYE 140 (279)
T ss_dssp TTSEEEEEECTTCCBCCEEE-TTEEEEEEES-------SHHHHHHHHHHHHHHCHHHHTTSCEEEEEEHHHHHH
T ss_pred cCCCEEEEEcCCCCEEEecC-CCCeEEEEEC-------CHHHHHHHHHHHHhccCcccccCceEEEecHHHHHH
Confidence 68999999999999876543 3344555554 2333332 234322211 2469999999876643
No 328
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=56.27 E-value=12 Score=32.97 Aligned_cols=22 Identities=23% Similarity=0.428 Sum_probs=16.2
Q ss_pred EEEEEEcCCCChhhHHHHHHHHH
Q 028030 97 VVVYFYPADETPGCTKQACAFRD 119 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~ 119 (215)
-++.|. ..|||+|.+....|.+
T Consensus 19 ~v~vy~-~~~Cp~C~~~k~~L~~ 40 (598)
T 2x8g_A 19 AVILFS-KTTCPYCKKVKDVLAE 40 (598)
T ss_dssp SEEEEE-CTTCHHHHHHHHHHHH
T ss_pred CEEEEE-CCCChhHHHHHHHHHH
Confidence 356677 8999999977666554
No 329
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=56.01 E-value=13 Score=31.39 Aligned_cols=91 Identities=18% Similarity=0.358 Sum_probs=0.0
Q ss_pred Chhh-HHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcC----CCeEEE----EcCChhHHHHhCCCccCCCCC
Q 028030 107 TPGC-TKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR----LPYTLL----SDEGNKVRKEWGVPADFFGSL 177 (215)
Q Consensus 107 C~~C-~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~----~~~~~~----~d~~~~~~~~~g~~~~~~g~~ 177 (215)
||.| +.++..++.++++..+. -.+.+..|..++. ++.-+. ..+...-...+|+...-.|..
T Consensus 297 CPtCGRt~~d~~~~la~~v~~~----------l~~~~~~~~~~~~~~~~l~VAVMGCvVNGPGEa~~ADiGi~~~G~G~~ 366 (406)
T 4g9p_A 297 CPGCGRTTSTFFQELAEEVSRR----------LKERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEE 366 (406)
T ss_dssp CCCCTTSCHHHHHHHHHHHHHH----------HHHHHHHHHHHSTTGGGCEEEEESSTTTHHHHHHHSSEEEECCCTTSC
T ss_pred CCCCCcCcchHHHHHHHHHHHH----------HhhhhhhhhhccCCCCCCEEEEECCcccCcchhhhcCcCcccCCCCCC
Q ss_pred CccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 178 PGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 178 p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
| ...++ .+|+++....+ +..++++++.+++
T Consensus 367 ~--~~~lf-~~G~~~~~v~~----~~iv~~l~~~i~~ 396 (406)
T 4g9p_A 367 P--KAPVY-ADGKLLTILKG----EGIAEEFLRLVED 396 (406)
T ss_dssp S--EEEEE-ETTEEEEEEES----SCHHHHHHHHHHH
T ss_pred C--eeeEE-ECCEEEEecCH----HHHHHHHHHHHHH
No 330
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=55.09 E-value=4.2 Score=28.06 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=27.2
Q ss_pred CcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 95 KPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 95 k~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
|.+||-|. -+-|+.|...-..|.++.++ .+++-|+.
T Consensus 2 K~tLILfG-KP~C~vCe~~s~~l~~lede-----Y~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFG-KPYCSICENVSDAVEELKSE-----YDILHVDI 37 (124)
T ss_dssp CEEEEEEE-CTTCHHHHHHHHHHHTTTTT-----EEEEEEEC
T ss_pred CceEEEeC-CCccHHHHHHHHHHHHhhcc-----ccEEEEEe
Confidence 67899999 99999999888777555433 56666653
No 331
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=52.72 E-value=44 Score=21.59 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCCeEEE-EcCChhHHHHh-----CCCccCCCCCCccEEEEEcCCCcEE
Q 028030 140 SSHKAFAKKYRLPYTLL-SDEGNKVRKEW-----GVPADFFGSLPGRQTYILDKNGVVQ 192 (215)
Q Consensus 140 ~~~~~~~~~~~~~~~~~-~d~~~~~~~~~-----g~~~~~~g~~p~~~~~lid~~G~v~ 192 (215)
..+++++++.+++|..+ .|.+......+ |... +| .+ ++ +|+.+
T Consensus 30 ~~ak~~L~~~~i~y~~idI~~~~~~~~~l~~~~~g~~~-----vP--~i-fi--~g~~i 78 (99)
T 3qmx_A 30 MRALALLKRKGVEFQEYCIDGDNEAREAMAARANGKRS-----LP--QI-FI--DDQHI 78 (99)
T ss_dssp HHHHHHHHHHTCCCEEEECTTCHHHHHHHHHHTTTCCC-----SC--EE-EE--TTEEE
T ss_pred HHHHHHHHHCCCCCEEEEcCCCHHHHHHHHHHhCCCCC-----CC--EE-EE--CCEEE
Confidence 68899999999998765 45554444333 5554 88 55 45 56654
No 332
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=52.51 E-value=1 Score=22.88 Aligned_cols=20 Identities=20% Similarity=0.208 Sum_probs=17.8
Q ss_pred ChhhHHHHHHHHHHHHHHHH
Q 028030 107 TPGCTKQACAFRDSYEKFKK 126 (215)
Q Consensus 107 C~~C~~~~~~l~~l~~~~~~ 126 (215)
|+.|+..+|.++.+...|.+
T Consensus 6 CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 6 CPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CTTSSCEESSHHHHHHHHHH
T ss_pred CccccccCcChHHHHHHHHH
Confidence 99999999999998888775
No 333
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=51.66 E-value=53 Score=22.23 Aligned_cols=38 Identities=18% Similarity=0.336 Sum_probs=22.9
Q ss_pred EEEEcCCCCh--hh----HHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 99 VYFYPADETP--GC----TKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 99 l~f~~a~~C~--~C----~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
-.|=++-||. .| -.++-.+....+.++++|++|--.+.
T Consensus 5 ~ifepamCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL 48 (110)
T 3kgk_A 5 MVFDPAMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQIERFNL 48 (110)
T ss_dssp EEEECC-------------CHHHHHHHHHHHHHHHTCCEEEEET
T ss_pred EEecchhccccCCcCCCCCHHHHHHHHHHHHHHHCCCeEEEEcc
Confidence 3455677765 35 35677777777888888888888776
No 334
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=50.84 E-value=54 Score=22.09 Aligned_cols=59 Identities=12% Similarity=0.118 Sum_probs=38.1
Q ss_pred HHHHcCcEEEEEeCCCH----HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcC
Q 028030 123 KFKKAGAEVIGISGDDS----SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDK 187 (215)
Q Consensus 123 ~~~~~~v~vv~vs~d~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~ 187 (215)
..+.....+|-+..|-+ ..+..+++.+++++..+.+...++..+.|.... .- .+.++|+
T Consensus 37 ai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~Gk~~~----v~--~vaI~D~ 99 (112)
T 3iz5_f 37 TLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYR----VC--CLSILDP 99 (112)
T ss_dssp HHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHHCTTCS----SC--EEEEECC
T ss_pred HHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHhCCccc----eE--EEEEecc
Confidence 33333466666666543 456677788888888775667789999988631 22 4666664
No 335
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=50.71 E-value=49 Score=21.59 Aligned_cols=52 Identities=17% Similarity=0.237 Sum_probs=35.8
Q ss_pred HHHHHHHHcCcEEEEEeCCCHH----HHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 119 DSYEKFKKAGAEVIGISGDDSS----SHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 119 ~l~~~~~~~~v~vv~vs~d~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
+..+..+.....+|-+..|.++ .+..+++.+++++..+.....++....|..
T Consensus 23 ~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG~a~G~~ 78 (101)
T 1w41_A 23 KSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELGTLLGRP 78 (101)
T ss_dssp HHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTCS
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHHHHhCCC
Confidence 3344445445788888887654 445566778888776656778899999886
No 336
>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*
Probab=50.65 E-value=57 Score=23.16 Aligned_cols=54 Identities=22% Similarity=0.250 Sum_probs=37.0
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
|+.-+++.++|-+.+.+.+++.|+.+.. .+.. + . . ....++.|++|.++..+..
T Consensus 127 g~~hl~f~v~dv~~~~~~l~~~G~~~~~--~~~~------~-~------~-~~~~~~~DPdG~~iel~~~ 180 (187)
T 3vw9_A 127 GFGHIGIAVPDVYSACKRFEELGVKFVK--KPDD------G-K------M-KGLAFIQDPDGYWIEILNP 180 (187)
T ss_dssp BEEEEEEECSCHHHHHHHHHHTTCCEEE--CTTS------S-S------S-TTCEEEECTTCCEEEEECG
T ss_pred ceeEEEEEECCHHHHHHHHHHCCCeEee--CCcc------C-C------c-ceEEEEECCCCCEEEEEEc
Confidence 5678888888888888888888877543 1110 0 0 1 1147889999999987754
No 337
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=49.70 E-value=83 Score=23.91 Aligned_cols=57 Identities=9% Similarity=0.119 Sum_probs=34.3
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
.++++|-|+ ..+ |....+.+.+.++++++. +.+..+ .+.++++.|++.
T Consensus 25 ~~v~vVgff-~~~---~~~~~~~F~~~A~~lr~~-~~F~~t------------------------~~~~v~~~~~v~--- 72 (250)
T 3ec3_A 25 DDVVILGVF-QGV---GDPGYLQYQDAANTLRED-YKFHHT------------------------FSTEIAKFLKVS--- 72 (250)
T ss_dssp SSCEEEEEC-SCT---TCHHHHHHHHHHHHHTTT-CCEEEE------------------------CCHHHHHHHTCC---
T ss_pred CCeEEEEEE-cCC---CchHHHHHHHHHHhhhcC-cEEEEE------------------------CcHHHHHHcCCC---
Confidence 356677777 655 345666677777776653 333322 245677778776
Q ss_pred CCCCCccEEEEEcC
Q 028030 174 FGSLPGRQTYILDK 187 (215)
Q Consensus 174 ~g~~p~~~~~lid~ 187 (215)
.| .++++-+
T Consensus 73 ---~p--~ivlfk~ 81 (250)
T 3ec3_A 73 ---LG--KLVLMQP 81 (250)
T ss_dssp ---SS--EEEEECC
T ss_pred ---CC--eEEEEec
Confidence 35 7777754
No 338
>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1
Probab=49.53 E-value=57 Score=21.96 Aligned_cols=49 Identities=18% Similarity=0.141 Sum_probs=35.3
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEE-EEEcCCCcEEEEEe
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQT-YILDKNGVVQLIYN 196 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~-~lid~~G~v~~~~~ 196 (215)
++.-+++.++|.+++.+.+++.|..+..- +| .. .. ++.|++|.++....
T Consensus 77 ~~~h~~f~v~d~~~~~~~l~~~G~~~~~~----------~g--------~~--~~~~~~DPdG~~iel~~ 126 (144)
T 2c21_A 77 AYGHIAIGVEDVKELVADMRKHDVPIDYE----------DE--------SG--FMAFVVDPDGYYIELLN 126 (144)
T ss_dssp SEEEEEEEESCHHHHHHHHHHTTCCEEEE----------CS--------SS--SEEEEECTTSCEEEEEE
T ss_pred CceEEEEEeCCHHHHHHHHHHCCCEEecc----------CC--------cE--EEEEEECCCCCEEEEEE
Confidence 56778888888888888888888774321 22 22 34 88999999987764
No 339
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=48.73 E-value=48 Score=22.81 Aligned_cols=52 Identities=15% Similarity=0.066 Sum_probs=35.5
Q ss_pred cEEEEEeCCCHHHHHHHHHHcCCCeEEE-EcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 129 AEVIGISGDDSSSHKAFAKKYRLPYTLL-SDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 129 v~vv~vs~d~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
..-+++.+++.+++.+.+++.|..+..- .+. .+| +..++.|++|.++.....
T Consensus 66 ~~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~~------~~G-----------~~~~~~DPdG~~iel~~~ 118 (144)
T 3r6a_A 66 NTQATFLVDSLDKFKTFLEENGAEIIRGPSKV------PTG-----------RNMTVRHSDGSVIEYVEH 118 (144)
T ss_dssp GCCEEEEESCHHHHHHHHHHTTCEEEEEEEEE------TTE-----------EEEEEECTTSCEEEEEEE
T ss_pred ceEEEEEeCCHHHHHHHHHHcCCEEecCCccC------CCc-----------eEEEEECCCCCEEEEEEc
Confidence 3556777788888888888888774321 110 011 268999999999987654
No 340
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=48.58 E-value=16 Score=27.06 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHcCCCeEEE------------EcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCCCCc
Q 028030 136 GDDSSSHKAFAKKYRLPYTLL------------SDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQPEK 203 (215)
Q Consensus 136 ~d~~~~~~~~~~~~~~~~~~~------------~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~~~~ 203 (215)
..+.+.+.+++++.|++..-+ .+.+.+.+..+|+.+ +| +++++ .+|+.+....|.... +
T Consensus 129 ~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g-----~P--t~~i~-~~G~~~~~~~G~~~~-~ 199 (216)
T 2in3_A 129 VAQLAILKKLAVDLGIPESRFTPVFQSDEAKQRTLAGFQRVAQWGISG-----FP--ALVVE-SGTDRYLITTGYRPI-E 199 (216)
T ss_dssp TTSHHHHHHHHHHTTCCHHHHHHHHHSHHHHHHHHHHHHHHHHTTCCS-----SS--EEEEE-ETTEEEEEESSCCCH-H
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHhcchHHHHHHHHHHHHHHHcCCcc-----cc--eEEEE-ECCEEEEeccCCCCH-H
Confidence 356788888888888763211 112345677889987 89 55444 578865566664332 3
Q ss_pred cHHHHHH
Q 028030 204 HIDETLK 210 (215)
Q Consensus 204 ~~~~il~ 210 (215)
.+.++++
T Consensus 200 ~l~~~l~ 206 (216)
T 2in3_A 200 ALRQLLD 206 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444443
No 341
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=47.97 E-value=7.3 Score=32.40 Aligned_cols=16 Identities=6% Similarity=-0.083 Sum_probs=11.1
Q ss_pred EEEEEcCCCChhhHHHH
Q 028030 98 VVYFYPADETPGCTKQA 114 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~ 114 (215)
|+.|. .+||++|.+..
T Consensus 263 VvVYs-k~~CPyC~~Ak 278 (362)
T 2jad_A 263 IFVAS-KTYCPYSHAAL 278 (362)
T ss_dssp EEEEE-CTTCHHHHHHH
T ss_pred EEEEE-cCCCcchHHHH
Confidence 45556 78888888654
No 342
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=47.71 E-value=35 Score=25.66 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEE
Q 028030 118 RDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLS 157 (215)
Q Consensus 118 ~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 157 (215)
.+..++++++|+.++-+|......++.+++..++..+++.
T Consensus 28 ~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~ 67 (227)
T 1l6r_A 28 IESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFG 67 (227)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEE
Confidence 3334555667999999999999999999998888754443
No 343
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=46.48 E-value=56 Score=21.13 Aligned_cols=53 Identities=9% Similarity=0.170 Sum_probs=33.9
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEE
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIY 195 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~ 195 (215)
|+.-+++.++|.+++.+.+++.|+.+.-.... ... | . ...++.|++|.++..+
T Consensus 81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~--------~~~----g-~--~~~~~~DPdG~~iel~ 133 (134)
T 3l7t_A 81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYD--------DYT----G-K--KMAFFFDPDGLPLELH 133 (134)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHTCCCCCCEEC--------TTS----C-C--EEEEEECTTCCEEEEE
T ss_pred CeEEEEEEECCHHHHHHHHHhCCCcccceecc--------CCC----c-e--EEEEEECCCCCEEEEe
Confidence 56677888888888888888877764211100 000 1 2 2688999999987653
No 344
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=45.75 E-value=97 Score=23.53 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=40.8
Q ss_pred CCCcEEEEEEcCCCC---hhh-HHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhC
Q 028030 93 KGKPVVVYFYPADET---PGC-TKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWG 168 (215)
Q Consensus 93 ~gk~~ll~f~~a~~C---~~C-~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 168 (215)
.|++.++.|+..+.+ ..+ ......+.+++++|+ .+.++.+..++ .+...+.||
T Consensus 131 ~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--ki~F~~~d~~~---------------------~~~~l~~fg 187 (250)
T 3ec3_A 131 SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--EYTFAIADEED---------------------YATEVKDLG 187 (250)
T ss_dssp CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--TSEEEEEETTT---------------------THHHHHHTT
T ss_pred ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--ceeEEEEcHHH---------------------HHHHHHHcC
Confidence 467777777633433 223 345677777777777 37777775432 123345667
Q ss_pred CCccCCCCCCccEEEEEcCCCc
Q 028030 169 VPADFFGSLPGRQTYILDKNGV 190 (215)
Q Consensus 169 ~~~~~~g~~p~~~~~lid~~G~ 190 (215)
+... +..| .++++|.+|+
T Consensus 188 l~~~--~~~p--~~~~~~~~~~ 205 (250)
T 3ec3_A 188 LSES--GGDV--NAAILDESGK 205 (250)
T ss_dssp CSSC--SCSC--EEEEECTTSC
T ss_pred CCcc--CCCc--EEEEEcCCCc
Confidence 7531 1124 7888887664
No 345
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=44.90 E-value=65 Score=21.27 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=31.0
Q ss_pred HHHHHcCcEEEEEeCCCH----HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 122 EKFKKAGAEVIGISGDDS----SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 122 ~~~~~~~v~vv~vs~d~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
+..+.....+|-+..|-+ ..+..+++.+++++..+.+...++..+.|...
T Consensus 32 kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~A~Gk~~ 85 (105)
T 3u5e_c 32 KSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLF 85 (105)
T ss_dssp HHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSS
T ss_pred HHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHhCCcc
Confidence 333433466666666543 34566667777776644566778888888763
No 346
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=44.55 E-value=78 Score=22.09 Aligned_cols=69 Identities=12% Similarity=0.240 Sum_probs=39.5
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccC
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADF 173 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~ 173 (215)
+.++++.+|....-..-....+.+.+++++++++ +.++.|..+..+ .+.+...||+..+
T Consensus 31 ~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk-i~Fv~vd~~~~~-------------------~~~~l~~fGl~~~- 89 (147)
T 3bj5_A 31 EIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFAFIDSDHTD-------------------NQRILEFFGLKKE- 89 (147)
T ss_dssp SCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT-CEEEEECTTCGG-------------------GHHHHHHTTCCGG-
T ss_pred CCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc-eEEEEEecchHh-------------------HHHHHHHcCCCcc-
Confidence 3444444441222233455677888888888764 777777643221 2245667777642
Q ss_pred CCCCCccEEEEEcC
Q 028030 174 FGSLPGRQTYILDK 187 (215)
Q Consensus 174 ~g~~p~~~~~lid~ 187 (215)
.+| .+.+++.
T Consensus 90 --~~P--~v~i~~~ 99 (147)
T 3bj5_A 90 --ECP--AVRLITL 99 (147)
T ss_dssp --GCS--EEEEEEC
T ss_pred --cCC--EEEEEec
Confidence 278 7777774
No 347
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=44.02 E-value=29 Score=24.55 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=31.1
Q ss_pred HHHHHHHHcCcEEEEEeCCC---HHHHHHHHHHcCCCeEEEEcC
Q 028030 119 DSYEKFKKAGAEVIGISGDD---SSSHKAFAKKYRLPYTLLSDE 159 (215)
Q Consensus 119 ~l~~~~~~~~v~vv~vs~d~---~~~~~~~~~~~~~~~~~~~d~ 159 (215)
+..++++++|..++-++.-. ...+.+|++++++++..+...
T Consensus 31 ~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n 74 (142)
T 2obb_A 31 ETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKD 74 (142)
T ss_dssp HHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSS
T ss_pred HHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcC
Confidence 33455567799999988765 578899999999998776543
No 348
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=43.59 E-value=62 Score=20.74 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=33.6
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEE
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIY 195 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~ 195 (215)
|+.-+++.+++.+++.+.+++.|+.+...... ..+ | .. ..++.|++|.++...
T Consensus 73 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~-----~~~-------g-~~--~~~~~DPdG~~iel~ 125 (126)
T 2p25_A 73 GLRHLAFKVEHIEEVIAFLNEQGIETEPLRVD-----DFT-------G-KK--MTFFFDPDGLPLELH 125 (126)
T ss_dssp SCCCEEEECSCHHHHHHHHHHTTCCCCCCEEC-----TTT-------C-CE--EEEEECTTCCEEEEE
T ss_pred cceEEEEEeCCHHHHHHHHHHcCCcccccccc-----CCC-------C-cE--EEEEECCCCCEEEee
Confidence 56667788888888888888887764211000 001 1 22 678899999987653
No 349
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=43.26 E-value=16 Score=24.29 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCC
Q 028030 111 TKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRL 151 (215)
Q Consensus 111 ~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~ 151 (215)
....|.+.++.++++++|+.+.-+|......++..++..++
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 34667788888888888999988887666555556665543
No 350
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=43.01 E-value=1.1e+02 Score=23.23 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 117 FRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 117 l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
..+..+++.++|+.++..+.-....+.++++..+++
T Consensus 27 ~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 62 (279)
T 3mpo_A 27 TIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDID 62 (279)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 344445566779999999988888888999888775
No 351
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=42.73 E-value=25 Score=23.51 Aligned_cols=15 Identities=20% Similarity=0.270 Sum_probs=13.4
Q ss_pred EEEEEcCCCcEEEEE
Q 028030 181 QTYILDKNGVVQLIY 195 (215)
Q Consensus 181 ~~~lid~~G~v~~~~ 195 (215)
++.|||++|+|++.-
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 799999999999765
No 352
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=41.24 E-value=12 Score=27.01 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=54.7
Q ss_pred CeEEeCCCCCeeecCCcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHH------------------------HHHc----
Q 028030 76 SFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEK------------------------FKKA---- 127 (215)
Q Consensus 76 ~f~l~~~~g~~~~l~~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~------------------------~~~~---- 127 (215)
.+++.+..|+.+=+ .+.+-|+.+||+.|..++..+.+..++ |.++
T Consensus 24 ~v~l~d~~Gk~vll-------~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~ 96 (170)
T 4hde_A 24 PFGTKDLKGKVWVA-------DFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTED 96 (170)
T ss_dssp EEEHHHHTTSCEEE-------EEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSC
T ss_pred EEeHHHhCCCEEEE-------EEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCC
Confidence 47788889987655 345667668999999999988776532 2211
Q ss_pred CcEEEEEeCCCHHHHHHHHHH-cCC-------------CeEEEEcCChhHHHHh
Q 028030 128 GAEVIGISGDDSSSHKAFAKK-YRL-------------PYTLLSDEGNKVRKEW 167 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~-~~~-------------~~~~~~d~~~~~~~~~ 167 (215)
...+..++.++.+.+.++... ++. +..++.|+++.+...|
T Consensus 97 ~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~ 150 (170)
T 4hde_A 97 TSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKY 150 (170)
T ss_dssp CTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEE
T ss_pred CCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEE
Confidence 234666777777776666543 322 1346677776655444
No 353
>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*
Probab=40.45 E-value=95 Score=21.91 Aligned_cols=54 Identities=22% Similarity=0.218 Sum_probs=36.9
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
|+.-+++.+++.+.+.+.+++.|+.+.. .+.. + .. .. ..++.|++|.++.....
T Consensus 124 g~~hi~f~v~dvd~~~~~l~~~G~~~~~--~p~~------~-~~-----~~--~~~~~DPdG~~iel~~~ 177 (184)
T 2za0_A 124 GFGHIGIAVPDVYSACKRFEELGVKFVK--KPDD------G-KM-----KG--LAFIQDPDGYWIEILNP 177 (184)
T ss_dssp CEEEEEEECSCHHHHHHHHHHTTCCEEE--CTTS------S-SS-----TT--CEEEECTTCCEEEEECT
T ss_pred CeeEEEEEeCCHHHHHHHHHHCCCeeec--CCcC------C-Cc-----ee--EEEEECCCCCEEEEEec
Confidence 5677888888888888888888877532 2211 0 00 12 57889999999987754
No 354
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=39.72 E-value=9.6 Score=33.53 Aligned_cols=36 Identities=14% Similarity=0.325 Sum_probs=29.5
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCc--CCCcEEEEEE
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKF--KGKPVVVYFY 102 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~--~gk~~ll~f~ 102 (215)
...+|..+||+.+.+.+|.+..|.++ .|+++||+|-
T Consensus 444 ~~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~ 481 (570)
T 3fmw_A 444 HPWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLA 481 (570)
T ss_dssp CSSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSS
T ss_pred CccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEec
Confidence 45689999999998888886777775 4689999985
No 355
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=39.60 E-value=78 Score=20.67 Aligned_cols=49 Identities=18% Similarity=0.359 Sum_probs=33.2
Q ss_pred HHHHHcCcEEEEEeCCCH----HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 122 EKFKKAGAEVIGISGDDS----SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 122 ~~~~~~~v~vv~vs~d~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
+..+.....+|-+..|-+ ..+..+++.+++++..+ ....++..+.|...
T Consensus 29 kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~-~s~~eLG~A~Gk~~ 81 (101)
T 3v7q_A 29 KEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV-ESRAVLGRSIGKEA 81 (101)
T ss_dssp HHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE-SCHHHHHHHTTSSC
T ss_pred HHHhcCceeEEEEeccccccchhhhcccccccCCCeeee-chHHHHHhhhCccc
Confidence 334444467777776643 35666678888988776 56678888888864
No 356
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=38.38 E-value=76 Score=23.14 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 114 ACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 114 ~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
.|...++.+.++++|+.+.-+|......++.+++.+++.
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 566677777778888988888888888888888888876
No 357
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=38.27 E-value=81 Score=20.52 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=35.1
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++.-+++.+++.+++.+.+++.|..+..-.... .+|. .. ..++.|++|.++.....
T Consensus 71 ~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~-----~~g~-------~~--~~~~~DPdG~~iel~~~ 126 (135)
T 1f9z_A 71 AYGHIALSVDNAAEACEKIRQNGGNVTREAGPV-----KGGT-------TV--IAFVEDPDGYKIELIEE 126 (135)
T ss_dssp SEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEC-----TTSC-------CE--EEEEECTTSCEEEEEEC
T ss_pred CccEEEEEeCCHHHHHHHHHHCCCEEecCCccC-----CCCc-------ee--EEEEECCCCCEEEEEec
Confidence 556677777887777777777777643211000 1121 12 57889999999887654
No 358
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=37.44 E-value=19 Score=17.24 Aligned_cols=15 Identities=13% Similarity=0.085 Sum_probs=12.7
Q ss_pred EEEEEcCCCcEEEEE
Q 028030 181 QTYILDKNGVVQLIY 195 (215)
Q Consensus 181 ~~~lid~~G~v~~~~ 195 (215)
...++|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 478899999998765
No 359
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=37.04 E-value=29 Score=28.20 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHH----cCCC
Q 028030 112 KQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKK----YRLP 152 (215)
Q Consensus 112 ~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~----~~~~ 152 (215)
...|.+.+|.+.++++|++++-||....+-++.+.+. ||++
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp 187 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAK 187 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCC
Confidence 4567788899999999999999999999999999986 5554
No 360
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=36.93 E-value=88 Score=22.08 Aligned_cols=54 Identities=17% Similarity=0.076 Sum_probs=27.4
Q ss_pred CcCCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEE-EeC---CCHHHHHHHHHHcCC
Q 028030 91 KFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIG-ISG---DDSSSHKAFAKKYRL 151 (215)
Q Consensus 91 ~~~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~-vs~---d~~~~~~~~~~~~~~ 151 (215)
+++||.++++.. .-|.+. ...+..|+++. + +..++. +.+ .+.+++++|+++.++
T Consensus 105 ~l~gk~v~~f~t-~g~~~~-g~~~~~l~~~l---~--~~~~~~g~~~~g~~~~~~v~~W~~~~~~ 162 (162)
T 3klb_A 105 DFAGKIVVPFAT-SGGSGI-GNCEKNLHKAY---P--DIVWKDGKLLNGQITRDLVTEWFEKIRL 162 (162)
T ss_dssp CCTTCEEEEEEE-CSSCCS-HHHHHHHHHHC---T--TSEECCCEECCSCCCHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEEE-eCCCCc-cHHHHHHHHHc---C--CCEeecceEEeCCCCHHHHHHHHHHhCC
Confidence 456777665555 444332 23333444433 2 234432 333 356778888887653
No 361
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=36.84 E-value=88 Score=21.51 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=26.2
Q ss_pred HHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 119 DSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 119 ~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
+..++++++|+.++-+|......++.+++.+++.
T Consensus 43 ~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 43 IGIKLLQKMGITLAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence 4445556678998888888888888888888876
No 362
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=35.98 E-value=1e+02 Score=20.86 Aligned_cols=42 Identities=17% Similarity=0.319 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHH---HcCCCeEEEEc
Q 028030 116 AFRDSYEKFKKAGAEVIGISGDDSSSHKAFAK---KYRLPYTLLSD 158 (215)
Q Consensus 116 ~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~---~~~~~~~~~~d 158 (215)
.++++.++|+... .++-|+.|+.+-++.|++ +.|+...+++.
T Consensus 67 nireiwerypqld-vvvivttddkewikdfieeakergvevfvvyn 111 (162)
T 2l82_A 67 NIREIWERYPQLD-VVVIVTTDDKEWIKDFIEEAKERGVEVFVVYN 111 (162)
T ss_dssp HHHHHHHHCTTCC-EEEEEECCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHhCCCCc-EEEEEecCcHHHHHHHHHHHHhcCcEEEEEec
Confidence 4566666666532 233467788777777775 56677555543
No 363
>2jnb_A NHP2-like protein 1; splicing, KINK-turn RNA-binding protein, NHPX, RNA binding protein; NMR {Homo sapiens} SCOP: d.79.3.1
Probab=35.96 E-value=73 Score=22.57 Aligned_cols=58 Identities=17% Similarity=0.309 Sum_probs=36.1
Q ss_pred HHcCcEEEEEeCCCHH-H----HHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCC
Q 028030 125 KKAGAEVIGISGDDSS-S----HKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNG 189 (215)
Q Consensus 125 ~~~~v~vv~vs~d~~~-~----~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G 189 (215)
+.....+|-|..|-+. + +..+++++++++..+. ...++.+..|... +.-.+.++|+++
T Consensus 63 ~~gkakLVIIA~D~~p~e~~~~l~~lC~~~~VP~~~v~-sk~eLG~a~Gk~~------~vs~vaI~~~~~ 125 (144)
T 2jnb_A 63 NRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVR-SKQALGRACGVSR------PVIACSVTIKEG 125 (144)
T ss_dssp HHTCEEEEEEETTCSCHHHHTTSCSSCGGGCCCCEEES-CSHHHHHHHTCSS------CCSEEEEECCTT
T ss_pred HhCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEC-CHHHHHHHhCCCC------ceEEEEEEeCCc
Confidence 3334677777766332 2 3345567888876654 6678999999873 422466776543
No 364
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=35.70 E-value=1.1e+02 Score=21.23 Aligned_cols=55 Identities=20% Similarity=0.279 Sum_probs=37.3
Q ss_pred CcEEEEEeCC--CH---HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCC
Q 028030 128 GAEVIGISGD--DS---SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNG 189 (215)
Q Consensus 128 ~v~vv~vs~d--~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G 189 (215)
...+|-+..| .. ..+..+++.+++++..+ ....++....|... +.-.+.++|+++
T Consensus 57 kaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v-~sk~eLG~a~G~~~------~v~~vaI~d~~~ 116 (135)
T 2aif_A 57 IAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFV-RSKVALGRACGVSR------PVIAAAITSKDG 116 (135)
T ss_dssp CEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEE-SCHHHHHHHTTCSS------CCSEEEEECCTT
T ss_pred CCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEE-CCHHHHHHHhCCCC------cEEEEEEEcCCc
Confidence 4666666655 32 45667788899998655 56678999999873 322577777654
No 365
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=35.35 E-value=97 Score=20.54 Aligned_cols=49 Identities=16% Similarity=0.202 Sum_probs=33.7
Q ss_pred HHHHHcCcEEEEEeCCCHH----HHHHHHHHcCCCeEEEEcCChhHHHHhCCC
Q 028030 122 EKFKKAGAEVIGISGDDSS----SHKAFAKKYRLPYTLLSDEGNKVRKEWGVP 170 (215)
Q Consensus 122 ~~~~~~~v~vv~vs~d~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~ 170 (215)
+..+.....+|-+..|-++ .+..+++.+++++..+.....++....|..
T Consensus 31 kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~G~~ 83 (110)
T 3cpq_A 31 KFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVCGKP 83 (110)
T ss_dssp HHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHTTCS
T ss_pred HHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHhCCc
Confidence 3344444777777777543 455667788888776656677899999886
No 366
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=34.61 E-value=38 Score=23.68 Aligned_cols=34 Identities=21% Similarity=0.103 Sum_probs=21.7
Q ss_pred CCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHh
Q 028030 175 GSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQ 213 (215)
Q Consensus 175 g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~ 213 (215)
|..| ..+++|.+|+++....=... +.+++.++|+
T Consensus 54 Ga~P--~LvL~D~~G~e~E~I~Iekw---~~d~I~efL~ 87 (129)
T 2a2p_A 54 GADP--ELVLLSRNYQELERIPLSQM---TRDEINALVQ 87 (129)
T ss_dssp SCCC--EEEEECSSSCCCEEEECSSS---CHHHHHHHHH
T ss_pred CCCC--EEEEecCCCCEEEEeecccC---CHHHHHHHHH
Confidence 3467 99999999998777544333 3344444443
No 367
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=34.44 E-value=97 Score=20.29 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=37.5
Q ss_pred HHHHHHHcCcEEEEEeCCCH----HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcC
Q 028030 120 SYEKFKKAGAEVIGISGDDS----SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDK 187 (215)
Q Consensus 120 l~~~~~~~~v~vv~vs~d~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~ 187 (215)
..+..+.....+|-+..|-+ ..+..+++.+++++..+.....++..+.|... +.-.+.++|+
T Consensus 30 v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~~------~~~~vaI~D~ 95 (104)
T 4a18_G 30 TIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYH------RCSTMAILDA 95 (104)
T ss_dssp HHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCSS------CCSEEEEEEC
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHhCCcc------CEEEEEEecc
Confidence 33344444467777776643 35556666777776644556778889998763 2124566664
No 368
>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}
Probab=34.39 E-value=1e+02 Score=20.61 Aligned_cols=61 Identities=10% Similarity=0.046 Sum_probs=36.6
Q ss_pred CcEEEEEeCCCHHHHHHHHHH-cCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGDDSSSHKAFAKK-YRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
|+. +++.+++.+++.+.+++ .|+.+..-... ..||..... ...+..++.|++|.++.....
T Consensus 74 g~~-~~~~v~dvd~~~~~l~~~~G~~~~~~~~~-----~~~g~~~~~---~~~~~~~~~DPdG~~iel~~~ 135 (145)
T 2rk9_A 74 GVN-FQWDVIDIEPLYQRVNESAADSIYLALES-----KSYQCGDSI---ATQKQFMVQTPDGYLFRFCQD 135 (145)
T ss_dssp TEE-EEEECSCHHHHHHHHHHHHGGGEEEEEEE-----EEC-----C---CEEEEEEEECTTCCEEEEEEC
T ss_pred ceE-EEEEECCHHHHHHHHHhhCCCeEecCccc-----cccccCCCC---CcceEEEEECCCCCEEEEEEc
Confidence 566 78888888888888888 88774321110 123320000 112367899999999887654
No 369
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=34.31 E-value=93 Score=20.03 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=21.5
Q ss_pred CCCeeecCCcCCCcEEEEEEcCCC--ChhhHHHHH
Q 028030 83 EGRNVSLSKFKGKPVVVYFYPADE--TPGCTKQAC 115 (215)
Q Consensus 83 ~g~~~~l~~~~gk~~ll~f~~a~~--C~~C~~~~~ 115 (215)
||-.+.+-++.+..+.|-|- +.| |+.....+.
T Consensus 26 dGGdvelv~v~~g~V~V~L~-GaC~gCpss~~TLk 59 (88)
T 1xhj_A 26 DGGDCTLVDVEDGIVKLQLH-GACGTCPSSTITLK 59 (88)
T ss_dssp HSCEEEEEECCSSEEEEEEE-SSCCSSCHHHHHHH
T ss_pred cCCeEEEEEEECCEEEEEEe-ecCCCCcchHHHHH
Confidence 67777887777778888887 554 444444444
No 370
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=34.22 E-value=1.2e+02 Score=21.09 Aligned_cols=51 Identities=31% Similarity=0.430 Sum_probs=33.7
Q ss_pred EEEEeCCCHHHHHHHHHHcCCCeEE-EEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 131 VIGISGDDSSSHKAFAKKYRLPYTL-LSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 131 vv~vs~d~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
.+++.++|.+.+.+.+++.|..+.. ..+. .+| . ...++.|++|.++.....
T Consensus 93 ~l~~~v~dvd~~~~~l~~~G~~~~~~~~~~------~~g--------~--~~~~~~DPdG~~iel~~~ 144 (164)
T 3m2o_A 93 ILNFEVDDPDREYARLQQAGLPILLTLRDE------DFG--------Q--RHFITADPNGVLIDIIKP 144 (164)
T ss_dssp EEEEECSCHHHHHHHHHHTTCCCSEEEEEC-----------------C--EEEEEECTTCCEEEEEC-
T ss_pred EEEEEECCHHHHHHHHHHCCCceecCcccc------CCC--------c--EEEEEECCCCCEEEEEEE
Confidence 4788888888888888888876521 1111 112 1 267899999999987654
No 371
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=33.97 E-value=1.2e+02 Score=22.12 Aligned_cols=36 Identities=8% Similarity=0.006 Sum_probs=20.0
Q ss_pred EEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 97 VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 97 ~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
-+|+++ ++..+.+. .+.+..+.+++.|+.+..|.+.
T Consensus 113 ~~ivll-TDG~~~~~----~~~~~~~~~~~~~i~v~~igig 148 (218)
T 3ibs_A 113 RAIIVI-TDGENHEG----GAVEAAKAAAEKGIQVSVLGVG 148 (218)
T ss_dssp EEEEEE-ECCTTCCS----CHHHHHHHHHTTTEEEEEEEES
T ss_pred cEEEEE-cCCCCCCC----cHHHHHHHHHhcCCEEEEEEec
Confidence 344444 45544333 3445556667778888877653
No 372
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=33.92 E-value=41 Score=27.53 Aligned_cols=42 Identities=14% Similarity=0.115 Sum_probs=23.6
Q ss_pred CCcEEEEEEcCCCChh-hHHHHHHHHHHHHHHHHcCcEEEEEeCC
Q 028030 94 GKPVVVYFYPADETPG-CTKQACAFRDSYEKFKKAGAEVIGISGD 137 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~-C~~~~~~l~~l~~~~~~~~v~vv~vs~d 137 (215)
+++++|.|+ ..+|.. |......+.+...++++ .+.++.+..+
T Consensus 236 ~~~~~v~f~-~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~ 278 (382)
T 2r2j_A 236 GLPFLILFH-MKEDTESLEIFQNEVARQLISEKG-TINFLHADCD 278 (382)
T ss_dssp CCCEEEEEE-CTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETT
T ss_pred CCcEEEEEe-cCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchH
Confidence 567777777 666533 33333445554444443 3777777643
No 373
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=33.77 E-value=92 Score=19.81 Aligned_cols=53 Identities=23% Similarity=0.312 Sum_probs=34.1
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEE-EEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEe
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTL-LSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
+...+++.+++.+++.+.+++.|.++.. ..+. .+| . +..++.|++|.++....
T Consensus 64 ~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~------~~g--------~--~~~~~~DPdG~~iel~~ 117 (119)
T 2pjs_A 64 DVPDLSIEVDNFDEVHARILKAGLPIEYGPVTE------AWG--------V--QRLFLRDPFGKLINILS 117 (119)
T ss_dssp CCCSEEEEESCHHHHHHHHHHTTCCCSEEEEEC------TTS--------C--EEEEEECTTSCEEEEEE
T ss_pred ceeEEEEEECCHHHHHHHHHHCCCccccCCccC------CCc--------c--EEEEEECCCCCEEEEEe
Confidence 3455667778888888888888876422 1111 022 2 26889999999987653
No 374
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=33.17 E-value=67 Score=19.35 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=23.1
Q ss_pred EEEEEcCCCcEEEEEeCCCCCCccHHHHHHHHhc
Q 028030 181 QTYILDKNGVVQLIYNNQFQPEKHIDETLKFLQS 214 (215)
Q Consensus 181 ~~~lid~~G~v~~~~~g~~~~~~~~~~il~~l~~ 214 (215)
+.-|.+.||+|+....+ +........-++.|++
T Consensus 14 rfrLka~NGevI~sSe~-Y~sk~~a~~gI~sVk~ 46 (64)
T 3bid_A 14 RWRLKAANHEIIAQGEG-YTSKQNCQHAVDLLKS 46 (64)
T ss_dssp EEEEECTTSCEEEECCC-BSCHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCEEEECCC-cCCHHHHHHHHHHHHH
Confidence 68899999999985444 4444556666666654
No 375
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=32.97 E-value=1e+02 Score=19.97 Aligned_cols=52 Identities=10% Similarity=-0.145 Sum_probs=35.5
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEe
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYN 196 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~ 196 (215)
+..-+++.+++.+++.+.+++.|..+....+ ..| .. ..++.|++|.++....
T Consensus 72 ~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~~-------~~g--------~~--~~~~~DPdG~~iel~~ 123 (126)
T 2qqz_A 72 KRAHPAFYVLKIDEFKQELIKQGIEVIDDHA-------RPD--------VI--RFYVSDPFGNRIEFME 123 (126)
T ss_dssp SSSCEEEEETTHHHHHHHHHHTTCCCEEECS-------STT--------EE--EEEEECTTSCEEEEEE
T ss_pred CceEEEEEcCCHHHHHHHHHHcCCCccCCCC-------CCC--------ee--EEEEECCCCCEEEEEe
Confidence 4666777778888888888888877543221 011 22 6889999999987654
No 376
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=32.89 E-value=1.2e+02 Score=20.99 Aligned_cols=56 Identities=16% Similarity=0.236 Sum_probs=37.1
Q ss_pred HHcCcEEEEEeCC--C---HHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcC
Q 028030 125 KKAGAEVIGISGD--D---SSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDK 187 (215)
Q Consensus 125 ~~~~v~vv~vs~d--~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~ 187 (215)
+.....+|-|..| . ...+..+++++++++..+ +...++....|... +.-.+.+.|+
T Consensus 45 ~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v-~sk~eLG~a~G~~~------~~s~vaI~d~ 105 (134)
T 2ale_A 45 NRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFV-PSRVALGRACGVSR------PVIAASITTN 105 (134)
T ss_dssp HHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEE-SCHHHHHHHTTCSS------CCSEEEEECC
T ss_pred HhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEE-CCHHHHHHHhCCCC------CeEEEEEEcC
Confidence 3344677777655 2 235778889999998776 56678888888863 2224556663
No 377
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=32.70 E-value=1.2e+02 Score=23.00 Aligned_cols=36 Identities=11% Similarity=0.229 Sum_probs=23.3
Q ss_pred CCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEE
Q 028030 94 GKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGI 134 (215)
Q Consensus 94 gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v 134 (215)
.++++|-|| ..| |....+.+.+++..++++ +.+..+
T Consensus 24 ~~v~vvgff-~~~---~~~~~~~f~~~A~~lr~~-~~F~~~ 59 (252)
T 2h8l_A 24 KDASIVGFF-DDS---FSEAHSEFLKAASNLRDN-YRFAHT 59 (252)
T ss_dssp SSCEEEEEE-SCT---TSHHHHHHHHHHHHTTTT-SCEEEE
T ss_pred CCeEEEEEE-CCC---CChHHHHHHHHHHhcccC-cEEEEE
Confidence 357788888 666 445667788888777654 444333
No 378
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=31.44 E-value=3.6 Score=21.79 Aligned_cols=20 Identities=15% Similarity=0.486 Sum_probs=15.7
Q ss_pred ChhhHHHHHHHHHHHHHHHH
Q 028030 107 TPGCTKQACAFRDSYEKFKK 126 (215)
Q Consensus 107 C~~C~~~~~~l~~l~~~~~~ 126 (215)
||.|.+.+..-.+|...|.+
T Consensus 8 CP~C~~~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYEA 27 (34)
T ss_dssp CTTTCCEESSHHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHHh
Confidence 99998888877777777764
No 379
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=31.29 E-value=1.8e+02 Score=22.28 Aligned_cols=31 Identities=13% Similarity=0.263 Sum_probs=24.5
Q ss_pred HHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 122 EKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 122 ~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
+++.++|+.|+-++.-....+..+++..+++
T Consensus 32 ~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 32 AAARARGVNVVLTTGRPYAGVHNYLKELHME 62 (282)
T ss_dssp HHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 4445679999999988887788888888775
No 380
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=31.21 E-value=2.2e+02 Score=24.49 Aligned_cols=44 Identities=7% Similarity=-0.025 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEE
Q 028030 112 KQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLL 156 (215)
Q Consensus 112 ~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 156 (215)
=.+..|.+|.+++++.|..++.+..+..+. .++++++++.-.+.
T Consensus 92 FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~V~~ 135 (506)
T 3umv_A 92 FLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGASTLVA 135 (506)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCEEEe
Confidence 445678899999999999999888887777 99999998885443
No 381
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=31.18 E-value=1.2e+02 Score=20.24 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=34.1
Q ss_pred CcEEEEEeCC--CHHHHHHHHHHcCCCeEE-EEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGD--DSSSHKAFAKKYRLPYTL-LSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d--~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++.-+++.++ +-+.+.+.+++.|+.+.. ..+. .. ....++.|++|.++.....
T Consensus 96 ~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~----------~~-------g~~~~~~DPdG~~iel~~~ 151 (156)
T 3kol_A 96 RAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTR----------PT-------GRGVYFYDPDGFMIEIRCD 151 (156)
T ss_dssp SCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-----------C-------CEEEEEECTTSCEEEEEEC
T ss_pred ceEEEEEEecHHHHHHHHHHHHHCCCccccCceec----------CC-------ccEEEEECCCCCEEEEEec
Confidence 5666676665 667777777777777532 1111 00 1268899999999887654
No 382
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=30.78 E-value=1.8e+02 Score=24.69 Aligned_cols=48 Identities=13% Similarity=0.149 Sum_probs=32.7
Q ss_pred cCcEEEEEeCC-------------CHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEE
Q 028030 127 AGAEVIGISGD-------------DSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQ 192 (215)
Q Consensus 127 ~~v~vv~vs~d-------------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~ 192 (215)
-|++++.+..+ .++.++++.++.+.++-+..|++.+ +..++|.+|+++
T Consensus 217 lG~~v~~l~~~pDg~f~n~~~~~~~~~~l~~~v~~~~adlgia~DgDaD------------------R~~~vd~~G~~l 277 (469)
T 3pdk_A 217 LEADISTMGTSPNGMNINDGVGSTHPEVLAELVKEKGADIGLAFDGDGD------------------RLIAVDEKGNIV 277 (469)
T ss_dssp TTCEEEEESCCCCSSCTTSSCSTTSTHHHHHHHHHHTCSEEEEECTTSS------------------BEEEEETTSCEE
T ss_pred cCCEEEEECCCcCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEECCCCC------------------eEEEECCCCcEE
Confidence 36777777531 2467788888888888888876632 456677777653
No 383
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=30.76 E-value=43 Score=23.23 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=22.4
Q ss_pred CCCCCccEEEEEcCCCcEEEEEeCCCCCCccHHHHH
Q 028030 174 FGSLPGRQTYILDKNGVVQLIYNNQFQPEKHIDETL 209 (215)
Q Consensus 174 ~g~~p~~~~~lid~~G~v~~~~~g~~~~~~~~~~il 209 (215)
.|..| ..+++|.+|+++....=.-.....+++.|
T Consensus 59 ~Ga~P--~LvLlD~~Ge~~E~I~IekW~tD~I~efL 92 (126)
T 2a4h_A 59 RGLDP--VVKLLDASGKVQETLSITKWNTDTVEEFF 92 (126)
T ss_dssp SSCCC--EEEECCSSSCCSEEEECSSSSCSHHHHHH
T ss_pred cCCCC--EEEEecCCCCEeeEeccccCCHHHHHHHH
Confidence 34567 89999999998877654333334454444
No 384
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=30.70 E-value=1.3e+02 Score=20.48 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=39.2
Q ss_pred HHHcCcEEEEEeCCC--H---HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCC
Q 028030 124 FKKAGAEVIGISGDD--S---SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNG 189 (215)
Q Consensus 124 ~~~~~v~vv~vs~d~--~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G 189 (215)
.+.....+|-+..|- . ..+..++++++++|..+ ....++....|... +.-.+.++|+++
T Consensus 43 i~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v-~sk~eLG~a~Gk~~------~vs~vaI~d~~~ 106 (122)
T 3o85_A 43 VNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFI-GSKNALGRACNVSV------PTIVASIGKHDA 106 (122)
T ss_dssp HHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEE-SCHHHHHHHTTCSS------CCSEEEECCCTT
T ss_pred HHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEE-CCHHHHHHHhCCCC------CEEEEEEEcccc
Confidence 333345666666542 2 45677888999996554 45678999999973 333678888765
No 385
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=30.42 E-value=41 Score=22.66 Aligned_cols=31 Identities=10% Similarity=0.308 Sum_probs=25.2
Q ss_pred cEEEEEeCCCHHHHHHHHHHcCCCeEEEEcC
Q 028030 129 AEVIGISGDDSSSHKAFAKKYRLPYTLLSDE 159 (215)
Q Consensus 129 v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~ 159 (215)
..=|-+..++.|+...|+++.|++|.+....
T Consensus 51 ~~qv~L~F~skE~AiayAek~G~~y~V~ep~ 81 (106)
T 2jya_A 51 KQQVKLTFETQEQAEAYAQRKGIEYRVILPK 81 (106)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTCEEEECCCT
T ss_pred cccceEecCCHHHHHHHHHHcCCEEEEeCCC
Confidence 3445678899999999999999999887543
No 386
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=30.19 E-value=1.3e+02 Score=25.17 Aligned_cols=45 Identities=11% Similarity=0.048 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEE
Q 028030 112 KQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLL 156 (215)
Q Consensus 112 ~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 156 (215)
=.+..|+++.+++++.|..++.+..+..+.+.++++++++.-.+.
T Consensus 49 fl~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~~~~~~~~v~~ 93 (420)
T 2j07_A 49 WFLENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKAKAVYA 93 (420)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEE
Confidence 356788999999999999999888888888999999999875444
No 387
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=29.32 E-value=46 Score=21.76 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=19.9
Q ss_pred EEEEEcCCCcEEEEEeCCC-CCCccHHHHHHHHh
Q 028030 181 QTYILDKNGVVQLIYNNQF-QPEKHIDETLKFLQ 213 (215)
Q Consensus 181 ~~~lid~~G~v~~~~~g~~-~~~~~~~~il~~l~ 213 (215)
-.|.||++|+|.....-.. .....-++++++++
T Consensus 44 v~f~I~~~G~v~~~~v~~ssg~~~ld~aAl~av~ 77 (106)
T 2k9k_A 44 LSFTIDTTGKAVDINVVDANPKRMFEREAMQALK 77 (106)
T ss_dssp EEEEEETTTEEEEEEEEEESSSSSSHHHHHHHHH
T ss_pred EEEEECCCCcEEEEEEEEcCCcHHHHHHHHHHHH
Confidence 6799999999987643211 11223355666655
No 388
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=29.19 E-value=1.3e+02 Score=25.56 Aligned_cols=45 Identities=11% Similarity=0.100 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEE
Q 028030 112 KQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLL 156 (215)
Q Consensus 112 ~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 156 (215)
=.+..|+++.+++++.|..++.+..+..+.+.++++++++.-.+.
T Consensus 89 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~ 133 (482)
T 2xry_A 89 FMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGTLVT 133 (482)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCEEEE
Confidence 346788999999999999999888877788899999988874433
No 389
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=29.10 E-value=84 Score=19.17 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=22.4
Q ss_pred EEEeCCCHHHHHHHHHHcCCCeEEEEc
Q 028030 132 IGISGDDSSSHKAFAKKYRLPYTLLSD 158 (215)
Q Consensus 132 v~vs~d~~~~~~~~~~~~~~~~~~~~d 158 (215)
|.|+.+..+..+++++..+++|.++.+
T Consensus 51 I~V~p~~~~~f~~~L~~~~I~y~Vlie 77 (78)
T 2gjf_A 51 ILIPSDMVEWFLEMLKAKGIPFTVYVE 77 (78)
T ss_dssp EEECTTSHHHHHHHHHHHTCCEEEEEE
T ss_pred EEECHHHHHHHHHHHHHCCCcEEEEeC
Confidence 456777788999999999999988764
No 390
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=28.98 E-value=47 Score=20.98 Aligned_cols=46 Identities=7% Similarity=0.056 Sum_probs=25.4
Q ss_pred HHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC-CCccHHHHHHHHhc
Q 028030 163 VRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ-PEKHIDETLKFLQS 214 (215)
Q Consensus 163 ~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~-~~~~~~~il~~l~~ 214 (215)
.+...|+.+. +- -.|.||++|+|.....-... ....-+++++++++
T Consensus 17 ~a~~~~~~G~----V~--v~~~i~~~G~v~~~~v~~ssg~~~ld~aa~~av~~ 63 (90)
T 1u07_A 17 RAQALRIEGQ----VK--VKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRR 63 (90)
T ss_dssp HHHHHTCCEE----EE--EEEEECTTSCEEEEEEEEEESSSSSHHHHHHHHTT
T ss_pred HHHHCCCceE----EE--EEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHh
Confidence 3445566542 33 67899999999876432111 11223455666653
No 391
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=28.70 E-value=55 Score=24.47 Aligned_cols=34 Identities=3% Similarity=-0.170 Sum_probs=24.7
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEe
Q 028030 99 VYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGIS 135 (215)
Q Consensus 99 l~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs 135 (215)
|+||.-.-||.|-.-.+.|.++.+++ +++|....
T Consensus 8 I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~p 41 (226)
T 1r4w_A 8 LELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLRP 41 (226)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEEE
T ss_pred EEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 44453788999999999998876654 46666554
No 392
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=28.54 E-value=91 Score=22.13 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHcCcEEEEEeCC---------------CHHHHHHHHHHcCCCeEEE
Q 028030 113 QACAFRDSYEKFKKAGAEVIGISGD---------------DSSSHKAFAKKYRLPYTLL 156 (215)
Q Consensus 113 ~~~~l~~l~~~~~~~~v~vv~vs~d---------------~~~~~~~~~~~~~~~~~~~ 156 (215)
.+|.+.++.++++++|+.+.-+|.. ..+.+...++..++.|..+
T Consensus 43 ~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v 101 (176)
T 2fpr_A 43 FEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEV 101 (176)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEE
Confidence 3456666667777788999888865 3566788888989886543
No 393
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=28.53 E-value=72 Score=22.72 Aligned_cols=39 Identities=8% Similarity=0.078 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHcCcEEEEEeCCC-HHHHHHHHHHcCCC
Q 028030 114 ACAFRDSYEKFKKAGAEVIGISGDD-SSSHKAFAKKYRLP 152 (215)
Q Consensus 114 ~~~l~~l~~~~~~~~v~vv~vs~d~-~~~~~~~~~~~~~~ 152 (215)
.|.+.++.++++++|+.++.+|... .+.++.+++..++.
T Consensus 70 ~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred chhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 4555666666777799999999887 68888899998886
No 394
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=28.50 E-value=89 Score=22.38 Aligned_cols=14 Identities=14% Similarity=0.257 Sum_probs=8.3
Q ss_pred CHHHHHHHHHHcCC
Q 028030 138 DSSSHKAFAKKYRL 151 (215)
Q Consensus 138 ~~~~~~~~~~~~~~ 151 (215)
+.+++++|+++.++
T Consensus 157 ~~~~i~~Wl~~~~~ 170 (171)
T 4ici_A 157 DEKAIRAWLDVIAV 170 (171)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCC
Confidence 45566666666553
No 395
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=28.01 E-value=1.3e+02 Score=19.56 Aligned_cols=49 Identities=10% Similarity=0.223 Sum_probs=31.5
Q ss_pred HHHHHcCcEEEEEeCCCH----HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCc
Q 028030 122 EKFKKAGAEVIGISGDDS----SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPA 171 (215)
Q Consensus 122 ~~~~~~~v~vv~vs~d~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~ 171 (215)
+..+.....+|-+..|-+ ..+..+++.+++++..+ ....++..+.|...
T Consensus 28 kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~-~s~~eLG~a~Gk~~ 80 (101)
T 3on1_A 28 KAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVV-GNRQMLGRAIGKHE 80 (101)
T ss_dssp HHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE-SCHHHHHHHTTSSC
T ss_pred HHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe-CCHHHHHHHhCCcC
Confidence 334433466777766633 34556677888887754 56678888888863
No 396
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=27.94 E-value=1.2e+02 Score=23.33 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=28.1
Q ss_pred HHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEEE
Q 028030 121 YEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLS 157 (215)
Q Consensus 121 ~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 157 (215)
.++++++|+.++.++.-....+..+++.++++.+++.
T Consensus 30 l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~ 66 (288)
T 1nrw_A 30 LRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVIS 66 (288)
T ss_dssp HHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEE
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEE
Confidence 3445667999988888888888888888888766443
No 397
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=27.93 E-value=1.5e+02 Score=20.85 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=26.9
Q ss_pred HHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCe
Q 028030 120 SYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPY 153 (215)
Q Consensus 120 l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~ 153 (215)
..++++++|+.++-+|.+....++..++.+++..
T Consensus 43 ~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~ 76 (180)
T 1k1e_A 43 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL 76 (180)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce
Confidence 4455566799999999888888888888888874
No 398
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=27.79 E-value=1.3e+02 Score=19.78 Aligned_cols=56 Identities=18% Similarity=0.126 Sum_probs=33.5
Q ss_pred CcEEEEEeCCCH---HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCC
Q 028030 128 GAEVIGISGDDS---SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQ 198 (215)
Q Consensus 128 ~v~vv~vs~d~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~ 198 (215)
+..-+++.+++. +.+.+.+++.|..+..-.... .+| . +..++.|++|.++......
T Consensus 71 ~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~-----~~g--------~--~~~~~~DPdG~~iel~~~~ 129 (138)
T 2a4x_A 71 HRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNA-----VWG--------Q--RYAIVKDPDGNVVDLFAPL 129 (138)
T ss_dssp CSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEE-----TTT--------E--EEEEEECTTCCEEEEEEEC
T ss_pred CeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCccc-----CCC--------c--EEEEEECCCCCEEEEEeCC
Confidence 567788888844 445555566676643211000 111 1 2688999999999876543
No 399
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=27.70 E-value=95 Score=21.78 Aligned_cols=39 Identities=15% Similarity=0.013 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 114 ACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 114 ~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
.+.+.++.+.++++|+.+..++..+.+.++..++.+++.
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 91 FPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 345566667777788999999888888888888888864
No 400
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=26.86 E-value=81 Score=24.00 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=29.4
Q ss_pred EEEEEcCCCChhhHHHHHHHHHHHHHHHH-cCcEEEEEeC
Q 028030 98 VVYFYPADETPGCTKQACAFRDSYEKFKK-AGAEVIGISG 136 (215)
Q Consensus 98 ll~f~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~ 136 (215)
-|.||.-.-||.|---.+.|.++.+++.+ .+++|...+.
T Consensus 4 ~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~ 43 (239)
T 3gl5_A 4 RVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSF 43 (239)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEEC
T ss_pred EEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEe
Confidence 46666477799999999999998887753 3677776653
No 401
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=26.58 E-value=1.3e+02 Score=22.28 Aligned_cols=39 Identities=8% Similarity=0.110 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEE
Q 028030 118 RDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLL 156 (215)
Q Consensus 118 ~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 156 (215)
.+..+++.++|+.|+.++......+..+.+..+++.+++
T Consensus 26 ~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i 64 (231)
T 1wr8_A 26 LEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVV 64 (231)
T ss_dssp HHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEE
Confidence 333445566799999999888888888888888764433
No 402
>2gx5_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, GAF domain; HET: PG4 P6G PCG PGE; 1.74A {Bacillus subtilis} PDB: 2b18_A 2hgv_A*
Probab=26.58 E-value=82 Score=23.02 Aligned_cols=17 Identities=12% Similarity=0.251 Sum_probs=14.2
Q ss_pred EEEEEcCCCcEEEEEeC
Q 028030 181 QTYILDKNGVVQLIYNN 197 (215)
Q Consensus 181 ~~~lid~~G~v~~~~~g 197 (215)
.+|+++++|+|......
T Consensus 48 NvyIvs~~GkiLG~~~~ 64 (170)
T 2gx5_A 48 NIFVVSRRGKLLGYSIN 64 (170)
T ss_dssp EEEEEETTSBEEEEECS
T ss_pred CEEEEcCCCCEEEEecc
Confidence 58999999999877544
No 403
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=26.38 E-value=46 Score=20.48 Aligned_cols=32 Identities=25% Similarity=0.316 Sum_probs=23.3
Q ss_pred EEEeCCCHHHHHHHHHHcCCCeEEEEcCChhH
Q 028030 132 IGISGDDSSSHKAFAKKYRLPYTLLSDEGNKV 163 (215)
Q Consensus 132 v~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~ 163 (215)
|.|+.+.....+++++.++++|.++.++-+++
T Consensus 43 i~V~p~~~~~f~~~L~~~~i~~~v~i~dvq~~ 74 (79)
T 1vjq_A 43 ILIPSDMVEWFLEMLKAKGIPFTVYVEEGGSE 74 (79)
T ss_dssp EEECGGGHHHHHHHHHHTTCCEEEEEEEEEC-
T ss_pred EEECHHHHHHHHHHHHHCCCcEEEEehhHHHH
Confidence 34555666788999999999999887654443
No 404
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=26.12 E-value=1.5e+02 Score=23.14 Aligned_cols=31 Identities=10% Similarity=0.043 Sum_probs=23.4
Q ss_pred HHHHHcCcEEEEEeCCCHHHHHHHH--HHcC-CC
Q 028030 122 EKFKKAGAEVIGISGDDSSSHKAFA--KKYR-LP 152 (215)
Q Consensus 122 ~~~~~~~v~vv~vs~d~~~~~~~~~--~~~~-~~ 152 (215)
+++.++|+.|+..+.-....+..++ +..+ +.
T Consensus 55 ~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 55 KEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN 88 (301)
T ss_dssp HHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence 3445568999999988888888888 7766 54
No 405
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=25.64 E-value=1e+02 Score=21.65 Aligned_cols=37 Identities=11% Similarity=0.095 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 116 AFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 116 ~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
.+.++.+.++++|+.+..++....+.++..++..++.
T Consensus 88 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~ 124 (216)
T 2pib_A 88 GVREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChH
Confidence 3445556667778888888888887788888887765
No 406
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=25.05 E-value=65 Score=23.43 Aligned_cols=38 Identities=24% Similarity=0.311 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 115 CAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 115 ~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
|...++.+.++++|+.+.-+|......++..++.+++.
T Consensus 89 ~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 44556666777778888888877777778888888875
No 407
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=24.85 E-value=1e+02 Score=22.87 Aligned_cols=65 Identities=18% Similarity=0.210 Sum_probs=38.0
Q ss_pred CCCHHHHHHHHHHcCCC---eE-EEE---c--------CChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 136 GDDSSSHKAFAKKYRLP---YT-LLS---D--------EGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 136 ~d~~~~~~~~~~~~~~~---~~-~~~---d--------~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
..+.+.+.+++++.|++ .. ++. + .+.+.+..+|+.+ +| +|+||.+|+ -..+.|.
T Consensus 132 i~~~~~L~~~a~~~Gl~~~d~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~G-----~P---tfvv~~~g~-~~~~~G~-- 200 (226)
T 1r4w_A 132 ITESQNILSAAEKAGMATAQAQHLLNKISTELVKSKLRETTGAACKYGAFG-----LP---TTVAHVDGK-TYMLFGS-- 200 (226)
T ss_dssp CSSHHHHHHHHHHTTCCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHTTCCS-----SC---EEEEEETTE-EEEEEST--
T ss_pred CCCHHHHHHHHHHcCCCchhHHHHHHHcCCHHHHHHHHHHHHHHHHCCCCC-----CC---EEEEeCCCC-cCceeCC--
Confidence 45778888898888884 21 111 1 1223466788887 99 667887765 2234453
Q ss_pred CCccHHHHHHHHh
Q 028030 201 PEKHIDETLKFLQ 213 (215)
Q Consensus 201 ~~~~~~~il~~l~ 213 (215)
..++.+.+.|.
T Consensus 201 --~~~~~l~~~l~ 211 (226)
T 1r4w_A 201 --DRMELLAYLLG 211 (226)
T ss_dssp --TCHHHHHHHHT
T ss_pred --CcHHHHHHHhc
Confidence 22444555443
No 408
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=24.84 E-value=1.6e+02 Score=19.86 Aligned_cols=43 Identities=16% Similarity=0.340 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCcEEEEEeCCCHHHHHHHH---HHcCCCeEEEEcCC
Q 028030 118 RDSYEKFKKAGAEVIGISGDDSSSHKAFA---KKYRLPYTLLSDEG 160 (215)
Q Consensus 118 ~~l~~~~~~~~v~vv~vs~d~~~~~~~~~---~~~~~~~~~~~d~~ 160 (215)
.+..+.+...|...|.+-.++++++.+.. +..|+++.++.|.+
T Consensus 43 ~~~~~~W~~~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG 88 (120)
T 1xty_A 43 KEWLNEWLHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAG 88 (120)
T ss_dssp HHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred HHHHHHHHHCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 44556666678888888888776655544 45688888888864
No 409
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=24.74 E-value=1e+02 Score=21.21 Aligned_cols=54 Identities=22% Similarity=0.358 Sum_probs=31.0
Q ss_pred CcEEEEEeCCCH---HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGDDS---SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
|+.-+++.+++. +++.+.+++.|+.+..-.+ + .. | ....++.|++|.++....+
T Consensus 76 g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~--------~--~~---g---~~~~~~~DPdG~~iel~~~ 132 (160)
T 3r4q_A 76 GQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR--------W--PN---G---SYSVYIRDPAGNSVEVGEG 132 (160)
T ss_dssp EECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEE--------C--TT---S---CEEEEEECTTCCEEEEEEG
T ss_pred ceeEEEEEeCCHHHHHHHHHHHHHCCCEEecccc--------c--cC---C---cEEEEEECCCCCEEEEEeC
Confidence 456677777443 4444555556665431111 0 00 1 2278999999999988665
No 410
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=24.62 E-value=1.6e+02 Score=25.11 Aligned_cols=44 Identities=11% Similarity=0.268 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEEE
Q 028030 113 QACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLL 156 (215)
Q Consensus 113 ~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~ 156 (215)
.+..|+++.+++++.|..++.+..+..+.+.++++++++.-.+.
T Consensus 55 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~v~~ 98 (484)
T 1owl_A 55 LQGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYW 98 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEE
Confidence 56788999999999999998888777788888888888874443
No 411
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=24.24 E-value=1.2e+02 Score=21.60 Aligned_cols=37 Identities=5% Similarity=-0.017 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 116 AFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 116 ~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
.+.++.+.++++|+.+..++....+.++..++..++.
T Consensus 74 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 110 (205)
T 3m9l_A 74 GAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLA 110 (205)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred cHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCch
Confidence 3445556667778888888888777788888887764
No 412
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=24.16 E-value=2.4e+02 Score=23.65 Aligned_cols=22 Identities=18% Similarity=0.086 Sum_probs=16.5
Q ss_pred HHHHHHHHHHcCCCeEEEEcCC
Q 028030 139 SSSHKAFAKKYRLPYTLLSDEG 160 (215)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~d~~ 160 (215)
++.+++..++.+.++-+..|++
T Consensus 220 ~~~l~~~v~~~~adlgia~DgD 241 (443)
T 3i3w_A 220 VSNIKKAVKEQKADLGISLDGD 241 (443)
T ss_dssp HHHHHHHHHHHTCSEEEEECTT
T ss_pred HHHHHHHHHhcCCcEEEEECCC
Confidence 4667777788888887777766
No 413
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=24.09 E-value=2.4e+02 Score=21.52 Aligned_cols=69 Identities=13% Similarity=0.066 Sum_probs=41.5
Q ss_pred CcEEEEEeCCC---H----HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeCCCC
Q 028030 128 GAEVIGISGDD---S----SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNNQFQ 200 (215)
Q Consensus 128 ~v~vv~vs~d~---~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g~~~ 200 (215)
+.-+||+..++ . +..++-+++++.++.+..|-.. ||-. .. .++||+++| . . ... .
T Consensus 154 ~~~lVGFaaEt~~~~~~l~~~A~~kL~~k~~D~IvaN~v~~-----f~~~------~n--~v~li~~~~-~-~-~~~--s 215 (232)
T 2gk4_A 154 TIHLIGFKLLVDVTEDHLVDIARKSLIKNQADLIIANDLTQ-----ISAD------QH--RAIFVEKNQ-L-Q-TVQ--T 215 (232)
T ss_dssp TSEEEEEEEESSCCHHHHHHHHHHHHHHHTCSEEEEEEGGG-----BCSS------CB--CEEEECSSC-E-E-EES--S
T ss_pred CcEEEEEEeccCCchhHHHHHHHHHHHHhCCCEEEEecccc-----cCcC------ce--EEEEEECCC-c-c-cCC--C
Confidence 45788886432 1 3445556688999999887542 5544 23 689999999 2 1 111 2
Q ss_pred CCccHHHHHHHHhc
Q 028030 201 PEKHIDETLKFLQS 214 (215)
Q Consensus 201 ~~~~~~~il~~l~~ 214 (215)
-.+....|++.+.+
T Consensus 216 K~eiA~~I~~~i~~ 229 (232)
T 2gk4_A 216 KEEIAELLLEKIQA 229 (232)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 23445556666543
No 414
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=23.75 E-value=45 Score=24.35 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=17.9
Q ss_pred EEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 100 YFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 100 ~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
..|.+..||.|++..-.|.+ ++-.++++-|..
T Consensus 5 ~LY~~~~sP~~~rvr~~L~e-----~gi~~e~~~v~~ 36 (210)
T 4hoj_A 5 TLYSGITCPFSHRCRFVLYE-----KGMDFEIKDIDI 36 (210)
T ss_dssp EEEECTTCHHHHHHHHHHHH-----HTCCCEEEECCT
T ss_pred EEecCCCChHHHHHHHHHHH-----cCCCCEEEEeCC
Confidence 34447789999876544433 222355555544
No 415
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=23.69 E-value=1.4e+02 Score=22.70 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=26.3
Q ss_pred HHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEE
Q 028030 119 DSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTL 155 (215)
Q Consensus 119 ~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~ 155 (215)
++.++.++.|+.+..-++|+++.+++|+.+.|+...+
T Consensus 185 ~~v~~~~~~G~~v~~wTvn~~~~~~~~l~~~GvdgIi 221 (248)
T 1zcc_A 185 GIIEASRKAGLEIMVYYGGDDMAVHREIATSDVDYIN 221 (248)
T ss_dssp HHHHHHHHHTCEEEEECCCCCHHHHHHHHHSSCSEEE
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCEEE
Confidence 4455566668888877888888888767777777543
No 416
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=23.59 E-value=62 Score=21.82 Aligned_cols=27 Identities=26% Similarity=0.311 Sum_probs=23.0
Q ss_pred EEeCCCHHHHHHHHHHcCCCeEEEEcC
Q 028030 133 GISGDDSSSHKAFAKKYRLPYTLLSDE 159 (215)
Q Consensus 133 ~vs~d~~~~~~~~~~~~~~~~~~~~d~ 159 (215)
-+..++.|+...|++++|++|.+....
T Consensus 63 ~L~F~skE~AiayAek~G~~y~V~ep~ 89 (108)
T 2lju_A 63 CLSFTTRELAIAYAVAHKIDYTVLQDN 89 (108)
T ss_dssp CEEESSHHHHHHHHHHTTCEEEEECSS
T ss_pred eEecCCHHHHHHHHHHcCCEEEEecCC
Confidence 467789999999999999999987543
No 417
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=23.20 E-value=3.5e+02 Score=23.09 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=23.5
Q ss_pred cCCCCCCCCCeEEeCCCCCeeecCCc-CCCcEEEEEE
Q 028030 67 KVSKGQAPPSFTLKDQEGRNVSLSKF-KGKPVVVYFY 102 (215)
Q Consensus 67 ~~~~g~~~P~f~l~~~~g~~~~l~~~-~gk~~ll~f~ 102 (215)
...+|..+|++.+. +| .++.|+ .++++||.|-
T Consensus 449 ~~~~G~r~p~~~l~--~g--~~l~d~~~~~~~ll~~~ 481 (549)
T 2r0c_A 449 SARPGARAPHAWLT--PT--TSTLDLFGRGFVLLSFG 481 (549)
T ss_dssp CCCTTSBCCCCBSS--SS--CBGGGGCSSSEEEEEES
T ss_pred CCCCCCcCCCcEeC--CC--cCHHHHcCCceEEEEcC
Confidence 45789999999886 56 466665 4478888874
No 418
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=23.08 E-value=61 Score=27.69 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=26.3
Q ss_pred CCCCCCCCCeEEeCCCCCeeecCCc--CCCcEEEEEE
Q 028030 68 VSKGQAPPSFTLKDQEGRNVSLSKF--KGKPVVVYFY 102 (215)
Q Consensus 68 ~~~g~~~P~f~l~~~~g~~~~l~~~--~gk~~ll~f~ 102 (215)
..+|..+|++.+...+| ...+.|+ .|+++||.|-
T Consensus 395 ~~~G~r~p~~~l~~~~~-~~~l~d~~~~~~~~ll~~~ 430 (499)
T 2qa2_A 395 PLLGMRMPHQELVRAHG-KTSTTELLHPARGVLLDIA 430 (499)
T ss_dssp TTTTSBCCCCEEECSSS-EEETTGGGTTCSEEEEECS
T ss_pred CCCCCCCCCCeeecCCC-ceeHHHHhcCCeEEEEEec
Confidence 35799999999987666 5677776 4689999883
No 419
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=22.96 E-value=1.1e+02 Score=21.72 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCcEEEEEeCCCH---HHHHHHHHHcCCC
Q 028030 114 ACAFRDSYEKFKKAGAEVIGISGDDS---SSHKAFAKKYRLP 152 (215)
Q Consensus 114 ~~~l~~l~~~~~~~~v~vv~vs~d~~---~~~~~~~~~~~~~ 152 (215)
+|.+.++.++++++|+.+..+|.... +.+...++..++.
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 34455555566666777777775443 6677777777764
No 420
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=22.85 E-value=1.1e+02 Score=19.98 Aligned_cols=56 Identities=4% Similarity=-0.094 Sum_probs=34.9
Q ss_pred cCcEEEEEeCCCHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEE
Q 028030 127 AGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIY 195 (215)
Q Consensus 127 ~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~ 195 (215)
.|+.-+++.++|-+...+.+++.|+.+.. .+... .+..+ .. ..|+.|++|.++...
T Consensus 76 ~g~~hiaf~v~di~~~~~~l~~~G~~~~~--~p~~~----~~~~g-----~~--~~~~~dPdG~~iEl~ 131 (133)
T 3hdp_A 76 STPYHICYEVEDIQKSIEEMSQIGYTLFK--KAEIA----PAIDN-----RK--VAFLFSTDIGLIELL 131 (133)
T ss_dssp CEEEEEEEEESCHHHHHHHHTTTTEEEEE--EEEEE----GGGTT-----EE--EEEEEETTTEEEEEE
T ss_pred CceEEEEEEcCCHHHHHHHHHHcCCcccc--CCeec----ccCCC-----ce--EEEEECCCceEEEEe
Confidence 46778888889888887778777765432 11000 01111 22 678889999887654
No 421
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=22.73 E-value=1.7e+02 Score=19.20 Aligned_cols=51 Identities=18% Similarity=0.092 Sum_probs=29.1
Q ss_pred EEEEEeCCCHHHHHHHHHHcCCC-eEEE-EcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 130 EVIGISGDDSSSHKAFAKKYRLP-YTLL-SDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 130 ~vv~vs~d~~~~~~~~~~~~~~~-~~~~-~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
..+++.++|.++..+.+++.|.. +..- .+. .+ ..+.++.|++|.++.....
T Consensus 68 ~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~------~~-----------G~~~~~~DPdGn~iel~~~ 120 (128)
T 3g12_A 68 LQLGFQITDLEKTVQELVKIPGAMCILDPTDM------PD-----------GKKAIVLDPDGHSIELCEL 120 (128)
T ss_dssp EEEEEEESCHHHHHHHHTTSTTCEEEEEEEEC------C------------CEEEEEECTTCCEEEEEC-
T ss_pred eEEEEEeCCHHHHHHHHHHCCCceeccCceeC------CC-----------ccEEEEECCCCCEEEEEEe
Confidence 34556666666666666666666 2210 110 01 1148899999999887644
No 422
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=22.73 E-value=1.8e+02 Score=19.56 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=26.6
Q ss_pred HHHHHHHHcCcEEEEEeCCCHHHHHHHH---HHcCCCeEEEEcC
Q 028030 119 DSYEKFKKAGAEVIGISGDDSSSHKAFA---KKYRLPYTLLSDE 159 (215)
Q Consensus 119 ~l~~~~~~~~v~vv~vs~d~~~~~~~~~---~~~~~~~~~~~d~ 159 (215)
+..+.+...|...|.+-.++++++.+.. +..++++.++.|.
T Consensus 41 ~~~~~W~~~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DA 84 (117)
T 1q7s_A 41 EMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDA 84 (117)
T ss_dssp HHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHhCCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 3455666667778788777776555444 4566776666664
No 423
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=22.41 E-value=1.6e+02 Score=25.52 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCCeEE
Q 028030 112 KQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTL 155 (215)
Q Consensus 112 ~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~ 155 (215)
-.+..|+++.+++++.|..++.+..+..+.+.++++++++.-.+
T Consensus 97 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~ 140 (525)
T 2j4d_A 97 FLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVF 140 (525)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHcCCCEEE
Confidence 35678899999999999888888777777788888888776433
No 424
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=22.41 E-value=1.2e+02 Score=22.14 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHcCcEEEEEeCCC---------------HHHHHHHHHHcCCCe
Q 028030 114 ACAFRDSYEKFKKAGAEVIGISGDD---------------SSSHKAFAKKYRLPY 153 (215)
Q Consensus 114 ~~~l~~l~~~~~~~~v~vv~vs~d~---------------~~~~~~~~~~~~~~~ 153 (215)
+|...++.++++++|+.++.+|... .+.+...++..++.|
T Consensus 52 ~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f 106 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL 106 (211)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce
Confidence 4556666677778899999998877 367788888888764
No 425
>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}
Probab=22.04 E-value=1.9e+02 Score=19.55 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=32.8
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeEEE-EcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYTLL-SDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++ .+++.+++.+++.+.+++.|..+..- .+.. .+| +..++.|++|.++.....
T Consensus 91 g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~-----~~g-----------~~~~~~DPdG~~iel~~~ 144 (148)
T 2r6u_A 91 TP-VVTVDVESIESALERIESLGGKTVTGRTPVG-----NMG-----------FAAYFTDSEGNVVGLWET 144 (148)
T ss_dssp SC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEET-----TTE-----------EEEEEECTTSCEEEEEEE
T ss_pred eE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecC-----CCE-----------EEEEEECCCCCEEEEEec
Confidence 44 56677777777777777777664321 1100 011 267889999999877643
No 426
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=22.01 E-value=1.2e+02 Score=20.28 Aligned_cols=53 Identities=13% Similarity=0.124 Sum_probs=32.8
Q ss_pred CcEEEEEeCC--CHHHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEE
Q 028030 128 GAEVIGISGD--DSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIY 195 (215)
Q Consensus 128 ~v~vv~vs~d--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~ 195 (215)
+..-+++.++ +-+++.+.+++.|+.+.-..+. .++. ....++.|++|.++..+
T Consensus 85 ~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~------~~~~---------~~~~~~~DPdG~~iel~ 139 (141)
T 3ghj_A 85 QQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQ------EWMQ---------AVSLYFADPNGHALEFT 139 (141)
T ss_dssp CCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEE------GGGT---------EEEEEEECTTCCEEEEE
T ss_pred CCceEEEEEeHHHHHHHHHHHHHCCCeEeCCccc------CCCC---------ceEEEEECCCCCEEEEE
Confidence 4455555544 7778888888888876411110 1111 22688999999988654
No 427
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=21.44 E-value=1.6e+02 Score=25.07 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 112 KQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 112 ~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
=.+..|+++.+++++.|..++.+..+..+.+.++++++++.
T Consensus 62 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~ 102 (489)
T 1np7_A 62 FLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAK 102 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCC
Confidence 35677888888888888888877665555556666655544
No 428
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=21.32 E-value=1.4e+02 Score=21.64 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=22.2
Q ss_pred HHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 117 FRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 117 l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
+.++.+.++++|+.+..++......++..++..++.
T Consensus 88 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 88 IPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 344445555566777777666666666667766653
No 429
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=21.31 E-value=1.6e+02 Score=18.55 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=31.1
Q ss_pred EEEEeCCCHHHHHHHHHHcCCCeEE-EEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEE
Q 028030 131 VIGISGDDSSSHKAFAKKYRLPYTL-LSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIY 195 (215)
Q Consensus 131 vv~vs~d~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~ 195 (215)
.+++.+++.+++.+.+++.|..+.. ..+. .+| . ...++.|++|..+..+
T Consensus 66 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~------~~g--------~--~~~~~~DPdG~~iel~ 115 (118)
T 2i7r_A 66 IIHIEVEDVDQNYKRLNELGIKVLHGPTVT------DWG--------T--ESLLVQGPAGLVLDFY 115 (118)
T ss_dssp EEEEECSCHHHHHHHHHHHTCCEEEEEEEC------TTS--------C--EEEEEECGGGCEEEEE
T ss_pred EEEEEECCHHHHHHHHHHCCCceecCCccc------cCc--------c--EEEEEECCCccEEEEE
Confidence 3677777777777777777776422 1111 012 1 2678999999988764
No 430
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=21.28 E-value=2.5e+02 Score=21.40 Aligned_cols=59 Identities=7% Similarity=0.039 Sum_probs=34.5
Q ss_pred CCCCCe-EEeCCCCCeeecCCc----CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 72 QAPPSF-TLKDQEGRNVSLSKF----KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 72 ~~~P~f-~l~~~~g~~~~l~~~----~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
-+..++ .+.+.+|..+....+ .++++||.+- +..+. +. .+..+.+.+.++|+.|+.+..
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~H-G~~~~-~~----~~~~~~~~l~~~g~~vi~~D~ 95 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSH-GAGEH-SG----RYEELARMLMGLDLLVFAHDH 95 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEEC-CTTCC-GG----GGHHHHHHHHTTTEEEEEECC
T ss_pred cccccCceEEccCCeEEEEEEeCCCCCCCcEEEEEC-CCCcc-cc----hHHHHHHHHHhCCCeEEEEcC
Confidence 344456 677888877765433 2345555554 43332 22 334455666667899999863
No 431
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=20.98 E-value=1.8e+02 Score=18.78 Aligned_cols=57 Identities=16% Similarity=0.157 Sum_probs=36.5
Q ss_pred CcEEEEEeCCCHHHHHHHHHHcCCCeE-----EEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGDDSSSHKAFAKKYRLPYT-----LLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d~~~~~~~~~~~~~~~~~-----~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
+...+++.+++.+++.+.+++.|..+. ++..+.. ..+| . +..++.|++|.++.....
T Consensus 58 ~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~---~~~g--------~--~~~~~~DPdG~~iel~~~ 119 (126)
T 1ecs_A 58 SWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPEL---QGWG--------G--TMAALVDPDGTLLRLIQN 119 (126)
T ss_dssp CCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEE---CTTS--------S--EEEEEECTTSCEEEEEEC
T ss_pred cceEEEEEECCHHHHHHHHHHCCCccccccCccccCCcc---cCcc--------c--EEEEEECCCCCEEEEecc
Confidence 455677778888888888888887741 1111110 0011 1 268899999999987654
No 432
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=20.93 E-value=1.4e+02 Score=22.04 Aligned_cols=37 Identities=8% Similarity=0.232 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 116 AFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 116 ~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
.+.++.+.++++|+.+..++....+.++..++.+++.
T Consensus 118 ~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 118 NVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 3455556667778888888887777788888888764
No 433
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=20.90 E-value=1.1e+02 Score=21.90 Aligned_cols=37 Identities=11% Similarity=0.029 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 116 AFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 116 ~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
.+.++.+.+++.|+.+..++....+.++..++..++.
T Consensus 95 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 95 GAVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp THHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 3445556667778888888888887788888877764
No 434
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=20.83 E-value=2.6e+02 Score=20.74 Aligned_cols=56 Identities=9% Similarity=0.061 Sum_probs=36.6
Q ss_pred CcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC---CCHHHHHHHHHHcCCC
Q 028030 95 KPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG---DDSSSHKAFAKKYRLP 152 (215)
Q Consensus 95 k~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~---d~~~~~~~~~~~~~~~ 152 (215)
|.++++..-+-+.. ....+.-.+..++++++|+.++.++. -....+.+++++.++.
T Consensus 7 kli~~DlDGTLl~~--~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 7 KGYLIDLDGTMYNG--TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp SEEEEECSSSTTCH--HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEEEEeCcCceEeC--CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44555555222332 44556666666778888999999866 4567777888887765
No 435
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=20.77 E-value=1.4e+02 Score=21.33 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=21.5
Q ss_pred HHHHHHHHHHcCcEEEEEeCCCHHHHHHHHHHcCCC
Q 028030 117 FRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLP 152 (215)
Q Consensus 117 l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~ 152 (215)
+.++.+.++++|+.+..++..+.+.++..++..++.
T Consensus 101 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 101 VPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 344445555566776666666666666666665543
No 436
>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8
Probab=20.54 E-value=1.6e+02 Score=19.44 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=31.9
Q ss_pred CcEEEEEeCCCH---HHHHHHHHHcCCCeEEEEcCChhHHHHhCCCccCCCCCCccEEEEEcCCCcEEEEEeC
Q 028030 128 GAEVIGISGDDS---SSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYILDKNGVVQLIYNN 197 (215)
Q Consensus 128 ~v~vv~vs~d~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~~~g~~p~~~~~lid~~G~v~~~~~g 197 (215)
++.-+++.+++. +.+.+.+++.|+.+. ..... .++. . ..|+.|++|.++.....
T Consensus 77 ~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~--~~~~~----~~~~--------~--g~~~~DPdG~~iel~~~ 133 (139)
T 1twu_A 77 PDSLLVFYVPNAVELAAITSKLKHMGYQEV--ESENP----YWSN--------G--GVTIEDPDGWRIVFMNS 133 (139)
T ss_dssp TTCEEEEECCCHHHHHHHHHHHHHTTCCEE--CCSSH----HHHS--------S--EEEEECTTCCEEEEESS
T ss_pred CccEEEEEeCCcchHHHHHHHHHHcCCcCc--CCCCc----ccCC--------C--CeEEECCCCCEEEEEEc
Confidence 456778888887 566666666676532 11110 1111 1 12689999999887653
No 437
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=20.45 E-value=2.3e+02 Score=20.67 Aligned_cols=57 Identities=7% Similarity=0.049 Sum_probs=33.0
Q ss_pred CCCe-EEeCCCCCeeecCCc----CCCcEEEEEEcCCCChhhHHHHHHHHHHHHHHHHcCcEEEEEeC
Q 028030 74 PPSF-TLKDQEGRNVSLSKF----KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 136 (215)
Q Consensus 74 ~P~f-~l~~~~g~~~~l~~~----~gk~~ll~f~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 136 (215)
..++ .+.+.+|..+....+ .++++||.+- +..+. .. .+..+.+.+.++|+.++.+..
T Consensus 16 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~h-G~~~~-~~----~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 16 YQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSH-GAGEH-SG----RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp GGGSCEEECTTSCEEEEEEECCSSCCSEEEEEEC-CTTCC-GG----GGHHHHHHHHHTTEEEEEECC
T ss_pred cCCCCeEecCCCeEEEEEEeccCCCCCeEEEEEC-CCCch-hh----HHHHHHHHHHhCCCcEEEeCC
Confidence 3344 677788877765433 2245555554 43322 22 234455566667899999874
No 438
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=20.45 E-value=62 Score=20.83 Aligned_cols=15 Identities=13% Similarity=0.151 Sum_probs=12.8
Q ss_pred EEEEEcCCCcEEEEE
Q 028030 181 QTYILDKNGVVQLIY 195 (215)
Q Consensus 181 ~~~lid~~G~v~~~~ 195 (215)
.++++|.+|+|++..
T Consensus 17 gviv~D~~g~I~~~N 31 (121)
T 4hi4_A 17 NVMIADNDLNIIYMN 31 (121)
T ss_dssp EEEEEETTCBEEEEC
T ss_pred cEEEEcCCCeEEEec
Confidence 589999999998763
No 439
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=20.27 E-value=1.3e+02 Score=22.32 Aligned_cols=66 Identities=9% Similarity=0.112 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHcCcEEEEEeCC------CHHHHHHHHHH-cCCCeEEEEcCC-hhHHHHhCCCccCCCCCCccEEEEEcC
Q 028030 116 AFRDSYEKFKKAGAEVIGISGD------DSSSHKAFAKK-YRLPYTLLSDEG-NKVRKEWGVPADFFGSLPGRQTYILDK 187 (215)
Q Consensus 116 ~l~~l~~~~~~~~v~vv~vs~d------~~~~~~~~~~~-~~~~~~~~~d~~-~~~~~~~g~~~~~~g~~p~~~~~lid~ 187 (215)
.|.++.++.++.| ..+.|..| ..+..-+|+.+ ++..+.+-.... -..++..|+.. ++ +.|++|.
T Consensus 42 ~l~~~v~~lk~~~-K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~~gL~t-----Iq--R~FliDS 113 (192)
T 3kts_A 42 QLKALVKYAQAGG-KKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLA-----IQ--RLFMIDS 113 (192)
T ss_dssp THHHHHHHHHHTT-CEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTCEE-----EE--EEECCSH
T ss_pred HHHHHHHHHHHcC-CeEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHHCCCeE-----EE--EEEEEEc
Confidence 3455555666654 34444443 34555667765 455555544322 34677888876 77 8999985
Q ss_pred CC
Q 028030 188 NG 189 (215)
Q Consensus 188 ~G 189 (215)
..
T Consensus 114 ~a 115 (192)
T 3kts_A 114 SA 115 (192)
T ss_dssp HH
T ss_pred ch
Confidence 43
No 440
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=20.03 E-value=1.9e+02 Score=18.85 Aligned_cols=17 Identities=18% Similarity=0.133 Sum_probs=14.5
Q ss_pred EEEEEcCCCcEEEEEeC
Q 028030 181 QTYILDKNGVVQLIYNN 197 (215)
Q Consensus 181 ~~~lid~~G~v~~~~~g 197 (215)
..++.|++|.++.....
T Consensus 106 ~~~~~DPdG~~iel~~~ 122 (137)
T 3itw_A 106 QYLVRDLEGHLWEFTRH 122 (137)
T ss_dssp EEEEECSSSCEEEEEEC
T ss_pred EEEEECCCCCEEEEEEE
Confidence 78999999999987654
Done!