Query 028043
Match_columns 214
No_of_seqs 329 out of 2933
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 05:21:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028043.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028043hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4221 Short-chain alcohol de 99.9 1.3E-24 2.8E-29 175.2 12.4 129 80-208 4-146 (246)
2 COG0300 DltE Short-chain dehyd 99.9 8.2E-24 1.8E-28 174.4 12.4 132 78-209 2-150 (265)
3 KOG1205 Predicted dehydrogenas 99.9 2E-23 4.3E-28 173.4 9.7 133 78-210 8-158 (282)
4 COG1086 Predicted nucleoside-d 99.8 3.2E-21 6.9E-26 170.9 9.7 149 58-210 228-384 (588)
5 KOG1502 Flavonol reductase/cin 99.8 1.1E-20 2.3E-25 159.3 12.5 126 81-209 5-136 (327)
6 KOG1201 Hydroxysteroid 17-beta 99.8 1.2E-20 2.5E-25 156.2 11.2 131 78-208 34-179 (300)
7 PRK08339 short chain dehydroge 99.8 3.3E-20 7.1E-25 154.2 12.6 131 78-208 4-150 (263)
8 PRK05854 short chain dehydroge 99.8 4.5E-20 9.7E-25 157.3 13.0 130 78-207 10-155 (313)
9 PRK06197 short chain dehydroge 99.8 8.2E-20 1.8E-24 154.8 14.5 130 78-207 12-157 (306)
10 PRK07825 short chain dehydroge 99.8 9.3E-20 2E-24 151.8 12.5 128 79-208 2-143 (273)
11 PRK05876 short chain dehydroge 99.8 8.9E-20 1.9E-24 152.7 12.1 130 79-208 3-149 (275)
12 KOG1208 Dehydrogenases with di 99.8 1.2E-19 2.5E-24 154.2 13.0 128 78-205 31-174 (314)
13 PRK07478 short chain dehydroge 99.8 1.1E-19 2.5E-24 149.6 12.0 129 78-206 2-147 (254)
14 PRK05872 short chain dehydroge 99.8 1.6E-19 3.4E-24 152.6 12.7 131 78-208 5-149 (296)
15 PRK05866 short chain dehydroge 99.8 2E-19 4.4E-24 151.9 13.3 131 77-207 35-183 (293)
16 PRK07063 short chain dehydroge 99.8 1.6E-19 3.5E-24 149.2 12.0 130 79-208 4-151 (260)
17 COG1087 GalE UDP-glucose 4-epi 99.8 8E-20 1.7E-24 151.1 9.9 123 83-209 1-125 (329)
18 TIGR03589 PseB UDP-N-acetylglu 99.8 2.3E-19 5E-24 153.6 13.1 126 80-207 2-130 (324)
19 PRK05717 oxidoreductase; Valid 99.8 2.2E-19 4.8E-24 148.1 12.4 130 78-208 6-150 (255)
20 PRK06139 short chain dehydroge 99.8 1.6E-19 3.5E-24 155.0 12.0 130 79-208 4-149 (330)
21 PRK06194 hypothetical protein; 99.8 1.5E-19 3.3E-24 151.4 11.6 129 80-208 4-154 (287)
22 PLN02253 xanthoxin dehydrogena 99.8 2.8E-19 6E-24 149.4 12.9 130 78-207 14-160 (280)
23 PRK15181 Vi polysaccharide bio 99.8 1.3E-19 2.8E-24 156.5 11.2 128 79-208 12-147 (348)
24 PRK07109 short chain dehydroge 99.8 2.6E-19 5.6E-24 154.0 12.7 131 78-208 4-150 (334)
25 PRK06180 short chain dehydroge 99.8 3.1E-19 6.7E-24 149.2 12.8 127 81-208 3-143 (277)
26 PRK06196 oxidoreductase; Provi 99.8 2.5E-19 5.4E-24 152.6 12.5 126 79-206 23-160 (315)
27 PRK08265 short chain dehydroge 99.8 3.1E-19 6.7E-24 148.0 12.5 127 80-207 4-142 (261)
28 PLN02986 cinnamyl-alcohol dehy 99.8 3.9E-19 8.4E-24 151.6 13.2 124 80-206 3-132 (322)
29 PRK07453 protochlorophyllide o 99.8 3.5E-19 7.7E-24 152.0 12.8 127 80-206 4-149 (322)
30 PRK12823 benD 1,6-dihydroxycyc 99.8 2.9E-19 6.3E-24 147.6 11.8 134 79-213 5-155 (260)
31 PRK07024 short chain dehydroge 99.8 3.1E-19 6.8E-24 147.5 12.0 127 82-208 2-144 (257)
32 PRK07523 gluconate 5-dehydroge 99.8 3.7E-19 8E-24 146.7 12.3 130 78-207 6-151 (255)
33 PRK06179 short chain dehydroge 99.8 2.6E-19 5.5E-24 148.8 11.3 122 81-208 3-138 (270)
34 PRK06182 short chain dehydroge 99.8 3.4E-19 7.4E-24 148.5 12.0 123 81-207 2-138 (273)
35 PLN03209 translocon at the inn 99.8 8.9E-19 1.9E-23 157.9 15.4 125 78-206 76-212 (576)
36 COG3967 DltE Short-chain dehyd 99.8 2.9E-19 6.3E-24 140.3 10.6 128 79-208 2-145 (245)
37 PRK12481 2-deoxy-D-gluconate 3 99.8 3.5E-19 7.6E-24 146.9 11.7 130 78-208 4-149 (251)
38 PRK07062 short chain dehydroge 99.8 4.3E-19 9.3E-24 147.1 12.2 130 79-208 5-152 (265)
39 PLN02989 cinnamyl-alcohol dehy 99.8 4.6E-19 1E-23 151.2 12.6 125 81-207 4-134 (325)
40 PRK06079 enoyl-(acyl carrier p 99.8 2.6E-19 5.6E-24 147.9 10.4 129 78-207 3-149 (252)
41 PLN02662 cinnamyl-alcohol dehy 99.8 5.4E-19 1.2E-23 150.3 12.6 121 81-205 3-130 (322)
42 PRK08589 short chain dehydroge 99.8 5E-19 1.1E-23 147.7 12.1 128 80-208 4-147 (272)
43 PRK07890 short chain dehydroge 99.8 4.1E-19 8.8E-24 146.3 11.3 129 80-208 3-147 (258)
44 PRK08267 short chain dehydroge 99.8 7.4E-19 1.6E-23 145.2 12.2 126 82-207 1-141 (260)
45 PRK05867 short chain dehydroge 99.8 5.4E-19 1.2E-23 145.6 11.1 128 79-206 6-150 (253)
46 PRK08415 enoyl-(acyl carrier p 99.8 7E-19 1.5E-23 147.3 11.8 127 79-207 2-149 (274)
47 PRK05993 short chain dehydroge 99.8 8.1E-19 1.8E-23 146.7 12.2 124 81-208 3-141 (277)
48 TIGR03325 BphB_TodD cis-2,3-di 99.8 1.4E-18 3E-23 144.0 13.4 129 79-208 2-148 (262)
49 PF02719 Polysacc_synt_2: Poly 99.8 9.4E-20 2E-24 152.1 6.3 124 85-210 1-136 (293)
50 PRK06398 aldose dehydrogenase; 99.8 6.9E-19 1.5E-23 145.7 11.5 121 79-208 3-137 (258)
51 PLN02427 UDP-apiose/xylose syn 99.8 8.5E-19 1.8E-23 153.2 12.7 127 80-208 12-142 (386)
52 PRK06200 2,3-dihydroxy-2,3-dih 99.8 7.5E-19 1.6E-23 145.6 11.7 129 79-208 3-149 (263)
53 PRK07231 fabG 3-ketoacyl-(acyl 99.8 9.5E-19 2.1E-23 143.3 12.1 130 80-209 3-148 (251)
54 PRK06482 short chain dehydroge 99.8 1.1E-18 2.4E-23 145.5 12.5 125 82-207 2-140 (276)
55 PRK08263 short chain dehydroge 99.8 1E-18 2.2E-23 145.8 12.3 127 81-208 2-142 (275)
56 PRK08251 short chain dehydroge 99.8 1.3E-18 2.7E-23 142.7 12.6 126 82-207 2-145 (248)
57 PRK07774 short chain dehydroge 99.8 9.1E-19 2E-23 143.6 11.4 130 79-208 3-151 (250)
58 TIGR02622 CDP_4_6_dhtase CDP-g 99.8 9.6E-19 2.1E-23 150.9 12.0 127 81-208 3-133 (349)
59 PRK09186 flagellin modificatio 99.8 8.4E-19 1.8E-23 144.3 11.1 128 80-207 2-150 (256)
60 PRK06114 short chain dehydroge 99.8 1E-18 2.3E-23 144.1 11.5 130 78-207 4-150 (254)
61 PLN02650 dihydroflavonol-4-red 99.8 1.8E-18 3.9E-23 149.3 13.3 124 81-207 4-133 (351)
62 PF01073 3Beta_HSD: 3-beta hyd 99.8 4.5E-19 9.8E-24 149.0 9.3 118 86-208 1-122 (280)
63 PRK06138 short chain dehydroge 99.8 1.2E-18 2.7E-23 142.8 11.7 129 79-207 2-145 (252)
64 TIGR01472 gmd GDP-mannose 4,6- 99.8 9.2E-19 2E-23 150.6 11.3 124 83-208 1-138 (343)
65 PRK08085 gluconate 5-dehydroge 99.8 1.6E-18 3.5E-23 142.8 12.0 129 78-206 5-149 (254)
66 PRK09242 tropinone reductase; 99.8 1.5E-18 3.2E-23 143.2 11.8 131 78-208 5-153 (257)
67 PRK07856 short chain dehydroge 99.8 1.5E-18 3.2E-23 142.9 11.8 125 78-208 2-141 (252)
68 PRK09291 short chain dehydroge 99.8 1.4E-18 3.1E-23 143.0 11.7 126 82-207 2-137 (257)
69 PLN02653 GDP-mannose 4,6-dehyd 99.8 1.5E-18 3.2E-23 149.1 12.1 130 78-209 2-146 (340)
70 PRK13394 3-hydroxybutyrate deh 99.8 1.6E-18 3.5E-23 142.9 11.8 128 80-207 5-149 (262)
71 CHL00194 ycf39 Ycf39; Provisio 99.8 2.5E-18 5.5E-23 146.6 13.3 113 83-206 1-114 (317)
72 PLN02214 cinnamoyl-CoA reducta 99.8 2.5E-18 5.5E-23 148.2 13.4 121 80-207 8-133 (342)
73 TIGR01289 LPOR light-dependent 99.8 1.5E-18 3.3E-23 147.9 11.7 126 81-206 2-147 (314)
74 PRK11908 NAD-dependent epimera 99.8 1.9E-18 4.1E-23 148.9 12.3 122 82-208 1-124 (347)
75 PRK07814 short chain dehydroge 99.8 1.9E-18 4.1E-23 143.3 11.9 129 79-207 7-152 (263)
76 PRK06172 short chain dehydroge 99.8 1.7E-18 3.7E-23 142.5 11.4 131 78-208 3-150 (253)
77 PRK08643 acetoin reductase; Va 99.8 2.1E-18 4.7E-23 142.1 12.1 127 82-208 2-145 (256)
78 PLN00198 anthocyanidin reducta 99.8 2.3E-18 5.1E-23 147.8 12.7 126 80-208 7-137 (338)
79 PLN02572 UDP-sulfoquinovose sy 99.8 2.6E-18 5.6E-23 152.9 13.3 131 77-208 42-197 (442)
80 PRK12429 3-hydroxybutyrate deh 99.8 1.7E-18 3.6E-23 142.4 11.1 129 80-208 2-146 (258)
81 PRK06505 enoyl-(acyl carrier p 99.8 9.8E-19 2.1E-23 146.1 9.8 128 78-207 3-151 (271)
82 PRK07067 sorbitol dehydrogenas 99.8 1.3E-18 2.8E-23 143.6 10.4 127 79-206 3-144 (257)
83 PRK05693 short chain dehydroge 99.8 2.3E-18 4.9E-23 143.6 12.0 122 82-207 1-135 (274)
84 PRK07791 short chain dehydroge 99.8 1E-18 2.2E-23 147.0 9.8 128 80-207 4-162 (286)
85 PRK08063 enoyl-(acyl carrier p 99.8 1.9E-18 4.2E-23 141.6 11.2 129 80-208 2-147 (250)
86 PRK06935 2-deoxy-D-gluconate 3 99.8 1.9E-18 4.1E-23 142.8 11.2 130 78-208 11-156 (258)
87 PRK06463 fabG 3-ketoacyl-(acyl 99.8 2.7E-18 5.9E-23 141.6 12.1 126 78-207 3-143 (255)
88 PRK07035 short chain dehydroge 99.8 2.9E-18 6.2E-23 141.0 12.2 131 78-208 4-151 (252)
89 PRK08277 D-mannonate oxidoredu 99.8 2.2E-18 4.9E-23 143.8 11.6 130 79-208 7-167 (278)
90 PRK06128 oxidoreductase; Provi 99.8 2.1E-18 4.5E-23 146.0 11.5 130 79-208 52-198 (300)
91 PRK08862 short chain dehydroge 99.8 3E-18 6.6E-23 139.7 11.8 128 79-206 2-148 (227)
92 PRK07097 gluconate 5-dehydroge 99.8 3.5E-18 7.7E-23 141.8 12.4 129 78-206 6-150 (265)
93 PLN02896 cinnamyl-alcohol dehy 99.8 5.2E-18 1.1E-22 146.6 13.9 127 81-208 9-144 (353)
94 PRK09072 short chain dehydroge 99.8 3.6E-18 7.7E-23 141.5 12.4 129 79-207 2-144 (263)
95 PRK12367 short chain dehydroge 99.8 1.6E-18 3.5E-23 143.0 10.2 109 77-190 9-118 (245)
96 PRK08340 glucose-1-dehydrogena 99.8 2.9E-18 6.3E-23 141.8 11.7 126 83-208 1-144 (259)
97 PRK07576 short chain dehydroge 99.8 3E-18 6.5E-23 142.4 11.8 130 78-207 5-149 (264)
98 PRK06841 short chain dehydroge 99.8 3.4E-18 7.3E-23 140.7 12.0 128 79-207 12-153 (255)
99 TIGR01832 kduD 2-deoxy-D-gluco 99.8 3E-18 6.6E-23 140.4 11.7 128 80-208 3-146 (248)
100 PRK08213 gluconate 5-dehydroge 99.8 2.8E-18 6.2E-23 141.7 11.5 130 78-207 8-154 (259)
101 PRK06124 gluconate 5-dehydroge 99.8 4.2E-18 9.1E-23 140.3 12.3 130 78-207 7-152 (256)
102 PRK06523 short chain dehydroge 99.8 3.8E-18 8.2E-23 140.9 11.8 123 79-208 6-144 (260)
103 PRK07666 fabG 3-ketoacyl-(acyl 99.8 3.8E-18 8.3E-23 139.2 11.7 129 80-208 5-149 (239)
104 TIGR03206 benzo_BadH 2-hydroxy 99.8 3.6E-18 7.8E-23 139.9 11.6 128 81-208 2-145 (250)
105 PRK08303 short chain dehydroge 99.8 3E-18 6.5E-23 145.6 11.5 127 79-205 5-162 (305)
106 PRK07677 short chain dehydroge 99.8 3.3E-18 7.1E-23 140.9 11.3 126 82-207 1-143 (252)
107 PRK12936 3-ketoacyl-(acyl-carr 99.8 4.2E-18 9.1E-23 139.0 11.8 128 79-207 3-144 (245)
108 PRK12828 short chain dehydroge 99.8 3.3E-18 7.1E-23 138.8 11.0 130 79-208 4-147 (239)
109 PRK08594 enoyl-(acyl carrier p 99.8 4.5E-18 9.7E-23 141.0 11.8 129 79-207 4-153 (257)
110 PRK07985 oxidoreductase; Provi 99.8 3.4E-18 7.3E-23 144.5 11.1 130 79-208 46-192 (294)
111 PRK07454 short chain dehydroge 99.8 3.8E-18 8.1E-23 139.4 11.1 128 81-208 5-148 (241)
112 PLN02780 ketoreductase/ oxidor 99.8 3.2E-18 6.8E-23 146.4 11.1 127 81-207 52-198 (320)
113 PRK12939 short chain dehydroge 99.8 5.6E-18 1.2E-22 138.6 12.1 129 80-208 5-149 (250)
114 PRK08416 7-alpha-hydroxysteroi 99.8 3.6E-18 7.8E-23 141.4 11.0 130 78-207 4-157 (260)
115 PRK07533 enoyl-(acyl carrier p 99.8 3.6E-18 7.8E-23 141.5 10.9 128 78-207 6-154 (258)
116 KOG0725 Reductases with broad 99.8 5.9E-18 1.3E-22 141.4 12.1 131 78-208 4-156 (270)
117 PRK10538 malonic semialdehyde 99.8 6.2E-18 1.3E-22 139.0 12.1 124 83-207 1-139 (248)
118 PRK06500 short chain dehydroge 99.8 6.6E-18 1.4E-22 138.2 12.2 126 80-206 4-141 (249)
119 PRK07904 short chain dehydroge 99.8 6.8E-18 1.5E-22 139.6 12.3 127 81-207 7-151 (253)
120 PRK06113 7-alpha-hydroxysteroi 99.8 6.8E-18 1.5E-22 139.2 12.1 130 78-207 7-151 (255)
121 PRK06125 short chain dehydroge 99.8 8.1E-18 1.8E-22 139.1 12.3 129 79-207 4-145 (259)
122 PRK05855 short chain dehydroge 99.8 6E-18 1.3E-22 154.0 12.4 132 78-209 311-459 (582)
123 PF00106 adh_short: short chai 99.8 1.6E-18 3.5E-23 133.7 7.4 127 83-209 1-142 (167)
124 PRK06914 short chain dehydroge 99.8 6.7E-18 1.4E-22 141.0 11.6 126 81-207 2-145 (280)
125 PRK09134 short chain dehydroge 99.8 1E-17 2.2E-22 138.4 12.5 131 78-208 5-152 (258)
126 PRK08628 short chain dehydroge 99.8 6E-18 1.3E-22 139.5 11.1 130 78-208 3-146 (258)
127 PRK08159 enoyl-(acyl carrier p 99.8 7.5E-18 1.6E-22 140.8 11.6 126 80-207 8-154 (272)
128 PRK07984 enoyl-(acyl carrier p 99.8 5.5E-18 1.2E-22 141.0 10.7 126 80-207 4-151 (262)
129 KOG1200 Mitochondrial/plastidi 99.8 5.1E-18 1.1E-22 132.3 9.7 127 80-206 12-155 (256)
130 PRK12747 short chain dehydroge 99.8 8.3E-18 1.8E-22 138.3 11.5 129 80-208 2-151 (252)
131 PRK08690 enoyl-(acyl carrier p 99.8 6.1E-18 1.3E-22 140.4 10.7 126 80-207 4-152 (261)
132 PRK07102 short chain dehydroge 99.8 7.8E-18 1.7E-22 137.8 11.2 126 82-207 1-140 (243)
133 PRK12826 3-ketoacyl-(acyl-carr 99.8 9.5E-18 2.1E-22 137.2 11.7 127 80-206 4-146 (251)
134 PRK07775 short chain dehydroge 99.8 1.2E-17 2.5E-22 139.5 12.4 129 80-208 8-152 (274)
135 PRK08993 2-deoxy-D-gluconate 3 99.8 1.1E-17 2.4E-22 137.9 12.1 129 78-208 6-151 (253)
136 PRK06101 short chain dehydroge 99.8 9.1E-18 2E-22 137.4 11.5 124 82-207 1-133 (240)
137 PRK05650 short chain dehydroge 99.8 7.6E-18 1.6E-22 140.1 11.1 126 83-208 1-142 (270)
138 PRK06484 short chain dehydroge 99.8 7.4E-18 1.6E-22 152.4 11.9 129 79-208 266-407 (520)
139 PRK12384 sorbitol-6-phosphate 99.8 7.3E-18 1.6E-22 139.1 10.9 125 82-206 2-145 (259)
140 PRK07326 short chain dehydroge 99.8 9E-18 2E-22 136.6 11.3 128 80-207 4-145 (237)
141 PRK05653 fabG 3-ketoacyl-(acyl 99.7 1.2E-17 2.6E-22 136.0 11.9 128 79-206 2-145 (246)
142 PRK06171 sorbitol-6-phosphate 99.7 5.8E-18 1.3E-22 140.3 10.2 123 78-207 5-150 (266)
143 PRK06603 enoyl-(acyl carrier p 99.7 9.4E-18 2E-22 139.2 11.4 127 79-207 5-152 (260)
144 PRK05875 short chain dehydroge 99.7 1.1E-17 2.3E-22 139.5 11.7 130 79-208 4-152 (276)
145 PRK07074 short chain dehydroge 99.7 1.4E-17 3.1E-22 137.2 12.3 125 82-206 2-140 (257)
146 PRK08278 short chain dehydroge 99.7 9E-18 2E-22 140.2 11.1 130 78-207 2-154 (273)
147 PRK08642 fabG 3-ketoacyl-(acyl 99.7 1.3E-17 2.8E-22 136.8 11.9 128 79-207 2-151 (253)
148 PLN02240 UDP-glucose 4-epimera 99.7 8.5E-18 1.8E-22 144.7 11.3 130 78-208 1-138 (352)
149 PRK12746 short chain dehydroge 99.7 1.2E-17 2.5E-22 137.4 11.6 129 80-208 4-153 (254)
150 PRK05565 fabG 3-ketoacyl-(acyl 99.7 1.3E-17 2.9E-22 136.0 11.6 129 79-207 2-147 (247)
151 PRK07889 enoyl-(acyl carrier p 99.7 1.3E-17 2.8E-22 138.1 11.5 124 80-204 5-148 (256)
152 PRK07792 fabG 3-ketoacyl-(acyl 99.7 8.3E-18 1.8E-22 142.9 10.6 130 78-207 8-160 (306)
153 TIGR01963 PHB_DH 3-hydroxybuty 99.7 1.4E-17 3E-22 136.7 11.2 127 82-208 1-143 (255)
154 PLN02583 cinnamoyl-CoA reducta 99.7 2.5E-17 5.5E-22 139.3 13.1 123 81-207 5-133 (297)
155 PRK07370 enoyl-(acyl carrier p 99.7 7.8E-18 1.7E-22 139.6 9.7 126 80-207 4-153 (258)
156 PRK06484 short chain dehydroge 99.7 1.5E-17 3.3E-22 150.4 12.4 128 80-208 3-147 (520)
157 PRK06057 short chain dehydroge 99.7 1.7E-17 3.7E-22 136.8 11.5 123 80-205 5-143 (255)
158 PRK10217 dTDP-glucose 4,6-dehy 99.7 1.1E-17 2.5E-22 144.3 10.9 125 82-208 1-140 (355)
159 PRK08264 short chain dehydroge 99.7 2.6E-17 5.7E-22 134.0 12.4 126 78-208 2-139 (238)
160 PRK08226 short chain dehydroge 99.7 2.5E-17 5.4E-22 136.2 12.3 125 80-205 4-144 (263)
161 PRK06181 short chain dehydroge 99.7 1.9E-17 4.2E-22 136.9 11.6 127 82-208 1-143 (263)
162 PLN02695 GDP-D-mannose-3',5'-e 99.7 2.6E-17 5.7E-22 143.4 12.9 126 78-208 17-143 (370)
163 PRK12748 3-ketoacyl-(acyl-carr 99.7 2E-17 4.3E-22 136.5 11.5 130 79-208 2-160 (256)
164 PRK07806 short chain dehydroge 99.7 2.2E-17 4.7E-22 135.4 11.6 123 80-205 4-138 (248)
165 PRK12938 acetyacetyl-CoA reduc 99.7 1.9E-17 4.2E-22 135.5 11.2 126 81-206 2-144 (246)
166 PRK05599 hypothetical protein; 99.7 2.2E-17 4.8E-22 135.9 11.6 125 83-208 1-143 (246)
167 PLN00015 protochlorophyllide r 99.7 1.6E-17 3.5E-22 141.1 11.0 121 86-206 1-141 (308)
168 PRK08125 bifunctional UDP-gluc 99.7 1.7E-17 3.7E-22 154.4 12.0 124 80-208 313-438 (660)
169 PRK07201 short chain dehydroge 99.7 2.7E-17 5.9E-22 152.6 13.3 131 78-208 367-515 (657)
170 PLN02730 enoyl-[acyl-carrier-p 99.7 1.2E-17 2.6E-22 141.8 9.9 130 78-208 5-185 (303)
171 PRK06701 short chain dehydroge 99.7 2.4E-17 5.3E-22 139.0 11.6 131 78-208 42-188 (290)
172 PRK12935 acetoacetyl-CoA reduc 99.7 3.4E-17 7.4E-22 134.1 12.0 128 80-207 4-148 (247)
173 PRK06949 short chain dehydroge 99.7 2E-17 4.3E-22 136.2 10.6 130 79-208 6-159 (258)
174 PRK12743 oxidoreductase; Provi 99.7 2.9E-17 6.3E-22 135.6 11.6 127 81-207 1-145 (256)
175 PRK12937 short chain dehydroge 99.7 1.9E-17 4.2E-22 135.2 10.4 130 79-208 2-146 (245)
176 PRK12742 oxidoreductase; Provi 99.7 4.2E-17 9.2E-22 132.6 12.3 124 80-206 4-136 (237)
177 PRK07060 short chain dehydroge 99.7 2E-17 4.4E-22 135.1 10.4 127 79-208 6-143 (245)
178 PRK07424 bifunctional sterol d 99.7 2.6E-17 5.6E-22 144.5 11.7 110 79-190 175-284 (406)
179 PRK12829 short chain dehydroge 99.7 3.4E-17 7.5E-22 135.1 11.8 128 79-206 8-151 (264)
180 PRK06483 dihydromonapterin red 99.7 2.3E-17 5E-22 134.5 10.6 123 82-207 2-140 (236)
181 PRK06997 enoyl-(acyl carrier p 99.7 2E-17 4.3E-22 137.4 10.4 126 80-207 4-151 (260)
182 PRK12745 3-ketoacyl-(acyl-carr 99.7 1.8E-17 3.9E-22 136.3 10.0 127 82-208 2-153 (256)
183 PRK12827 short chain dehydroge 99.7 3.5E-17 7.5E-22 133.7 11.4 129 80-208 4-153 (249)
184 PLN00141 Tic62-NAD(P)-related 99.7 7.8E-17 1.7E-21 133.0 13.5 122 78-207 13-137 (251)
185 KOG1209 1-Acyl dihydroxyaceton 99.7 5.3E-18 1.2E-22 134.0 6.0 126 82-210 7-147 (289)
186 PRK08936 glucose-1-dehydrogena 99.7 5.4E-17 1.2E-21 134.3 12.4 130 78-207 3-150 (261)
187 PRK08217 fabG 3-ketoacyl-(acyl 99.7 5.7E-17 1.2E-21 132.8 12.3 129 80-208 3-157 (253)
188 TIGR02415 23BDH acetoin reduct 99.7 3.7E-17 8.1E-22 134.3 11.2 125 83-207 1-142 (254)
189 PRK10084 dTDP-glucose 4,6 dehy 99.7 4.8E-17 1E-21 140.2 12.3 125 83-208 1-139 (352)
190 PRK07832 short chain dehydroge 99.7 4.4E-17 9.6E-22 135.8 11.7 125 83-207 1-143 (272)
191 PRK07831 short chain dehydroge 99.7 4.8E-17 1E-21 134.7 11.7 129 79-207 14-162 (262)
192 PRK05884 short chain dehydroge 99.7 4.7E-17 1E-21 132.2 11.4 119 83-204 1-133 (223)
193 KOG1371 UDP-glucose 4-epimeras 99.7 2.9E-17 6.3E-22 137.1 10.2 126 82-209 2-135 (343)
194 TIGR03466 HpnA hopanoid-associ 99.7 3.7E-17 8.1E-22 138.8 10.7 118 83-208 1-119 (328)
195 PRK06947 glucose-1-dehydrogena 99.7 6.3E-17 1.4E-21 132.6 11.6 126 82-207 2-148 (248)
196 PLN02686 cinnamoyl-CoA reducta 99.7 9E-17 1.9E-21 139.9 13.1 125 78-204 49-182 (367)
197 PRK12859 3-ketoacyl-(acyl-carr 99.7 7.2E-17 1.6E-21 133.4 11.9 129 79-207 3-160 (256)
198 PRK10675 UDP-galactose-4-epime 99.7 7.5E-17 1.6E-21 138.1 12.4 125 83-208 1-130 (338)
199 PRK06940 short chain dehydroge 99.7 6.2E-17 1.3E-21 135.4 11.5 120 82-207 2-131 (275)
200 KOG1610 Corticosteroid 11-beta 99.7 4.6E-17 1E-21 135.5 10.5 132 78-209 25-172 (322)
201 PLN02657 3,8-divinyl protochlo 99.7 1.1E-16 2.4E-21 140.4 13.3 123 79-207 57-187 (390)
202 PRK06123 short chain dehydroge 99.7 6E-17 1.3E-21 132.6 10.9 127 82-208 2-149 (248)
203 PRK05557 fabG 3-ketoacyl-(acyl 99.7 9.9E-17 2.2E-21 130.7 11.9 129 79-207 2-147 (248)
204 PRK12825 fabG 3-ketoacyl-(acyl 99.7 1E-16 2.3E-21 130.5 12.0 129 80-208 4-149 (249)
205 KOG4169 15-hydroxyprostaglandi 99.7 2.5E-17 5.5E-22 131.3 8.0 127 79-210 2-145 (261)
206 PRK07041 short chain dehydroge 99.7 5.8E-17 1.3E-21 131.4 10.4 123 86-208 1-130 (230)
207 PRK06198 short chain dehydroge 99.7 9.4E-17 2E-21 132.5 11.8 129 80-208 4-150 (260)
208 PRK08945 putative oxoacyl-(acy 99.7 9.1E-17 2E-21 131.8 11.6 130 78-207 8-157 (247)
209 PRK08220 2,3-dihydroxybenzoate 99.7 1E-16 2.2E-21 131.6 11.8 124 78-208 4-141 (252)
210 PRK09987 dTDP-4-dehydrorhamnos 99.7 3.3E-17 7.2E-22 138.7 9.2 109 83-208 1-110 (299)
211 PRK06550 fabG 3-ketoacyl-(acyl 99.7 4.5E-17 9.8E-22 132.4 9.6 121 79-207 2-132 (235)
212 PRK08219 short chain dehydroge 99.7 1.5E-16 3.2E-21 128.4 12.4 125 81-208 2-135 (227)
213 PRK12824 acetoacetyl-CoA reduc 99.7 1.3E-16 2.9E-21 130.1 12.0 127 82-208 2-145 (245)
214 PRK08703 short chain dehydroge 99.7 1E-16 2.3E-21 130.8 11.3 129 79-207 3-152 (239)
215 PRK07023 short chain dehydroge 99.7 4.3E-17 9.4E-22 133.4 8.9 124 82-208 1-143 (243)
216 PLN02206 UDP-glucuronate decar 99.7 8.2E-17 1.8E-21 143.2 11.3 121 81-208 118-239 (442)
217 PRK09730 putative NAD(P)-bindi 99.7 5.9E-17 1.3E-21 132.3 9.5 127 82-208 1-148 (247)
218 PLN02260 probable rhamnose bio 99.7 1.2E-16 2.6E-21 148.9 12.5 128 81-209 5-139 (668)
219 TIGR01829 AcAcCoA_reduct aceto 99.7 1.2E-16 2.7E-21 130.1 11.1 125 83-207 1-142 (242)
220 PRK12744 short chain dehydroge 99.7 1.1E-16 2.3E-21 132.2 10.6 125 79-203 5-148 (257)
221 PRK09135 pteridine reductase; 99.7 2E-16 4.4E-21 129.2 12.1 127 80-206 4-147 (249)
222 PRK06077 fabG 3-ketoacyl-(acyl 99.7 1.7E-16 3.6E-21 130.2 11.5 130 79-208 3-147 (252)
223 TIGR02632 RhaD_aldol-ADH rhamn 99.7 2.1E-16 4.6E-21 147.2 13.2 131 78-208 410-559 (676)
224 PRK07069 short chain dehydroge 99.7 1.6E-16 3.5E-21 130.2 11.0 124 85-208 2-144 (251)
225 PLN02166 dTDP-glucose 4,6-dehy 99.7 1.5E-16 3.2E-21 141.4 11.5 121 81-208 119-240 (436)
226 COG0451 WcaG Nucleoside-diphos 99.7 8.7E-17 1.9E-21 135.7 9.3 119 84-208 2-122 (314)
227 PRK06953 short chain dehydroge 99.7 3.7E-16 8E-21 126.4 11.6 121 82-206 1-134 (222)
228 COG1028 FabG Dehydrogenases wi 99.7 2.3E-16 5E-21 129.5 10.2 128 79-206 2-147 (251)
229 TIGR01831 fabG_rel 3-oxoacyl-( 99.7 2.4E-16 5.2E-21 128.4 10.3 124 85-208 1-142 (239)
230 PRK08017 oxidoreductase; Provi 99.7 4.9E-16 1.1E-20 127.8 12.0 122 82-207 2-138 (256)
231 PRK07577 short chain dehydroge 99.7 3.5E-16 7.6E-21 127.0 10.9 118 81-207 2-132 (234)
232 PRK08324 short chain dehydroge 99.7 5.4E-16 1.2E-20 144.8 13.4 131 78-208 418-564 (681)
233 PRK06720 hypothetical protein; 99.7 8.8E-16 1.9E-20 119.9 12.4 129 78-206 12-161 (169)
234 PRK05786 fabG 3-ketoacyl-(acyl 99.7 5E-16 1.1E-20 126.4 11.2 126 80-205 3-139 (238)
235 TIGR02685 pter_reduc_Leis pter 99.7 7.3E-16 1.6E-20 128.1 12.3 125 83-207 2-165 (267)
236 TIGR01181 dTDP_gluc_dehyt dTDP 99.7 3.5E-16 7.7E-21 132.0 10.5 123 84-208 1-131 (317)
237 PRK08177 short chain dehydroge 99.7 4.4E-16 9.6E-21 126.2 10.1 122 82-206 1-135 (225)
238 KOG1207 Diacetyl reductase/L-x 99.7 8.7E-17 1.9E-21 123.5 5.5 129 79-208 4-143 (245)
239 TIGR01500 sepiapter_red sepiap 99.7 3.7E-16 8E-21 129.1 9.5 125 84-208 2-157 (256)
240 COG1088 RfbB dTDP-D-glucose 4, 99.7 5E-16 1.1E-20 128.3 9.7 124 83-208 1-132 (340)
241 PRK06924 short chain dehydroge 99.6 1.1E-15 2.3E-20 125.5 10.0 126 82-208 1-147 (251)
242 PRK08261 fabG 3-ketoacyl-(acyl 99.6 1.7E-15 3.7E-20 135.0 12.0 126 79-207 207-348 (450)
243 PF13460 NAD_binding_10: NADH( 99.6 4.7E-15 1E-19 116.3 12.9 104 85-209 1-105 (183)
244 TIGR01830 3oxo_ACP_reduc 3-oxo 99.6 1.7E-15 3.7E-20 123.0 10.5 123 85-207 1-140 (239)
245 PRK07578 short chain dehydroge 99.6 1.6E-15 3.5E-20 120.7 9.6 109 83-207 1-117 (199)
246 TIGR01179 galE UDP-glucose-4-e 99.6 2.8E-15 6.1E-20 126.9 11.6 124 84-208 1-127 (328)
247 KOG1014 17 beta-hydroxysteroid 99.6 1.5E-15 3.2E-20 126.4 9.5 130 80-209 47-194 (312)
248 PF01370 Epimerase: NAD depend 99.6 5.3E-16 1.2E-20 125.7 6.8 120 85-209 1-123 (236)
249 KOG1430 C-3 sterol dehydrogena 99.6 1.6E-15 3.4E-20 130.3 9.6 126 81-209 3-133 (361)
250 PRK07201 short chain dehydroge 99.6 4.2E-15 9.1E-20 138.0 12.7 120 83-208 1-131 (657)
251 TIGR02197 heptose_epim ADP-L-g 99.6 2.5E-15 5.3E-20 127.1 10.1 117 85-209 1-121 (314)
252 smart00822 PKS_KR This enzymat 99.6 3.5E-15 7.7E-20 114.8 9.5 124 83-206 1-140 (180)
253 PRK09009 C factor cell-cell si 99.6 4.3E-15 9.3E-20 120.9 9.3 117 83-205 1-135 (235)
254 TIGR01214 rmlD dTDP-4-dehydror 99.6 3.9E-15 8.4E-20 124.6 9.2 104 84-208 1-106 (287)
255 PLN02725 GDP-4-keto-6-deoxyman 99.6 3.6E-15 7.9E-20 125.7 7.9 104 86-208 1-107 (306)
256 TIGR01746 Thioester-redct thio 99.6 1.3E-14 2.9E-19 124.5 11.2 120 84-208 1-142 (367)
257 PRK11150 rfaD ADP-L-glycero-D- 99.6 6E-15 1.3E-19 124.9 8.6 114 85-209 2-123 (308)
258 PRK06300 enoyl-(acyl carrier p 99.6 5E-15 1.1E-19 125.6 7.7 129 78-207 4-183 (299)
259 PRK05865 hypothetical protein; 99.6 2E-14 4.3E-19 135.6 12.1 103 83-203 1-104 (854)
260 PLN02996 fatty acyl-CoA reduct 99.6 9.7E-15 2.1E-19 131.6 9.6 124 80-208 9-167 (491)
261 KOG1611 Predicted short chain- 99.6 2.6E-14 5.6E-19 114.1 10.8 126 82-207 3-160 (249)
262 PLN02778 3,5-epimerase/4-reduc 99.6 2E-14 4.3E-19 121.8 10.1 103 82-207 9-115 (298)
263 KOG1210 Predicted 3-ketosphing 99.6 2.4E-14 5.1E-19 119.3 9.7 125 83-207 34-177 (331)
264 PF04321 RmlD_sub_bind: RmlD s 99.5 1.5E-15 3.3E-20 128.0 2.6 111 83-213 1-113 (286)
265 PLN02503 fatty acyl-CoA reduct 99.5 4.4E-14 9.4E-19 129.4 11.3 126 80-209 117-275 (605)
266 PF07993 NAD_binding_4: Male s 99.5 5E-14 1.1E-18 116.3 10.5 115 87-206 1-139 (249)
267 TIGR02813 omega_3_PfaA polyket 99.5 3.5E-14 7.5E-19 145.9 11.5 127 81-207 1996-2181(2582)
268 COG1091 RfbD dTDP-4-dehydrorha 99.5 3.2E-14 7E-19 118.3 9.0 109 84-213 2-112 (281)
269 KOG1429 dTDP-glucose 4-6-dehyd 99.5 3.3E-14 7.2E-19 116.8 8.1 124 78-208 23-147 (350)
270 PRK12320 hypothetical protein; 99.5 1.3E-13 2.8E-18 127.8 12.1 104 83-204 1-104 (699)
271 KOG1199 Short-chain alcohol de 99.5 7.5E-15 1.6E-19 112.8 2.7 128 80-208 7-160 (260)
272 PLN00016 RNA-binding protein; 99.5 2E-13 4.3E-18 119.2 11.0 111 80-209 50-172 (378)
273 PF08659 KR: KR domain; Inter 99.5 1.4E-13 2.9E-18 108.6 7.4 123 84-206 2-140 (181)
274 PF13561 adh_short_C2: Enoyl-( 99.5 3.8E-14 8.3E-19 116.0 3.4 117 89-208 1-140 (241)
275 KOG1478 3-keto sterol reductas 99.4 2.9E-13 6.2E-18 109.8 8.1 126 81-206 2-179 (341)
276 TIGR03649 ergot_EASG ergot alk 99.4 6.7E-13 1.5E-17 111.3 9.1 102 84-206 1-109 (285)
277 TIGR01777 yfcH conserved hypot 99.4 6.8E-13 1.5E-17 110.9 8.6 113 85-208 1-118 (292)
278 PLN02260 probable rhamnose bio 99.4 1.8E-12 3.9E-17 121.0 11.3 105 81-208 379-487 (668)
279 COG3320 Putative dehydrogenase 99.4 2.9E-12 6.3E-17 109.6 9.4 122 83-208 1-141 (382)
280 KOG1203 Predicted dehydrogenas 99.3 3E-11 6.5E-16 105.2 13.7 132 78-213 75-212 (411)
281 COG1089 Gmd GDP-D-mannose dehy 99.3 1.1E-11 2.3E-16 102.3 7.7 126 81-207 1-136 (345)
282 COG1090 Predicted nucleoside-d 99.3 1.8E-11 3.9E-16 100.7 8.7 112 85-208 1-117 (297)
283 PF05368 NmrA: NmrA-like famil 99.2 3E-11 6.6E-16 98.4 8.8 104 85-206 1-107 (233)
284 COG0702 Predicted nucleoside-d 99.2 1.1E-10 2.4E-15 96.6 11.8 114 83-209 1-114 (275)
285 TIGR03443 alpha_am_amid L-amin 99.2 4.3E-11 9.4E-16 119.6 9.8 121 82-207 971-1114(1389)
286 KOG2865 NADH:ubiquinone oxidor 99.2 7.9E-11 1.7E-15 97.3 7.9 123 78-206 57-181 (391)
287 PRK08309 short chain dehydroge 99.2 3.1E-10 6.7E-15 89.3 10.0 103 83-205 1-115 (177)
288 PRK12428 3-alpha-hydroxysteroi 99.1 2.3E-10 5E-15 93.8 6.1 96 98-207 1-102 (241)
289 PRK13656 trans-2-enoyl-CoA red 99.0 1E-09 2.3E-14 95.2 9.2 81 81-163 40-143 (398)
290 COG2910 Putative NADH-flavin r 99.0 3.6E-09 7.8E-14 82.3 10.6 109 83-207 1-110 (211)
291 KOG0747 Putative NAD+-dependen 99.0 3.2E-10 7E-15 93.5 4.5 127 83-210 7-140 (331)
292 KOG1204 Predicted dehydrogenas 99.0 1.7E-10 3.6E-15 92.5 2.1 128 81-209 5-152 (253)
293 PTZ00325 malate dehydrogenase; 99.0 4.7E-09 1E-13 89.7 10.2 121 80-206 6-129 (321)
294 KOG1221 Acyl-CoA reductase [Li 98.9 4.4E-09 9.6E-14 93.1 6.8 123 80-206 10-159 (467)
295 cd01078 NAD_bind_H4MPT_DH NADP 98.8 1.5E-08 3.3E-13 80.6 8.6 84 79-163 25-109 (194)
296 PRK05579 bifunctional phosphop 98.8 7.7E-09 1.7E-13 90.9 7.5 77 79-164 185-280 (399)
297 KOG4039 Serine/threonine kinas 98.8 1.2E-08 2.5E-13 79.1 7.4 122 80-211 16-140 (238)
298 COG1748 LYS9 Saccharopine dehy 98.8 2.3E-08 5E-13 87.0 10.0 79 82-163 1-80 (389)
299 TIGR02114 coaB_strep phosphopa 98.8 5.1E-09 1.1E-13 85.5 4.7 71 84-164 16-93 (227)
300 PLN00106 malate dehydrogenase 98.8 2.9E-08 6.4E-13 85.0 9.0 119 81-205 17-138 (323)
301 PRK12548 shikimate 5-dehydroge 98.8 2.6E-08 5.6E-13 84.2 8.1 82 80-163 124-211 (289)
302 PRK06732 phosphopantothenate-- 98.7 2.7E-08 5.8E-13 81.4 6.1 74 84-163 17-93 (229)
303 PF03435 Saccharop_dh: Sacchar 98.7 7.7E-08 1.7E-12 84.3 8.8 76 85-162 1-78 (386)
304 PRK09620 hypothetical protein; 98.7 3.4E-08 7.3E-13 80.7 5.5 82 80-164 1-100 (229)
305 COG0623 FabI Enoyl-[acyl-carri 98.6 4.9E-07 1.1E-11 72.9 10.3 126 78-205 2-148 (259)
306 cd01336 MDH_cytoplasmic_cytoso 98.6 2.9E-07 6.3E-12 79.1 9.1 115 83-202 3-129 (325)
307 TIGR00521 coaBC_dfp phosphopan 98.5 1.2E-07 2.7E-12 83.1 6.0 104 79-191 182-310 (390)
308 PF01488 Shikimate_DH: Shikima 98.5 6.6E-07 1.4E-11 67.2 8.7 79 78-163 8-87 (135)
309 KOG1372 GDP-mannose 4,6 dehydr 98.5 1.7E-07 3.7E-12 76.4 5.4 125 82-207 28-165 (376)
310 PRK14982 acyl-ACP reductase; P 98.5 4E-07 8.6E-12 78.3 7.7 74 79-163 152-227 (340)
311 PRK05086 malate dehydrogenase; 98.5 1.1E-06 2.5E-11 75.0 10.5 116 83-205 1-121 (312)
312 KOG1431 GDP-L-fucose synthetas 98.5 1.6E-07 3.5E-12 75.6 4.4 106 82-207 1-112 (315)
313 PRK14106 murD UDP-N-acetylmura 98.4 1.2E-06 2.6E-11 78.2 8.6 77 79-162 2-79 (450)
314 KOG2774 NAD dependent epimeras 98.3 5.3E-07 1.1E-11 73.1 4.4 121 81-209 43-166 (366)
315 KOG2733 Uncharacterized membra 98.2 2.3E-06 5E-11 73.0 4.9 80 84-164 7-96 (423)
316 cd00704 MDH Malate dehydrogena 98.2 1.6E-05 3.5E-10 68.2 10.0 102 84-201 2-126 (323)
317 PF00056 Ldh_1_N: lactate/mala 98.1 6.2E-05 1.3E-09 56.9 11.8 110 83-201 1-118 (141)
318 TIGR01758 MDH_euk_cyt malate d 98.1 1.8E-05 3.9E-10 68.0 9.6 104 84-201 1-125 (324)
319 cd01065 NAD_bind_Shikimate_DH 98.1 1.5E-05 3.1E-10 60.7 8.1 76 80-163 17-93 (155)
320 COG0569 TrkA K+ transport syst 98.1 1.9E-05 4.1E-10 64.4 8.3 76 83-161 1-76 (225)
321 PF02254 TrkA_N: TrkA-N domain 98.0 2.2E-05 4.7E-10 56.9 7.4 71 85-160 1-71 (116)
322 PRK00258 aroE shikimate 5-dehy 98.0 3E-05 6.6E-10 65.2 9.1 77 79-163 120-197 (278)
323 TIGR00715 precor6x_red precorr 98.0 1.7E-05 3.7E-10 65.9 6.2 75 83-162 1-76 (256)
324 PF04127 DFP: DNA / pantothena 98.0 3E-05 6.4E-10 61.4 7.2 76 80-164 1-95 (185)
325 PRK00066 ldh L-lactate dehydro 97.9 6.3E-05 1.4E-09 64.4 9.5 110 80-201 4-122 (315)
326 PRK09496 trkA potassium transp 97.9 4.6E-05 9.9E-10 68.0 8.7 74 83-160 1-74 (453)
327 TIGR00507 aroE shikimate 5-deh 97.9 5.8E-05 1.3E-09 63.1 8.8 74 81-163 116-190 (270)
328 PLN02520 bifunctional 3-dehydr 97.9 4.1E-05 8.8E-10 70.0 8.3 76 79-163 376-451 (529)
329 PRK02472 murD UDP-N-acetylmura 97.9 3.8E-05 8.2E-10 68.6 7.5 78 79-163 2-80 (447)
330 cd05291 HicDH_like L-2-hydroxy 97.8 0.00013 2.8E-09 62.2 9.4 107 83-201 1-117 (306)
331 PRK09496 trkA potassium transp 97.8 9.7E-05 2.1E-09 65.9 9.0 78 80-160 229-306 (453)
332 cd01075 NAD_bind_Leu_Phe_Val_D 97.8 8.9E-05 1.9E-09 59.4 7.7 71 78-160 24-94 (200)
333 cd05294 LDH-like_MDH_nadp A la 97.8 8.2E-05 1.8E-09 63.5 8.0 112 83-202 1-122 (309)
334 PLN02968 Probable N-acetyl-gam 97.8 0.0001 2.2E-09 64.7 8.4 103 81-207 37-140 (381)
335 COG3268 Uncharacterized conser 97.7 7.7E-05 1.7E-09 63.4 5.3 77 83-163 7-83 (382)
336 PRK12475 thiamine/molybdopteri 97.7 0.00043 9.4E-09 59.8 10.0 78 79-159 21-124 (338)
337 PRK10669 putative cation:proto 97.6 0.00014 3E-09 67.0 7.2 73 83-160 418-490 (558)
338 COG0169 AroE Shikimate 5-dehyd 97.6 0.00022 4.7E-09 60.1 7.7 78 80-163 124-202 (283)
339 PRK13940 glutamyl-tRNA reducta 97.6 0.00021 4.6E-09 63.4 7.8 76 79-163 178-254 (414)
340 PRK12549 shikimate 5-dehydroge 97.6 0.00029 6.3E-09 59.5 8.0 73 80-159 125-200 (284)
341 PRK07688 thiamine/molybdopteri 97.6 0.00054 1.2E-08 59.3 9.7 107 80-207 22-154 (339)
342 PRK09310 aroDE bifunctional 3- 97.6 0.00031 6.7E-09 63.5 8.5 73 79-162 329-401 (477)
343 PLN02819 lysine-ketoglutarate 97.6 0.00043 9.4E-09 67.5 9.8 78 81-162 568-659 (1042)
344 TIGR00518 alaDH alanine dehydr 97.6 0.00042 9.2E-09 60.6 8.9 76 80-161 165-240 (370)
345 TIGR01809 Shik-DH-AROM shikima 97.6 0.00034 7.3E-09 59.0 7.8 79 80-163 123-202 (282)
346 TIGR02356 adenyl_thiF thiazole 97.5 0.00068 1.5E-08 54.3 9.1 78 80-160 19-120 (202)
347 TIGR02853 spore_dpaA dipicolin 97.5 0.00047 1E-08 58.3 8.5 71 79-160 148-218 (287)
348 cd01337 MDH_glyoxysomal_mitoch 97.5 0.00053 1.1E-08 58.6 8.8 112 83-202 1-118 (310)
349 COG2130 Putative NADP-dependen 97.5 0.00049 1.1E-08 58.0 8.2 106 80-212 149-260 (340)
350 cd08266 Zn_ADH_like1 Alcohol d 97.5 0.0016 3.4E-08 55.0 11.6 76 81-161 166-245 (342)
351 cd08295 double_bond_reductase_ 97.5 0.00039 8.4E-09 59.6 7.9 77 81-161 151-231 (338)
352 COG0604 Qor NADPH:quinone redu 97.5 0.00024 5.1E-09 61.2 6.1 75 82-161 143-221 (326)
353 cd01338 MDH_choloroplast_like 97.5 0.00053 1.2E-08 58.9 8.0 113 83-201 3-128 (322)
354 PRK03659 glutathione-regulated 97.4 0.00046 9.9E-09 64.2 7.7 74 82-160 400-473 (601)
355 cd08293 PTGR2 Prostaglandin re 97.4 0.00072 1.6E-08 57.9 8.1 76 82-161 155-234 (345)
356 TIGR01759 MalateDH-SF1 malate 97.4 0.0012 2.5E-08 56.9 9.2 113 83-201 4-129 (323)
357 PRK03562 glutathione-regulated 97.4 0.00053 1.1E-08 64.0 7.6 74 82-160 400-473 (621)
358 cd08259 Zn_ADH5 Alcohol dehydr 97.4 0.00079 1.7E-08 56.9 8.1 74 81-161 162-236 (332)
359 PRK06223 malate dehydrogenase; 97.4 0.0011 2.4E-08 56.4 8.8 114 82-201 2-119 (307)
360 PF00899 ThiF: ThiF family; I 97.4 0.0018 3.9E-08 48.3 9.0 105 82-207 2-130 (135)
361 PRK05442 malate dehydrogenase; 97.4 0.00082 1.8E-08 57.8 7.9 114 82-201 4-130 (326)
362 PRK00045 hemA glutamyl-tRNA re 97.4 0.00085 1.8E-08 59.8 8.3 73 80-162 180-253 (423)
363 cd00650 LDH_MDH_like NAD-depen 97.4 0.00065 1.4E-08 56.6 7.1 112 85-201 1-119 (263)
364 PTZ00117 malate dehydrogenase; 97.3 0.0011 2.4E-08 56.9 8.5 115 81-201 4-122 (319)
365 PRK04148 hypothetical protein; 97.3 0.00098 2.1E-08 49.9 7.1 69 81-158 16-84 (134)
366 PRK14874 aspartate-semialdehyd 97.3 0.00048 1E-08 59.5 6.3 70 82-161 1-73 (334)
367 PLN03154 putative allyl alcoho 97.3 0.00078 1.7E-08 58.2 7.6 76 81-160 158-237 (348)
368 PRK08306 dipicolinate synthase 97.3 0.0013 2.8E-08 55.8 8.8 71 79-160 149-219 (296)
369 TIGR02825 B4_12hDH leukotriene 97.3 0.0013 2.8E-08 56.0 8.8 75 81-160 138-216 (325)
370 COG0039 Mdh Malate/lactate deh 97.3 0.0013 2.9E-08 56.0 8.6 113 83-201 1-117 (313)
371 PRK14027 quinate/shikimate deh 97.3 0.00071 1.5E-08 57.1 6.9 78 80-162 125-205 (283)
372 cd08294 leukotriene_B4_DH_like 97.3 0.0012 2.6E-08 55.9 8.3 75 81-160 143-220 (329)
373 PRK12749 quinate/shikimate deh 97.3 0.0016 3.4E-08 55.2 8.8 81 80-162 122-207 (288)
374 PLN02602 lactate dehydrogenase 97.3 0.0014 3.1E-08 56.9 8.6 108 83-201 38-154 (350)
375 cd05213 NAD_bind_Glutamyl_tRNA 97.3 0.0011 2.5E-08 56.6 7.9 73 80-162 176-249 (311)
376 PLN00203 glutamyl-tRNA reducta 97.3 0.0014 3E-08 59.8 8.8 76 80-162 264-340 (519)
377 cd05293 LDH_1 A subgroup of L- 97.3 0.0013 2.9E-08 56.2 7.9 108 83-201 4-120 (312)
378 TIGR01035 hemA glutamyl-tRNA r 97.2 0.0012 2.6E-08 58.7 7.9 74 79-162 177-251 (417)
379 cd00757 ThiF_MoeB_HesA_family 97.2 0.0041 8.8E-08 50.7 10.4 78 80-160 19-120 (228)
380 cd08253 zeta_crystallin Zeta-c 97.2 0.0015 3.2E-08 54.6 8.0 76 81-161 144-223 (325)
381 TIGR01772 MDH_euk_gproteo mala 97.2 0.002 4.4E-08 55.1 8.8 111 84-201 1-116 (312)
382 PLN00112 malate dehydrogenase 97.2 0.0015 3.3E-08 58.3 8.3 113 83-201 101-226 (444)
383 cd01484 E1-2_like Ubiquitin ac 97.2 0.0078 1.7E-07 49.4 11.5 75 84-159 1-99 (234)
384 PRK14192 bifunctional 5,10-met 97.2 0.002 4.3E-08 54.4 8.0 43 79-121 156-198 (283)
385 PRK13982 bifunctional SbtC-lik 97.1 0.0013 2.7E-08 59.3 6.9 77 79-164 253-347 (475)
386 TIGR01915 npdG NADPH-dependent 97.1 0.0011 2.4E-08 53.6 6.1 41 83-123 1-41 (219)
387 PF02826 2-Hacid_dh_C: D-isome 97.1 0.0013 2.9E-08 51.5 6.3 42 78-120 32-73 (178)
388 COG1064 AdhP Zn-dependent alco 97.1 0.0028 6E-08 54.6 8.4 73 81-160 166-238 (339)
389 KOG1198 Zinc-binding oxidoredu 97.1 0.0021 4.6E-08 55.8 7.7 78 80-162 156-236 (347)
390 cd05292 LDH_2 A subgroup of L- 97.1 0.0044 9.5E-08 52.9 9.5 107 83-201 1-116 (308)
391 cd00300 LDH_like L-lactate deh 97.1 0.0021 4.6E-08 54.6 7.5 109 85-201 1-115 (300)
392 PRK05690 molybdopterin biosynt 97.1 0.0088 1.9E-07 49.4 10.9 36 79-115 29-65 (245)
393 PRK08762 molybdopterin biosynt 97.1 0.0045 9.7E-08 54.3 9.6 78 80-160 133-234 (376)
394 cd05295 MDH_like Malate dehydr 97.1 0.002 4.3E-08 57.6 7.4 109 83-202 124-250 (452)
395 PTZ00082 L-lactate dehydrogena 97.1 0.0034 7.4E-08 53.9 8.6 112 81-201 5-128 (321)
396 PRK08644 thiamine biosynthesis 97.1 0.0045 9.8E-08 50.0 8.8 36 79-115 25-61 (212)
397 TIGR01757 Malate-DH_plant mala 97.0 0.0021 4.5E-08 56.5 7.2 113 83-201 45-170 (387)
398 cd05276 p53_inducible_oxidored 97.0 0.0031 6.8E-08 52.5 8.0 76 81-161 139-218 (323)
399 PRK08655 prephenate dehydrogen 97.0 0.0022 4.7E-08 57.4 7.3 41 83-123 1-41 (437)
400 cd01483 E1_enzyme_family Super 97.0 0.017 3.7E-07 43.3 11.2 31 84-115 1-32 (143)
401 KOG4288 Predicted oxidoreducta 97.0 0.0012 2.5E-08 53.7 4.9 112 83-205 53-165 (283)
402 PRK00436 argC N-acetyl-gamma-g 97.0 0.0031 6.8E-08 54.6 7.7 74 82-160 2-77 (343)
403 PRK15116 sulfur acceptor prote 97.0 0.013 2.8E-07 49.1 11.0 35 80-115 28-63 (268)
404 cd05288 PGDH Prostaglandin deh 97.0 0.0039 8.5E-08 52.8 8.1 76 81-160 145-223 (329)
405 PRK05597 molybdopterin biosynt 97.0 0.0097 2.1E-07 51.9 10.6 78 80-160 26-127 (355)
406 TIGR01763 MalateDH_bact malate 97.0 0.0056 1.2E-07 52.2 8.9 114 83-202 2-119 (305)
407 cd01080 NAD_bind_m-THF_DH_Cycl 97.0 0.0074 1.6E-07 47.0 8.9 46 78-123 40-85 (168)
408 TIGR02355 moeB molybdopterin s 96.9 0.012 2.7E-07 48.4 10.6 36 80-116 22-58 (240)
409 PRK10537 voltage-gated potassi 96.9 0.0052 1.1E-07 54.2 8.6 71 82-159 240-310 (393)
410 PRK06849 hypothetical protein; 96.9 0.004 8.7E-08 54.7 7.7 39 81-119 3-41 (389)
411 cd01489 Uba2_SUMO Ubiquitin ac 96.9 0.016 3.4E-07 49.6 11.0 74 84-159 1-98 (312)
412 PRK01438 murD UDP-N-acetylmura 96.9 0.0056 1.2E-07 55.2 8.7 76 80-163 14-90 (480)
413 PRK06718 precorrin-2 dehydroge 96.9 0.0037 8E-08 50.1 6.7 38 78-116 6-43 (202)
414 PLN02928 oxidoreductase family 96.8 0.0042 9.1E-08 53.9 7.4 83 78-162 155-237 (347)
415 PF00670 AdoHcyase_NAD: S-aden 96.8 0.0074 1.6E-07 46.6 7.9 43 78-121 19-61 (162)
416 PRK05476 S-adenosyl-L-homocyst 96.8 0.0048 1E-07 54.9 7.7 42 79-121 209-250 (425)
417 cd05188 MDR Medium chain reduc 96.8 0.0032 6.8E-08 51.3 6.2 75 81-161 134-211 (271)
418 cd01485 E1-1_like Ubiquitin ac 96.8 0.023 5E-07 45.4 11.0 35 80-115 17-52 (198)
419 PRK08328 hypothetical protein; 96.8 0.02 4.3E-07 46.9 10.7 36 80-116 25-61 (231)
420 KOG1494 NAD-dependent malate d 96.8 0.0027 5.9E-08 52.9 5.5 105 80-191 26-133 (345)
421 cd08289 MDR_yhfp_like Yhfp put 96.8 0.0063 1.4E-07 51.4 8.0 74 82-160 147-222 (326)
422 cd08230 glucose_DH Glucose deh 96.8 0.0089 1.9E-07 51.6 9.0 73 81-161 172-248 (355)
423 PRK15469 ghrA bifunctional gly 96.8 0.012 2.5E-07 50.5 9.5 70 78-162 132-201 (312)
424 PRK09880 L-idonate 5-dehydroge 96.8 0.0089 1.9E-07 51.4 8.9 74 81-161 169-245 (343)
425 PRK08223 hypothetical protein; 96.8 0.019 4.1E-07 48.5 10.4 36 79-115 24-60 (287)
426 cd05290 LDH_3 A subgroup of L- 96.8 0.028 6E-07 48.0 11.6 98 84-191 1-107 (307)
427 TIGR02824 quinone_pig3 putativ 96.8 0.0069 1.5E-07 50.6 7.9 76 81-161 139-218 (325)
428 cd00401 AdoHcyase S-adenosyl-L 96.7 0.0074 1.6E-07 53.5 8.2 44 79-123 199-242 (413)
429 cd00755 YgdL_like Family of ac 96.7 0.031 6.7E-07 45.8 11.3 35 80-115 9-44 (231)
430 PRK12550 shikimate 5-dehydroge 96.7 0.007 1.5E-07 50.8 7.6 67 82-162 122-189 (272)
431 PRK09424 pntA NAD(P) transhydr 96.7 0.012 2.5E-07 53.7 9.3 79 80-163 163-260 (509)
432 cd08268 MDR2 Medium chain dehy 96.7 0.011 2.4E-07 49.4 8.7 43 81-123 144-186 (328)
433 TIGR01470 cysG_Nterm siroheme 96.7 0.0098 2.1E-07 47.8 7.9 72 79-160 6-78 (205)
434 cd08250 Mgc45594_like Mgc45594 96.7 0.0098 2.1E-07 50.4 8.2 43 81-123 139-181 (329)
435 PRK05600 thiamine biosynthesis 96.6 0.018 3.9E-07 50.4 9.9 80 78-160 37-140 (370)
436 PLN02586 probable cinnamyl alc 96.6 0.0092 2E-07 51.8 8.0 75 81-161 183-257 (360)
437 COG0373 HemA Glutamyl-tRNA red 96.6 0.0081 1.7E-07 53.1 7.6 75 79-163 175-250 (414)
438 PRK07878 molybdopterin biosynt 96.6 0.02 4.4E-07 50.5 10.2 35 80-115 40-75 (392)
439 TIGR02818 adh_III_F_hyde S-(hy 96.6 0.0067 1.5E-07 52.8 7.1 75 81-161 185-265 (368)
440 KOG0023 Alcohol dehydrogenase, 96.6 0.0036 7.9E-08 53.2 5.1 72 81-158 181-257 (360)
441 COG2085 Predicted dinucleotide 96.6 0.0041 9E-08 49.9 5.2 40 83-123 2-42 (211)
442 TIGR02354 thiF_fam2 thiamine b 96.6 0.0087 1.9E-07 47.9 7.0 35 80-115 19-54 (200)
443 PRK06129 3-hydroxyacyl-CoA deh 96.6 0.0033 7.2E-08 53.5 4.9 38 83-121 3-40 (308)
444 PRK07574 formate dehydrogenase 96.6 0.013 2.9E-07 51.5 8.6 72 78-162 188-259 (385)
445 PLN03139 formate dehydrogenase 96.6 0.014 3.1E-07 51.4 8.8 70 78-160 195-264 (386)
446 PLN02494 adenosylhomocysteinas 96.6 0.0092 2E-07 53.6 7.6 39 80-119 252-290 (477)
447 cd08239 THR_DH_like L-threonin 96.6 0.01 2.2E-07 50.6 7.8 75 81-161 163-241 (339)
448 cd08292 ETR_like_2 2-enoyl thi 96.6 0.012 2.6E-07 49.6 8.1 76 81-161 139-218 (324)
449 PTZ00075 Adenosylhomocysteinas 96.5 0.011 2.4E-07 53.1 8.0 41 78-119 250-290 (476)
450 cd01492 Aos1_SUMO Ubiquitin ac 96.5 0.043 9.4E-07 43.8 10.6 35 80-115 19-54 (197)
451 cd05311 NAD_bind_2_malic_enz N 96.5 0.0096 2.1E-07 48.6 6.9 36 79-115 22-60 (226)
452 PF03446 NAD_binding_2: NAD bi 96.5 0.0074 1.6E-07 46.5 6.0 42 82-124 1-42 (163)
453 PRK12480 D-lactate dehydrogena 96.5 0.028 6.1E-07 48.5 10.1 40 78-118 142-181 (330)
454 PLN02178 cinnamyl-alcohol dehy 96.5 0.016 3.5E-07 50.7 8.7 75 81-161 178-252 (375)
455 PF01118 Semialdhyde_dh: Semia 96.5 0.0017 3.7E-08 47.6 2.2 71 84-160 1-75 (121)
456 PRK04308 murD UDP-N-acetylmura 96.5 0.019 4.1E-07 51.4 9.2 75 80-163 3-79 (445)
457 cd01487 E1_ThiF_like E1_ThiF_l 96.5 0.012 2.6E-07 46.0 7.0 73 84-159 1-96 (174)
458 cd01339 LDH-like_MDH L-lactate 96.5 0.01 2.2E-07 50.4 7.0 106 85-201 1-115 (300)
459 PF03807 F420_oxidored: NADP o 96.5 0.01 2.2E-07 41.2 5.9 66 84-160 1-70 (96)
460 cd08270 MDR4 Medium chain dehy 96.4 0.021 4.6E-07 47.7 8.8 44 81-124 132-175 (305)
461 TIGR01296 asd_B aspartate-semi 96.4 0.0049 1.1E-07 53.3 5.1 68 84-161 1-71 (339)
462 PLN02740 Alcohol dehydrogenase 96.4 0.0094 2E-07 52.1 6.9 75 81-161 198-278 (381)
463 TIGR00561 pntA NAD(P) transhyd 96.4 0.058 1.3E-06 49.2 12.0 107 81-205 163-288 (511)
464 cd08243 quinone_oxidoreductase 96.4 0.019 4.1E-07 48.1 8.4 76 81-161 142-218 (320)
465 PF02737 3HCDH_N: 3-hydroxyacy 96.4 0.0079 1.7E-07 47.3 5.7 38 84-122 1-38 (180)
466 PRK14194 bifunctional 5,10-met 96.4 0.015 3.3E-07 49.4 7.6 78 79-162 156-233 (301)
467 TIGR01850 argC N-acetyl-gamma- 96.4 0.011 2.3E-07 51.4 6.9 100 83-205 1-103 (346)
468 COG4982 3-oxoacyl-[acyl-carrie 96.4 0.075 1.6E-06 49.1 12.2 126 78-203 392-555 (866)
469 cd08281 liver_ADH_like1 Zinc-d 96.4 0.015 3.3E-07 50.5 7.7 75 81-161 191-269 (371)
470 PRK07411 hypothetical protein; 96.4 0.036 7.8E-07 48.9 10.0 78 80-160 36-137 (390)
471 cd08244 MDR_enoyl_red Possible 96.4 0.02 4.2E-07 48.2 8.2 76 81-161 142-221 (324)
472 KOG1202 Animal-type fatty acid 96.3 0.0028 6.2E-08 61.8 3.1 127 81-207 1767-1910(2376)
473 TIGR00936 ahcY adenosylhomocys 96.3 0.018 4E-07 51.0 8.0 42 79-121 192-233 (406)
474 cd08238 sorbose_phosphate_red 96.3 0.029 6.4E-07 49.5 9.2 44 81-124 175-221 (410)
475 cd08241 QOR1 Quinone oxidoredu 96.3 0.022 4.9E-07 47.4 8.0 43 81-123 139-181 (323)
476 TIGR03366 HpnZ_proposed putati 96.3 0.019 4E-07 48.0 7.4 75 81-161 120-197 (280)
477 PRK05671 aspartate-semialdehyd 96.3 0.0086 1.9E-07 51.8 5.5 27 82-108 4-30 (336)
478 PRK13256 thiopurine S-methyltr 96.3 0.17 3.6E-06 41.4 12.7 104 82-200 44-162 (226)
479 PF03721 UDPG_MGDP_dh_N: UDP-g 96.3 0.0089 1.9E-07 47.3 5.1 41 83-124 1-41 (185)
480 cd05286 QOR2 Quinone oxidoredu 96.2 0.023 4.9E-07 47.2 7.8 43 81-123 136-178 (320)
481 cd05211 NAD_bind_Glu_Leu_Phe_V 96.2 0.026 5.5E-07 45.8 7.8 77 79-162 20-108 (217)
482 cd05191 NAD_bind_amino_acid_DH 96.2 0.032 6.9E-07 38.2 7.2 36 78-114 19-55 (86)
483 PRK14188 bifunctional 5,10-met 96.2 0.02 4.4E-07 48.6 7.4 78 79-163 155-233 (296)
484 TIGR02817 adh_fam_1 zinc-bindi 96.2 0.022 4.8E-07 48.3 7.6 42 82-123 149-191 (336)
485 cd08301 alcohol_DH_plants Plan 96.1 0.019 4E-07 49.9 7.1 75 81-161 187-267 (369)
486 PRK06719 precorrin-2 dehydroge 96.1 0.034 7.3E-07 42.8 7.7 36 78-114 9-44 (157)
487 PRK14175 bifunctional 5,10-met 96.1 0.042 9.1E-07 46.4 8.8 44 79-122 155-198 (286)
488 PRK07417 arogenate dehydrogena 96.1 0.032 7E-07 46.8 8.2 40 83-123 1-40 (279)
489 cd05280 MDR_yhdh_yhfp Yhdh and 96.1 0.031 6.7E-07 47.0 8.0 42 82-123 147-188 (325)
490 COG1179 Dinucleotide-utilizing 96.1 0.05 1.1E-06 44.6 8.7 108 80-208 28-158 (263)
491 cd08291 ETR_like_1 2-enoyl thi 96.1 0.034 7.4E-07 47.2 8.3 74 83-161 145-222 (324)
492 PRK00141 murD UDP-N-acetylmura 96.1 0.038 8.3E-07 49.9 8.9 76 78-163 11-86 (473)
493 PLN02306 hydroxypyruvate reduc 96.1 0.033 7.2E-07 49.1 8.3 39 78-117 161-200 (386)
494 cd08277 liver_alcohol_DH_like 96.1 0.026 5.7E-07 48.9 7.6 75 81-161 184-264 (365)
495 TIGR03451 mycoS_dep_FDH mycoth 96.0 0.03 6.6E-07 48.4 7.9 75 81-161 176-255 (358)
496 PRK00048 dihydrodipicolinate r 96.0 0.014 3.1E-07 48.4 5.6 36 83-118 2-39 (257)
497 TIGR03840 TMPT_Se_Te thiopurin 96.0 0.27 5.8E-06 39.7 12.8 76 82-163 35-125 (213)
498 PF02882 THF_DHG_CYH_C: Tetrah 96.0 0.034 7.4E-07 42.9 7.2 79 79-163 33-111 (160)
499 PF12242 Eno-Rase_NADH_b: NAD( 96.0 0.014 3E-07 39.1 4.3 32 83-115 40-73 (78)
500 PLN02514 cinnamyl-alcohol dehy 96.0 0.046 9.9E-07 47.3 8.9 75 81-161 180-254 (357)
No 1
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.92 E-value=1.3e-24 Score=175.22 Aligned_cols=129 Identities=18% Similarity=0.189 Sum_probs=110.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
..+|+++|||||+|||.++|++|++.|++|++.+|+.+++++++.++....+..+..|++|.++++.++ ++++|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 456999999999999999999999999999999999999999998886567889999999999977643 67899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+||||||.+...+ .+.++++.++++|+.|..+.++++ +++.++||++||+++..+
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~ 146 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP 146 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc
Confidence 9999999986422 334566788999999999999877 345679999999997653
No 2
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.91 E-value=8.2e-24 Score=174.43 Aligned_cols=132 Identities=17% Similarity=0.216 Sum_probs=111.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++++++|||||+|||+++|++|+++|++|++++|+.+++++++++++ +..++++.+|++|++++++..
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 34578999999999999999999999999999999999999999887776 345788999999999988632
Q ss_pred hCCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 149 FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
...+|+||||||..... ..+|++..+++++|+.+...+++++ +++.++||+|+|.+++.+.
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~ 150 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT 150 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC
Confidence 13699999999998753 3567777889999999999988876 3466899999999997654
No 3
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=2e-23 Score=173.43 Aligned_cols=133 Identities=19% Similarity=0.207 Sum_probs=105.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc----cCCCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+.+|+|+|||||+|||.++|.+|+++|++++++.|...+++.+.++ ....++.++++|++|.+++++++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999988887777665333 22225899999999999998743
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccccCC
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~~~ 210 (214)
++++|+||||||+..... ...++....+++|+.|+..+++++ + .+.++||.+||++++...+
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 789999999999987322 222334567899999999999976 2 2458999999999876443
No 4
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.85 E-value=3.2e-21 Score=170.90 Aligned_cols=149 Identities=23% Similarity=0.275 Sum_probs=123.5
Q ss_pred HHHhhhhhccCCCCCCCCCCCCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC----CCCEE
Q 028043 58 VVHAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD----EETLQ 132 (214)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~ 132 (214)
++|++.+++..... ......++||+|+||||+|.||+++|+++++.+. ++++++|++.++.....++. ..+..
T Consensus 228 ieDLLgR~pV~~d~--~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~ 305 (588)
T COG1086 228 IEDLLGRPPVALDT--ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLR 305 (588)
T ss_pred HHHHhCCCCCCCCH--HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceE
Confidence 68899888765441 1123457899999999999999999999999887 58889999988766544443 36788
Q ss_pred EEEecCCChhccchhhhCC--CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccccC
Q 028043 133 VCKGDTRNPKDLDPAIFEG--VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 133 ~v~~Di~d~~~v~~~~~~~--~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~~ 209 (214)
++.+|++|.+.++.+ +.+ +|+|+|+|+..++|..+ .++.+.+.+|+.||.|+++++ +.+++++|.+||..+.+|.
T Consensus 306 ~~igdVrD~~~~~~~-~~~~kvd~VfHAAA~KHVPl~E-~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~Pt 383 (588)
T COG1086 306 FYIGDVRDRDRVERA-MEGHKVDIVFHAAALKHVPLVE-YNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPT 383 (588)
T ss_pred EEecccccHHHHHHH-HhcCCCceEEEhhhhccCcchh-cCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCc
Confidence 899999999999985 565 99999999999988765 466778899999999999988 5699999999999998876
Q ss_pred C
Q 028043 210 E 210 (214)
Q Consensus 210 ~ 210 (214)
+
T Consensus 384 N 384 (588)
T COG1086 384 N 384 (588)
T ss_pred h
Confidence 5
No 5
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.85 E-value=1.1e-20 Score=159.29 Aligned_cols=126 Identities=29% Similarity=0.422 Sum_probs=104.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH--HhcccC--CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT--LFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+++|+||||+|+||++++++|+++||.|+++.|+++..+. ...+++ ..++..+.+|++|++++.++ +.++|+|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~a-i~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKA-IDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHH-HhCCCEEE
Confidence 57899999999999999999999999999999999887433 223333 34588999999999999985 78899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~~~ 209 (214)
|.|....+...+ ...+..+..+.|+.+++++|+. .++|||++||.++..++
T Consensus 84 H~Asp~~~~~~~--~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~ 136 (327)
T KOG1502|consen 84 HTASPVDFDLED--PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYN 136 (327)
T ss_pred EeCccCCCCCCC--cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccC
Confidence 999987643322 2336789999999999999954 48999999999988654
No 6
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.84 E-value=1.2e-20 Score=156.20 Aligned_cols=131 Identities=15% Similarity=0.112 Sum_probs=108.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+..|++||||||++|+|+++|.+|+++|+++++.|.+.+..++..++... ..+....||++|.+++.+.. .|
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 567899999999999999999999999999999999998887776665542 36889999999999988633 67
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
.+|+||||||+..... ...+..++.+++|+.|+++.++++. ...++||.++|+++.-.
T Consensus 114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g 179 (300)
T KOG1201|consen 114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG 179 (300)
T ss_pred CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC
Confidence 8999999999986322 2334457888999999999999873 35689999999988643
No 7
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.84 E-value=3.3e-20 Score=154.22 Aligned_cols=131 Identities=20% Similarity=0.158 Sum_probs=103.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh-----h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI-----F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~-----~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++. +.++.++.+|++|++++++.+ +
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI 83 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence 34678999999999999999999999999999999999888776654432 346788999999999888643 3
Q ss_pred CCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||..... ....++++..+++|+.+++.+++++ +++.++||++||.++..+
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~ 150 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP 150 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC
Confidence 5799999999975421 1233445667899999998888765 234579999999987643
No 8
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.83 E-value=4.5e-20 Score=157.26 Aligned_cols=130 Identities=19% Similarity=0.183 Sum_probs=103.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++ .+.++.++.+|++|.+++++++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999988776654433 2346788999999999988643
Q ss_pred -hCCCcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||....+. ...+..+..+++|+.|++.+++.+ +.+.++||++||.+...
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~ 155 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARR 155 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcC
Confidence 357999999999875322 233455677899999999888866 23457999999987643
No 9
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.83 E-value=8.2e-20 Score=154.82 Aligned_cols=130 Identities=21% Similarity=0.237 Sum_probs=100.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
+++++|+|+||||+||||++++++|+++|++|++++|+.++.++..+.+ .+..+.++.+|++|.+++++++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 5668899999999999999999999999999999999987765543322 2346788999999999887643
Q ss_pred -hCCCcEEEeccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~-~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||....+. ...+..+..+++|+.|++.+++.+ + .+.++||++||.+++.
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~ 157 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRI 157 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhc
Confidence 357999999999865332 223445667899999977766654 3 2457999999987543
No 10
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.82 E-value=9.3e-20 Score=151.77 Aligned_cols=128 Identities=15% Similarity=0.098 Sum_probs=100.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+.+. .+.++.+|++|++++++++ ++++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG--LVVGGPLDVTDPASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3567899999999999999999999999999999999988876654432 4778999999999876533 4689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|++|||||...... ...+...+.+++|+.|+.++++++ +.+.++||++||.++..+
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 143 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP 143 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC
Confidence 99999999865321 122233556789999999988866 245679999999887643
No 11
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.82 E-value=8.9e-20 Score=152.68 Aligned_cols=130 Identities=15% Similarity=0.087 Sum_probs=102.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|+++.+++..+++. +.++.++.+|++|++++++++ ++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999999887776654443 335778999999999887633 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+.....+++|+.|+.++++++. .+ .++||++||.+++.+
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~ 149 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP 149 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC
Confidence 7999999999864221 1222335567999999999998762 23 478999999987654
No 12
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.82 E-value=1.2e-19 Score=154.21 Aligned_cols=128 Identities=23% Similarity=0.200 Sum_probs=106.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+..+++++||||++|||.++|++|+.+|++|++.+|+.++.++..+.+. ...+.++++|++|.++++++.
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 55678999999999999999999999999999999999987777655443 456788999999999999744
Q ss_pred -hCCCcEEEeccCCCCCCCC-CCCCCCchhHHHHHHHHHHHHHh----cc-CCCeEEEEccccc
Q 028043 149 -FEGVTHVICCTGTTAFPSR-RWDGDNTPEKVDWEGVRNLVSAL----PS-SLKRIVLVSSVGV 205 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~~-~~~~~~~~~~vNv~g~~~l~~a~----~~-~~~~iV~vSS~~~ 205 (214)
..++|++|||||++..+.. ..+..+..+.+|+.|++.+++.+ +. ...|||++||...
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 4589999999999986552 33456788899999999999876 22 2279999999875
No 13
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.1e-19 Score=149.64 Aligned_cols=129 Identities=14% Similarity=0.148 Sum_probs=101.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 34578999999999999999999999999999999999888777654443 345788999999999887643 3
Q ss_pred CCCcEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||.... + ....++....+++|+.++.++++++ +.+.++||++||.+++
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 589999999997532 1 1222344667899999999887765 2345789999998775
No 14
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.6e-19 Score=152.64 Aligned_cols=131 Identities=21% Similarity=0.229 Sum_probs=103.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.++++|+++||||+||||++++++|+++|++|++++|++++++++.+.+. ...+..+.+|++|.+++++++ ++
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999999999988877665553 334566779999999887643 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ..+++.++.+++|+.|+.++++++. +..++||++||.+++.+
T Consensus 85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (296)
T PRK05872 85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA 149 (296)
T ss_pred CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC
Confidence 8999999999864211 2223345678899999999998762 23478999999987654
No 15
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2e-19 Score=151.87 Aligned_cols=131 Identities=17% Similarity=0.249 Sum_probs=102.5
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+.+++|+++||||+||||++++++|+++|++|++++|+.+.++++.+++. +..+.++++|++|.+++++.+
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356778999999999999999999999999999999999988776654432 345778999999999887643
Q ss_pred hCCCcEEEeccCCCCCCCC-----CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~~-----~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||....... .+++....+++|+.|+.++++++ +.+.++||++||.+++.
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 183 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS 183 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence 3589999999998653211 12233456789999999988865 23568999999987653
No 16
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.6e-19 Score=149.24 Aligned_cols=130 Identities=18% Similarity=0.192 Sum_probs=102.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.++..+++. +.++.++++|++|++++++++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999888776655442 345778999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.++.++++++. .+.++||++||..+..+
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 151 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI 151 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC
Confidence 468999999999754211 1223445667899999999998762 34579999999877653
No 17
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.81 E-value=8e-20 Score=151.13 Aligned_cols=123 Identities=19% Similarity=0.194 Sum_probs=101.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag~ 161 (214)
|+||||||+|+||++.+.+|++.|++|+++|.-...-.+.... ....++++|+.|.+.+++.+- .++|.|||.||.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~---~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK---LQFKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh---ccCceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 5799999999999999999999999999999855433222211 115789999999999987432 279999999999
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
..++ +..+++.++++.|+.||..|+++|+ .++++|||-||.++||..
T Consensus 78 ~~Vg-ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p 125 (329)
T COG1087 78 ISVG-ESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEP 125 (329)
T ss_pred cccc-hhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCC
Confidence 8754 4456788899999999999999995 589999999999999854
No 18
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.81 E-value=2.3e-19 Score=153.56 Aligned_cols=126 Identities=23% Similarity=0.325 Sum_probs=100.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+++|+|+||||+|+||++++++|+++| ++|++++|+......+.......++.++.+|++|.+.+.+ +++++|+|||
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-~~~~iD~Vih 80 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTR-ALRGVDYVVH 80 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHH-HHhcCCEEEE
Confidence 367899999999999999999999986 7899999987655444333333468899999999999987 4678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
+||....+.. ..++.+.+++|+.|+.+++++++ .+.++||++||.....
T Consensus 81 ~Ag~~~~~~~-~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~ 130 (324)
T TIGR03589 81 AAALKQVPAA-EYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAAN 130 (324)
T ss_pred CcccCCCchh-hcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC
Confidence 9997653322 22345678999999999999985 4678999999976543
No 19
>PRK05717 oxidoreductase; Validated
Probab=99.81 E-value=2.2e-19 Score=148.11 Aligned_cols=130 Identities=17% Similarity=0.194 Sum_probs=102.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.++.+++.+.. +..+.++++|++|.+++++++ +++
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5577899999999999999999999999999999999887766654433 345788999999999886532 457
Q ss_pred CcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... .+.+++...+++|+.|+.++++++. ...++||++||.+++.+
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~ 150 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS 150 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC
Confidence 999999999864211 1223345678999999999999873 23478999999887653
No 20
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.6e-19 Score=155.03 Aligned_cols=130 Identities=15% Similarity=0.143 Sum_probs=103.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+.+|+++||||+||||++++++|+++|++|++++|++++++++.+++. +..+.++.+|++|++++++++ ++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4567999999999999999999999999999999999988877655443 345778899999999988743 36
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|++|||||...... ...++..+.+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~ 149 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA 149 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC
Confidence 8999999999865322 122233556899999999988865 234579999999887643
No 21
>PRK06194 hypothetical protein; Provisional
Probab=99.81 E-value=1.5e-19 Score=151.41 Aligned_cols=129 Identities=15% Similarity=0.077 Sum_probs=99.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|++|||||+||||++++++|+++|++|++++|+.+.+++..+++. +.++.++.+|++|.+++++++ +++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999999999877666544432 345778999999999887643 347
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCC------CeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSL------KRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~------~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++....+++|+.|+.++++++ . ... ++||++||.+++.+
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 154 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA 154 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC
Confidence 999999999865321 122334556789999999988764 2 222 68999999987654
No 22
>PLN02253 xanthoxin dehydrogenase
Probab=99.81 E-value=2.8e-19 Score=149.44 Aligned_cols=130 Identities=18% Similarity=0.191 Sum_probs=101.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
..+++|+++||||+||||++++++|+++|++|++++|+++..+++.+.+. ..++.++++|++|++++++++ ++
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999999999999998877666554443 246888999999999987643 35
Q ss_pred CCcEEEeccCCCCCC-----CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~-----~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||..... ..++++.+..+++|+.|+.++++++. ...++||++||.++..
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 160 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI 160 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc
Confidence 799999999975421 12233456778999999999988762 2446899999987643
No 23
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.81 E-value=1.3e-19 Score=156.49 Aligned_cols=128 Identities=16% Similarity=0.137 Sum_probs=99.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH----HHHHhccc---CCCCEEEEEecCCChhccchhhhCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~----~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~~ 151 (214)
.+++|+|+||||+|+||++++++|+++|++|++++|.... ........ ...++.++.+|++|.+.+.+ ++.+
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~-~~~~ 90 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK-ACKN 90 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH-HhhC
Confidence 3567899999999999999999999999999999986432 11111111 11357889999999988886 4678
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+|||+|+....+ ....++...+++|+.|+.+++++++ .+.+++|++||.++|+.
T Consensus 91 ~d~ViHlAa~~~~~-~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~ 147 (348)
T PRK15181 91 VDYVLHQAALGSVP-RSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGD 147 (348)
T ss_pred CCEEEECccccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCC
Confidence 99999999976532 2233455678999999999999985 47889999999999874
No 24
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.6e-19 Score=153.95 Aligned_cols=131 Identities=18% Similarity=0.173 Sum_probs=103.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 34567999999999999999999999999999999999988776654432 346788999999999988643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... ...++.+..+++|+.|+.++++++ + .+.++||++||.+++.+
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~ 150 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS 150 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC
Confidence 68999999999764321 222344567799999988877655 2 34579999999988754
No 25
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.1e-19 Score=149.21 Aligned_cols=127 Identities=16% Similarity=0.127 Sum_probs=99.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|++++.+.+.+.. ..++..+.+|++|++++.+.+ ++++|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999999999999999999998876654432 345788999999999887633 357999
Q ss_pred EEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
||||||....... ..+...+.+++|+.|+.++++++ +.+.++||++||.++..+
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~ 143 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT 143 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC
Confidence 9999998653221 11223456799999999999975 234579999999877643
No 26
>PRK06196 oxidoreductase; Provisional
Probab=99.81 E-value=2.5e-19 Score=152.59 Aligned_cols=126 Identities=24% Similarity=0.251 Sum_probs=99.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+|+||||+||||++++++|+++|++|++++|++++.++..+.+. ++.++++|++|.+++++++ ++++
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~--~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID--GVEVVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--hCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 3568999999999999999999999999999999999888776554432 3778999999999987643 3579
Q ss_pred cEEEeccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~-~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~ 206 (214)
|+||||||....+. ...+..+..+++|+.|+..+++++ + .+.++||++||.+..
T Consensus 101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 160 (315)
T PRK06196 101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHR 160 (315)
T ss_pred CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhc
Confidence 99999999865322 222344667899999988888755 2 344799999998653
No 27
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.1e-19 Score=148.00 Aligned_cols=127 Identities=16% Similarity=0.156 Sum_probs=101.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++|+++||||+||||++++++|+++|++|++++|++++++++.+++ +.++.++++|++|++++++.+ ++++|
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDITDDAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 56799999999999999999999999999999999988777665544 346788999999999887633 46899
Q ss_pred EEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
+||||||...... ..+++..+.+++|+.++.++++++. +..++||++||.++..
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 142 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF 142 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc
Confidence 9999999754211 2233445677899999999998763 3347899999987654
No 28
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.81 E-value=3.9e-19 Score=151.55 Aligned_cols=124 Identities=24% Similarity=0.302 Sum_probs=96.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
..+|+|+||||+|+||++++++|+++|++|+++.|+.+..+...... ...+++++.+|++|.+.+++ ++.++|+|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~v 81 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQ-AIEGCDAV 81 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHH-HHhCCCEE
Confidence 35789999999999999999999999999999999875433221111 12468889999999998886 46789999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVT 206 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~ 206 (214)
||+||..... ..+...+.+++|+.|+.++++++++ ++++||++||.+++
T Consensus 82 ih~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~ 132 (322)
T PLN02986 82 FHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAV 132 (322)
T ss_pred EEeCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhhe
Confidence 9999975321 1122234678999999999999853 57899999998865
No 29
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.81 E-value=3.5e-19 Score=152.04 Aligned_cols=127 Identities=17% Similarity=0.192 Sum_probs=99.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+|+++||||+||||++++++|+++|++|++++|+.++.+++.+++. ...+.++.+|++|.+++++++ .++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 467999999999999999999999999999999999888776655442 346788999999999988643 236
Q ss_pred CcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc----c-C--CCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP----S-S--LKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~----~-~--~~~iV~vSS~~~~ 206 (214)
+|+||||||+.... ....+..+..+++|+.|++++++++. + + .++||++||.+.+
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~ 149 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTAN 149 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccC
Confidence 99999999975421 12223446678999999999988762 1 2 2599999998654
No 30
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.81 E-value=2.9e-19 Score=147.58 Aligned_cols=134 Identities=18% Similarity=0.178 Sum_probs=99.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|++. .+++.+++. +.++.++.+|++|.+++++.+ ++
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999999853 223322221 345778999999998877633 45
Q ss_pred CCcEEEeccCCCCC--CC--CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccCCCCC
Q 028043 151 GVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPW 213 (214)
Q Consensus 151 ~~d~li~~Ag~~~~--~~--~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~~~p~ 213 (214)
++|+||||||.... +. ...++..+.+++|+.++.++++++ +.+.++||++||.++++....+|
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y 155 (260)
T PRK12823 84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPY 155 (260)
T ss_pred CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCcc
Confidence 79999999996421 11 222334566789999998877755 23557999999998876554555
No 31
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.1e-19 Score=147.46 Aligned_cols=127 Identities=16% Similarity=0.175 Sum_probs=99.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhh------hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
+|+++||||+||||++++++|+++|++|++++|+.+++++..+++... ++.++.+|++|++++++++ ++.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 479999999999999999999999999999999998877765544322 6888999999999887643 346899
Q ss_pred EEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|||||...... .++++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~ 144 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG 144 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC
Confidence 999999864211 122334567799999999988754 235579999999877643
No 32
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.80 E-value=3.7e-19 Score=146.66 Aligned_cols=130 Identities=17% Similarity=0.136 Sum_probs=101.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++.+|+++||||+|+||++++++|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++++++ +
T Consensus 6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999887766544443 235778999999999888643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||...... ...+..++.+++|+.++.++++++. .+.++||++||..+..
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 151 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL 151 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc
Confidence 57999999999864221 1222335567899999999999773 2467999999987644
No 33
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.6e-19 Score=148.79 Aligned_cols=122 Identities=18% Similarity=0.194 Sum_probs=97.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|++++.+. ..+++++++|++|++++++++ ++++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 46799999999999999999999999999999998766543 235788999999999988743 457999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
||||||...... ..+++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 138 (270)
T PRK06179 77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP 138 (270)
T ss_pred EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC
Confidence 999999865322 222334667899999999999875 246789999999877543
No 34
>PRK06182 short chain dehydrogenase; Validated
Probab=99.80 E-value=3.4e-19 Score=148.46 Aligned_cols=123 Identities=19% Similarity=0.222 Sum_probs=97.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|++++++++.. .+++++.+|++|++++++.+ ++++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 46899999999999999999999999999999999988766542 35788999999999987643 358999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
||||||...... ..+++.+..+++|+.|+..+++++ + .+.++||++||.++..
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 138 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI 138 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC
Confidence 999999865321 223345667799999987777654 2 3567999999987643
No 35
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.80 E-value=8.9e-19 Score=157.94 Aligned_cols=125 Identities=27% Similarity=0.494 Sum_probs=101.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----------CCCEEEEEecCCChhccch
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----------EETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~v~~Di~d~~~v~~ 146 (214)
....+|+|+||||+||||++++++|+++|++|++++|+.++++.+.+.+. ..+++++.+|++|.+++++
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 44578999999999999999999999999999999999988766543221 1357889999999999986
Q ss_pred hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
.++++|+||||+|.... ...+....+++|+.|+.+++++++ .+.++||++||.++.
T Consensus 156 -aLggiDiVVn~AG~~~~---~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 156 -ALGNASVVICCIGASEK---EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred -HhcCCCEEEEccccccc---cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 47899999999997531 112334567899999999999985 478899999998764
No 36
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=2.9e-19 Score=140.29 Aligned_cols=128 Identities=14% Similarity=0.146 Sum_probs=102.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.++|.+||||||++|||++++++|.+.|-+|++++|+++++++.+.+ .+.+....||+.|.++.++.+ +..+
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~--~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE--NPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc--CcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 45788999999999999999999999999999999999999988765 356778999999999877633 5589
Q ss_pred cEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++||||||++...+ ...+...+...+|+.++.+++.++ ++....||+|||.-++-+
T Consensus 80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP 145 (245)
T COG3967 80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP 145 (245)
T ss_pred heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc
Confidence 99999999986322 111222445688999999988876 234568999999877654
No 37
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.80 E-value=3.5e-19 Score=146.91 Aligned_cols=130 Identities=13% Similarity=0.080 Sum_probs=98.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+.+.+|+++||||++|||++++++|+++|++|++++|+... ..+..+.. +.++.++.+|++|++++++++ ++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999999886532 22212111 346788999999999988743 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
++|++|||||...... ...+++++.+++|+.|+..+++++. ++ .++||++||.+++.+
T Consensus 83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~ 149 (251)
T PRK12481 83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG 149 (251)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC
Confidence 8999999999864221 2234456678999999999888662 22 469999999887653
No 38
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.80 E-value=4.3e-19 Score=147.07 Aligned_cols=130 Identities=22% Similarity=0.250 Sum_probs=100.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
++++|+++||||+||||++++++|+++|++|++++|+++++++..+++. +.++..+.+|++|.+++++++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999887766543332 236778999999999887633
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++..+.+++|+.++..+++++ + .+.++||++||.++..+
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP 152 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC
Confidence 468999999999754211 122234566789999998888765 2 24579999999887653
No 39
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.80 E-value=4.6e-19 Score=151.19 Aligned_cols=125 Identities=23% Similarity=0.298 Sum_probs=97.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---C-CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---D-EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+|+++||||+|+||++++++|+++|++|++++|+.+..+...... . ..+++++.+|++|.+++++ ++.++|+||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFEL-AIDGCETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHH-HHcCCCEEE
Confidence 4689999999999999999999999999999988876443321111 1 2468889999999999886 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~ 207 (214)
||||.... ....+.....+++|+.|+.++++++.+ +.++||++||.++++
T Consensus 83 h~A~~~~~-~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~ 134 (325)
T PLN02989 83 HTASPVAI-TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVL 134 (325)
T ss_pred EeCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhee
Confidence 99997542 222234456779999999999998843 457999999988764
No 40
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.80 E-value=2.6e-19 Score=147.87 Aligned_cols=129 Identities=10% Similarity=0.099 Sum_probs=97.9
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+ +|||++++++|+++|++|++++|+. +.++..+++....+.++++|++|++++++++ +
T Consensus 3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 34678999999999 7999999999999999999999984 3333333333346778999999999988633 4
Q ss_pred CCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||.... + ....++.+..+++|+.|+..+++++.+ ..++||++||.++..
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~ 149 (252)
T PRK06079 82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER 149 (252)
T ss_pred CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc
Confidence 689999999997642 1 122233456678999999999987732 236899999987654
No 41
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.80 E-value=5.4e-19 Score=150.28 Aligned_cols=121 Identities=23% Similarity=0.310 Sum_probs=94.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc--cC--CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK--QD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++|+|+||||+|+||++++++|+++|++|++++|+.+........ .. ..+++++++|++|++.+++ ++.++|+||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vi 81 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDS-VVDGCEGVF 81 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHH-HHcCCCEEE
Confidence 468999999999999999999999999999999986543221110 11 2467899999999998886 478899999
Q ss_pred eccCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHhc-c-CCCeEEEEccccc
Q 028043 157 CCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGV 205 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~-~~~~~vNv~g~~~l~~a~~-~-~~~~iV~vSS~~~ 205 (214)
|+||.... ...++ ...+++|+.|+.+++++++ . +.++||++||.++
T Consensus 82 h~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~ 130 (322)
T PLN02662 82 HTASPFYH---DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAA 130 (322)
T ss_pred EeCCcccC---CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHH
Confidence 99997531 11223 3577999999999999884 3 6789999999874
No 42
>PRK08589 short chain dehydrogenase; Validated
Probab=99.80 E-value=5e-19 Score=147.67 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||++|||++++++|+++|++|++++|+ +++++..+++. +.++..+.+|++|++++++++ +++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999999 55555444332 345788999999999887633 467
Q ss_pred CcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+...+.+++|+.|+..+++++ ++..++||++||.+++.+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 147 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAA 147 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCC
Confidence 999999999864211 122233556789999999888876 223379999999887653
No 43
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.80 E-value=4.1e-19 Score=146.30 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=101.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+|+++||||+||||++++++|+++|++|++++|+++..+++.+++. +.++.++.+|++|++++++++ +++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999999999999887766655443 346788999999999887633 468
Q ss_pred CcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||..... ..+.++....+++|+.|+..+++++. ...++||++||..+..+
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~ 147 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS 147 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC
Confidence 99999999975321 12233446678999999999999873 23468999999887654
No 44
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.79 E-value=7.4e-19 Score=145.24 Aligned_cols=126 Identities=13% Similarity=0.097 Sum_probs=101.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~~~~d~ 154 (214)
+|+++||||+||||++++++|+++|++|++++|+++.++++.+...+.++.++++|++|.+++++.+ .+++|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 4789999999999999999999999999999999988877765554557889999999999887632 346899
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
||||||...... ..+++.+..+++|+.|+.++++++. .+.++||++||.++..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 141 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY 141 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc
Confidence 999999865321 2223346678999999999988762 3457999999986643
No 45
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.79 E-value=5.4e-19 Score=145.63 Aligned_cols=128 Identities=14% Similarity=0.183 Sum_probs=100.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.++.+++.+++. +.++..+.+|++|++++++++ ++
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999999999999999888777655443 345778999999999887643 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVT 206 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~ 206 (214)
++|+||||||...... ...+...+.+++|+.++..+++++. ++ .++||++||.++.
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 150 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH 150 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc
Confidence 8999999999864321 1223345567899999999998762 22 3579999998764
No 46
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.79 E-value=7e-19 Score=147.32 Aligned_cols=127 Identities=10% Similarity=0.116 Sum_probs=95.9
Q ss_pred CCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+++|+++||||+ +|||++++++|++.|++|++++|+.. .++++.+++. .. ..+++|++|.+++++++
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence 3568999999997 89999999999999999999999853 3344433332 23 57899999999988643
Q ss_pred -hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||.... + ....++.++.+++|+.|++++++++.+ ..++||++||.++..
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~ 149 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK 149 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc
Confidence 5689999999997531 1 122233466789999999999987732 236899999987654
No 47
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.79 E-value=8.1e-19 Score=146.74 Aligned_cols=124 Identities=17% Similarity=0.156 Sum_probs=96.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h-CCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F-EGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~-~~~d 153 (214)
++|+++||||+||||++++++|+++|++|++++|+++.++++.+ .+++++.+|++|.+++++++ + +++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 46899999999999999999999999999999999988776643 35778999999998877633 1 4799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHH----hc-cCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSA----LP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a----~~-~~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...+.....+++|+.|+.+++++ ++ .+.++||++||..++.+
T Consensus 79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~ 141 (277)
T PRK05993 79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP 141 (277)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC
Confidence 9999999865322 11123355679999996665554 33 45689999999877543
No 48
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.79 E-value=1.4e-18 Score=144.02 Aligned_cols=129 Identities=18% Similarity=0.220 Sum_probs=99.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.+.++++.+.. +.++..+++|++|.+++++++ ++++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 356899999999999999999999999999999999988777765432 345788999999998877633 4689
Q ss_pred cEEEeccCCCCC--CC--CCC----CCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAF--PS--RRW----DGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~--~~--~~~----~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||.... +. ... +..++.+++|+.|+.++++++. +..+++|++||..++.+
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~ 148 (262)
T TIGR03325 81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP 148 (262)
T ss_pred CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC
Confidence 999999997431 11 111 1245678999999999999772 23368999999877643
No 49
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.79 E-value=9.4e-20 Score=152.13 Aligned_cols=124 Identities=26% Similarity=0.329 Sum_probs=93.4
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhccc----CCCCEE----EEEecCCChhccchhhhC--CCc
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ----DEETLQ----VCKGDTRNPKDLDPAIFE--GVT 153 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~----~~~~~~----~v~~Di~d~~~v~~~~~~--~~d 153 (214)
||||||+|.||++++++|++.+. ++++++|++..+-++..++ ...++. .+.+|++|.+.+.+ ++. ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~-~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNR-IFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHH-HTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHH-HHhhcCCC
Confidence 79999999999999999999986 6999999999987776655 233343 35789999999997 466 899
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccccCC
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~~~ 210 (214)
+|+|.|+..++|..+ .++.+..++|+.||.++++++ +.+++++|++||..+..|.+
T Consensus 80 iVfHaAA~KhVpl~E-~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Ptn 136 (293)
T PF02719_consen 80 IVFHAAALKHVPLME-DNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTN 136 (293)
T ss_dssp EEEE------HHHHC-CCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--S
T ss_pred EEEEChhcCCCChHH-hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCc
Confidence 999999999977655 467778999999999999988 56899999999999977654
No 50
>PRK06398 aldose dehydrogenase; Validated
Probab=99.79 E-value=6.9e-19 Score=145.73 Aligned_cols=121 Identities=17% Similarity=0.184 Sum_probs=96.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++++|+++||||+||||++++++|+++|++|++++|+.... .++.++++|++|++++++++ ++++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999999986432 24778999999999887643 4579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++..+.+++|+.|+..+++++. .+.++||++||.+++.+
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 137 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV 137 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC
Confidence 99999999864221 1223345567999999999988762 34579999999987654
No 51
>PLN02427 UDP-apiose/xylose synthase
Probab=99.79 E-value=8.5e-19 Score=153.24 Aligned_cols=127 Identities=13% Similarity=0.069 Sum_probs=99.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+.|+|+||||+|+||++++++|+++ |++|++++|+.++.+.+.... ...+++++.+|++|.+.+++ ++.++|+|
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~-~~~~~d~V 90 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG-LIKMADLT 90 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH-HhhcCCEE
Confidence 45578999999999999999999998 599999999876655443211 12368899999999999887 46789999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
||+|+..... ....++.+.+..|+.|+.++++++++..+++|++||..+|+.
T Consensus 91 iHlAa~~~~~-~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~ 142 (386)
T PLN02427 91 INLAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 142 (386)
T ss_pred EEcccccChh-hhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCC
Confidence 9999975421 112233445678999999999998654489999999998874
No 52
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.79 E-value=7.5e-19 Score=145.55 Aligned_cols=129 Identities=19% Similarity=0.213 Sum_probs=100.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+.. ..++.++++|++|++++++++ ++++
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 356899999999999999999999999999999999988877765544 345778999999999887633 4589
Q ss_pred cEEEeccCCCCC--C--CCCCCC----CCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAF--P--SRRWDG----DNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~--~--~~~~~~----~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||+... + ...+++ +++.+++|+.++..+++++. ...++||++||.+++.+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 149 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYP 149 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCC
Confidence 999999997531 1 111121 34567899999999988763 23468999999987654
No 53
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=9.5e-19 Score=143.28 Aligned_cols=130 Identities=18% Similarity=0.142 Sum_probs=101.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+.+|+++||||+|+||++++++|+++|++|++++|++++.+++...+. +.++.++++|++|++++++++ ++++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 567899999999999999999999999999999999887766544332 345788999999999998643 3579
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~~ 209 (214)
|+||||||...... ...+...+.+++|+.|+.++++.+. .+.++||++||..++.+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 148 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR 148 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC
Confidence 99999999754211 1223345567899999988888662 356789999999886643
No 54
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.1e-18 Score=145.51 Aligned_cols=125 Identities=22% Similarity=0.247 Sum_probs=99.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
.|+++||||+||||++++++|+++|++|++++|+++..+++.+.. ..++.++.+|++|.+++++.+ ++++|+|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 478999999999999999999999999999999998877665443 346888999999999887643 3579999
Q ss_pred EeccCCCCCCC-C--CCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS-R--RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~-~--~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
|||||...... . .+++....+++|+.|+.++++++ + .+.++||++||.++..
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 140 (276)
T PRK06482 81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI 140 (276)
T ss_pred EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc
Confidence 99999875322 1 12233556789999999999986 2 3567999999987643
No 55
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1e-18 Score=145.81 Aligned_cols=127 Identities=19% Similarity=0.190 Sum_probs=101.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|+++.++++.+.. ...+.++++|++|++++++.+ ++++|+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999999999999999999999999999988877665443 345778899999999887633 357999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|||||...... ..+++..+.+++|+.++.++++++ +.+.++||++||.+++.+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~ 142 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA 142 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC
Confidence 999999865321 223345667899999999888875 235679999999887654
No 56
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.3e-18 Score=142.69 Aligned_cols=126 Identities=16% Similarity=0.226 Sum_probs=98.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+|+++||||+||||++++++|+++|++|++++|++++.+++...+. +.+++++.+|++|++++++++ +++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999999999999887766543322 346788999999999887633 468
Q ss_pred CcEEEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+|++|||||+...... .++.....+++|+.|+.++++++ +.+.++||++||..+..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 145 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVR 145 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence 9999999998653221 12233456789999999988876 23567999999987654
No 57
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.79 E-value=9.1e-19 Score=143.58 Aligned_cols=130 Identities=18% Similarity=0.184 Sum_probs=100.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|+++..+++.+.+. ..++.++.+|++|.+++++.. ++
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG 82 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3567999999999999999999999999999999999876655443332 235678899999999877632 35
Q ss_pred CCcEEEeccCCCCCC------CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~------~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||..... ...++...+.+++|+.++.++++++. .+.++||++||.+++.+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 151 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY 151 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC
Confidence 799999999985421 12233345567899999999998773 24579999999887653
No 58
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.79 E-value=9.6e-19 Score=150.93 Aligned_cols=127 Identities=23% Similarity=0.236 Sum_probs=98.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhC-CCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE-GVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~ 158 (214)
++|+|+||||+|+||++++++|+++|++|++++|+............ ..++.++.+|++|.+++.+.+-+ ++|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 57899999999999999999999999999999998754333221111 23567789999999998874322 58999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS~~~~~~ 208 (214)
||.... ....+++...+++|+.|+.+++++++. + .+++|++||..+|+.
T Consensus 83 A~~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~ 133 (349)
T TIGR02622 83 AAQPLV-RKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRN 133 (349)
T ss_pred Cccccc-ccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCC
Confidence 996542 233345567789999999999998854 3 679999999988763
No 59
>PRK09186 flagellin modification protein A; Provisional
Probab=99.79 E-value=8.4e-19 Score=144.27 Aligned_cols=128 Identities=15% Similarity=0.143 Sum_probs=96.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++|+++||||+||||++++++|+++|++|++++|++++.+++.+.+ ....+.++++|++|++++++++ +
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999999999999999988776654433 1234667799999999887643 3
Q ss_pred CCCcEEEeccCCCCC------CCCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAF------PSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~------~~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||.... ...+++.....+++|+.++..+++++ +.+.++||++||.+++.
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV 150 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc
Confidence 469999999975421 11222334556788999988887765 23567999999987653
No 60
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1e-18 Score=144.08 Aligned_cols=130 Identities=15% Similarity=0.133 Sum_probs=99.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.++++|+++||||+||||++++++|+++|++|++++|+.+ ..++..+.+. +.++..+++|++|++++++++
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 83 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE 83 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999754 3344333222 345778999999999887633
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...++.++.+++|+.|+..+++++ +.+.++||++||.++..
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 150 (254)
T PRK06114 84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGII 150 (254)
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcC
Confidence 467999999999865321 223344667789999999888865 23457999999988754
No 61
>PLN02650 dihydroflavonol-4-reductase
Probab=99.78 E-value=1.8e-18 Score=149.25 Aligned_cols=124 Identities=27% Similarity=0.369 Sum_probs=96.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..|+||||||+|+||++++++|+++|++|++++|+.+..+.+..... ..+++++.+|++|.+.+++ ++.++|+||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~-~~~~~d~Vi 82 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDD-AIRGCTGVF 82 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHH-HHhCCCEEE
Confidence 35799999999999999999999999999999998765544322111 1257889999999998886 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS~~~~~ 207 (214)
|+|+..... ..+.....+++|+.|+.++++++.+ + .++||++||.++++
T Consensus 83 H~A~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~ 133 (351)
T PLN02650 83 HVATPMDFE--SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVN 133 (351)
T ss_pred EeCCCCCCC--CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcc
Confidence 999865321 1122235679999999999999854 4 67999999987664
No 62
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.78 E-value=4.5e-19 Score=149.00 Aligned_cols=118 Identities=31% Similarity=0.392 Sum_probs=94.1
Q ss_pred EEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHH-HHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 86 LVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 86 lITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~-~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|||||+|+||++|+++|+++| ++|.++++++.... ..... ....+++.+|++|++++.++ +.++|+|||+|+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~l~~a-~~g~d~V~H~Aa~~ 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK--SGVKEYIQGDITDPESLEEA-LEGVDVVFHTAAPV 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc--ccceeEEEeccccHHHHHHH-hcCCceEEEeCccc
Confidence 699999999999999999999 78999998765422 11111 12234899999999999974 78999999999976
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEcccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~ 208 (214)
.... ....+.++++|+.||.+++++| +.+++++||+||.++++.
T Consensus 78 ~~~~--~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~ 122 (280)
T PF01073_consen 78 PPWG--DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFD 122 (280)
T ss_pred cccC--cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEe
Confidence 5321 1234567899999999999999 458999999999998765
No 63
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.2e-18 Score=142.81 Aligned_cols=129 Identities=13% Similarity=0.117 Sum_probs=99.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++++|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+. +.++.++++|++|++++++++ +++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999999877665444332 345788999999999988643 358
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ...+.....+++|+.++.++++++ +.+.++||++||..+..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~ 145 (252)
T PRK06138 82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA 145 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc
Confidence 999999999864211 112223445789999998887765 23567999999986643
No 64
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.78 E-value=9.2e-19 Score=150.62 Aligned_cols=124 Identities=16% Similarity=0.262 Sum_probs=95.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-----HHHHHhccc---CCCCEEEEEecCCChhccchhhhC--CC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-----KATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE--GV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-----~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~--~~ 152 (214)
|+||||||+|+||++++++|+++|++|++++|+.+ ..+.+.+.. ...+++++.+|++|.+.+.++ +. ++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~-~~~~~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI-IDEIKP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH-HHhCCC
Confidence 68999999999999999999999999999999753 222222111 124588999999999998874 44 58
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC---CeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL---KRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~---~~iV~vSS~~~~~~ 208 (214)
|+|||+|+..... ...+......++|+.|+.++++++++ +. .++|++||.++|+.
T Consensus 80 d~ViH~Aa~~~~~-~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~ 138 (343)
T TIGR01472 80 TEIYNLAAQSHVK-VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGK 138 (343)
T ss_pred CEEEECCcccccc-hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCC
Confidence 9999999986532 22233445668899999999999854 54 38999999999874
No 65
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.78 E-value=1.6e-18 Score=142.78 Aligned_cols=129 Identities=16% Similarity=0.129 Sum_probs=100.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+.+|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++..+.+|++|++++++.+ +
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 34678999999999999999999999999999999999887766554443 335678899999999888643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||...... ...+++++.+++|+.|+..+++++. .+.++||++||..+.
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE 149 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc
Confidence 57999999999754211 2223345678999999999988762 345799999998654
No 66
>PRK09242 tropinone reductase; Provisional
Probab=99.78 E-value=1.5e-18 Score=143.23 Aligned_cols=131 Identities=15% Similarity=0.142 Sum_probs=102.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+.+|+++||||+||||++++++|+++|++|++++|+.+..+++.+++. +.++.++.+|++|++++++++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999887766554432 346788999999998876533
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~ 153 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH 153 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC
Confidence 568999999999854211 2233456678999999999988762 34579999999887654
No 67
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.5e-18 Score=142.90 Aligned_cols=125 Identities=16% Similarity=0.201 Sum_probs=97.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.+. . ..+.++.++++|++|++++++.+ +++
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--T----VDGRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--h----hcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34678999999999999999999999999999999998765 1 11346788999999999887643 357
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc------CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~------~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+...+.+++|+.|+.++++++.+ +.++||++||.++..+
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~ 141 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP 141 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC
Confidence 899999999764221 12223456779999999999987621 3478999999987654
No 68
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.4e-18 Score=142.96 Aligned_cols=126 Identities=18% Similarity=0.116 Sum_probs=96.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+|+++||||+||||++++++|+++|++|++++|+++..+++.+... +.++.++.+|++|+++++++..+++|+|||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 5799999999999999999999999999999999876655433221 34578899999999999875444899999999
Q ss_pred CCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 160 GTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 160 g~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
|...... ...+.....+++|+.|+.++++++ +.+.++||++||.++..
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~ 137 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI 137 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc
Confidence 9865221 111223456788999988877654 23558999999987643
No 69
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.78 E-value=1.5e-18 Score=149.12 Aligned_cols=130 Identities=14% Similarity=0.192 Sum_probs=98.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-----HHHHhccc--CCCCEEEEEecCCChhccchhhhC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
.+.++|+||||||+|+||++++++|+++|++|++++|+.+. ++.+.... ...+++++.+|++|.++++++ +.
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~ 80 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRW-LD 80 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHH-HH
Confidence 34568999999999999999999999999999999987542 22221111 123578899999999998864 43
Q ss_pred --CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-----eEEEEccccccccC
Q 028043 151 --GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-----RIVLVSSVGVTKFN 209 (214)
Q Consensus 151 --~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-----~iV~vSS~~~~~~~ 209 (214)
++|+|||+||..... ...+.+...+++|+.|+.++++++++ +.+ ++|++||.++|+..
T Consensus 81 ~~~~d~Vih~A~~~~~~-~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~ 146 (340)
T PLN02653 81 DIKPDEVYNLAAQSHVA-VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST 146 (340)
T ss_pred HcCCCEEEECCcccchh-hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC
Confidence 589999999986532 22234556678999999999998853 433 89999999888754
No 70
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.78 E-value=1.6e-18 Score=142.89 Aligned_cols=128 Identities=13% Similarity=0.166 Sum_probs=97.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||+|+||++++++|+++|++|++++|++++.++..+.+. +..+.++++|++|.+++++++ +++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999999877666544432 345778999999999887633 356
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHH----Hh-c-cCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVS----AL-P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~----a~-~-~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ..++.....+++|+.++..+++ ++ + .+.++||++||..+..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~ 149 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE 149 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC
Confidence 999999999864221 1223345567899999655554 44 3 3568999999986654
No 71
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.78 E-value=2.5e-18 Score=146.60 Aligned_cols=113 Identities=28% Similarity=0.475 Sum_probs=93.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||||+||++++++|+++|++|++++|+.++...+. ..+++++.+|++|++++.+ .+.++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~-al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EWGAELVYGDLSLPETLPP-SFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hcCCEEEECCCCCHHHHHH-HHCCCCEEEECCCCC
Confidence 47999999999999999999999999999999976554332 2468899999999999986 478899999998643
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
. .+.....++|+.|+.+++++++ .+++++|++||.++.
T Consensus 76 ~------~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~ 114 (317)
T CHL00194 76 P------SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE 114 (317)
T ss_pred C------CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc
Confidence 2 2334467899999999999985 588999999997554
No 72
>PLN02214 cinnamoyl-CoA reductase
Probab=99.78 E-value=2.5e-18 Score=148.16 Aligned_cols=121 Identities=24% Similarity=0.415 Sum_probs=96.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH-hcccC--CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-FGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.++|+|+||||+|+||++++++|+++|++|++++|+.+..... ...+. ..+++++.+|++|.+++.+ ++.++|+||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKA-AIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHH-HHhcCCEEE
Confidence 4678999999999999999999999999999999986543211 11111 2357889999999999886 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccc-ccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVG-VTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~-~~~ 207 (214)
|+||... .+....+++|+.|+.+++++++ .+.++||++||.+ .|+
T Consensus 87 h~A~~~~------~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg 133 (342)
T PLN02214 87 HTASPVT------DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYM 133 (342)
T ss_pred EecCCCC------CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeec
Confidence 9999642 2345678999999999999984 5778999999974 554
No 73
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.78 E-value=1.5e-18 Score=147.92 Aligned_cols=126 Identities=17% Similarity=0.177 Sum_probs=98.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++|+++||||++|||++++++|+++| ++|++++|+.++.+++.+++. +..+.++.+|++|.+++++++ +++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999 999999999888776655443 345778899999999887643 357
Q ss_pred CcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh----ccC---CCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PSS---LKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~----~~~---~~~iV~vSS~~~~ 206 (214)
+|++|||||+.... ....+..+..+++|+.|++.+++++ ++. .++||++||.+++
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~ 147 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN 147 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence 99999999975321 1122334566799999999988765 222 3699999999775
No 74
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.78 E-value=1.9e-18 Score=148.92 Aligned_cols=122 Identities=15% Similarity=0.144 Sum_probs=96.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCC-ChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~-d~~~v~~~~~~~~d~li~~A 159 (214)
+|+|+||||+|+||++++++|+++ |++|++++|+.+....+. ...+++++.+|++ +.+.+.+ ++.++|+|||+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~-~~~~~d~ViH~a 76 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV---NHPRMHFFEGDITINKEWIEY-HVKKCDVILPLV 76 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc---cCCCeEEEeCCCCCCHHHHHH-HHcCCCEEEECc
Confidence 368999999999999999999986 799999999776544332 1346889999998 6666665 467899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+.... .....++...+++|+.|+.++++++++..+++|++||..+|+.
T Consensus 77 a~~~~-~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~ 124 (347)
T PRK11908 77 AIATP-ATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGM 124 (347)
T ss_pred ccCCh-HHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeecc
Confidence 97652 2233455667899999999999998654479999999998874
No 75
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.9e-18 Score=143.33 Aligned_cols=129 Identities=13% Similarity=0.107 Sum_probs=101.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||+++++.|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++++++ ++
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG 86 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999999887766544332 346788999999999887633 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc------cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~------~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||...... ...++....+++|+.++.++++++. .+.++||++||.++..
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~ 152 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL 152 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC
Confidence 8999999999754211 2223446677999999999999873 3457899999987654
No 76
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.7e-18 Score=142.46 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=100.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+|+||++++++|+++|++|++++|++++.++..+.+. +.++.++.+|++|.+++++.+ +
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999999877665443332 346788999999999887632 4
Q ss_pred CCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||..... ....++..+.+++|+.++..+++++ +.+.+++|++||..++.+
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~ 150 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA 150 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC
Confidence 5789999999975321 1223344566789999998887754 234578999999887654
No 77
>PRK08643 acetoin reductase; Validated
Probab=99.78 E-value=2.1e-18 Score=142.07 Aligned_cols=127 Identities=18% Similarity=0.174 Sum_probs=97.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+|+++||||+||||++++++|+++|++|++++|+.++.+++..++. +.++.++++|++|++++++.+ ++++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999999877666544432 346778999999999887633 45799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c--CCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S--SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~--~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...+..+..+++|+.++..+++++. . ..++||++||..+..+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 145 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG 145 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC
Confidence 9999999764211 1122345667899999988887662 2 2368999999876543
No 78
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.78 E-value=2.3e-18 Score=147.77 Aligned_cols=126 Identities=24% Similarity=0.357 Sum_probs=96.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh--cccC-CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF--GKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~--~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
+++|+|+||||+|+||++++++|+++|++|++++|+.+...... ..+. ..+++++.+|++|.+++.+ .++++|+||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi 85 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEA-PIAGCDLVF 85 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHH-HHhcCCEEE
Confidence 45789999999999999999999999999999988765432211 1111 1257889999999998886 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~~ 208 (214)
|+||.... ...+.....+++|+.|+.++++++.+ +.++||++||.++|+.
T Consensus 86 h~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~ 137 (338)
T PLN00198 86 HVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSI 137 (338)
T ss_pred EeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeec
Confidence 99996421 11111234568999999999998843 4789999999988863
No 79
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.78 E-value=2.6e-18 Score=152.91 Aligned_cols=131 Identities=16% Similarity=0.150 Sum_probs=96.2
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh--------------------HHHHHhcccCCCCEEEEEe
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--------------------KATTLFGKQDEETLQVCKG 136 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~--------------------~~~~~~~~~~~~~~~~v~~ 136 (214)
....++|+|+||||+||||++++++|+++|++|++++|... .++... .....+++++.+
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~~v~~ 120 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWK-EVSGKEIELYVG 120 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHH-HhhCCcceEEEC
Confidence 35678899999999999999999999999999999875211 011110 011235889999
Q ss_pred cCCChhccchhhhC-CCcEEEeccCCCCCCCCCC--CCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEcccccccc
Q 028043 137 DTRNPKDLDPAIFE-GVTHVICCTGTTAFPSRRW--DGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSVGVTKF 208 (214)
Q Consensus 137 Di~d~~~v~~~~~~-~~d~li~~Ag~~~~~~~~~--~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vSS~~~~~~ 208 (214)
|++|.+.+++++-+ ++|+|||+|+....+.... ++....+++|+.|+.+++++++. +++ ++|++||.++||.
T Consensus 121 Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~ 197 (442)
T PLN02572 121 DICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGT 197 (442)
T ss_pred CCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCC
Confidence 99999999874322 6999999998754221111 12234468999999999999854 664 8999999999874
No 80
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.78 E-value=1.7e-18 Score=142.40 Aligned_cols=129 Identities=17% Similarity=0.131 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+|+++||||+|+||++++++|+++|++|++++|++++.++...++. +.++.++.+|++|++++++++ +++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999999887766544432 356888999999999887643 347
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+.....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~ 146 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG 146 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence 999999999765321 111223445678999987777765 235689999999876543
No 81
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.78 E-value=9.8e-19 Score=146.13 Aligned_cols=128 Identities=9% Similarity=0.072 Sum_probs=95.6
Q ss_pred CCCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHH---HHhcccCCCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQDEETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
..+++|+++||||++ |||+++|++|+++|++|++.+|+....+ ++.+.. + ....+++|++|++++++++
T Consensus 3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL-G-SDFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc-C-CceEEeCCCCCHHHHHHHHHHHH
Confidence 346789999999997 9999999999999999999998764332 222222 1 2346889999999988643
Q ss_pred --hCCCcEEEeccCCCCCC-------CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 --FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~-------~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||..... ..+.+++...+++|+.++.++++++.+ ..++||++||.++..
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~ 151 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR 151 (271)
T ss_pred HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc
Confidence 57899999999975321 122334566779999999999887632 236899999987643
No 82
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.78 E-value=1.3e-18 Score=143.56 Aligned_cols=127 Identities=16% Similarity=0.190 Sum_probs=100.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+.+|+++||||+||||++++++|+++|++|++++|+.+..+++.+.+ ...+.++.+|++|++++++++ ++++
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 356799999999999999999999999999999999998877765544 245788999999999987643 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc------CCCeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~------~~~~iV~vSS~~~~ 206 (214)
|+||||||...... ..+++....+++|+.++.++++++.+ ..++||++||..+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~ 144 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR 144 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC
Confidence 99999999764211 22334566788999999999998732 13589999997654
No 83
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.78 E-value=2.3e-18 Score=143.58 Aligned_cols=122 Identities=18% Similarity=0.180 Sum_probs=96.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
+|+++||||+||||++++++|+++|++|++++|+.++.+++.. .++.++.+|++|.+++++.+ ++++|+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 76 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVL 76 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999999999999999999887766542 34678899999999887633 3579999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~ 207 (214)
|||||...... ..+++....+++|+.|+.++++++ +.+.++||++||.++..
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~ 135 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL 135 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC
Confidence 99999764221 222344567799999999999876 23457899999987654
No 84
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1e-18 Score=147.03 Aligned_cols=128 Identities=13% Similarity=0.107 Sum_probs=98.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh---------hHHHHHhcccC--CCCEEEEEecCCChhccchhh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+++|+++||||++|||++++++|++.|++|++++|+. +.++++.+++. +.++.++.+|++|++++++.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 5689999999999999999999999999999998865 55555444332 345778899999999887633
Q ss_pred ------hCCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHhc----cC-------CCeEEEEccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP----SS-------LKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~~----~~-------~~~iV~vSS~~~~~ 207 (214)
++++|+||||||..... ....++....+++|+.|++++++++. .. .++||++||.++..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 46899999999986421 12223446678999999999988662 11 25899999987754
No 85
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=1.9e-18 Score=141.62 Aligned_cols=129 Identities=13% Similarity=0.174 Sum_probs=96.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEE-EEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+.+|+++||||+||||++++++|+++|++|++ .+|+.++.+++.+++. +.++.++.+|++|++++++++ ++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999999876 4787776655544332 346788999999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+.....+++|+.++.++++++. .+.++||++||..+..+
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 147 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY 147 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence 7999999999754221 1112223456899999999998772 34569999999876543
No 86
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.77 E-value=1.9e-18 Score=142.77 Aligned_cols=130 Identities=15% Similarity=0.171 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|++.|++|++++|+ ++.+++.+.+. +.++.++++|++|.+++++.+ +
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999998 33333332221 346788999999999887633 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... ...++.+..+++|+.++.++++++. .+.++||++||..++.+
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG 156 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC
Confidence 57999999999864211 1222345667899999988888662 34579999999987643
No 87
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=2.7e-18 Score=141.56 Aligned_cols=126 Identities=20% Similarity=0.226 Sum_probs=95.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+.+.+|+++||||+||||++++++|+++|++|++++++.+ ..+++.. .++.++.+|++|++++++++ ++
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFG 78 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3457899999999999999999999999999998876543 3333332 24778999999999988743 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||...... ...++....+++|+.|+.++++++ + .+.++||++||.++++
T Consensus 79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 143 (255)
T PRK06463 79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIG 143 (255)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCC
Confidence 7999999999864211 222344567899999988777654 2 3457999999988764
No 88
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.77 E-value=2.9e-18 Score=141.00 Aligned_cols=131 Identities=13% Similarity=0.103 Sum_probs=100.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.++.+++.+++. +..+..+++|++|.+++++++ +
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35678999999999999999999999999999999999887766554432 335778999999999887533 4
Q ss_pred CCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||..... ....++....+++|+.++.++++++ + .+.++||++||..+..+
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 151 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP 151 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC
Confidence 5799999999964311 1222233557789999999888866 2 34579999999876543
No 89
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.77 E-value=2.2e-18 Score=143.80 Aligned_cols=130 Identities=18% Similarity=0.187 Sum_probs=100.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++.+|+++||||+||||++++++|+++|++|++++|+.+..+++.+++. +.++.++++|++|++++++++ ++
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999999877766554432 345788999999999887633 46
Q ss_pred CCcEEEeccCCCCCCC------------------CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS------------------RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~------------------~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||...... ...++....+++|+.++..+++++ +.+.++||++||.+++.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 166 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT 166 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence 8999999999653211 111233456789999998877755 23457999999998876
Q ss_pred c
Q 028043 208 F 208 (214)
Q Consensus 208 ~ 208 (214)
+
T Consensus 167 ~ 167 (278)
T PRK08277 167 P 167 (278)
T ss_pred C
Confidence 4
No 90
>PRK06128 oxidoreductase; Provisional
Probab=99.77 E-value=2.1e-18 Score=145.98 Aligned_cols=130 Identities=12% Similarity=0.100 Sum_probs=99.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh--HHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+||||++++++|+++|++|+++.++.+ ..+++.+.+. +.++.++.+|++|.+++++++
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998877543 2333322221 345778999999999887643
Q ss_pred hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||..... ....++....+++|+.|++++++++.+ ..++||++||.+++.+
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~ 198 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP 198 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC
Confidence 46899999999975321 123345567789999999999998743 2369999999988754
No 91
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3e-18 Score=139.72 Aligned_cols=128 Identities=9% Similarity=0.033 Sum_probs=96.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++++|+++||||++|||++++++|+++|++|++++|++++++++.+++. +.++..+.+|++|++++++++ ++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999999999999999988777654332 345677889999999988633 46
Q ss_pred -CCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----c-cC-CCeEEEEcccccc
Q 028043 151 -GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVT 206 (214)
Q Consensus 151 -~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~-~~-~~~iV~vSS~~~~ 206 (214)
++|++|||||....+. ..+++..+.+++|+.++..+++++ + .+ .+.||++||..+.
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~ 148 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH 148 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC
Confidence 8999999998643221 112223445677888888777654 2 22 4799999997654
No 92
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.77 E-value=3.5e-18 Score=141.76 Aligned_cols=129 Identities=10% Similarity=0.044 Sum_probs=101.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+.+|+++||||+|+||++++++|+++|++|++++|+++++++..+.+. +.++.++++|++|++++++++ +
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999887766544432 346788999999999988743 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||...... ..++.....+++|+.|+..+++++. .+.++||++||..+.
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 150 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE 150 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc
Confidence 57999999999865321 2233445667899999998888762 356799999997654
No 93
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.77 E-value=5.2e-18 Score=146.59 Aligned_cols=127 Identities=24% Similarity=0.354 Sum_probs=97.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+|+||||||+|+||++++++|+++|++|++++|+.+..+.+...+. ..+++++.+|++|.+.+.++ +.++|+|||+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~A 87 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEA-VKGCDGVFHVA 87 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHH-HcCCCEEEECC
Confidence 56899999999999999999999999999999998766554433221 34688899999999998874 67899999999
Q ss_pred CCCCCCC-CCCCCCCc-----hhHHHHHHHHHHHHHhc-c-CCCeEEEEcccccccc
Q 028043 160 GTTAFPS-RRWDGDNT-----PEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~-~~~~~~~~-----~~~vNv~g~~~l~~a~~-~-~~~~iV~vSS~~~~~~ 208 (214)
|...... ....+... .+++|+.|+.++++++. . +.++||++||.++|+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~ 144 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTA 144 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccc
Confidence 9865321 11122222 33456799999999884 4 3689999999998863
No 94
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3.6e-18 Score=141.50 Aligned_cols=129 Identities=20% Similarity=0.222 Sum_probs=100.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh-----hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI-----FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~-----~~~~ 152 (214)
.+++++++||||+||||++++++|+++|++|++++|++++.+++.+++. +.++.++.+|++|++++++.. ++++
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 3567899999999999999999999999999999999888776654432 346888999999999877632 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...+...+.+++|+.|+.++++++. .+.++||++||..+..
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 144 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI 144 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc
Confidence 99999999864321 1222335567899999999998762 2347899999986643
No 95
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.77 E-value=1.6e-18 Score=142.99 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=85.7
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
+..+++|+++||||+||||++++++|+++|++|++++|+.. ..+... .. ....+.+|++|.+++++ .++++|++
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~-~~~~iDil 83 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND---ES-PNEWIKWECGKEESLDK-QLASLDVL 83 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc---cC-CCeEEEeeCCCHHHHHH-hcCCCCEE
Confidence 34567899999999999999999999999999999999873 222211 11 22568899999999886 47899999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~ 190 (214)
|||||.........++..+.+++|+.|+.++++++
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 118 (245)
T PRK12367 84 ILNHGINPGGRQDPENINKALEINALSSWRLLELF 118 (245)
T ss_pred EECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999864333334455677899999999999976
No 96
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.77 E-value=2.9e-18 Score=141.83 Aligned_cols=126 Identities=19% Similarity=0.215 Sum_probs=94.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
|+++||||+||||++++++|+++|++|++++|+++.+++..+++. ..++.++++|++|++++++++ ++++|+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 479999999999999999999999999999999887766554442 235778999999999888643 4689999
Q ss_pred EeccCCCCCC-----CCCCCCCCchhHHHHHHHHHHHHHh----c--cCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSAL----P--SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~-----~~~~~~~~~~~~vNv~g~~~l~~a~----~--~~~~~iV~vSS~~~~~~ 208 (214)
|||||..... ...+++..+.+.+|+.++..+++++ . .+.++||++||.++..+
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~ 144 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP 144 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC
Confidence 9999975321 1122233445678888877666543 2 24579999999987643
No 97
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3e-18 Score=142.37 Aligned_cols=130 Identities=16% Similarity=0.154 Sum_probs=99.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+++.+++..+.+. ..++.++.+|++|++++++++ +
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999999877655433322 235678899999999887643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
+++|++|||||...... ...++....+++|+.|+.++++++. +..++||++||.++..
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~ 149 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV 149 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc
Confidence 57999999998643211 1222334567899999999998763 2336999999987653
No 98
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3.4e-18 Score=140.70 Aligned_cols=128 Identities=16% Similarity=0.230 Sum_probs=98.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++.+|+++||||+|+||++++++|+++|++|++++|+++..+. ........+..+.+|++|++++++.+ ++++
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEV-AAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999999999999999998764332 22333445678999999999887643 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...++....+++|+.|+.++++++. .+.++||++||.++..
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 153 (255)
T PRK06841 91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV 153 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc
Confidence 99999999864321 1222335567999999999999762 2467999999987643
No 99
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.77 E-value=3e-18 Score=140.42 Aligned_cols=128 Identities=14% Similarity=0.098 Sum_probs=96.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++|+++||||+||||++++++|+++|++|++++|+... ..+..... +..+.++++|++|++++++++ ++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999999997632 22211111 345788999999999987533 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
|++|||||...... ...+..++.+++|+.++.++++++. ++ .++||++||..++.+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 146 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG 146 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC
Confidence 99999999865211 1222345567899999999998762 22 469999999887654
No 100
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.77 E-value=2.8e-18 Score=141.68 Aligned_cols=130 Identities=21% Similarity=0.194 Sum_probs=100.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+|+||++++++|+++|++|++++|+.++.+...+.+. +.++.++.+|++|++++++.+ +
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999999877666544332 345778999999999986533 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc------cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~------~~~~~iV~vSS~~~~~ 207 (214)
+++|++|||||...... ..++...+.+++|+.++.++++++. ++.++||++||..++.
T Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~ 154 (259)
T PRK08213 88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLG 154 (259)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhcc
Confidence 57999999999754221 1222335567899999999999762 2457899999987654
No 101
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.77 E-value=4.2e-18 Score=140.33 Aligned_cols=130 Identities=12% Similarity=0.077 Sum_probs=102.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+|+||++++++|+++|++|++++|+++.++++.+++. +.++.++.+|++|++++.+++ +
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999999999999999877666544332 345888999999999887643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|++|||||...... ...++..+.+++|+.|+.++++++. .+.+++|++||..+..
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 152 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV 152 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc
Confidence 57899999999864211 1223345567899999999997662 3567999999987654
No 102
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3.8e-18 Score=140.90 Aligned_cols=123 Identities=20% Similarity=0.207 Sum_probs=95.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|+++... ..++.++++|++|++++++.+ ++++
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 78 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL-------PEGVEFVAADLTTAEGCAAVARAVLERLGGV 78 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc-------CCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999999999999865321 245778999999999877532 4689
Q ss_pred cEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++....+++|+.|+.++++++ + .+.++||++||..++.+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 144 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP 144 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence 99999999653211 122334566789999998887765 2 34578999999887654
No 103
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=3.8e-18 Score=139.22 Aligned_cols=129 Identities=19% Similarity=0.228 Sum_probs=100.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||+|+||++++++|+++|++|++++|++++.++..+++. +.++.++.+|++|++++++++ +++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999999877665443332 346788999999999887643 358
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ..+++..+.+++|+.|+.++++++. .+.+++|++||.+++.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 149 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG 149 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC
Confidence 999999999864221 1223345667999999999988762 35678999999877654
No 104
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.77 E-value=3.6e-18 Score=139.90 Aligned_cols=128 Identities=18% Similarity=0.195 Sum_probs=99.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++|+++||||+|+||++++++|+++|++|++++|+.+..+++.+.+. +.++.++.+|++|.+++++++ ++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999877665543322 346888999999999888743 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|++|||||...... ...+.....+++|+.++.++++++ +.+.++||++||.+++..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~ 145 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG 145 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC
Confidence 99999999754221 112223456789999999988876 235679999999987654
No 105
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3e-18 Score=145.63 Aligned_cols=127 Identities=13% Similarity=0.056 Sum_probs=94.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----------hHHHHHhcccC--CCCEEEEEecCCChhccch
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----------EKATTLFGKQD--EETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----------~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~ 146 (214)
.+++|+++||||++|||++++++|++.|++|++++|+. ++++++.+.+. +..+.++++|++|++++++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 46789999999999999999999999999999999973 33443333222 3356789999999999886
Q ss_pred hh------hCCCcEEEecc-CCCCC-----CC--CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccc
Q 028043 147 AI------FEGVTHVICCT-GTTAF-----PS--RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV 205 (214)
Q Consensus 147 ~~------~~~~d~li~~A-g~~~~-----~~--~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~ 205 (214)
++ ++++|++|||| |.... +. ...++..+.+++|+.+++.+++++. .+.++||++||..+
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~ 162 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA 162 (305)
T ss_pred HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence 43 56899999999 75311 11 1122334567899999999888662 23479999999654
No 106
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3.3e-18 Score=140.88 Aligned_cols=126 Identities=18% Similarity=0.239 Sum_probs=98.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+|+++||||+||||++++++|+++|++|++++|+.++.+++.+.+. +.++.++++|++|++++++++ ++++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 5899999999999999999999999999999999887766544332 346788999999999887633 46799
Q ss_pred EEEeccCCCCC-C--CCCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccc
Q 028043 154 HVICCTGTTAF-P--SRRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~-~--~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~ 207 (214)
+||||||.... + ....+++.+.+++|+.|++++++++. .. .++||++||..++.
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~ 143 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD 143 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc
Confidence 99999996432 1 11223345678999999999999772 22 36899999987754
No 107
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.77 E-value=4.2e-18 Score=138.98 Aligned_cols=128 Identities=20% Similarity=0.214 Sum_probs=100.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++++|+++||||+|+||++++++|+++|+.|++.+|+.++++++.... +.++.++.+|++|.+++++++ ++++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANLSDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 356789999999999999999999999999999999988877655433 346788999999999887632 4679
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...++....+++|+.++.++++++. ++.++||++||.++..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 144 (245)
T PRK12936 82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT 144 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc
Confidence 99999999864211 1223345667899999999988762 3567899999986654
No 108
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3.3e-18 Score=138.84 Aligned_cols=130 Identities=21% Similarity=0.239 Sum_probs=100.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+|+||++++++|+++|++|++++|++++..+..+.+....++.+.+|++|.+++++++ ++++
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 4568999999999999999999999999999999998876555443333445678889999999887633 4579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+|||+||...... ...+...+.+++|+.++.++++++ +.+.++||++||..++.+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA 147 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC
Confidence 99999999754211 112223455689999999998876 235789999999987654
No 109
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.76 E-value=4.5e-18 Score=140.98 Aligned_cols=129 Identities=12% Similarity=0.107 Sum_probs=97.6
Q ss_pred CCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcC---hhHHHHHhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRD---PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
++.+|+++||||+ +|||++++++|+++|++|++++|+ .+.++++.+++.+.++.++++|++|++++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 3568999999997 899999999999999999999765 344555555444456788999999999988643
Q ss_pred -hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||.... + ..+.+.....+++|+.++.++++++.+ ..++||++||.++..
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 153 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER 153 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc
Confidence 4689999999997531 1 112223345678999999988887632 236899999987754
No 110
>PRK07985 oxidoreductase; Provisional
Probab=99.76 E-value=3.4e-18 Score=144.49 Aligned_cols=130 Identities=13% Similarity=0.107 Sum_probs=98.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+||||++++++|+++|++|++.+|+. +..+++.+.+. +.++.++.+|++|++++++++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999987643 33334332221 345778999999999887633
Q ss_pred hCCCcEEEeccCCCCC----CCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAF----PSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~----~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|++|||||.... ....+++..+.+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~ 192 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP 192 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC
Confidence 5689999999997431 1123345567789999999999998732 2368999999988754
No 111
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.76 E-value=3.8e-18 Score=139.42 Aligned_cols=128 Identities=19% Similarity=0.183 Sum_probs=99.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++|+++||||+|+||++++++|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++.+++ ++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999999877666544332 346788999999999877633 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++....+++|+.++.++++++ +.+.++||++||..++.+
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 148 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA 148 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC
Confidence 99999999764211 122334556789999999988865 234578999999987654
No 112
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.76 E-value=3.2e-18 Score=146.45 Aligned_cols=127 Identities=17% Similarity=0.183 Sum_probs=95.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCC--hhccchh--hhC--
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRN--PKDLDPA--IFE-- 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d--~~~v~~~--~~~-- 150 (214)
.|++++||||+||||++++++|+++|++|++++|++++++++.+++. +.++..+.+|+++ .+.+++. .++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 58999999999999999999999999999999999998877655442 2356778899985 2222221 134
Q ss_pred CCcEEEeccCCCCCC-----CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~-----~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++|++|||||..... ...+++....+++|+.|+.++++++ +++.++||++||.+++.
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~ 198 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIV 198 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc
Confidence 366999999986421 1222334567899999999999876 23567999999988753
No 113
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.76 E-value=5.6e-18 Score=138.63 Aligned_cols=129 Identities=19% Similarity=0.146 Sum_probs=100.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+|+++||||+|+||++++++|+++|++|++++|++++.++..+.+. +.++.++.+|++|++++++.+ +++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 567999999999999999999999999999999999887766544332 346888999999999887643 357
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+.....+++|+.++.++++++. .+.+++|++||.+++.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG 149 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC
Confidence 999999999865321 1222334556899999999998762 23569999999876543
No 114
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.76 E-value=3.6e-18 Score=141.43 Aligned_cols=130 Identities=14% Similarity=0.149 Sum_probs=95.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC---CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+++|+++||||++|||++++++|+++|++|++++| +++.+++..+++. +.++.++.+|++|++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999998865 5555554433322 346788999999999887643
Q ss_pred -hCCCcEEEeccCCCCC-------C--CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-------P--SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-------~--~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||.... + ....+.....+++|+.+...+++++ + .+.++||++||.++..
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 157 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV 157 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc
Confidence 4679999999986421 1 0112233556788998888777755 2 2346999999987643
No 115
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.76 E-value=3.6e-18 Score=141.50 Aligned_cols=128 Identities=12% Similarity=0.086 Sum_probs=96.7
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChhH---HHHHhcccCCCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEK---ATTLFGKQDEETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
+++++|+++||||+ +|||++++++|+++|++|++++|+.+. ++++.+++. ...++.+|++|++++++++
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD--APIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc--cceEEecCcCCHHHHHHHHHHHH
Confidence 45678999999998 599999999999999999999998643 333333332 3457899999999988633
Q ss_pred --hCCCcEEEeccCCCCCC-------CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 --FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~-------~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||..... ....++.++.+++|+.|+.++++++.+ ..++||++||.++..
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~ 154 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK 154 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc
Confidence 46899999999975311 122234566789999999999997632 236899999987643
No 116
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.76 E-value=5.9e-18 Score=141.40 Aligned_cols=131 Identities=19% Similarity=0.173 Sum_probs=103.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
..+.+|+++||||++|||+++|++|++.|++|++++|+++++++....+. +.++..+.+|+++++++++..
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 55789999999999999999999999999999999999998777654432 345788999999988877633
Q ss_pred ---hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHH-HHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 149 ---FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEG-VRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ---~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g-~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
++++|++|||||...... ...+.+++.+++|+.| .+++.+++ + .+.+.|+++||.++...
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~ 156 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP 156 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC
Confidence 578999999999987432 2334456778999996 56566555 2 25678999999887654
No 117
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.76 E-value=6.2e-18 Score=139.01 Aligned_cols=124 Identities=17% Similarity=0.246 Sum_probs=97.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVI 156 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~li 156 (214)
|+++||||+||||++++++|+++|++|++++|++++++++...+ +.++.++.+|++|.+++++.+ ++++|+||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57999999999999999999999999999999998877665443 346788999999999887633 35799999
Q ss_pred eccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 157 CCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
||||.... + ...+++..+.+++|+.|+..+++++ +.+.++||++||.++..
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 139 (248)
T PRK10538 80 NNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW 139 (248)
T ss_pred ECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC
Confidence 99997531 1 1223344667899999988877765 23567999999987653
No 118
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.76 E-value=6.6e-18 Score=138.25 Aligned_cols=126 Identities=20% Similarity=0.250 Sum_probs=98.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++|+++||||+|+||++++++|+++|++|++++|+++.+++..+++ +.++.++++|++|.+++.+.. ++++|
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADAGDVAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999999999999999999999999999999987776655444 345778999999988776522 45799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
++|||||...... ...++..+.+++|+.|+.++++++.+ ..+++|++||.++.
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~ 141 (249)
T PRK06500 83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH 141 (249)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc
Confidence 9999999765322 12234456789999999999998842 34678888886653
No 119
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.76 E-value=6.8e-18 Score=139.59 Aligned_cols=127 Identities=14% Similarity=0.219 Sum_probs=95.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhH-HHHHhcccC---CCCEEEEEecCCChhccchhh-----hC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEK-ATTLFGKQD---EETLQVCKGDTRNPKDLDPAI-----FE 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~-~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~-----~~ 150 (214)
++|+|+||||+||||++++++|+++| ++|++++|+++. ++++.+++. ..+++++.+|++|++++++.+ .+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 46899999999999999999999995 899999998875 555443332 236889999999999876532 25
Q ss_pred CCcEEEeccCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGD---NTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~---~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++|++|||+|........+.+. .+.+++|+.|+..+++++ + .+.++||++||.++..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~ 151 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER 151 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC
Confidence 7999999999864322222222 235799999998866543 3 4568999999987644
No 120
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.76 E-value=6.8e-18 Score=139.21 Aligned_cols=130 Identities=10% Similarity=0.139 Sum_probs=100.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+.+|+++||||+||||++++++|+++|++|++++|+.+..+++..++. +.++.++.+|++|.+++++++ +
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999998877665543332 345778899999999887643 3
Q ss_pred CCCcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|++|||||...... ..+++..+.+++|+.|+.++++++. .+.++||++||.++..
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 151 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN 151 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC
Confidence 57999999999754221 1223344557899999999999773 2346999999987754
No 121
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.76 E-value=8.1e-18 Score=139.06 Aligned_cols=129 Identities=16% Similarity=0.118 Sum_probs=100.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh--hCCCc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI--FEGVT 153 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~--~~~~d 153 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.++..+++. +.++.++.+|++|++++++++ ++++|
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 4578999999999999999999999999999999999887766544332 345788999999999987643 46899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++|||||...... ...++....+++|+.++.++++++ + .+.++||++||..+..
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 145 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN 145 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC
Confidence 9999999754211 222344666799999999998876 2 2346899999987653
No 122
>PRK05855 short chain dehydrogenase; Validated
Probab=99.76 E-value=6e-18 Score=154.00 Aligned_cols=132 Identities=15% Similarity=0.067 Sum_probs=103.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+.+++++||||+||||++++++|+++|++|++++|+.++++++.+.+. +.++.++.+|++|++++++.+ +
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 34567899999999999999999999999999999999888776654432 346788999999999887643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccccC
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~~ 209 (214)
+++|+||||||...... ...++....+++|+.|+.++++++. ++ .++||++||.+++.+.
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 459 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS 459 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 57999999999865322 2223445667899999999998752 22 3689999999887643
No 123
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.76 E-value=1.6e-18 Score=133.75 Aligned_cols=127 Identities=24% Similarity=0.245 Sum_probs=100.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC--hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD--PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~--~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
|+++||||++|||++++++|+++|. +|+++.|+ .+..+++.+++. +.++.++++|+++++++++.+ +++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999999999955 68888998 555665544332 567889999999999988743 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccccC
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~~ 209 (214)
+|++|||||...... ...+.....+++|+.++..+.+++.+ +.++||++||.++..+.
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 142 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS 142 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCC
Confidence 999999999876322 11233456789999999999998854 67899999999886543
No 124
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.76 E-value=6.7e-18 Score=140.99 Aligned_cols=126 Identities=17% Similarity=0.238 Sum_probs=97.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++|+++||||+|+||+++++.|+++|++|++++|+++..+++.+... +.+++++.+|++|++++++ + ++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 56899999999999999999999999999999999877665543221 2468889999999988764 2 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++|++|||||...... ..++...+.+++|+.|+.++++++ + .+.++||++||.++..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~ 145 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV 145 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC
Confidence 7999999999765221 112233456789999999998875 2 3567999999976543
No 125
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1e-17 Score=138.42 Aligned_cols=131 Identities=11% Similarity=0.133 Sum_probs=97.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
++.++|+++||||+||||++++++|+++|++|++++++ .+..+.+.+.+. +.++.++.+|++|.+++++++
T Consensus 5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999887764 444444433321 346788999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ..++...+.+++|+.|+.++++++. ...+++|+++|...+.+
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~ 152 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL 152 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC
Confidence 357999999999764211 2233446678999999999999762 23468999998766544
No 126
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.76 E-value=6e-18 Score=139.55 Aligned_cols=130 Identities=14% Similarity=0.113 Sum_probs=98.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.++++|+++||||+||||++++++|+++|++|++++|+++.. +..+.+. +.++.++.+|++|++++++.+ +
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 356789999999999999999999999999999999988765 3322221 346888999999999887643 3
Q ss_pred CCCcEEEeccCCCCCCCC--CCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~--~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||....... ..++....+++|+.++.++++++ +...++||++||..+..+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~ 146 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG 146 (258)
T ss_pred CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC
Confidence 579999999997542111 11334556789999999988876 234478999999877643
No 127
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=7.5e-18 Score=140.84 Aligned_cols=126 Identities=10% Similarity=0.104 Sum_probs=95.6
Q ss_pred CCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcCh---hHHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++||||+ +|||++++++|+++|++|++++|++ ++++++.+++. ....+++|++|++++++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHHh
Confidence 467999999997 8999999999999999999988874 33444443332 2456899999999988743
Q ss_pred hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||+... + ..+.++....+++|+.|+.++++++.+ ..++||++||.++..
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~ 154 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK 154 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 4689999999997641 1 122334566789999999999997632 337899999987643
No 128
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=5.5e-18 Score=141.03 Aligned_cols=126 Identities=10% Similarity=0.125 Sum_probs=93.2
Q ss_pred CCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcCh---hHHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++||||++ |||++++++|+++|++|++.+|+. +..+++.... .....+.+|++|++++++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHhh
Confidence 5689999999985 999999999999999999999873 2233332222 24567889999999998743
Q ss_pred hCCCcEEEeccCCCCCCC--------CCCCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS--------RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~--------~~~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||+..... ..++.....+++|+.|+..+++++. ...++||++||.++..
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~ 151 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER 151 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC
Confidence 567999999999753211 1122334567889999999888763 2236899999987643
No 129
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.75 E-value=5.1e-18 Score=132.33 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=103.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++.|.++||||++|||+++++.|++.|++|.+.+++.+..++....+++ .+-..+.||++++++++..+ ++.+
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 4568999999999999999999999999999999999888888777764 34557899999999887622 5689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-cc------CCCeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-PS------SLKRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-~~------~~~~iV~vSS~~~~ 206 (214)
++||||||+..... +..+++++.+.+|+.|++++.+++ +. +..+||++||+-+-
T Consensus 92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk 155 (256)
T KOG1200|consen 92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK 155 (256)
T ss_pred cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc
Confidence 99999999986321 344566778899999999999876 21 23489999998553
No 130
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.75 E-value=8.3e-18 Score=138.35 Aligned_cols=129 Identities=14% Similarity=0.068 Sum_probs=95.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh--------
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------- 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-------- 148 (214)
+++|+++||||+||||++++++|++.|++|++.+ |+.+..++...++. +..+..+.+|++|.++++...
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 3579999999999999999999999999999875 55555554433322 335677889999988776422
Q ss_pred --hC--CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 --FE--GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~--~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++ ++|+||||||...... ...+..+..+++|+.|++.+++++.+ ..++||++||.+++.+
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 151 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS 151 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC
Confidence 12 7999999999754211 12223456678999999999987732 2369999999988654
No 131
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=6.1e-18 Score=140.45 Aligned_cols=126 Identities=12% Similarity=0.179 Sum_probs=92.1
Q ss_pred CCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++|||| ++|||+++|++|+++|++|++.+|+.. .++++.... .....+++|++|++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHHH
Confidence 56899999997 679999999999999999999877642 233332222 23457899999999988743
Q ss_pred hCCCcEEEeccCCCCCC----C----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFP----S----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~----~----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||..... . ..++..+..+++|+.++.++++++. ...++||++||.++..
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~ 152 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR 152 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc
Confidence 56899999999986421 0 1112234456889999998888652 2336899999988754
No 132
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.75 E-value=7.8e-18 Score=137.81 Aligned_cols=126 Identities=17% Similarity=0.129 Sum_probs=97.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhh---hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI---FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~---~~~~d~l 155 (214)
||+++||||+||||++++++|+++|++|++++|++++.++..+.+ ...+++++++|++|++++++.+ ...+|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 478999999999999999999999999999999988766544332 1346889999999999887643 2357999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|||||...... .++++..+.+++|+.|+.++++++. .+.+++|++||..+..
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 140 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR 140 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC
Confidence 99999754221 1222334567899999999998762 3567899999986643
No 133
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.75 E-value=9.5e-18 Score=137.23 Aligned_cols=127 Identities=19% Similarity=0.203 Sum_probs=99.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||+|+||++++++|+++|++|++++|+.++..+..+.+. ..++.++.+|++|++++++.+ +++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999999776655433332 345888999999999888743 247
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
+|+|||+||...... ...++..+.+++|+.++.++++++ +.+.++||++||..++
T Consensus 84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence 999999999865311 112233556789999999999876 2356789999998876
No 134
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.2e-17 Score=139.53 Aligned_cols=129 Identities=19% Similarity=0.234 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+. +.++.++.+|++|++++++++ +++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 456899999999999999999999999999999998877665443322 345778899999999987633 357
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|++|||||...... ..++...+.+++|+.|+.++++++ +.+.++||++||..++.+
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~ 152 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ 152 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC
Confidence 999999999764211 112233455689999999998875 234568999999887654
No 135
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.75 E-value=1.1e-17 Score=137.94 Aligned_cols=129 Identities=12% Similarity=0.045 Sum_probs=97.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+.+|+++||||+||||++++++|++.|++|++++++... .+++. .. +..+..+++|++|.+++++++ +
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-AL-GRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999988775421 22222 11 345778999999999888643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... ...++..+.+++|+.|+.++++++. ++ .++||++||..++.+
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 151 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG 151 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC
Confidence 57999999999864211 2233456778999999999988762 22 368999999987654
No 136
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.75 E-value=9.1e-18 Score=137.45 Aligned_cols=124 Identities=15% Similarity=0.129 Sum_probs=96.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh---CCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~---~~~d~li~~ 158 (214)
+++++||||+||||++++++|+++|++|++++|++++++++.+. ..++.++.+|++|.+++++++- ..+|.+|||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--SANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh--cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 37899999999999999999999999999999999887776543 2357789999999999887431 247999999
Q ss_pred cCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 159 Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
||...... ..++...+.+++|+.|+.++++++.+ ..+++|++||.++..
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~ 133 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL 133 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc
Confidence 99653211 12223356789999999999998743 346799999976543
No 137
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.75 E-value=7.6e-18 Score=140.15 Aligned_cols=126 Identities=14% Similarity=0.128 Sum_probs=97.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
|+++||||+||||++++++|+++|++|++++|+.++.+++.+.+. +.++.++.+|++|++++++.+ ++++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999999999999887766544332 346788999999999887633 357999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
||||||...... ...++.+..+++|+.++.++++++ + .+.++||++||.+++.+
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 142 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ 142 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC
Confidence 999999865321 122233456789999999888765 2 35679999999877653
No 138
>PRK06484 short chain dehydrogenase; Validated
Probab=99.75 E-value=7.4e-18 Score=152.45 Aligned_cols=129 Identities=18% Similarity=0.233 Sum_probs=103.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
...+|+++||||+||||++++++|+++|++|++++|++++++++.++. +..+..+.+|++|++++++.+ ++++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-GDEHLSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 447899999999999999999999999999999999998887766544 345677899999999887643 4679
Q ss_pred cEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
|+||||||.... + ....++.++.+++|+.|+.++++++.+ ..++||++||.++..+
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 407 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA 407 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC
Confidence 999999997631 1 122234466789999999999997732 3469999999987654
No 139
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.75 E-value=7.3e-18 Score=139.14 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=96.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+. ...+.++.+|++|.+++++++ +++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999999999877665543321 245888999999999887643 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~ 206 (214)
+|++|||||...... ..+++..+.+++|+.|+.++++++. ++ .++||++||.++.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~ 145 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK 145 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc
Confidence 999999999765321 1222335567899999998888662 23 4699999997653
No 140
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.75 E-value=9e-18 Score=136.62 Aligned_cols=128 Identities=21% Similarity=0.281 Sum_probs=99.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++++++||||+|+||++++++|+++|++|++++|++++.+++.+.+.. .+++++++|++|.+++++.+ ++++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999999998877665444321 46888999999999887633 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
|+|||+||...... ...+...+.+++|+.++.++++++. .+.++||++||.++..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 145 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN 145 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc
Confidence 99999999764321 1222334567899999999988762 3557899999987654
No 141
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.75 E-value=1.2e-17 Score=135.96 Aligned_cols=128 Identities=23% Similarity=0.223 Sum_probs=98.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++++|+++||||+|+||++++++|+++|++|++++|++++.+.....+. +.++.++.+|++|++++.+++ ++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999999999999887665444332 346788999999999887633 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
++|++||+||...... ...+.....+++|+.++.++++++ +.+.++||++||..+.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~ 145 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV 145 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc
Confidence 6899999999865321 111223455788999999998877 2356799999998654
No 142
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.75 E-value=5.8e-18 Score=140.35 Aligned_cols=123 Identities=18% Similarity=0.194 Sum_probs=96.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+++..+ ..++.++.+|++|++++++++ +++
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR 77 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3567899999999999999999999999999999999876532 235778999999999887633 467
Q ss_pred CcEEEeccCCCCCCC------------CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS------------RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~------------~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ...++.+..+++|+.|+.++++++. .+.++||++||..++.
T Consensus 78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (266)
T PRK06171 78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE 150 (266)
T ss_pred CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence 999999999753210 1112234567899999999998773 2346899999988754
No 143
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=9.4e-18 Score=139.23 Aligned_cols=127 Identities=11% Similarity=0.086 Sum_probs=94.1
Q ss_pred CCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+++|+++||||++ |||++++++|+++|++|++.+|++. ..+++.++. + ....+++|++|++++++++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~-g-~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI-G-CNFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc-C-CceEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999997 9999999999999999999998742 223332222 1 2245789999999988743
Q ss_pred -hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||.... + ..+.+++.+.+++|+.+++.+++++.+ ..++||++||.++..
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~ 152 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK 152 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc
Confidence 5689999999997531 1 122334566789999999999987632 236999999987653
No 144
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.1e-17 Score=139.49 Aligned_cols=130 Identities=17% Similarity=0.257 Sum_probs=99.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+|+||++++++|+++|++|++++|++++.++..+.+. ..++.++.+|++|++++++.+
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567999999999999999999999999999999999877655443322 246788899999999887633
Q ss_pred hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|++|||||..... ...+++....+++|+.++.++++++. .+.++||++||.+++..
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~ 152 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT 152 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC
Confidence 34799999999965311 12222345567889999999988662 23468999999887653
No 145
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.4e-17 Score=137.23 Aligned_cols=125 Identities=18% Similarity=0.188 Sum_probs=97.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
+|+++||||+|+||++++++|+++|++|++++|++++.+++.+.+.+.+++++++|++|.+++.+++ ++++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5799999999999999999999999999999999888776655444456888999999999887643 2469999
Q ss_pred EeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 156 ICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 156 i~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
|||||....... ..+.....+.+|+.++.++++++ +.+.++||++||..+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 140 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM 140 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc
Confidence 999998643221 11122344578999999998876 2345789999997654
No 146
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.75 E-value=9e-18 Score=140.21 Aligned_cols=130 Identities=15% Similarity=0.160 Sum_probs=97.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-------HHHHhcccC--CCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-------ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+.+. +++..+++. +.++.++.+|++|++++++.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 34578999999999999999999999999999999997642 222222221 346788999999999887643
Q ss_pred ------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||..+..
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 154 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD 154 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc
Confidence 358999999999864322 1222345567899999999999873 2346899999976543
No 147
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.75 E-value=1.3e-17 Score=136.84 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=95.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++++|+++||||+||||+++++.|+++|++|+++++ +++..+.+.... ..++.++++|++|++++++++ +++
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 456789999999999999999999999999988765 455555544433 246788999999999887643 344
Q ss_pred -CcEEEeccCCCCC---------CCCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 152 -VTHVICCTGTTAF---------PSRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 -~d~li~~Ag~~~~---------~~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+|++|||||.... ....+++..+.+++|+.++.++++++. .+.++||++||.....
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 151 (253)
T PRK08642 81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN 151 (253)
T ss_pred CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC
Confidence 9999999986421 111223345568999999999999772 3457999999976543
No 148
>PLN02240 UDP-glucose 4-epimerase
Probab=99.75 E-value=8.5e-18 Score=144.68 Aligned_cols=130 Identities=21% Similarity=0.188 Sum_probs=98.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH----HHHHhccc--CCCCEEEEEecCCChhccchhhh-C
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-E 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~----~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~~-~ 150 (214)
+++++|+|+||||+|+||++++++|+++|++|++++|.... .+.+.... ...++.++.+|++|++++++++- .
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 34678999999999999999999999999999999875321 12222111 12457889999999999886432 2
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
++|+|||+||.... .....+....+++|+.++.+++++++ .+.+++|++||.++|+.
T Consensus 81 ~~d~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (352)
T PLN02240 81 RFDAVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQ 138 (352)
T ss_pred CCCEEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCC
Confidence 69999999997542 22223445678999999999999885 46789999999888763
No 149
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.2e-17 Score=137.40 Aligned_cols=129 Identities=14% Similarity=0.119 Sum_probs=97.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhh-------
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------- 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~------- 149 (214)
+++|+++||||+||||++++++|+++|++|+++ .|+.++.++..+.+. +..++++.+|++|++++.+++-
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 567899999999999999999999999999875 677766655443332 3457889999999999876431
Q ss_pred -----CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 150 -----EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 -----~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... ..++.....+++|+.|+.++++++.+ ..+++|++||..++.+
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~ 153 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG 153 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC
Confidence 36999999999764211 11222345567999999999998732 3468999999887653
No 150
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.75 E-value=1.3e-17 Score=136.04 Aligned_cols=129 Identities=20% Similarity=0.211 Sum_probs=99.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+++|+++||||+|+||++++++|+++|++|+++ +|++++.+++.+.+. +.++.++.+|++|++++++.+ +
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3567899999999999999999999999999998 998877655443322 345788999999999887633 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|+|||+||...... ...+..+..+++|+.++.++++++. .+.+++|++||...+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 147 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI 147 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc
Confidence 47999999999874211 1122335567899999999888762 3457899999987654
No 151
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.74 E-value=1.3e-17 Score=138.08 Aligned_cols=124 Identities=18% Similarity=0.145 Sum_probs=95.1
Q ss_pred CCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++|+++|||| ++|||++++++|+++|++|++++|+. +..+++.+++. ..+.++++|++|++++++.+ +
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56899999999 89999999999999999999998764 44455544443 35678999999999988643 4
Q ss_pred CCCcEEEeccCCCCC-------CCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccc
Q 028043 150 EGVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVG 204 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~-------~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~ 204 (214)
+++|++|||||.... ...++++..+.+++|+.|++++++++.+ ..++||++|+.+
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~ 148 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA 148 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc
Confidence 689999999998631 1123344456689999999999987632 236899998754
No 152
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.74 E-value=8.3e-18 Score=142.85 Aligned_cols=130 Identities=18% Similarity=0.123 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC--CCCEEEEEecCCChhccchhh-----h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~ 149 (214)
.++++|+++||||+||||++++++|+++|++|++.+++. +..+++.+++. +.++.++.+|++|++++++.+ +
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999999998753 34444433332 346788999999998887632 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c--------CCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S--------SLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~--------~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||...... ...++....+++|+.|+.++++++. . ..++||++||.++..
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 160 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV 160 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence 68999999999865321 2223345677899999999998752 1 125899999987654
No 153
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.74 E-value=1.4e-17 Score=136.71 Aligned_cols=127 Identities=13% Similarity=0.115 Sum_probs=97.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+|+++||||+|+||++++++|+++|++|++++|+++..+++.+.+. +.++.++.+|++|++++++++ ++++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999999999999999877666544332 346888999999999776522 45799
Q ss_pred EEEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|||+||....... ..++..+.+++|+.|+..+++++ +.+.+++|++||.+++.+
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~ 143 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA 143 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC
Confidence 99999998653211 11223455678999999888876 235679999999876543
No 154
>PLN02583 cinnamoyl-CoA reductase
Probab=99.74 E-value=2.5e-17 Score=139.26 Aligned_cols=123 Identities=24% Similarity=0.293 Sum_probs=94.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh--HHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+|+|+||||+|+||++++++|+++|++|++++|+.+ ...+....+. ..+++++.+|++|.+++.++ +.++|.++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~-l~~~d~v~ 83 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA-LKGCSGLF 83 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH-HcCCCEEE
Confidence 3579999999999999999999999999999999643 2222222221 24688899999999998864 67899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~ 207 (214)
|.++.... ......+.+++|+.|+.++++++.+ +.++||++||.++++
T Consensus 84 ~~~~~~~~---~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~ 133 (297)
T PLN02583 84 CCFDPPSD---YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVI 133 (297)
T ss_pred EeCccCCc---ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHhee
Confidence 98764321 1122356789999999999999853 468999999997753
No 155
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.74 E-value=7.8e-18 Score=139.56 Aligned_cols=126 Identities=12% Similarity=0.121 Sum_probs=94.0
Q ss_pred CCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcCh------hHHHHHhcccCCCCEEEEEecCCChhccchhh---
Q 028043 80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--- 148 (214)
Q Consensus 80 ~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--- 148 (214)
+++|+++||||+ +|||++++++|++.|++|++..|+. +..+++.+. ...+.++++|++|++++++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHHHH
Confidence 568999999986 8999999999999999999886543 223333222 124667899999999988643
Q ss_pred ---hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 ---FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ---~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||.... + ..+.++.++.+++|+.|+..+++++.+ ..++||++||.++..
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~ 153 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR 153 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc
Confidence 4689999999997531 1 122334567789999999999997632 237899999987653
No 156
>PRK06484 short chain dehydrogenase; Validated
Probab=99.74 E-value=1.5e-17 Score=150.42 Aligned_cols=128 Identities=16% Similarity=0.159 Sum_probs=101.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
.++|+++||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++.+|++|++++++++ ++++|
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDVSDEAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 36799999999999999999999999999999999998887766554 345678999999999887643 46899
Q ss_pred EEEeccCCCCC-----CCCCCCCCCchhHHHHHHHHHHHHHhc-----cCCC-eEEEEcccccccc
Q 028043 154 HVICCTGTTAF-----PSRRWDGDNTPEKVDWEGVRNLVSALP-----SSLK-RIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~-----~~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~-~iV~vSS~~~~~~ 208 (214)
+||||||.... .....++..+.+++|+.++..+++++. .+.+ +||++||.++..+
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~ 147 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA 147 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC
Confidence 99999997421 112233456778999999999998762 2333 8999999887653
No 157
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.74 E-value=1.7e-17 Score=136.81 Aligned_cols=123 Identities=14% Similarity=0.149 Sum_probs=94.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++|+++||||+||||++++++|+++|++|++++|++...++..+.+. ..++++|++|++++++.+ ++++|
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPTDVTDEDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 568999999999999999999999999999999999877666544332 257889999999887643 25799
Q ss_pred EEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccc
Q 028043 154 HVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV 205 (214)
Q Consensus 154 ~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~ 205 (214)
+||||||...... ...+.....+++|+.|+.++++++. .+.++||++||..+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~ 143 (255)
T PRK06057 82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVA 143 (255)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhh
Confidence 9999999754211 1112345667899999998888652 34578999999754
No 158
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.74 E-value=1.1e-17 Score=144.26 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=92.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEE-EEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI 156 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li 156 (214)
+|+|+||||+|+||++++++|+++|+++++ ++|.... ...+.......++.++.+|++|.++++++ +. ++|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARV-FTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHH-HhhcCCCEEE
Confidence 378999999999999999999999998554 4543221 11111111123577889999999998874 44 599999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc----------CCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~----------~~~~iV~vSS~~~~~~ 208 (214)
|+||.... ...++.....+++|+.|+.++++++.+ +.+++|++||.++|+.
T Consensus 80 h~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~ 140 (355)
T PRK10217 80 HLAAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGD 140 (355)
T ss_pred ECCcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCC
Confidence 99997642 223345567889999999999998843 3569999999988873
No 159
>PRK08264 short chain dehydrogenase; Validated
Probab=99.74 E-value=2.6e-17 Score=134.04 Aligned_cols=126 Identities=25% Similarity=0.226 Sum_probs=98.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTH 154 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~ 154 (214)
+.+.+|+++||||+|+||++++++|+++|+ +|++++|+.++.++ .+.++.++.+|++|.+++++.. ++++|+
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 76 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----LGPRVVPLQLDVTDPASVAAAAEAASDVTI 76 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-----cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 345678999999999999999999999999 99999999876654 2456889999999999988643 346999
Q ss_pred EEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
|||+||...... ...++....+++|+.++.++++++. .+.+++|++||..++.+
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~ 139 (238)
T PRK08264 77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN 139 (238)
T ss_pred EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC
Confidence 999999832111 2223345567899999999998762 35678999999877653
No 160
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.74 E-value=2.5e-17 Score=136.25 Aligned_cols=125 Identities=22% Similarity=0.256 Sum_probs=94.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc--CCCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+|+++||||+||||++++++|+++|++|++++|+.+..+ ..+.+ .+.++.++.+|++|++++++.+ +++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEK-LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56799999999999999999999999999999999875322 22111 1345778999999999887643 457
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV 205 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~ 205 (214)
+|+||||||...... ...+..++.+++|+.++.++++++. .+.++||++||..+
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 144 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG 144 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 999999999854221 1112234467899999999998762 24568999999766
No 161
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.74 E-value=1.9e-17 Score=136.87 Aligned_cols=127 Identities=20% Similarity=0.250 Sum_probs=98.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++++||||+||||++++++|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++++++ ++++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999999999877665443322 346788999999999887643 34799
Q ss_pred EEEeccCCCCCCCC----CCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~~----~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
+||||||....... +++...+.+++|+.++.++++++. ...+++|++||..++.+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~ 143 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG 143 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC
Confidence 99999997653221 222234567999999999998762 34578999999887654
No 162
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.74 E-value=2.6e-17 Score=143.38 Aligned_cols=126 Identities=13% Similarity=-0.007 Sum_probs=95.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+.-++|+|+||||+|+||++++++|.++|++|++++|....... .. ....+++.+|++|.+.+.. ++.++|+|||
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~---~~-~~~~~~~~~Dl~d~~~~~~-~~~~~D~Vih 91 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS---ED-MFCHEFHLVDLRVMENCLK-VTKGVDHVFN 91 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc---cc-cccceEEECCCCCHHHHHH-HHhCCCEEEE
Confidence 44467899999999999999999999999999999986432111 00 1125678899999988775 3568999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+..........+....+..|+.++.+++++++ .+.+++|++||.++|+.
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~ 143 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPE 143 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCC
Confidence 9986531111112333456789999999999885 47889999999988874
No 163
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.74 E-value=2e-17 Score=136.51 Aligned_cols=130 Identities=16% Similarity=0.118 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcC-----------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRD-----------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 79 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~-----------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
.+++|+++||||+| |||++++++|+++|++|++++|+ ......+.+.+. +.+++++.+|++|+++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 35679999999995 89999999999999999999987 211111222111 3458889999999998
Q ss_pred cchhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++++ ++++|+||||||...... ..+++.+..+++|+.|+.++++++. ...++||++||..++.+
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 160 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP 160 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence 77633 367999999999754221 1223345567899999999998772 23468999999887654
No 164
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.74 E-value=2.2e-17 Score=135.36 Aligned_cols=123 Identities=17% Similarity=0.230 Sum_probs=93.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|++++|+.+ ..+.+...+. +.++.++.+|++|++++++.+ ++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 56799999999999999999999999999999999753 3333322221 345788999999999887633 25
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGV 205 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~ 205 (214)
++|+||||||..... ..++...+++|+.|+.++++++.+ ..+++|++||..+
T Consensus 84 ~~d~vi~~ag~~~~~---~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~ 138 (248)
T PRK07806 84 GLDALVLNASGGMES---GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA 138 (248)
T ss_pred CCcEEEECCCCCCCC---CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh
Confidence 799999999865321 123455678999999999998843 2358999999654
No 165
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.74 E-value=1.9e-17 Score=135.47 Aligned_cols=126 Identities=16% Similarity=0.197 Sum_probs=92.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++|+++||||+||||++++++|+++|++|++.. ++....++..+++. +..+..+.+|++|.+++++++ +++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999988854 44444333322221 335677899999999887643 357
Q ss_pred CcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
+|+||||||..... ...+++..+.+++|+.++..+++++ +.+.++||++||..+.
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 144 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ 144 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc
Confidence 99999999986421 1223344667799999988887765 2345799999998654
No 166
>PRK05599 hypothetical protein; Provisional
Probab=99.74 E-value=2.2e-17 Score=135.87 Aligned_cols=125 Identities=16% Similarity=0.167 Sum_probs=94.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
|+++||||++|||++++++|+ +|++|++++|++++++++.+++. ...+.++.+|++|++++++++ ++++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 59999999999988877655543 224778999999999988643 46899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cC-CCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~-~~~iV~vSS~~~~~~ 208 (214)
++|||||...... ...+...+..++|+.+..++++++ . .+ .++||++||.++..+
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~ 143 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA 143 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC
Confidence 9999999864221 111122344578888888766544 2 22 478999999877543
No 167
>PLN00015 protochlorophyllide reductase
Probab=99.74 E-value=1.6e-17 Score=141.15 Aligned_cols=121 Identities=17% Similarity=0.176 Sum_probs=94.6
Q ss_pred EEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcEEE
Q 028043 86 LVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHVI 156 (214)
Q Consensus 86 lITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~li 156 (214)
+||||++|||++++++|+++| ++|++++|+.++.+++.+++. ...+.++.+|++|.+++++++ ++++|+||
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 999999999887776655443 345778899999999987643 35799999
Q ss_pred eccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh----cc-C--CCeEEEEcccccc
Q 028043 157 CCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PS-S--LKRIVLVSSVGVT 206 (214)
Q Consensus 157 ~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~----~~-~--~~~iV~vSS~~~~ 206 (214)
||||+.... ..+.+..+..+++|+.|++++++++ +. + .++||++||.+++
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 999985321 1223344667899999999988765 22 2 4799999998764
No 168
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.73 E-value=1.7e-17 Score=154.36 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=97.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc-cchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-LDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~-v~~~~~~~~d~li~ 157 (214)
.++|+|+||||+|+||++++++|+++ |++|++++|+........ ...+++++.+|++|.+. +++ ++.++|+|||
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~---~~~~~~~~~gDl~d~~~~l~~-~l~~~D~ViH 388 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL---GHPRFHFVEGDISIHSEWIEY-HIKKCDVVLP 388 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc---CCCceEEEeccccCcHHHHHH-HhcCCCEEEE
Confidence 35789999999999999999999985 799999999775433322 13468899999998665 444 4678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+||.... .....++...+++|+.++.+++++++...+++|++||.++|+.
T Consensus 389 lAa~~~~-~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~ 438 (660)
T PRK08125 389 LVAIATP-IEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGM 438 (660)
T ss_pred CccccCc-hhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCC
Confidence 9997652 2223344567799999999999999653489999999998874
No 169
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.73 E-value=2.7e-17 Score=152.59 Aligned_cols=131 Identities=21% Similarity=0.281 Sum_probs=103.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|+++.++++.+++. +.++.++.+|++|.+++++++ +
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999988776654432 346888999999999888643 4
Q ss_pred CCCcEEEeccCCCCCCC--CC---CCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS--RR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~--~~---~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... .. +++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 515 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN 515 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC
Confidence 57999999999753211 11 2234567799999999988865 235579999999988754
No 170
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.73 E-value=1.2e-17 Score=141.78 Aligned_cols=130 Identities=10% Similarity=0.084 Sum_probs=93.9
Q ss_pred CCCCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----------CC----CEEEEEecC--
Q 028043 78 PASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----------EE----TLQVCKGDT-- 138 (214)
Q Consensus 78 ~~~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~----~~~~v~~Di-- 138 (214)
++++||+++|||| ++|||+++|++|++.|++|++ +|+.++++++...+. .. ....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4578999999999 799999999999999999998 777666555432221 01 135688899
Q ss_pred CChh------------------ccchhh------hCCCcEEEeccCCCC---CC--CCCCCCCCchhHHHHHHHHHHHHH
Q 028043 139 RNPK------------------DLDPAI------FEGVTHVICCTGTTA---FP--SRRWDGDNTPEKVDWEGVRNLVSA 189 (214)
Q Consensus 139 ~d~~------------------~v~~~~------~~~~d~li~~Ag~~~---~~--~~~~~~~~~~~~vNv~g~~~l~~a 189 (214)
++++ ++++++ ++++|+||||||... .+ ..+++++.+.+++|+.|++.++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 4444 344322 578999999997532 11 233455677889999999999987
Q ss_pred hcc---CCCeEEEEcccccccc
Q 028043 190 LPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 190 ~~~---~~~~iV~vSS~~~~~~ 208 (214)
+.+ ..++||++||.++...
T Consensus 164 ~~p~m~~~G~II~isS~a~~~~ 185 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASERI 185 (303)
T ss_pred HHHHHhcCCEEEEEechhhcCC
Confidence 732 2379999999877543
No 171
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.73 E-value=2.4e-17 Score=138.99 Aligned_cols=131 Identities=12% Similarity=0.090 Sum_probs=99.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.+ ..+...+.+. +.++.++.+|++|.+++++.+
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999998753 2333322222 345778999999999887643
Q ss_pred hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||..... ...+++....+++|+.|+.++++++.+ ..++||++||.+++..
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~ 188 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG 188 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC
Confidence 35799999999975421 122233456789999999999998743 3368999999888754
No 172
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.73 E-value=3.4e-17 Score=134.11 Aligned_cols=128 Identities=20% Similarity=0.253 Sum_probs=97.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|+++.+ +++..++..+.+. +.++.++.+|++|++++.+++ ++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45799999999999999999999999999987654 4555544433332 345788999999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
.+|+||||||...... ..++...+.+++|+.++.++++++. ...+++|++||..+..
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 148 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA 148 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC
Confidence 6999999999864321 2224456677999999999999773 3457999999987653
No 173
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.73 E-value=2e-17 Score=136.24 Aligned_cols=130 Identities=17% Similarity=0.167 Sum_probs=100.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++.+|+++||||+|+||++++++|+++|++|++++|++++++++.+.+. ..++.++.+|+++++++++.+ ++
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999999999999999988776654432 346788999999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC--------CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS--------LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~--------~~~iV~vSS~~~~~~ 208 (214)
++|++|||||...... ...++....+++|+.|+.++++++. .. .+++|++||..++.+
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 159 (258)
T PRK06949 86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV 159 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence 7999999999754211 1123345567899999999888652 11 358999999887643
No 174
>PRK12743 oxidoreductase; Provisional
Probab=99.73 E-value=2.9e-17 Score=135.62 Aligned_cols=127 Identities=14% Similarity=0.139 Sum_probs=95.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++|+++||||+||||++++++|+++|++|+++.+ +.+..+++.+++. +.++.++.+|++|.+++++++ +++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999999998865 4444444433322 346888999999999887633 457
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc------CCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~------~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ..+++....+++|+.|+.++++++.+ ..++||++||.....
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~ 145 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT 145 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC
Confidence 999999999865221 22234456779999999999987621 136899999987644
No 175
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1.9e-17 Score=135.20 Aligned_cols=130 Identities=13% Similarity=0.183 Sum_probs=96.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++++|+++||||+|+||++++++|+++|++|+++.|+.+ ..+++.+.+. +.++.++.+|++|++++++++ +
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999988877543 3333332221 346788999999999887743 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++..+.+++|+.|+.++++++.+ ..++||++||.++..+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~ 146 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP 146 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC
Confidence 57999999999754211 12223455678999999999987732 3368999999876543
No 176
>PRK12742 oxidoreductase; Provisional
Probab=99.73 E-value=4.2e-17 Score=132.65 Aligned_cols=124 Identities=18% Similarity=0.233 Sum_probs=94.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
+++|+++||||+||||++++++|+++|++|+++.| +++..+++.++. ++.++.+|++|.+++.+.+ ++++|++|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---GATAVQTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---CCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence 56899999999999999999999999999988866 455555543332 3567889999998877643 45799999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
||||...... .+.++.++.+++|+.|+..+++.+.+ ..++||++||..+.
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~ 136 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD 136 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 9999864211 22234567789999999999876632 34699999998763
No 177
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.73 E-value=2e-17 Score=135.07 Aligned_cols=127 Identities=21% Similarity=0.239 Sum_probs=98.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
++++|+++||||+|+||+++++.|+++|++|++++|++++.+++.+.. +..++.+|++|.+++++.+ .+++|+||
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET---GCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 457799999999999999999999999999999999988776655432 3567889999998887643 24699999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----C-CCeEEEEcccccccc
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----~-~~~iV~vSS~~~~~~ 208 (214)
||||...... ...++..+.+.+|+.++.++++++.+ + .++||++||.+++.+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 143 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG 143 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC
Confidence 9999865321 12233455567999999999987722 2 378999999877654
No 178
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.73 E-value=2.6e-17 Score=144.50 Aligned_cols=110 Identities=20% Similarity=0.219 Sum_probs=88.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.++..... ...+..+.+|++|++++++ .++++|++|||
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~-~~~v~~v~~Dvsd~~~v~~-~l~~IDiLInn 252 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE-DLPVKTLHWQVGQEAALAE-LLEKVDILIIN 252 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCCeEEEEeeCCCHHHHHH-HhCCCCEEEEC
Confidence 457899999999999999999999999999999999887665432211 2346778999999999886 47899999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~ 190 (214)
||.........++..+.+++|+.|+.++++++
T Consensus 253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~ 284 (406)
T PRK07424 253 HGINVHGERTPEAINKSYEVNTFSAWRLMELF 284 (406)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99865333333445677899999999999976
No 179
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.73 E-value=3.4e-17 Score=135.12 Aligned_cols=128 Identities=15% Similarity=0.202 Sum_probs=98.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+|+||++++++|+++|++|++++|+++..+++.+.....++.++.+|++|++++++++ ++++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3577999999999999999999999999999999999877766554443335788999999999887633 3589
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----cc-CC-CeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PS-SL-KRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~~-~~-~~iV~vSS~~~~ 206 (214)
|+|||+||...... ...+.....+++|+.++.++++++ +. +. ++|+++||.++.
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~ 151 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR 151 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc
Confidence 99999999863211 112234566789999999988876 22 33 578888887653
No 180
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.73 E-value=2.3e-17 Score=134.46 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=92.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
+|+++||||+||||++++++|+++|++|++++|+++...+..+ ..++.++.+|++|++++++.+ ++++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR---QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 5799999999999999999999999999999998765432222 123678899999999887633 4579999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c-C--CCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S-S--LKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~-~--~~~iV~vSS~~~~~ 207 (214)
|||||...... ..+++.++.+++|+.++..+++++. . + .++||++||..+..
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~ 140 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK 140 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc
Confidence 99999753211 1223446677999999998877662 2 2 46899999987643
No 181
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=2e-17 Score=137.35 Aligned_cols=126 Identities=10% Similarity=0.135 Sum_probs=93.8
Q ss_pred CCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcC---hhHHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRD---PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++|||| ++|||++++++|++.|++|++++|. .+.++++.++.. ....+++|++|++++++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHHH
Confidence 46799999996 6899999999999999999988654 344444433332 2346889999999998744
Q ss_pred hCCCcEEEeccCCCCCC--------CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFP--------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~--------~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||..... ..+.+++...+++|+.|+..+++++.+ ..++||++||.++..
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~ 151 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER 151 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 57899999999985421 112233456679999999999987732 236899999987643
No 182
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.73 E-value=1.8e-17 Score=136.32 Aligned_cols=127 Identities=15% Similarity=0.172 Sum_probs=94.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.|+++||||+||||++++++|+++|++|++++|+.. ..++..+.+. ..++.++.+|++|++++.+++ ++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999998643 3333222221 346888999999999877632 3579
Q ss_pred cEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc-----c-C-----CCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----S-S-----LKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~-----~-~-----~~~iV~vSS~~~~~~ 208 (214)
|++|||||...... ...+...+.+++|+.|+.++++++. . + .++||++||..+..+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 153 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV 153 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC
Confidence 99999999754211 1223345567899999999988762 1 1 457999999887543
No 183
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.73 E-value=3.5e-17 Score=133.74 Aligned_cols=129 Identities=20% Similarity=0.201 Sum_probs=97.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC----hhHHHHHhcccC--CCCEEEEEecCCChhccchhh-----
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~----~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
+++|+++||||+||||++++++|+++|++|++++|. .+..+++.+++. +..+.++.+|++|.+++++.+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999997653 344443333222 346788999999999888643
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc------cCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~------~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ..+++....+++|+.++.++++++. .+.+++|++||.+++.+
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 153 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG 153 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC
Confidence 357999999999865211 2223345567899999999998774 24578999999887643
No 184
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.73 E-value=7.8e-17 Score=132.99 Aligned_cols=122 Identities=33% Similarity=0.440 Sum_probs=95.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhhh-CCCcEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF-EGVTHV 155 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~~-~~~d~l 155 (214)
.+..+|+|+||||+|+||++++++|+++|++|+++.|++++....... ..+++++.+|++|. +.+.+. + .++|+|
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~l~~~-~~~~~d~v 89 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ--DPSLQIVRADVTEGSDKLVEA-IGDDSDAV 89 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc--CCceEEEEeeCCCCHHHHHHH-hhcCCCEE
Confidence 344578999999999999999999999999999999998776543321 24688999999983 555543 5 589999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
||++|.... . +....+++|+.|+.+++++++ .+.++||++||.++|+
T Consensus 90 i~~~g~~~~-~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g 137 (251)
T PLN00141 90 ICATGFRRS-F----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNG 137 (251)
T ss_pred EECCCCCcC-C----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccC
Confidence 999986431 1 122335789999999999985 4778999999998775
No 185
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.72 E-value=5.3e-18 Score=133.98 Aligned_cols=126 Identities=21% Similarity=0.149 Sum_probs=100.7
Q ss_pred CCEEEEEcCc-hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------hCCCc
Q 028043 82 SKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~~~~d 153 (214)
.|+|+|||++ ||||.+++++|.++|+.|+++.|+.+....+..+ .++...+.|+++++++.... .+.+|
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~---~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ---FGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh---hCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 4789999865 8999999999999999999999999988876532 35788999999999887622 45799
Q ss_pred EEEeccCCCCC-CC--CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccccCC
Q 028043 154 HVICCTGTTAF-PS--RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 154 ~li~~Ag~~~~-~~--~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~~~ 210 (214)
+||||||..-. |. ......++.+++|+.|..++++++. ...+.||+++|..++-+.+
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP 147 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence 99999998632 22 2233457788999999999999874 3457999999999865543
No 186
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.72 E-value=5.4e-17 Score=134.28 Aligned_cols=130 Identities=19% Similarity=0.178 Sum_probs=95.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+|+||++++++|+++|++|+++.|+. +..+.+.+.+. +.++.++.+|++|.+++++.+
T Consensus 3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999988854 33333333222 345778999999999887633
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----cc-C-CCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS-S-LKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~-~-~~~iV~vSS~~~~~ 207 (214)
++++|++|||||...... ...+..++.+++|+.++..+++++ +. + .++||++||.....
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~ 150 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI 150 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC
Confidence 357999999999764221 111233456799999988777654 22 2 46899999987654
No 187
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.72 E-value=5.7e-17 Score=132.76 Aligned_cols=129 Identities=17% Similarity=0.203 Sum_probs=96.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++++||||+|+||+++++.|+++|++|++++|++++.++..+++. +.++.++++|++|++++++.+ +++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999999877666544332 346788999999998876532 257
Q ss_pred CcEEEeccCCCCCC------------CCCCCCCCchhHHHHHHHHHHHHHh-----cc-CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFP------------SRRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~------------~~~~~~~~~~~~vNv~g~~~l~~a~-----~~-~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||..... ...++.....+++|+.|+.++++++ +. ..++||++||.+.++.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~ 157 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN 157 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC
Confidence 99999999975421 0111223446688999998887754 12 3357999999876653
No 188
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.72 E-value=3.7e-17 Score=134.30 Aligned_cols=125 Identities=18% Similarity=0.202 Sum_probs=95.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
|+++||||+|+||++++++|++.|++|++++|+++..+++.+.+. +.++.++.+|++|++++++++ ++++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999999999999877665544332 345788999999999887643 457999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c-C-CCeEEEEccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S-S-LKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~-~-~~~iV~vSS~~~~~ 207 (214)
||||||...... ...+..++.+++|+.++..+++++. . + .++||++||..+..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 142 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE 142 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC
Confidence 999999864211 2223345668899999998877652 2 2 36899999987654
No 189
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.72 E-value=4.8e-17 Score=140.22 Aligned_cols=125 Identities=18% Similarity=0.172 Sum_probs=92.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~ 158 (214)
|+|+||||+|+||++++++|+++|++ |+++++.. ...+.........+++++.+|++|.+++++++-+ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 47999999999999999999999986 55555532 1222222111134577899999999999875322 59999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc----------CCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~----------~~~~iV~vSS~~~~~~ 208 (214)
||.... ...+......+++|+.|+.++++++++ +.+++|++||.++|+.
T Consensus 81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~ 139 (352)
T PRK10084 81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGD 139 (352)
T ss_pred CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCC
Confidence 997642 222344567889999999999998853 3468999999988874
No 190
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.72 E-value=4.4e-17 Score=135.76 Aligned_cols=125 Identities=15% Similarity=0.139 Sum_probs=95.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
|+++||||+||||++++++|+++|++|++++|+++..++..+++. .....++.+|++|++++++.. ++++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999999999999877665543332 223456789999998877532 45799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----c-CCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----S-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~-~~~~iV~vSS~~~~~ 207 (214)
+||||||...... ..+++....+++|+.|+.++++++. . ..++||++||..+..
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~ 143 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV 143 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC
Confidence 9999999754211 2333446678999999999999762 1 246899999987643
No 191
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.72 E-value=4.8e-17 Score=134.67 Aligned_cols=129 Identities=16% Similarity=0.085 Sum_probs=98.1
Q ss_pred CCCCCEEEEEcCch-HHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGSG-GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+.+|+++||||+| |||+++++.|+++|++|++++|+.+++++..+.+. ..++.++++|++|++++++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45679999999996 89999999999999999999999877665544332 235788999999998887633
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...++..+.+++|+.++..+++++. .. .++||++||..++.
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~ 162 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR 162 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC
Confidence 367999999999754211 1223345567899999999888762 22 46899999987654
No 192
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.72 E-value=4.7e-17 Score=132.15 Aligned_cols=119 Identities=14% Similarity=0.114 Sum_probs=93.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---hCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~~~~d~li~~A 159 (214)
|+++||||+||||++++++|+++|++|++++|+.++++++.+.+ ++.++++|++|++++++++ .+++|++||||
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~a 77 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL---DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVP 77 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECC
Confidence 36999999999999999999999999999999998877665433 3567899999999988643 13699999999
Q ss_pred CCCCC---CC-----CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccc
Q 028043 160 GTTAF---PS-----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVG 204 (214)
Q Consensus 160 g~~~~---~~-----~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~ 204 (214)
|.... +. ...++..+.+++|+.++.++++++.+ ..++||++||.+
T Consensus 78 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 133 (223)
T PRK05884 78 APSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN 133 (223)
T ss_pred CccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC
Confidence 85321 10 01234567789999999999998732 237999999976
No 193
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.72 E-value=2.9e-17 Score=137.15 Aligned_cols=126 Identities=21% Similarity=0.285 Sum_probs=102.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----hHHHHHhccc-CCCCEEEEEecCCChhccchhhhC--CCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFE--GVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~v~~Di~d~~~v~~~~~~--~~d~ 154 (214)
+++||||||+|+||++.+.+|+++|+.|+++|.-. +.+....... ++..+.++++|+.|.+.+++ +|. .+|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~k-vF~~~~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEK-LFSEVKFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHH-HHhhcCCce
Confidence 57899999999999999999999999999998632 2232222222 14679999999999999998 454 6999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|+|.|+...+. ...+++..++..|+.|+.++++.++ .+++.+|+.||..+||..
T Consensus 81 V~Hfa~~~~vg-eS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p 135 (343)
T KOG1371|consen 81 VMHFAALAAVG-ESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLP 135 (343)
T ss_pred EEeehhhhccc-hhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCc
Confidence 99999988743 3335667888999999999999995 478999999999999854
No 194
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.72 E-value=3.7e-17 Score=138.84 Aligned_cols=118 Identities=27% Similarity=0.362 Sum_probs=96.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|+++....+. ..+++++.+|++|.+++++ ++.++|+|||+|+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~l~~-~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE----GLDVEIVEGDLRDPASLRK-AVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc----cCCceEEEeeCCCHHHHHH-HHhCCCEEEEeceec
Confidence 47999999999999999999999999999999876543321 3357889999999999987 467899999999864
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.. ...+....+++|+.++.+++++++ .+.+++|++||.++|+.
T Consensus 76 ~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~ 119 (328)
T TIGR03466 76 RL---WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGV 119 (328)
T ss_pred cc---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCc
Confidence 31 123345678999999999999884 46789999999988874
No 195
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.72 E-value=6.3e-17 Score=132.60 Aligned_cols=126 Identities=20% Similarity=0.150 Sum_probs=92.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+|+++||||+||||+++++.|+++|++|+++. |+++..++..+.+. +.++.++++|++|++++++++ ++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999998765 56555554433322 346888999999999887633 3579
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh-c----cC---CCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-P----SS---LKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~-~----~~---~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...++....+++|+.++.++++++ + .+ .++||++||.++..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~ 148 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL 148 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC
Confidence 99999999764211 122233456789999998888654 1 11 24699999987653
No 196
>PLN02686 cinnamoyl-CoA reductase
Probab=99.72 E-value=9e-17 Score=139.88 Aligned_cols=125 Identities=18% Similarity=0.260 Sum_probs=96.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-------CCCEEEEEecCCChhccchhhhC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-------EETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
..+++|+|+||||+|+||++++++|+++|++|+++.|+.+..+.+..... ..++.++.+|++|.+++.+ ++.
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE-AFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH-HHH
Confidence 34678999999999999999999999999999999998766544322100 1257889999999999887 467
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVG 204 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~ 204 (214)
++|.+||+|+....... ........++|+.++.+++++++. +++++|++||.+
T Consensus 128 ~~d~V~hlA~~~~~~~~-~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~ 182 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGL-SGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLL 182 (367)
T ss_pred hccEEEecCeeeccccc-ccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence 89999999997642211 011134468899999999999853 689999999974
No 197
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.72 E-value=7.2e-17 Score=133.41 Aligned_cols=129 Identities=12% Similarity=0.049 Sum_probs=94.0
Q ss_pred CCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcC-----------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRD-----------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 79 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~-----------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
.+++|+++||||+| |||++++++|+++|++|++++|. .+...++.+.+. +..+.++++|++|.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 36789999999994 99999999999999999987542 222222222222 3467789999999998
Q ss_pred cchhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
+++++ ++++|++|||||...... ...++.+..+++|+.|+..+.+++ + ...++||++||.++..
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 160 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG 160 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence 88643 457999999999764221 222334556899999999887655 2 2356999999988754
No 198
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.71 E-value=7.5e-17 Score=138.07 Aligned_cols=125 Identities=22% Similarity=0.248 Sum_probs=94.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH---hcccCCCCEEEEEecCCChhccchhhh-CCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~ 158 (214)
|+|+||||+|+||++++++|+++|++|++++|........ .....+.++.++.+|++|.+.+.+++- .++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 4799999999999999999999999999987643221111 111223456788999999998886432 269999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
||..... ...+.....+++|+.++.+++++++ .+.++||++||.++|+.
T Consensus 81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~ 130 (338)
T PRK10675 81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGD 130 (338)
T ss_pred Ccccccc-chhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCC
Confidence 9976422 1223345678999999999999985 47789999999988763
No 199
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.71 E-value=6.2e-17 Score=135.44 Aligned_cols=120 Identities=17% Similarity=0.158 Sum_probs=94.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh-----hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~~~~d~ 154 (214)
+|+++|||| ||||++++++|+ +|++|++++|++++++++.+++. +.++.++++|++|++++++++ ++++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 578999998 699999999996 89999999999877766544432 335778999999999887643 357999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
||||||.... .+++...+++|+.|+.++++++.+ ..+++|++||.++..
T Consensus 80 li~nAG~~~~----~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~ 131 (275)
T PRK06940 80 LVHTAGVSPS----QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHR 131 (275)
T ss_pred EEECCCcCCc----hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEeccccc
Confidence 9999997531 134567889999999999997732 235788899887653
No 200
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.71 E-value=4.6e-17 Score=135.54 Aligned_cols=132 Identities=23% Similarity=0.277 Sum_probs=107.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h--
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F-- 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~-- 149 (214)
.+..+|.|+|||+.+|.|+.+|++|.++|++|++.+..++..+++..+...++...++.|++++++++++. +
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 34567999999999999999999999999999999988888777766654677888999999999999854 1
Q ss_pred CCCcEEEeccCCCCC-CCCCCC---CCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccccccccC
Q 028043 150 EGVTHVICCTGTTAF-PSRRWD---GDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~-~~~~~~---~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~~ 209 (214)
+++-.||||||+... ...+|. +..+.+++|+.|+..+++++ ++..+|||++||..+.-+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~ 172 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL 172 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence 268899999997653 234443 44667799999999999887 4567899999999885443
No 201
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.71 E-value=1.1e-16 Score=140.41 Aligned_cols=123 Identities=24% Similarity=0.359 Sum_probs=95.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH---hccc-CCCCEEEEEecCCChhccchhhhC---C
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQ-DEETLQVCKGDTRNPKDLDPAIFE---G 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~-~~~~~~~v~~Di~d~~~v~~~~~~---~ 151 (214)
+.++++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+.. ...+++++.+|++|++++++++-+ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 34678999999999999999999999999999999987643210 0000 124688999999999999875433 6
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
+|+||||+|.... .....+++|+.++.+++++++ .+.+++|++||.+++.
T Consensus 137 ~D~Vi~~aa~~~~------~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~ 187 (390)
T PLN02657 137 VDVVVSCLASRTG------GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK 187 (390)
T ss_pred CcEEEECCccCCC------CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC
Confidence 9999999985321 122346889999999999885 5788999999998764
No 202
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.71 E-value=6e-17 Score=132.64 Aligned_cols=127 Identities=14% Similarity=0.066 Sum_probs=93.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+|+++||||+|+||++++++|+++|++|++.. |+++..++..+.+. +..+.++.+|++|.+++++++ ++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999988876 44454444333222 345778999999999888643 3579
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhcc----C----CCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS----S----LKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~----~----~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ..+++....+++|+.++.++++++.+ . .++||++||.++...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 149 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG 149 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC
Confidence 99999999864211 12233456789999999998887621 1 247999999876543
No 203
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.71 E-value=9.9e-17 Score=130.68 Aligned_cols=129 Identities=22% Similarity=0.290 Sum_probs=94.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++.+|+++||||+|+||+++++.|+++|++|+++.|+... .+...+++. +.++.++.+|++|.+++.+++ +
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999888886543 333322221 346788899999999887633 2
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|+|||+||...... ...+...+.+++|+.++.++++++. .+.+++|++||.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~ 147 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM 147 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc
Confidence 47999999999865321 1112234556789999999988773 2456899999986543
No 204
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.71 E-value=1e-16 Score=130.49 Aligned_cols=129 Identities=22% Similarity=0.242 Sum_probs=96.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+|+||++++++|+++|++|+++.|+... .+.+..... +.++.++.+|++|++++++.+ ++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999999998887775443 333322221 346888999999999888643 25
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|++||+||...... ...+.....+++|+.++.++++++ +.+.+++|++||..++..
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~ 149 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG 149 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC
Confidence 7999999999654222 122233556789999999999876 235789999999887644
No 205
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.71 E-value=2.5e-17 Score=131.27 Aligned_cols=127 Identities=24% Similarity=0.257 Sum_probs=99.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc---ccCCCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++||.+++||+.||||++++++|+++|..+.+++.+.|+.+..++ ..+...+.++++|+++..++++++ |
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999888887777655433 333567889999999999988744 6
Q ss_pred CCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHH----Hh-c-c--CCCeEEEEccccccccCC
Q 028043 150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS----AL-P-S--SLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~----a~-~-~--~~~~iV~vSS~~~~~~~~ 210 (214)
+.+|++||+||+.. + .+++..+.+|+.|..+-+. .+ + . ..+-||++||..+..|-+
T Consensus 82 g~iDIlINgAGi~~--d---kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p 145 (261)
T KOG4169|consen 82 GTIDILINGAGILD--D---KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP 145 (261)
T ss_pred CceEEEEccccccc--c---hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccc
Confidence 78999999999875 2 2456678999888666544 33 2 2 134799999999877644
No 206
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.71 E-value=5.8e-17 Score=131.36 Aligned_cols=123 Identities=14% Similarity=0.182 Sum_probs=97.0
Q ss_pred EEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh--hCCCcEEEeccCCC
Q 028043 86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI--FEGVTHVICCTGTT 162 (214)
Q Consensus 86 lITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~Ag~~ 162 (214)
+||||+||||++++++|+++|++|++++|++++.++..+.+. +.+++++.+|++|++++++++ .+++|+||||||..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 699999999999999999999999999999877766544332 346788999999999998743 35689999999986
Q ss_pred CCCC---CCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 163 AFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.... ...++..+.+++|+.++.+++++.. .+.++||++||.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~ 130 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP 130 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC
Confidence 4221 1223446677999999999999553 35679999999988654
No 207
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.71 E-value=9.4e-17 Score=132.46 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=98.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+|+||++++++|+++|++ |++++|++++.+...+.+. +..+.++.+|++|++++++.+ ++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 56799999999999999999999999999 9999998776654433221 345778899999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c-C-CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S-S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~-~-~~~iV~vSS~~~~~~ 208 (214)
++|++|||||...... ...+.....+++|+.|+.++++++. . + .+++|++||.++++.
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~ 150 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG 150 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC
Confidence 7999999999764221 1122234567899999999988762 1 2 368999999987654
No 208
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=9.1e-17 Score=131.77 Aligned_cols=130 Identities=18% Similarity=0.183 Sum_probs=96.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCC--Chhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTR--NPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~--d~~~v~~~~---- 148 (214)
..+++|+++||||+|+||.+++++|++.|++|++++|+.++.+++.+++. ..++.++.+|++ +++++++..
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999877665544332 235667788886 555544321
Q ss_pred --hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 149 --FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||..... ....+...+.+++|+.|+.++++++. .+.++||++||..+..
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~ 157 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ 157 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC
Confidence 46899999999975421 11223345667899999999988762 3567999999987653
No 209
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.71 E-value=1e-16 Score=131.61 Aligned_cols=124 Identities=17% Similarity=0.097 Sum_probs=96.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+.+|+++||||+|+||++++++|+++|++|++++|+. ... .+..+.++++|++|++++++.+ +++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ-----EDYPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hhh-----cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 446789999999999999999999999999999999987 111 1345788999999999888743 356
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ..+++....+++|+.++.++++++. .+.++||++||.++..+
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~ 141 (252)
T PRK08220 77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP 141 (252)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC
Confidence 999999999864221 1223445677899999999998762 34578999999876543
No 210
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.71 E-value=3.3e-17 Score=138.71 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=86.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag~ 161 (214)
|+||||||+|+||++++++|+++| +|++++|... .+.+|++|.+.+++.+-+ ++|+|||+|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------cccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 479999999999999999999999 7988887531 245899999999874322 69999999998
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
.... ....++...+.+|+.|+.+++++++....++|++||..+|+.
T Consensus 65 ~~~~-~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~ 110 (299)
T PRK09987 65 TAVD-KAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPG 110 (299)
T ss_pred CCcc-hhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECC
Confidence 7632 222344556789999999999999653358999999998864
No 211
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.71 E-value=4.5e-17 Score=132.44 Aligned_cols=121 Identities=13% Similarity=0.087 Sum_probs=92.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~~~~~d~li~ 157 (214)
.+++|+++||||+||||++++++|+++|++|++++|++.... ..++.++.+|++|+ +.+.+ .++++|+|||
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~~~-~~~~id~lv~ 73 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-------SGNFHFLQLDLSDDLEPLFD-WVPSVDILCN 73 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-------CCcEEEEECChHHHHHHHHH-hhCCCCEEEE
Confidence 357899999999999999999999999999999999764311 23577899999987 33332 2578999999
Q ss_pred ccCCCCC--CC--CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 158 CTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 158 ~Ag~~~~--~~--~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|||.... +. ...++..+.+++|+.|+.++++++. .+.++||++||.+++.
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 132 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV 132 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc
Confidence 9997531 11 1223345678999999999998762 2456899999987754
No 212
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.5e-16 Score=128.36 Aligned_cols=125 Identities=16% Similarity=0.173 Sum_probs=93.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~ 158 (214)
++|+++||||+|+||++++++|+++ ++|++++|+.+..+++.+.. .+++++++|++|++++++++ ++++|+|||+
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL--PGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh--ccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 3589999999999999999999999 99999999987766554322 35778999999999988743 2369999999
Q ss_pred cCCCCCCCCC---CCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~---~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
||........ .+...+.+++|+.+...+++++ +...+++|++||..++++
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~ 135 (227)
T PRK08219 79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRA 135 (227)
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCc
Confidence 9986422111 1122445688999966655543 445679999999887654
No 213
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.70 E-value=1.3e-16 Score=130.07 Aligned_cols=127 Identities=20% Similarity=0.211 Sum_probs=94.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhccc--CCCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.|+++||||+|+||++++++|+++|++|++++|+.. ..++..... .+.++.++.+|++|++++++++ ++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999853 222222211 1345888999999999887643 3579
Q ss_pred cEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
|++|||||..... ...++.....+++|+.++.++++++ + .+.++||++||..++.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~ 145 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG 145 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC
Confidence 9999999986421 1223344566789999999987754 2 35679999999887654
No 214
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.70 E-value=1e-16 Score=130.80 Aligned_cols=129 Identities=17% Similarity=0.178 Sum_probs=95.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCCh--hccchhh-----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNP--KDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~--~~v~~~~----- 148 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.++..+++. ...+..+.+|++|. +++++..
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999987766544331 23466788999763 3444321
Q ss_pred -h-CCCcEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 149 -F-EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~-~~~d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+ +++|+||||||.... + ...+++..+.+++|+.|+.++++++. .+.+++|++||..+..
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 152 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET 152 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc
Confidence 3 579999999997531 1 12223344567999999999988772 2457999999976654
No 215
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.3e-17 Score=133.39 Aligned_cols=124 Identities=19% Similarity=0.147 Sum_probs=92.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------h---CC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------F---EG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~---~~ 151 (214)
+|+++||||+||||++++++|+++|++|++++|+.+... ... .+.++.++++|++|.+++++.+ + ++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence 358999999999999999999999999999999865321 111 1346888999999999887632 1 26
Q ss_pred CcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|++|||||...... ...+...+.+++|+.|+..+++.+. .+.++||++||.+++.+
T Consensus 78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 143 (243)
T PRK07023 78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA 143 (243)
T ss_pred ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC
Confidence 899999999764211 1223345667899999888777652 24579999999887654
No 216
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.70 E-value=8.2e-17 Score=143.24 Aligned_cols=121 Identities=17% Similarity=0.126 Sum_probs=91.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH-HHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++|+|+||||+|+||++++++|+++|++|++++|..... +.........+++++.+|+.++. +.++|+|||+|
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~------l~~~D~ViHlA 191 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI------LLEVDQIYHLA 191 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh------hcCCCEEEEee
Confidence 568999999999999999999999999999998753221 11112222456788889987642 34699999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+.... .....++.+.+++|+.|+.+++++|+....++|++||..+|+.
T Consensus 192 a~~~~-~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~ 239 (442)
T PLN02206 192 CPASP-VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 239 (442)
T ss_pred eecch-hhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCC
Confidence 97642 2222345667899999999999999653358999999999864
No 217
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.70 E-value=5.9e-17 Score=132.34 Aligned_cols=127 Identities=17% Similarity=0.081 Sum_probs=93.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+|+++||||+|+||++++++|+++|++|+++ .|++++.++...++. +.++..+.+|++|++++++++ ++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999999999874 677666555443322 345778999999999888643 3578
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----c---CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----S---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~---~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ..+++....+++|+.++.++++++. . ..++||++||.+++.+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~ 148 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG 148 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC
Confidence 99999999753211 1222334667999999988887651 1 2357999999877543
No 218
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.70 E-value=1.2e-16 Score=148.91 Aligned_cols=128 Identities=18% Similarity=0.234 Sum_probs=97.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh-hCCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~~~~d~l 155 (214)
++|+||||||+|+||++++++|+++ |++|++++|.. +....+.......+++++.+|++|.+.+...+ ..++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 4689999999999999999999998 68899998753 22222221112346889999999988877532 2579999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEccccccccC
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS~~~~~~~ 209 (214)
||+|+..... ..+.+....+++|+.|+.+++++++. + .+++|++||..+|+..
T Consensus 85 iHlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~ 139 (668)
T PLN02260 85 MHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGET 139 (668)
T ss_pred EECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCC
Confidence 9999986532 22334456779999999999999954 4 7899999999988753
No 219
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.70 E-value=1.2e-16 Score=130.06 Aligned_cols=125 Identities=20% Similarity=0.297 Sum_probs=92.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
|+++||||+|+||++++++|+++|++|+++.| +++..++...... +.++.++.+|++|++++++++ ++++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 68999999999999999999999999999988 5555444332221 346888999999999887633 35799
Q ss_pred EEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
+||||||..... ....++....+++|+.++..+++++ + .+.++||++||..+..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~ 142 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK 142 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC
Confidence 999999976421 1222233556688999998877765 2 3567999999976543
No 220
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.70 E-value=1.1e-16 Score=132.19 Aligned_cols=125 Identities=15% Similarity=0.164 Sum_probs=90.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----hHHHHHhcccC--CCCEEEEEecCCChhccchhh----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
.+++|+++||||+||||+++++.|+++|++|++++++. +..++..+++. +.++.++++|++|++++++.+
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 45679999999999999999999999999977776532 23333322221 346788999999999988643
Q ss_pred --hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEE-ccc
Q 028043 149 --FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLV-SSV 203 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~v-SS~ 203 (214)
++++|++|||||...... ...++..+.+++|+.|+..+++++.+ ..++++++ ||.
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~ 148 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSL 148 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecch
Confidence 357999999999854211 22233456778999999999998743 23567766 443
No 221
>PRK09135 pteridine reductase; Provisional
Probab=99.70 E-value=2e-16 Score=129.17 Aligned_cols=127 Identities=13% Similarity=0.161 Sum_probs=93.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC---CCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.++++++||||+|+||++++++|+++|++|++++|+. +..+++.+.+. ...+.++.+|++|.+++.+++ +
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4568999999999999999999999999999999863 33444332221 235788999999999887643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||...... ..+++....+++|+.|+.++++++. ...+.++++++....
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE 147 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc
Confidence 47999999999764221 1223345677899999999999873 234578887775543
No 222
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.70 E-value=1.7e-16 Score=130.18 Aligned_cols=130 Identities=14% Similarity=0.106 Sum_probs=94.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+.+++++||||+|+||++++++|+++|++|++..|+ .+...+....+. +.++..+.+|++|++++.+.+ +
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 3567999999999999999999999999999887754 333333222111 235678899999999887632 3
Q ss_pred CCCcEEEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||....... ..+.....+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP 147 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC
Confidence 579999999998543221 1112245678999999999987732 3468999999988654
No 223
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.69 E-value=2.1e-16 Score=147.22 Aligned_cols=131 Identities=16% Similarity=0.177 Sum_probs=99.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+.+|+++||||+||||++++++|+++|++|++++|+.+.+++..+.+. ...+..+++|++|++++++++
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 44678999999999999999999999999999999999887765543322 235678999999999988643
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----cc-C-CCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS-S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~-~-~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.|++.+++++ +. + .++||++||..+..+
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~ 559 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA 559 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC
Confidence 458999999999764221 112233556789999998887654 22 2 368999999876543
No 224
>PRK07069 short chain dehydrogenase; Validated
Probab=99.69 E-value=1.6e-16 Score=130.16 Aligned_cols=124 Identities=17% Similarity=0.208 Sum_probs=90.6
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
++||||+||||+++++.|+++|++|++++|+ .+.++++.+.+. ...+..+++|++|++++++++ ++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 8999999999999999999999999999998 555555443332 123456889999999887633 46799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHH----HHHhc-cCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNL----VSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l----~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...++....+++|+.++..+ +++++ .+.++||++||.+++.+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~ 144 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA 144 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC
Confidence 9999999865321 12223355678898865544 44443 35679999999987654
No 225
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.69 E-value=1.5e-16 Score=141.40 Aligned_cols=121 Identities=17% Similarity=0.120 Sum_probs=90.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+.|+|+||||+|+||++|+++|+++|++|++++|.... .+.........+++++.+|+.+.. +.++|+|||+|
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~------~~~~D~ViHlA 192 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI------LLEVDQIYHLA 192 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc------ccCCCEEEECc
Confidence 35789999999999999999999999999999985321 111111112345778888887642 34699999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+...... ...++...+++|+.|+.+++++|+....++|++||.++|+.
T Consensus 193 a~~~~~~-~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~ 240 (436)
T PLN02166 193 CPASPVH-YKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGD 240 (436)
T ss_pred eeccchh-hccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCC
Confidence 9764222 22345567889999999999999653358999999999874
No 226
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.69 E-value=8.7e-17 Score=135.68 Aligned_cols=119 Identities=27% Similarity=0.319 Sum_probs=94.7
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCC-cEEEeccCCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV-THVICCTGTT 162 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~-d~li~~Ag~~ 162 (214)
.||||||+|+||++++++|+++|++|++++|......... .++.++.+|++|.+.+.+ ..... |+|||+|+..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~d~~~~~~~~~-~~~~~~d~vih~aa~~ 75 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----SGVEFVVLDLTDRDLVDE-LAKGVPDAVIHLAAQS 75 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----cccceeeecccchHHHHH-HHhcCCCEEEEccccC
Confidence 4999999999999999999999999999999876544321 356789999999876665 34555 9999999988
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
..+.....++...+.+|+.|+.++++++++ +++++|+.||.++++.
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~ 122 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYG 122 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECC
Confidence 643322112344789999999999999965 8999999888776664
No 227
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.68 E-value=3.7e-16 Score=126.39 Aligned_cols=121 Identities=17% Similarity=0.154 Sum_probs=94.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--h--CCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~--~~~d~li~ 157 (214)
+|+++||||+|+||++++++|+++|++|++++|+++..+++.. .+++++.+|++|.++++++. + +++|++||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----LGAEALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 4789999999999999999999999999999999887766542 24668999999999888632 2 25999999
Q ss_pred ccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhcc----CCCeEEEEcccccc
Q 028043 158 CTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVT 206 (214)
Q Consensus 158 ~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~~----~~~~iV~vSS~~~~ 206 (214)
|||...... ..+++.+..+++|+.++.++++++.+ ..+++|++||..+.
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~ 134 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGS 134 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccc
Confidence 999863211 12334466789999999999987732 34679999997653
No 228
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.68 E-value=2.3e-16 Score=129.49 Aligned_cols=128 Identities=22% Similarity=0.270 Sum_probs=95.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhccc-C-C-CCEEEEEecCCC-hhccchhh----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQ-D-E-ETLQVCKGDTRN-PKDLDPAI---- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~-~-~-~~~~~v~~Di~d-~~~v~~~~---- 148 (214)
++.+|+++||||++|||++++++|+++|++|+++.|+.+. .+.+.+.. . . ..+.+..+|+++ .++++..+
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999888887543 22222111 1 1 356778899998 88777533
Q ss_pred --hCCCcEEEeccCCCCC--CC--CCCCCCCchhHHHHHHHHHHHHHhccCCC--eEEEEcccccc
Q 028043 149 --FEGVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSALPSSLK--RIVLVSSVGVT 206 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~--~~--~~~~~~~~~~~vNv~g~~~l~~a~~~~~~--~iV~vSS~~~~ 206 (214)
++++|++|||||.... +. ...+..+..+++|+.|+..+++++.+... +||++||..+.
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~ 147 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL 147 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc
Confidence 5679999999998642 11 22245567789999999999885533333 99999999876
No 229
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.68 E-value=2.4e-16 Score=128.45 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=93.5
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
++||||+||||++++++|+++|++|++++|+ .+..+++.+++. +.++.++.+|++|.+++++++ ++++|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999998875 344444433322 346888999999999887633 4578999
Q ss_pred EeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----c-cCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~-~~~~~iV~vSS~~~~~~ 208 (214)
|||||..... ...++++...+++|+.|+.++++++ + ...++||++||.++..+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 142 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG 142 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC
Confidence 9999976422 1233445667899999999998865 1 34578999999876543
No 230
>PRK08017 oxidoreductase; Provisional
Probab=99.68 E-value=4.9e-16 Score=127.77 Aligned_cols=122 Identities=19% Similarity=0.185 Sum_probs=93.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~~~~d~ 154 (214)
+|+++||||+|+||+++++.|+++|++|++++|++++.+.+.+ .+++.+++|++|.+++++++ .+++|.
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ 77 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLYG 77 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence 3689999999999999999999999999999999987766542 24678899999998876532 146899
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHH----hc-cCCCeEEEEccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSA----LP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a----~~-~~~~~iV~vSS~~~~~ 207 (214)
+|||||...... ..++...+.+++|+.|+.++++. ++ .+.++||++||.++..
T Consensus 78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 138 (256)
T PRK08017 78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI 138 (256)
T ss_pred EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc
Confidence 999999754211 12233456779999999887553 33 3567999999986543
No 231
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.68 E-value=3.5e-16 Score=127.00 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=91.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-----CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-----~~~d~l 155 (214)
.+|+++||||+|+||++++++|+++|++|++++|+.+.. ...+++.+|++|.+++++.+- .++|+|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------FPGELFACDLADIEQTAATLAQINEIHPVDAI 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence 468999999999999999999999999999999987541 112578899999998876431 268999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
|||||...... ...++....+++|+.++.++++++ +.+.++||++||.+.++
T Consensus 73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 132 (234)
T PRK07577 73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFG 132 (234)
T ss_pred EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccC
Confidence 99999865321 122334556789999998888765 23567999999987654
No 232
>PRK08324 short chain dehydrogenase; Validated
Probab=99.67 E-value=5.4e-16 Score=144.83 Aligned_cols=131 Identities=19% Similarity=0.194 Sum_probs=102.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
..+.+|+++||||+||||++++++|+++|++|++++|+.+.++...+.+.. .++.++.+|++|++++++++ ++
T Consensus 418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 345789999999999999999999999999999999999887665544322 36788999999999887633 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCC-CeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~-~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+.....+++|+.|+.++++++ + .+. ++||++||..+..+
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~ 564 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP 564 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC
Confidence 8999999999765321 122334566789999999998866 2 233 79999999877643
No 233
>PRK06720 hypothetical protein; Provisional
Probab=99.67 E-value=8.8e-16 Score=119.89 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=90.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||++|||+++++.|++.|++|++++|+.+..++..+++. +....++.+|++|.+++++.+ +
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999998876655433332 345677899999998887632 5
Q ss_pred CCCcEEEeccCCCCCCCCCCC-CCCchhHHHHHHHHHHHHHh-----c-------cCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPSRRWD-GDNTPEKVDWEGVRNLVSAL-----P-------SSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~~~-~~~~~~~vNv~g~~~l~~a~-----~-------~~~~~iV~vSS~~~~ 206 (214)
+++|++|||||........++ .......+|+.++...++.+ + ...+|+..|||.++.
T Consensus 92 G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 92 SRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred CCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 689999999998663322222 11111244555554444432 1 134689999998764
No 234
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=5e-16 Score=126.42 Aligned_cols=126 Identities=18% Similarity=0.145 Sum_probs=96.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++|+++||||+|+||+++++.|+++|++|++++|++++.+++.+... ..+++++++|++|++++++.+ ++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999999999999999999887766533322 235788999999999887532 4568
Q ss_pred cEEEeccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccc
Q 028043 153 THVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGV 205 (214)
Q Consensus 153 d~li~~Ag~~~~~~-~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~ 205 (214)
|.+||++|...... ...+.....+++|+.++..+++.+.+ ..+++|++||..+
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 139 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG 139 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence 99999998653211 11223345578899999888887632 2368999999865
No 235
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.67 E-value=7.3e-16 Score=128.09 Aligned_cols=125 Identities=14% Similarity=0.107 Sum_probs=89.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC---CCCEEEEEecCCChhccchh----------h
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD---EETLQVCKGDTRNPKDLDPA----------I 148 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~----------~ 148 (214)
++++||||+||||++++++|+++|++|++++|+ ++.++++.+++. +..+.++.+|++|++++.+. .
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 579999999999999999999999999998754 555555444332 23566789999999866321 1
Q ss_pred hCCCcEEEeccCCCCCCC---CCCC-----------CCCchhHHHHHHHHHHHHHhcc-----------CCCeEEEEccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWD-----------GDNTPEKVDWEGVRNLVSALPS-----------SLKRIVLVSSV 203 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~-----------~~~~~~~vNv~g~~~l~~a~~~-----------~~~~iV~vSS~ 203 (214)
++++|+||||||...... ..++ ...+.+++|+.+++.+++++.+ ..++||++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 468999999999754211 1111 1235679999999999887521 12469999988
Q ss_pred cccc
Q 028043 204 GVTK 207 (214)
Q Consensus 204 ~~~~ 207 (214)
.+..
T Consensus 162 ~~~~ 165 (267)
T TIGR02685 162 MTDQ 165 (267)
T ss_pred hccC
Confidence 7654
No 236
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.67 E-value=3.5e-16 Score=131.98 Aligned_cols=123 Identities=20% Similarity=0.211 Sum_probs=91.3
Q ss_pred EEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhhhCC--CcEEEe
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVIC 157 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~--~d~li~ 157 (214)
+|+||||+|+||++++++|++.| ++|++++|.. .+.+.+.......+++++.+|++|++++.++ +.+ +|+|||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRL-FTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHH-HhhcCCCEEEE
Confidence 48999999999999999999987 7898887642 1112111111134678899999999999874 554 999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS~~~~~~ 208 (214)
+||.... ....+.....+++|+.|+.++++++++ +. .++|++||.++|+.
T Consensus 80 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~ 131 (317)
T TIGR01181 80 FAAESHV-DRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGD 131 (317)
T ss_pred cccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCC
Confidence 9997642 122234456789999999999998854 33 38999999988764
No 237
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.66 E-value=4.4e-16 Score=126.17 Aligned_cols=122 Identities=19% Similarity=0.194 Sum_probs=92.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--h--CCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~--~~~d~li~ 157 (214)
+|+++||||+||||++++++|+++|++|++++|++++.+++.+. .++.+..+|++|++++++.. + +++|+|||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~ 77 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQAL---PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFV 77 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhc---cccceEEcCCCCHHHHHHHHHHhhcCCCCEEEE
Confidence 37899999999999999999999999999999998766554321 34677889999998887633 1 36999999
Q ss_pred ccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccc
Q 028043 158 CTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 158 ~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~ 206 (214)
|||...... ...++....+++|+.++.++++++. .+.+.++++||..+.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~ 135 (225)
T PRK08177 78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGS 135 (225)
T ss_pred cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccc
Confidence 999864211 1223345567889999999998773 233689999987554
No 238
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.66 E-value=8.7e-17 Score=123.52 Aligned_cols=129 Identities=17% Similarity=0.136 Sum_probs=104.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
.+.|+.|++||+.-|||++++++|++.|++|+++.|+++.+..+.++.. ..++.+.+|+++.+.+.+.+ ...+|.++
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p-~~I~Pi~~Dls~wea~~~~l~~v~pidgLV 82 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP-SLIIPIVGDLSAWEALFKLLVPVFPIDGLV 82 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC-cceeeeEecccHHHHHHHhhcccCchhhhh
Confidence 4679999999999999999999999999999999999999998876653 34788999999998888754 23799999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh------ccCCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~------~~~~~~iV~vSS~~~~~~ 208 (214)
||||+....+ ...+..+..+++|+.+..++.+.. +...+.||++||.+...+
T Consensus 83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~ 143 (245)
T KOG1207|consen 83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP 143 (245)
T ss_pred ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc
Confidence 9999865322 223455677899999988887763 223467999999988654
No 239
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.66 E-value=3.7e-16 Score=129.09 Aligned_cols=125 Identities=17% Similarity=0.096 Sum_probs=93.8
Q ss_pred EEEEEcCchHHHHHHHHHHHH----CCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------h
Q 028043 84 LVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++||||++|||++++++|++ .|++|++++|+++.++++.+++. +..+.++.+|++|++++++++ +
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 79999999999988777655442 235788999999999887633 1
Q ss_pred CC----CcEEEeccCCCCCC-C--C---CCCCCCchhHHHHHHHHHHHHHh----cc--C-CCeEEEEcccccccc
Q 028043 150 EG----VTHVICCTGTTAFP-S--R---RWDGDNTPEKVDWEGVRNLVSAL----PS--S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~----~d~li~~Ag~~~~~-~--~---~~~~~~~~~~vNv~g~~~l~~a~----~~--~-~~~iV~vSS~~~~~~ 208 (214)
+. .|+||||||..... . . +.++..+.+++|+.|+..+++++ +. + .++||++||.++..+
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~ 157 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP 157 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC
Confidence 21 36999999975321 1 1 12334567899999998888765 22 1 358999999887543
No 240
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.66 E-value=5e-16 Score=128.32 Aligned_cols=124 Identities=20% Similarity=0.209 Sum_probs=98.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcC--hhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI 156 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~--~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li 156 (214)
|++|||||+||||++.++.++++.. +|+.++.- ..+.+.+......++..++++||.|.+.+.+. +. ++|+|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~-~~~~~~D~Vv 79 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRL-FKEYQPDAVV 79 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHH-HHhcCCCeEE
Confidence 5799999999999999999998765 46666652 12333333333357899999999999999984 44 699999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCC--CeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSL--KRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~--~~iV~vSS~~~~~~ 208 (214)
|.|+-+++ +.....+..+.++|+.||+++++++++.- -|+++||+.-+||.
T Consensus 80 hfAAESHV-DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~ 132 (340)
T COG1088 80 HFAAESHV-DRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGD 132 (340)
T ss_pred Eechhccc-cccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccccccc
Confidence 99999984 34456777888999999999999996643 38999999999984
No 241
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.64 E-value=1.1e-15 Score=125.49 Aligned_cols=126 Identities=20% Similarity=0.235 Sum_probs=91.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccCCCCEEEEEecCCChhccchhh------hC--CC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE--GV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~--~~ 152 (214)
+|+++||||+||||++++++|+++|++|++++|++ +.++++.+.. +.+++++++|++|++++++.+ ++ +.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQEDNV 79 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence 37899999999999999999999999999999987 4444443322 346888999999999887632 11 12
Q ss_pred --cEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh----cc--CCCeEEEEcccccccc
Q 028043 153 --THVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PS--SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 --d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~----~~--~~~~iV~vSS~~~~~~ 208 (214)
+++|||||..... ...++.....+++|+.++..+++++ +. ..++||++||..+..+
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP 147 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC
Confidence 2899999975421 1222334556788999988877755 22 2468999999876543
No 242
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.64 E-value=1.7e-15 Score=135.00 Aligned_cols=126 Identities=19% Similarity=0.129 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+.+|+++||||+||||+++++.|+++|++|++++|.. +.++++.+++ +..++.+|++|++++++.+ ++
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---GGTALALDITAPDAPARIAEHLAERHG 283 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence 45689999999999999999999999999999998843 3444443332 2457889999999887633 34
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----CCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----~~~~iV~vSS~~~~~ 207 (214)
++|+||||||+..... ...+.....+++|+.|+.++.+++.+ ..++||++||.++..
T Consensus 284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~ 348 (450)
T PRK08261 284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA 348 (450)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence 7999999999865221 22234456778999999999998733 237899999987653
No 243
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.64 E-value=4.7e-15 Score=116.27 Aligned_cols=104 Identities=31% Similarity=0.515 Sum_probs=90.9
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF 164 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~~~ 164 (214)
|+|+||||++|+.++++|+++|++|+++.|++++.++ ..+++++++|+.|++++.++ +.++|+||+++|....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~~a-l~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVKAA-LKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHHHH-HTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhhhh-hhhcchhhhhhhhhcc
Confidence 7999999999999999999999999999999998776 46799999999999999974 7899999999985431
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 165 PSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 165 ~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
+...+.+++++++ .+.+++|++||.+.+...
T Consensus 74 --------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~ 105 (183)
T PF13460_consen 74 --------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDP 105 (183)
T ss_dssp --------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTC
T ss_pred --------------cccccccccccccccccccceeeeccccCCCC
Confidence 2677889999884 588999999999987743
No 244
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.63 E-value=1.7e-15 Score=122.96 Aligned_cols=123 Identities=20% Similarity=0.211 Sum_probs=91.5
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
++|||++|+||++++++|+++|++|++++|+. +..++..+.+. +..+.++.+|++|++++++.+ ++++|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999875 33333322222 335788999999999887643 3578999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
||+||...... ...+.....+++|+.++.++++++. .+.+++|++||.+++.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 140 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM 140 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC
Confidence 99999864211 1112345567899999999998773 3457999999986543
No 245
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.63 E-value=1.6e-15 Score=120.67 Aligned_cols=109 Identities=23% Similarity=0.220 Sum_probs=86.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~Ag 160 (214)
|+++||||+||||++++++|+++ ++|++++|++. .+++|++|++++++.+ ++++|+||||||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------DVQVDITDPASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------ceEecCCChHHHHHHHHhcCCCCEEEECCC
Confidence 47999999999999999999999 99999998753 3679999999988743 358999999999
Q ss_pred CCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 161 TTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 161 ~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
...... ..+++..+.+++|+.|+.++++++.+ ..++|+++||..+..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~ 117 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE 117 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC
Confidence 754321 12234456678999999999997732 346899999987754
No 246
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.63 E-value=2.8e-15 Score=126.93 Aligned_cols=124 Identities=21% Similarity=0.248 Sum_probs=92.5
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhh-CCCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag~ 161 (214)
+|+||||+|+||++++++|+++|++|++++|......+...... ..+++.+.+|++|.+++++++- .++|+|||+||.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 48999999999999999999999999988764322111111111 1257788999999999887432 379999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.... ....+....++.|+.++.+++++++ .+.+++|++||.+.|+.
T Consensus 81 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 81 IAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGE 127 (328)
T ss_pred cCcc-hhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCC
Confidence 6432 2223445567899999999999884 46789999999888764
No 247
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.63 E-value=1.5e-15 Score=126.45 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=99.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh---hC--C
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI---FE--G 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~---~~--~ 151 (214)
..|+-++|||||.|||++.+++|+++|.+|++++|++++++.+++++. ...+.++..|.++.+.+-+.+ +. .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 346899999999999999999999999999999999999999877765 345778999999877522222 23 4
Q ss_pred CcEEEeccCCCCC-CC----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccccC
Q 028043 152 VTHVICCTGTTAF-PS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 152 ~d~li~~Ag~~~~-~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~~ 209 (214)
+-+||||+|.... |. ...........+|+.++..+++... .+.+-||++||.++..+.
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~ 194 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPT 194 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccC
Confidence 6689999999862 21 1111335566889999888888663 345689999999886543
No 248
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.63 E-value=5.3e-16 Score=125.73 Aligned_cols=120 Identities=21% Similarity=0.325 Sum_probs=95.3
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGTT 162 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag~~ 162 (214)
|+||||+|+||++++++|+++|+.|+.+.|+......... ..+++++.+|+.|.+.+++. +. ++|+|||+||..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~---~~~~~~~~~dl~~~~~~~~~-~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK---KLNVEFVIGDLTDKEQLEKL-LEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH---HTTEEEEESETTSHHHHHHH-HHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc---cceEEEEEeecccccccccc-ccccCceEEEEeeccc
Confidence 7999999999999999999999999988887654332211 12688999999999999874 43 579999999976
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
.. ...+......++.|+.++.+++++++ .+.+++|++||..+|+..
T Consensus 77 ~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 77 SN-PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDP 123 (236)
T ss_dssp SH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSS
T ss_pred cc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 31 11123455677899999999999995 567899999999998865
No 249
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.62 E-value=1.6e-15 Score=130.25 Aligned_cols=126 Identities=25% Similarity=0.374 Sum_probs=98.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++.+++||||+|++|++++++|++++ .+|.++|..+.. ............++++.+|+.|...+.++ +.++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a-~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNA-FQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhh-ccCc-eEE
Confidence 46799999999999999999999998 789999987642 11111111256788999999999999975 7788 777
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|+|+... +.....+.+..+++|+.||.+++++|+ .+++++||+||..+..++
T Consensus 81 h~aa~~~-~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g 133 (361)
T KOG1430|consen 81 HCAASPV-PDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGG 133 (361)
T ss_pred EeccccC-ccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCC
Confidence 7777654 222223456678999999999999995 599999999999987654
No 250
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.62 E-value=4.2e-15 Score=137.98 Aligned_cols=120 Identities=22% Similarity=0.325 Sum_probs=91.6
Q ss_pred CEEEEEcCchHHHHHHHHHHH--HCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChh------ccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLL--SRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPK------DLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~--~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~------~v~~~~~~~~ 152 (214)
|+|+||||+|+||++++++|+ +.|++|++++|+... .+.+.......+++++.+|++|++ .+++ +.++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~--l~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE--LGDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH--hcCC
Confidence 479999999999999999999 589999999996532 222222222256889999999853 3332 2789
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
|+|||+||..... .......++|+.|+.+++++++. +.+++|++||.++++.
T Consensus 79 D~Vih~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~ 131 (657)
T PRK07201 79 DHVVHLAAIYDLT----ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGD 131 (657)
T ss_pred CEEEECceeecCC----CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccC
Confidence 9999999975421 12344668999999999999854 6889999999998864
No 251
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.62 E-value=2.5e-15 Score=127.14 Aligned_cols=117 Identities=13% Similarity=0.073 Sum_probs=86.2
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh---CCCcEEEeccC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICCTG 160 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~---~~~d~li~~Ag 160 (214)
|+||||+|+||++++++|+++|+ +|++++|..... .+.+ . ....+..|+.+.+.++.... .++|+|||+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~-~---~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLN-L---ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhh-h---hheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence 68999999999999999999998 688887654321 1110 1 11346688888877765322 58999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
..... ..+....+++|+.|+.++++++++...++|++||.++|+..
T Consensus 76 ~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 76 CSDTT---ETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDG 121 (314)
T ss_pred ccCcc---ccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCC
Confidence 75421 23445677999999999999985533489999999988743
No 252
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.61 E-value=3.5e-15 Score=114.77 Aligned_cols=124 Identities=23% Similarity=0.176 Sum_probs=91.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHh---ccc--CCCCEEEEEecCCChhccchhh------hC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLF---GKQ--DEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~---~~~--~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
|+++||||+|+||++++++|+++|+ .|++++|+++..+... +.+ .+.++.++.+|+++++++++.+ ++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999997 5888888754322111 111 1346778899999998877632 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVT 206 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~ 206 (214)
++|.|||+||...... ...++....+++|+.++.+++++++. +.+++|++||..+.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~ 140 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGV 140 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHh
Confidence 6899999999764221 12233456678999999999998854 56899999998664
No 253
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.60 E-value=4.3e-15 Score=120.86 Aligned_cols=117 Identities=18% Similarity=0.220 Sum_probs=84.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~ 158 (214)
|+++||||+||||++++++|+++| +.|++..|+.... ....++.++++|++|.+++++.. ++++|+||||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 589999999999999999999985 5666666654321 12356788999999999877632 5689999999
Q ss_pred cCCCCCC----CC-----CCCCCCchhHHHHHHHHHHHHHhcc-----CCCeEEEEccccc
Q 028043 159 TGTTAFP----SR-----RWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVGV 205 (214)
Q Consensus 159 Ag~~~~~----~~-----~~~~~~~~~~vNv~g~~~l~~a~~~-----~~~~iV~vSS~~~ 205 (214)
||..... .. +.+.....+++|+.++..+++++.+ +.++++++||..+
T Consensus 75 aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~ 135 (235)
T PRK09009 75 VGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG 135 (235)
T ss_pred CccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc
Confidence 9987421 11 1112235678999999998887622 3468999987543
No 254
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.60 E-value=3.9e-15 Score=124.62 Aligned_cols=104 Identities=19% Similarity=0.172 Sum_probs=84.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag~ 161 (214)
+|+||||+|+||++++++|+++|++|++++|+ .+|+.|.++++++ +. ++|+|||+||.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------~~d~~~~~~~~~~-~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------QLDLTDPEALERL-LRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------ccCCCCHHHHHHH-HHhCCCCEEEECCcc
Confidence 48999999999999999999999999999885 3789999998875 44 46999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
..... ........+++|+.++.+++++++....++|++||.++|+.
T Consensus 61 ~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 106 (287)
T TIGR01214 61 TDVDG-AESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDG 106 (287)
T ss_pred ccccc-cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecC
Confidence 64221 12234456789999999999998653358999999988764
No 255
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.58 E-value=3.6e-15 Score=125.66 Aligned_cols=104 Identities=18% Similarity=0.156 Sum_probs=83.0
Q ss_pred EEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccCCCC
Q 028043 86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGTTA 163 (214)
Q Consensus 86 lITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag~~~ 163 (214)
|||||+|+||++++++|++.|++|+++.+. ..+|++|.+++++. +. ++|+|||+|+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------~~~Dl~~~~~l~~~-~~~~~~d~Vih~A~~~~ 61 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------KELDLTRQADVEAF-FAKEKPTYVILAAAKVG 61 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------ccCCCCCHHHHHHH-HhccCCCEEEEeeeeec
Confidence 699999999999999999999998766432 14899999988874 33 5899999999754
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 164 FPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 164 ~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.......++...+++|+.++.+++++++ .+.+++|++||..+|+.
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~ 107 (306)
T PLN02725 62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPK 107 (306)
T ss_pred ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCC
Confidence 2222223455678899999999999995 46789999999998874
No 256
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.58 E-value=1.3e-14 Score=124.51 Aligned_cols=120 Identities=20% Similarity=0.309 Sum_probs=88.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHH------HHHhcccC------C-CCEEEEEecCCChh------
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKA------TTLFGKQD------E-ETLQVCKGDTRNPK------ 142 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~------~~~~~~~~------~-~~~~~v~~Di~d~~------ 142 (214)
+|+||||||+||++++++|+++| ++|+++.|+.+.. ++..+... . .+++++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 6799999976522 11111110 1 46889999998653
Q ss_pred ccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 143 ~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.... +.+++|+||||||..... .......++|+.|+.++++++. .+.+++|++||.++++.
T Consensus 81 ~~~~-~~~~~d~vih~a~~~~~~----~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~ 142 (367)
T TIGR01746 81 EWER-LAENVDTIVHNGALVNWV----YPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAA 142 (367)
T ss_pred HHHH-HHhhCCEEEeCCcEeccC----CcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCC
Confidence 2332 356899999999976421 2234456799999999999885 45677999999998865
No 257
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.58 E-value=6e-15 Score=124.94 Aligned_cols=114 Identities=15% Similarity=0.236 Sum_probs=79.0
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccc---hhhh-----CCCcEEE
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD---PAIF-----EGVTHVI 156 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~---~~~~-----~~~d~li 156 (214)
|+||||+|+||++++++|+++|++++++.|+........ ....+|+.|..+.+ +.++ +++|+||
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi 73 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV--------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF 73 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH--------hhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence 899999999999999999999998777666543221110 11234555443322 2222 3699999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
|+||..... .+ +....+++|+.++.+++++++....++|++||.++|+..
T Consensus 74 h~A~~~~~~--~~-~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~ 123 (308)
T PRK11150 74 HEGACSSTT--EW-DGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGR 123 (308)
T ss_pred ECceecCCc--CC-ChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcC
Confidence 999965422 22 234467999999999999996533479999999998753
No 258
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.57 E-value=5e-15 Score=125.59 Aligned_cols=129 Identities=11% Similarity=0.103 Sum_probs=84.1
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc------------ccCCC-----CEEEEEecC
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG------------KQDEE-----TLQVCKGDT 138 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~------------~~~~~-----~~~~v~~Di 138 (214)
..+++|+++||||+ +|||+++|++|+++|++|++.++.+ .++.... ...+. .+..+.+|+
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 34678999999995 9999999999999999999987542 0110000 00000 011123344
Q ss_pred CChhc------------------cchhh------hCCCcEEEeccCCCCC---C--CCCCCCCCchhHHHHHHHHHHHHH
Q 028043 139 RNPKD------------------LDPAI------FEGVTHVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSA 189 (214)
Q Consensus 139 ~d~~~------------------v~~~~------~~~~d~li~~Ag~~~~---~--~~~~~~~~~~~~vNv~g~~~l~~a 189 (214)
++.++ +++.+ ++++|+||||||.... + ..+++++.+.+++|+.|+++++++
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a 162 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH 162 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 44432 23211 5789999999986431 1 133445577789999999999997
Q ss_pred hcc---CCCeEEEEccccccc
Q 028043 190 LPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 190 ~~~---~~~~iV~vSS~~~~~ 207 (214)
+.+ ..++||++||.++..
T Consensus 163 ~~p~m~~~G~ii~iss~~~~~ 183 (299)
T PRK06300 163 FGPIMNPGGSTISLTYLASMR 183 (299)
T ss_pred HHHHhhcCCeEEEEeehhhcC
Confidence 732 236899999987654
No 259
>PRK05865 hypothetical protein; Provisional
Probab=99.57 E-value=2e-14 Score=135.63 Aligned_cols=103 Identities=22% Similarity=0.340 Sum_probs=86.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|+.... . ..++.++.+|++|.+++.+ ++.++|+|||+|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~-----~~~v~~v~gDL~D~~~l~~-al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W-----PSSADFIAADIRDATAVES-AMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c-----ccCceEEEeeCCCHHHHHH-HHhCCCEEEECCCcc
Confidence 4799999999999999999999999999999975321 1 2357789999999999986 467899999999864
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV 203 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~ 203 (214)
.. .+++|+.|+.+++++++ .+.++||++||.
T Consensus 73 ~~----------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~ 104 (854)
T PRK05865 73 GR----------NDHINIDGTANVLKAMAETGTGRIVFTSSG 104 (854)
T ss_pred cc----------hHHHHHHHHHHHHHHHHHcCCCeEEEECCc
Confidence 21 36899999999999985 477899999996
No 260
>PLN02996 fatty acyl-CoA reductase
Probab=99.57 E-value=9.7e-15 Score=131.58 Aligned_cols=124 Identities=22% Similarity=0.296 Sum_probs=92.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChh------HHH-HHhc---------ccC-------CCCEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPE------KAT-TLFG---------KQD-------EETLQV 133 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~------~~~-~~~~---------~~~-------~~~~~~ 133 (214)
.++|+|+||||||+||++++++|++.+. +|+++.|... ++. ++.. ... ..++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 4679999999999999999999998653 5888888642 111 1110 000 156889
Q ss_pred EEecCCCh-------hccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccc
Q 028043 134 CKGDTRNP-------KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVG 204 (214)
Q Consensus 134 v~~Di~d~-------~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~ 204 (214)
+.+|++++ +.++. +..++|+|||+|+...+. .+.....++|+.|+.+++++++. +.+++|++||..
T Consensus 89 i~GDl~~~~LGLs~~~~~~~-l~~~vD~ViH~AA~v~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREE-MWKEIDIVVNLAATTNFD----ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred EecccCCcCCCCChHHHHHH-HHhCCCEEEECccccCCc----CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 99999843 33443 457899999999976531 34556789999999999998853 578999999999
Q ss_pred cccc
Q 028043 205 VTKF 208 (214)
Q Consensus 205 ~~~~ 208 (214)
+|+.
T Consensus 164 vyG~ 167 (491)
T PLN02996 164 VCGE 167 (491)
T ss_pred EecC
Confidence 9875
No 261
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.57 E-value=2.6e-14 Score=114.08 Aligned_cols=126 Identities=21% Similarity=0.256 Sum_probs=90.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHH-CCCeEEE-EEcChhHHHHHhcc--cCCCCEEEEEecCCChhccchhh--------h
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLS-RNIKSRL-LLRDPEKATTLFGK--QDEETLQVCKGDTRNPKDLDPAI--------F 149 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r~~~~~~~~~~~--~~~~~~~~v~~Di~d~~~v~~~~--------~ 149 (214)
.|.++||||++|||..++++|.+ .|.++++ .+|+++.+.+..+. ....++++++.|+++.+++..++ .
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 46799999999999999999997 4777655 56668874332222 23678999999999999888743 3
Q ss_pred CCCcEEEeccCCCCCCCCCC----CCCCchhHHHHHHHHHHHHHh----c-cC-----------CCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPSRRW----DGDNTPEKVDWEGVRNLVSAL----P-SS-----------LKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~~----~~~~~~~~vNv~g~~~l~~a~----~-~~-----------~~~iV~vSS~~~~~ 207 (214)
+++|+++||||+...-.... ....+.+++|..|+.++.+++ + .. ...||++||.++..
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 47999999999876211111 123556799999998888766 1 11 12699999987753
No 262
>PLN02778 3,5-epimerase/4-reductase
Probab=99.56 E-value=2e-14 Score=121.84 Aligned_cols=103 Identities=18% Similarity=0.161 Sum_probs=74.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag 160 (214)
.|+||||||+|+||++++++|+++|++|+... .|+.|.+.+...+- .++|+|||+||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~----------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa 66 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS----------------------GRLENRASLEADIDAVKPTHVFNAAG 66 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec----------------------CccCCHHHHHHHHHhcCCCEEEECCc
Confidence 47899999999999999999999999987532 22334444443221 26899999999
Q ss_pred CCCCCCCC--CCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccc
Q 028043 161 TTAFPSRR--WDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 161 ~~~~~~~~--~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~ 207 (214)
....+... ..++...+++|+.|+.+++++++. +.+ .+++||..+|+
T Consensus 67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~ 115 (298)
T PLN02778 67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFE 115 (298)
T ss_pred ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeC
Confidence 87633222 245566789999999999999954 555 55667666654
No 263
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.55 E-value=2.4e-14 Score=119.30 Aligned_cols=125 Identities=20% Similarity=0.245 Sum_probs=99.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+|+|||++.|||.+++.++..+|++|.++.|+..++.++++.++ ...+.+..+|+.|.+++...+ .+.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 689999999999999999999999999999999999988877665 123668889999998887643 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----cc--CCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~--~~~~iV~vSS~~~~~ 207 (214)
|.+|||||...... .+.+..+..+++|+.|+.+++++. +. +.++|+.+||..+..
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~ 177 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML 177 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc
Confidence 99999999876322 222334667799999999999865 21 345999999987753
No 264
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.55 E-value=1.5e-15 Score=127.97 Aligned_cols=111 Identities=19% Similarity=0.221 Sum_probs=81.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag~ 161 (214)
|+||||||+|.||+++.++|.++|++|+.+.|+ ..|++|.+.+++.+-. ++|+|||+||+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS-------------------DLDLTDPEAVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence 689999999999999999999999999999876 4789999988874322 69999999998
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC-CCCC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-ELPW 213 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~-~~p~ 213 (214)
..+.. ...++...+.+|+.++.+++++++....++|++||..++... ..||
T Consensus 62 ~~~~~-ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y 113 (286)
T PF04321_consen 62 TNVDA-CEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPY 113 (286)
T ss_dssp --HHH-HHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB
T ss_pred ecHHh-hhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCccccc
Confidence 75321 113456678999999999999997766799999999998644 3444
No 265
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.54 E-value=4.4e-14 Score=129.37 Aligned_cols=126 Identities=22% Similarity=0.284 Sum_probs=93.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChhH---HHHHhcc-------------cC-------CCCEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEK---ATTLFGK-------------QD-------EETLQV 133 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~~~-------------~~-------~~~~~~ 133 (214)
.++|+|+||||||+||++++++|++.+. +|+++.|.... .+.+.++ .. ..++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 4689999999999999999999998764 68899885321 1111100 00 236888
Q ss_pred EEecCCChh-----ccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccc
Q 028043 134 CKGDTRNPK-----DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVT 206 (214)
Q Consensus 134 v~~Di~d~~-----~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~ 206 (214)
+.+|+++++ +..+.+..++|+|||+|+...+. ++.....++|+.|+.+++++++. ..+++|++||..+|
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~----~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD----ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc----cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 999999873 22223456799999999986531 34556789999999999998843 46789999999998
Q ss_pred ccC
Q 028043 207 KFN 209 (214)
Q Consensus 207 ~~~ 209 (214)
+..
T Consensus 273 G~~ 275 (605)
T PLN02503 273 GQR 275 (605)
T ss_pred cCC
Confidence 764
No 266
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.54 E-value=5e-14 Score=116.31 Aligned_cols=115 Identities=24% Similarity=0.365 Sum_probs=73.7
Q ss_pred EEcCchHHHHHHHHHHHHCCC--eEEEEEcChhH---HHHHhccc------------CCCCEEEEEecCCChh------c
Q 028043 87 VAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEK---ATTLFGKQ------------DEETLQVCKGDTRNPK------D 143 (214)
Q Consensus 87 ITGasggIG~~la~~L~~~G~--~V~~~~r~~~~---~~~~~~~~------------~~~~~~~v~~Di~d~~------~ 143 (214)
||||||++|+++.++|++.+. +|+++.|..+. .+.+.+.+ ...+++++.+|++++. .
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999876 89999997532 22222111 1468999999999864 2
Q ss_pred cchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 144 v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
.+. +...+|+|||||+...+. ....+..++|+.|+.++++.+. ...++++|+||..+.
T Consensus 81 ~~~-L~~~v~~IiH~Aa~v~~~----~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~ 139 (249)
T PF07993_consen 81 YQE-LAEEVDVIIHCAASVNFN----APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVA 139 (249)
T ss_dssp HHH-HHHH--EEEE--SS-SBS-----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGT
T ss_pred hhc-cccccceeeecchhhhhc----ccchhhhhhHHHHHHHHHHHHHhccCcceEEecccccc
Confidence 222 245799999999977532 2445578999999999999886 455699999994443
No 267
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.54 E-value=3.5e-14 Score=145.94 Aligned_cols=127 Identities=20% Similarity=0.203 Sum_probs=96.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChh------------------------------------------
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE------------------------------------------ 117 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~------------------------------------------ 117 (214)
.++++|||||++|||.+++++|+++ |++|++++|++.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5799999999999999999999998 699999999820
Q ss_pred -----HHHHHhcccC--CCCEEEEEecCCChhccchhh-----hCCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHH
Q 028043 118 -----KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEG 182 (214)
Q Consensus 118 -----~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g 182 (214)
..++..+.+. +..+.++.+|++|.+++++++ .+++|+||||||+.... ..+.++....+++|+.|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0000011111 346788999999999988743 23699999999986522 23344556788999999
Q ss_pred HHHHHHHhcc-CCCeEEEEccccccc
Q 028043 183 VRNLVSALPS-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 183 ~~~l~~a~~~-~~~~iV~vSS~~~~~ 207 (214)
++++++++.. ..++||++||.+++.
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~ 2181 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFY 2181 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcC
Confidence 9999998854 567899999998754
No 268
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.53 E-value=3.2e-14 Score=118.33 Aligned_cols=109 Identities=22% Similarity=0.198 Sum_probs=91.3
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccCCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGTT 162 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag~~ 162 (214)
++||||++|.+|.+|++.|. .+++|+.++|.. +|++|++.+.+.+-. ++|+|||+|++.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt 61 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------LDITDPDAVLEVIRETRPDVVINAAAYT 61 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------ccccChHHHHHHHHhhCCCEEEECcccc
Confidence 49999999999999999998 779999988755 799999999875322 699999999998
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccCC-CCC
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-LPW 213 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~~-~p~ 213 (214)
.+...+ .+++..+.+|..|+.++++++..-..++|++||..++.... .||
T Consensus 62 ~vD~aE-~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y 112 (281)
T COG1091 62 AVDKAE-SEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPY 112 (281)
T ss_pred cccccc-CCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCC
Confidence 854433 44577889999999999999988778999999999976443 455
No 269
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.52 E-value=3.3e-14 Score=116.84 Aligned_cols=124 Identities=17% Similarity=0.180 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
....+++|+||||+|+||++||+.|..+|+.|+++|.--.. .+.+..-.....++.+.-|+..+ ++..+|.++
T Consensus 23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p------l~~evD~Iy 96 (350)
T KOG1429|consen 23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP------LLKEVDQIY 96 (350)
T ss_pred cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH------HHHHhhhhh
Confidence 34456899999999999999999999999999999875433 23333333356777777787654 456799999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
|.|+... |.....++.+.+..|+.|+.+++..+++-.+|+++.||..+|+.
T Consensus 97 hLAapas-p~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgd 147 (350)
T KOG1429|consen 97 HLAAPAS-PPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGD 147 (350)
T ss_pred hhccCCC-CcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCC
Confidence 9999887 44344566778899999999999988877799999999999985
No 270
>PRK12320 hypothetical protein; Provisional
Probab=99.51 E-value=1.3e-13 Score=127.81 Aligned_cols=104 Identities=21% Similarity=0.311 Sum_probs=83.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|++.... ..+++++.+|++|+. +.+ ++.++|+|||+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~-------~~~ve~v~~Dl~d~~-l~~-al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL-------DPRVDYVCASLRNPV-LQE-LAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc-------cCCceEEEccCCCHH-HHH-HhcCCCEEEEcCccC
Confidence 47999999999999999999999999999998764311 246788999999985 554 467899999999864
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG 204 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~ 204 (214)
.. . ...+|+.|+.++++++++...++|++||..
T Consensus 72 ~~------~---~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~ 104 (699)
T PRK12320 72 TS------A---PGGVGITGLAHVANAAARAGARLLFVSQAA 104 (699)
T ss_pred cc------c---hhhHHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 21 1 236899999999999955334899999874
No 271
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.50 E-value=7.5e-15 Score=112.84 Aligned_cols=128 Identities=18% Similarity=0.228 Sum_probs=102.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
.++-+.+|||+.+|+|++.+++|++.|+.|++++-..++.++..+++ +.++.+...|+++++++..++ |+++|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-g~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-GGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-CCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 46778999999999999999999999999999999888877777766 467889999999999988754 78999
Q ss_pred EEEeccCCCCC---------CCCCCCCCCchhHHHHHHHHHHHHHh-------cc---C-CCeEEEEcccccccc
Q 028043 154 HVICCTGTTAF---------PSRRWDGDNTPEKVDWEGVRNLVSAL-------PS---S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~---------~~~~~~~~~~~~~vNv~g~~~l~~a~-------~~---~-~~~iV~vSS~~~~~~ 208 (214)
+++||||+... ...+.++.+...++|+.||+|+++.. .+ + .+-||+..|.+++..
T Consensus 86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg 160 (260)
T KOG1199|consen 86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG 160 (260)
T ss_pred eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence 99999998641 11334556677799999999998732 11 1 235899999888753
No 272
>PLN00016 RNA-binding protein; Provisional
Probab=99.49 E-value=2e-13 Score=119.24 Aligned_cols=111 Identities=23% Similarity=0.277 Sum_probs=84.0
Q ss_pred CCCCEEEEE----cCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh-------cccCCCCEEEEEecCCChhccchhh
Q 028043 80 SSSKLVLVA----GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-------GKQDEETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 80 ~~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~v~~Di~d~~~v~~~~ 148 (214)
.++|+|+|| ||+|+||++++++|+++|++|++++|+.+....+. .++...+++++.+|+.|.+.+.+
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~-- 127 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVA-- 127 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhc--
Confidence 355889999 99999999999999999999999999875432211 11112358889999987433321
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
..++|+|||+++. +..++.+++++++ .+++++|++||.++|+..
T Consensus 128 ~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~ 172 (378)
T PLN00016 128 GAGFDVVYDNNGK-----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKS 172 (378)
T ss_pred cCCccEEEeCCCC-----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCC
Confidence 2479999999762 1346788999985 588999999999998753
No 273
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.46 E-value=1.4e-13 Score=108.61 Aligned_cols=123 Identities=25% Similarity=0.324 Sum_probs=81.8
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh---HHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~---~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++||||.|+||..+++.|+++|. +|+++.|+.. ..++..+++. +..+.++.+|++|++++++++ +++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999986 6999999831 1222222222 567889999999999988744 357
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
+|.|||+||...... .+.+.....+...+.|+.++.+++. .....+|..||+++.
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~ 140 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSL 140 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHh
Confidence 899999999865221 1222234445667899999999885 477899999999764
No 274
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.45 E-value=3.8e-14 Score=116.04 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=89.8
Q ss_pred cCc--hHHHHHHHHHHHHCCCeEEEEEcChhHH----HHHhcccCCCCEEEEEecCCChhccchhh------h-CCCcEE
Q 028043 89 GGS--GGVGQLVVASLLSRNIKSRLLLRDPEKA----TTLFGKQDEETLQVCKGDTRNPKDLDPAI------F-EGVTHV 155 (214)
Q Consensus 89 Gas--ggIG~~la~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~-~~~d~l 155 (214)
|++ +|||++++++|+++|++|++++|+.++. +++.++.. ..++++|++|++++++.+ + +++|+|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~---~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG---AEVIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT---SEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC---CceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 666 9999999999999999999999999874 33333332 346999999999988743 6 889999
Q ss_pred EeccCCCCCC---C----CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFP---S----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~---~----~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
|||+|..... . ..+++....+++|+.++..+++++.+ ..++||++||.++..+
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~ 140 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP 140 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc
Confidence 9999987630 1 11233456678899999999987732 3378999999977554
No 275
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.45 E-value=2.9e-13 Score=109.78 Aligned_cols=126 Identities=20% Similarity=0.184 Sum_probs=97.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-----eEEEEEcChhHHHHHhccc----C--CCCEEEEEecCCChhccchhh-
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-----KSRLLLRDPEKATTLFGKQ----D--EETLQVCKGDTRNPKDLDPAI- 148 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-----~V~~~~r~~~~~~~~~~~~----~--~~~~~~v~~Di~d~~~v~~~~- 148 (214)
+.|+++|||+++|||.++|.+|++... ++++.+|+.++.++++..+ + ...++++..|+++..++.++.
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 458999999999999999999998654 4777899998888765433 2 346788999999999888754
Q ss_pred -----hCCCcEEEeccCCCCCCC------------------------------CCCCCCCchhHHHHHHHHHHHHHhcc-
Q 028043 149 -----FEGVTHVICCTGTTAFPS------------------------------RRWDGDNTPEKVDWEGVRNLVSALPS- 192 (214)
Q Consensus 149 -----~~~~d~li~~Ag~~~~~~------------------------------~~~~~~~~~~~vNv~g~~~l~~a~~~- 192 (214)
|+++|.++.|||.+..+. ...+.....++.||.|++.+.+.+.+
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 668999999999976421 12244567789999999998886632
Q ss_pred ----CCCeEEEEcccccc
Q 028043 193 ----SLKRIVLVSSVGVT 206 (214)
Q Consensus 193 ----~~~~iV~vSS~~~~ 206 (214)
...++|++||..+-
T Consensus 162 l~~~~~~~lvwtSS~~a~ 179 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMAR 179 (341)
T ss_pred hhcCCCCeEEEEeecccc
Confidence 23489999998763
No 276
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.42 E-value=6.7e-13 Score=111.26 Aligned_cols=102 Identities=15% Similarity=0.183 Sum_probs=79.8
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-----hCC-CcEEEe
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEG-VTHVIC 157 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-----~~~-~d~li~ 157 (214)
+|+||||||+||++++++|+++|++|++++|++++.. ..+++.+.+|+.|++++..++ +.+ +|.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 4899999999999999999999999999999987542 235667889999999998753 156 999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEcccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~ 206 (214)
+++... + ......++++++ +.++++||++||....
T Consensus 74 ~~~~~~-------~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 74 VAPPIP-------D-------LAPPMIKFIDFARSKGVRRFVLLSASIIE 109 (285)
T ss_pred eCCCCC-------C-------hhHHHHHHHHHHHHcCCCEEEEeeccccC
Confidence 987431 1 012446788877 4689999999997653
No 277
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.41 E-value=6.8e-13 Score=110.89 Aligned_cols=113 Identities=22% Similarity=0.302 Sum_probs=77.2
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF 164 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~~~ 164 (214)
|+||||+|+||++++++|+++|++|++++|++...+... ... ..|+.. +.+.. .+.++|+|||+||....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~----~~~~~~-~~~~~-~~~~~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----WEG----YKPWAP-LAESE-ALEGADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----cee----eecccc-cchhh-hcCCCCEEEECCCCCcc
Confidence 689999999999999999999999999999876543211 001 122322 23333 35789999999997542
Q ss_pred CCCCCC--CCCchhHHHHHHHHHHHHHhcc-CCC--eEEEEcccccccc
Q 028043 165 PSRRWD--GDNTPEKVDWEGVRNLVSALPS-SLK--RIVLVSSVGVTKF 208 (214)
Q Consensus 165 ~~~~~~--~~~~~~~vNv~g~~~l~~a~~~-~~~--~iV~vSS~~~~~~ 208 (214)
. ..+. .....+++|+.++.+++++++. +.+ .+|+.||.+.|+.
T Consensus 71 ~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~ 118 (292)
T TIGR01777 71 D-KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGT 118 (292)
T ss_pred c-ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCC
Confidence 1 1222 2234568899999999999954 443 4566666666663
No 278
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.40 E-value=1.8e-12 Score=121.01 Aligned_cols=105 Identities=19% Similarity=0.177 Sum_probs=79.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~A 159 (214)
..|+||||||+|+||++++++|.++|++|.. ..+|++|.+.+.+.+- .++|+|||+|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~----------------------~~~~l~d~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY----------------------GKGRLEDRSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEe----------------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence 4578999999999999999999999998731 1145777777765322 2799999999
Q ss_pred CCCCCCCC--CCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 160 GTTAFPSR--RWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~--~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
+....+.. ...++...+++|+.|+.+++++++. +. ++|++||..+|++
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~ 487 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEY 487 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecC
Confidence 98753322 1235567789999999999999955 55 5677888777653
No 279
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.36 E-value=2.9e-12 Score=109.57 Aligned_cols=122 Identities=21% Similarity=0.286 Sum_probs=88.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChh------HHHHHhc------ccCCCCEEEEEecCCChhc-cch--
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE------KATTLFG------KQDEETLQVCKGDTRNPKD-LDP-- 146 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~------~~~~~~~------~~~~~~~~~v~~Di~d~~~-v~~-- 146 (214)
+++++|||||++|..+..+|+.+ ..+|+++.|-.+ ++++... +....+++++.+|++.++- +.+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 47999999999999999999875 459999998543 2222222 1225679999999985431 221
Q ss_pred --hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 147 --AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 147 --~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
.+.+.+|.|||||+..+. .....+....||.||..+++.+.. +.|.+.||||++++..
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~----v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~ 141 (382)
T COG3320 81 WQELAENVDLIIHNAALVNH----VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGET 141 (382)
T ss_pred HHHHhhhcceEEecchhhcc----cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccc
Confidence 124579999999997652 123345568899999999997755 4677999999998764
No 280
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.33 E-value=3e-11 Score=105.18 Aligned_cols=132 Identities=40% Similarity=0.546 Sum_probs=94.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc-ccCCCCEEEEEecCCChhccchhhhC----CC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG-KQDEETLQVCKGDTRNPKDLDPAIFE----GV 152 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~v~~Di~d~~~v~~~~~~----~~ 152 (214)
.+.+.++|+|+||+|++|+.+++.|+++|+.|.++.|+.++.+.+.. .........+..|.....++...+.+ ..
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence 45567899999999999999999999999999999999988877654 22233445556665555444432333 23
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccCCCCC
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW 213 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~~~p~ 213 (214)
.+++-++|-.. ..+ +....+.|...|+.++++||+ .+++|+|++||+++-.++..+|
T Consensus 155 ~~v~~~~ggrp--~~e--d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~ 212 (411)
T KOG1203|consen 155 VIVIKGAGGRP--EEE--DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPN 212 (411)
T ss_pred eeEEecccCCC--Ccc--cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCch
Confidence 45666665432 221 233445789999999999995 6999999999998876665544
No 281
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.28 E-value=1.1e-11 Score=102.26 Aligned_cols=126 Identities=17% Similarity=0.212 Sum_probs=100.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH----Hhc--ccCCCCEEEEEecCCChhccchhhh-CCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFG--KQDEETLQVCKGDTRNPKDLDPAIF-EGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~--~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d 153 (214)
++|++||||-||.-|+.|++.|+++||.|.++.|+.+.... +.+ ...+.++..+.+|++|...+.+.+- -++|
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 36899999999999999999999999999999987443211 111 1124558899999999999887542 2799
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vSS~~~~~ 207 (214)
-|+|.|+.++++ ..|+.+....+++-.|+.+++++++. + ..|+...||.--||
T Consensus 81 EIYNLaAQS~V~-vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG 136 (345)
T COG1089 81 EIYNLAAQSHVG-VSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYG 136 (345)
T ss_pred hheecccccccc-ccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhc
Confidence 999999998854 56788888889999999999999954 2 35888888887776
No 282
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.27 E-value=1.8e-11 Score=100.73 Aligned_cols=112 Identities=24% Similarity=0.366 Sum_probs=77.2
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF 164 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~~~ 164 (214)
|+||||||+||++++.+|.+.||+|+++.|++.+.+.... ..+ ...+.+.+..-.++|+|||.||....
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~----~~v-------~~~~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH----PNV-------TLWEGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC----ccc-------cccchhhhcccCCCCEEEECCCCccc
Confidence 6899999999999999999999999999999877654321 111 12223333211279999999998753
Q ss_pred CCCCCCCC--CchhHHHHHHHHHHHHHhc---cCCCeEEEEcccccccc
Q 028043 165 PSRRWDGD--NTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 165 ~~~~~~~~--~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~~ 208 (214)
...|... +...+..+..|..+.+++. .+.+.+|.-|.++.||.
T Consensus 70 -~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~ 117 (297)
T COG1090 70 -ERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGH 117 (297)
T ss_pred -cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecC
Confidence 2345544 3334556888999988773 34556676666666664
No 283
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.25 E-value=3e-11 Score=98.40 Aligned_cols=104 Identities=31% Similarity=0.421 Sum_probs=78.8
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||+|.+|+.+++.|++.|++|.++.|++.. .+++. ..+++++.+|+.|++++.+ .+.++|.||++.+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----~~g~~vv~~d~~~~~~l~~-al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----ALGAEVVEADYDDPESLVA-ALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----HTTTEEEES-TT-HHHHHH-HHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----cccceEeecccCCHHHHHH-HHcCCceEEeecCcc
Confidence 7999999999999999999999999999998743 33332 3467889999999999997 489999999988854
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEcccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~ 206 (214)
. ........++++|+ +.+++++|+.|....+
T Consensus 76 ~-------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~ 107 (233)
T PF05368_consen 76 H-------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADY 107 (233)
T ss_dssp C-------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGT
T ss_pred h-------------hhhhhhhhhHHHhhhccccceEEEEEecccc
Confidence 2 11234567889988 4589999865544443
No 284
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.1e-10 Score=96.61 Aligned_cols=114 Identities=32% Similarity=0.378 Sum_probs=92.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
++|+||||||++|++++++|+++|++|++..|+++...... .++++..+|+.+++.+.. .+.+.|.+++..+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-----~~v~~~~~d~~~~~~l~~-a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGDLRDPKSLVA-GAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-----CCcEEEEeccCCHhHHHH-HhccccEEEEEeccc
Confidence 47999999999999999999999999999999999887754 568899999999999986 478999999999865
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
. +. . ...........+..+++..+..+++.+|...+....
T Consensus 75 ~-~~----~--~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~ 114 (275)
T COG0702 75 D-GS----D--AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAAS 114 (275)
T ss_pred c-cc----c--chhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCC
Confidence 3 21 1 234556666677777766677889999988765433
No 285
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.21 E-value=4.3e-11 Score=119.61 Aligned_cols=121 Identities=18% Similarity=0.221 Sum_probs=88.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC----CeEEEEEcChhHHH---HHhccc---------CCCCEEEEEecCCChh---
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKAT---TLFGKQ---------DEETLQVCKGDTRNPK--- 142 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~---~~~~~~---------~~~~~~~v~~Di~d~~--- 142 (214)
.++|+||||+|+||.+++++|+++| ++|+++.|+....+ .+.+.. ...+++++.+|++++.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5899999999999999999999887 78999999743322 111100 0136888999998652
Q ss_pred ---ccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 143 ---DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 143 ---~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
..+. +..++|+|||||+..... .........|+.|+.+++++++ .+.++++++||.++++
T Consensus 1051 ~~~~~~~-l~~~~d~iiH~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443 1051 SDEKWSD-LTNEVDVIIHNGALVHWV----YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALD 1114 (1389)
T ss_pred CHHHHHH-HHhcCCEEEECCcEecCc----cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecC
Confidence 2222 346799999999976421 1222334679999999999884 4678999999998875
No 286
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.18 E-value=7.9e-11 Score=97.27 Aligned_cols=123 Identities=20% Similarity=0.208 Sum_probs=97.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+..|-++-|.||||++|+.++.+|++.|-+|++-.|..+ ....++-.-+-.++.+...|+.|++++++ +.+.-++||
T Consensus 57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~-vvk~sNVVI 135 (391)
T KOG2865|consen 57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRA-VVKHSNVVI 135 (391)
T ss_pred ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHH-HHHhCcEEE
Confidence 3456778999999999999999999999999999988543 33333322223468889999999999997 478899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVT 206 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~ 206 (214)
|..|--. + .....+.++|+.++..+++.|++ ++.|+|++|+.++.
T Consensus 136 NLIGrd~-e----Tknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan 181 (391)
T KOG2865|consen 136 NLIGRDY-E----TKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN 181 (391)
T ss_pred Eeecccc-c----cCCcccccccchHHHHHHHHHHhhChhheeehhhcccc
Confidence 9999643 1 23345679999999999999965 89999999998753
No 287
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.15 E-value=3.1e-10 Score=89.25 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=74.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
|+++||||+|++ .+++++|+++|++|++++|++++.+++...+. ...+.++.+|++|++++++++ ++++|.+
T Consensus 1 m~vlVtGGtG~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGML-KRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 479999999655 56999999999999999999887776554332 346778899999999988743 3467777
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC----eEEEEccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK----RIVLVSSVGV 205 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~----~iV~vSS~~~ 205 (214)
|+.+- +.++.++.+++++ +++ +++++=...+
T Consensus 80 v~~vh-------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~ 115 (177)
T PRK08309 80 VAWIH-------------------SSAKDALSVVCRELDGSSETYRLFHVLGSAA 115 (177)
T ss_pred EEecc-------------------ccchhhHHHHHHHHccCCCCceEEEEeCCcC
Confidence 75553 3356778887743 555 6776644333
No 288
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.07 E-value=2.3e-10 Score=93.76 Aligned_cols=96 Identities=19% Similarity=0.156 Sum_probs=75.4
Q ss_pred HHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---hCCCcEEEeccCCCCCCCCCCCCCCc
Q 028043 98 VVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVICCTGTTAFPSRRWDGDNT 174 (214)
Q Consensus 98 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~~~~d~li~~Ag~~~~~~~~~~~~~~ 174 (214)
++++|+++|++|++++|++++.+. .+++++|++|.+++++++ .+++|+||||||.... ...+.
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~---------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~-----~~~~~ 66 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL---------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT-----APVEL 66 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh---------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-----CCHHH
Confidence 478999999999999998765421 245789999999988743 2479999999997531 24556
Q ss_pred hhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 175 PEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 175 ~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
.+++|+.|+..+++++.+ ..++||++||.++++
T Consensus 67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAE 102 (241)
T ss_pred hhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhc
Confidence 789999999999998732 237999999998874
No 289
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.04 E-value=1e-09 Score=95.17 Aligned_cols=81 Identities=17% Similarity=0.182 Sum_probs=61.7
Q ss_pred CCCEEEEEcCchHHHHH--HHHHHHHCCCeEEEEEcChh--H-------------HHHHhcccCCCCEEEEEecCCChhc
Q 028043 81 SSKLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRDPE--K-------------ATTLFGKQDEETLQVCKGDTRNPKD 143 (214)
Q Consensus 81 ~~k~vlITGasggIG~~--la~~L~~~G~~V~~~~r~~~--~-------------~~~~~~~~~~~~~~~v~~Di~d~~~ 143 (214)
.+|++||||+++|||.+ ++++| +.|++|+++++..+ . .++..+.. +..+..+.+|++++++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence 46999999999999999 89999 99999988885321 1 12222221 3346678999999998
Q ss_pred cchhh------hCCCcEEEeccCCCC
Q 028043 144 LDPAI------FEGVTHVICCTGTTA 163 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~ 163 (214)
+++.+ ++++|+||||+|...
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCC
Confidence 87633 678999999999863
No 290
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.02 E-value=3.6e-09 Score=82.35 Aligned_cols=109 Identities=19% Similarity=0.343 Sum_probs=86.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|.|.||+|-+|++++++..++||+|+++.|++++.... .++.+++.|+.|++++.. .+.+.|+||..-|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------~~~~i~q~Difd~~~~a~-~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLAS-DLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------ccceeecccccChhhhHh-hhcCCceEEEeccCC
Confidence 5799999999999999999999999999999999987653 356789999999999876 478899999988765
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~ 207 (214)
.. +. ..........+++.++. ++.|++.++-.+...
T Consensus 74 ~~------~~---~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~ 110 (211)
T COG2910 74 AS------DN---DELHSKSIEALIEALKGAGVPRLLVVGGAGSLE 110 (211)
T ss_pred CC------Ch---hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceE
Confidence 31 11 12234446677787765 889999998776553
No 291
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.00 E-value=3.2e-10 Score=93.52 Aligned_cols=127 Identities=20% Similarity=0.202 Sum_probs=94.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh-hCCCcEEEe
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVIC 157 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~~~~d~li~ 157 (214)
|.++||||.|+||+..+..+... .++.+.++.-. +.+..+.+....++..++++|+.|...+.... ...+|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 78999999999999999999875 45555443311 11333322233678899999999988877532 247999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccccCC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~~~~ 210 (214)
.|+..++.. .+.+.......|+.++..++++++. +.+++|++||..+||...
T Consensus 87 faa~t~vd~-s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~ 140 (331)
T KOG0747|consen 87 FAAQTHVDR-SFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSD 140 (331)
T ss_pred hHhhhhhhh-hcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcc
Confidence 999887432 3344455668899999999999853 678999999999999754
No 292
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.99 E-value=1.7e-10 Score=92.46 Aligned_cols=128 Identities=19% Similarity=0.089 Sum_probs=84.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++|.+|+||++.|||..++..+.+.+-+.....++. ...+.+.... +.......+|+++...+++.. .++.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~-gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAY-GDDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEe-cCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 468999999999999999999988887654444333 2222221111 122334556777655444321 3468
Q ss_pred cEEEeccCCCCCCC------CCCCCCCchhHHHHHHHHHHHHHh----ccC--CCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS------RRWDGDNTPEKVDWEGVRNLVSAL----PSS--LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~------~~~~~~~~~~~vNv~g~~~l~~a~----~~~--~~~iV~vSS~~~~~~~ 209 (214)
|++|||||...... .+.+.+.+++++|+.+..-+.+.+ +.. .+.+|++||.++..+.
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~ 152 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPF 152 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccc
Confidence 99999999876321 233445778899999988877754 222 4789999999886653
No 293
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.96 E-value=4.7e-09 Score=89.74 Aligned_cols=121 Identities=21% Similarity=0.168 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.++++|.|+|++|.||+.++..|+.+| .+++++|++....+. ..+..........+.+|+.++.+ .+.+.|+||+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a--~Dl~~~~~~~~v~~~td~~~~~~-~l~gaDvVVi 82 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVA--ADLSHIDTPAKVTGYADGELWEK-ALRGADLVLI 82 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccc--cchhhcCcCceEEEecCCCchHH-HhCCCCEEEE
Confidence 467899999999999999999998655 589999993322211 11111111334556766555343 3678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
+||....+.. ...+.+..|+..+.+++++++ .+.+++|+++|..+.
T Consensus 83 taG~~~~~~~---tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd 129 (321)
T PTZ00325 83 CAGVPRKPGM---TRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN 129 (321)
T ss_pred CCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 9998643222 234567899999999999984 588899999997654
No 294
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.87 E-value=4.4e-09 Score=93.11 Aligned_cols=123 Identities=24% Similarity=0.361 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC---CeEEEEEcChh------HHHHH-----hc----ccC--CCCEEEEEecCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPE------KATTL-----FG----KQD--EETLQVCKGDTR 139 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~------~~~~~-----~~----~~~--~~~~~~v~~Di~ 139 (214)
..+|+|+|||||||+|+-+++.|++.- .++.++-|... +++.. .+ ..+ -.++..+.||++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 467999999999999999999998754 26888877532 22111 11 111 135677889998
Q ss_pred Chhc-cc----hhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccc
Q 028043 140 NPKD-LD----PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVT 206 (214)
Q Consensus 140 d~~~-v~----~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~ 206 (214)
+++- +. +.+...+|+|||+|+...+. +..+....+|..||.++++.+++ ..+-+|++|+..+.
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFd----e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n 159 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRFD----EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN 159 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeeccc----hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee
Confidence 7642 21 12356899999999987642 23344568899999999998864 56789999998664
No 295
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.84 E-value=1.5e-08 Score=80.60 Aligned_cols=84 Identities=21% Similarity=0.202 Sum_probs=66.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++++++++|+||+|++|+.+++.|++.|++|++++|+.++.+++.+.+. ..+.....+|..+.+++.+ .+.+.|+||+
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~diVi~ 103 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAA-AIKGADVVFA 103 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHH-HHhcCCEEEE
Confidence 4567999999999999999999999999999999999988877655442 1234456678888888775 4678999998
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+.....
T Consensus 104 at~~g~ 109 (194)
T cd01078 104 AGAAGV 109 (194)
T ss_pred CCCCCc
Confidence 776443
No 296
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.84 E-value=7.7e-09 Score=90.93 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh
Q 028043 79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142 (214)
Q Consensus 79 ~~~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~ 142 (214)
+++||+++|||| +|++|+++|++|+++|++|++++++.+ .+. ..+ ...+|+++.+
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~------~~~--~~~~dv~~~~ 255 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT------PAG--VKRIDVESAQ 255 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC------CCC--cEEEccCCHH
Confidence 367899999999 777999999999999999999998752 110 112 3467999988
Q ss_pred ccchhh---hCCCcEEEeccCCCCC
Q 028043 143 DLDPAI---FEGVTHVICCTGTTAF 164 (214)
Q Consensus 143 ~v~~~~---~~~~d~li~~Ag~~~~ 164 (214)
++.+++ ++++|++|||||+..+
T Consensus 256 ~~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 256 EMLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred HHHHHHHHhcCCCCEEEEccccccc
Confidence 877654 4679999999998764
No 297
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.84 E-value=1.2e-08 Score=79.15 Aligned_cols=122 Identities=23% Similarity=0.224 Sum_probs=92.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+.+|.++|.||||-.|+.+.+.+++.+- +|+++.|++..-.+. +..+.....|....++.... +.++|++++
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-----~k~v~q~~vDf~Kl~~~a~~-~qg~dV~Fc 89 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-----DKVVAQVEVDFSKLSQLATN-EQGPDVLFC 89 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-----cceeeeEEechHHHHHHHhh-hcCCceEEE
Confidence 4568999999999999999999999885 799999885222211 34466677888888777653 678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccccCCC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL 211 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~~~~ 211 (214)
+-|...... ..+.++.++..-...+++++++ ++++|+.+||.++.....+
T Consensus 90 aLgTTRgka----GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrF 140 (238)
T KOG4039|consen 90 ALGTTRGKA----GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRF 140 (238)
T ss_pred eeccccccc----ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccce
Confidence 999876322 2345567777777888888864 8899999999988654433
No 298
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.83 E-value=2.3e-08 Score=87.04 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=67.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|+|+|.|| |+||+.++..|+++| .+|++.+|+.+++++..... ..+++..++|+.|.+++.+ ++.+.|+|||++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-~~~v~~~~vD~~d~~al~~-li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-GGKVEALQVDAADVDALVA-LIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-cccceeEEecccChHHHHH-HHhcCCEEEEeCC
Confidence 478999998 999999999999999 89999999999988875443 2378999999999999987 4677799999998
Q ss_pred CCC
Q 028043 161 TTA 163 (214)
Q Consensus 161 ~~~ 163 (214)
...
T Consensus 78 ~~~ 80 (389)
T COG1748 78 PFV 80 (389)
T ss_pred chh
Confidence 643
No 299
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.80 E-value=5.1e-09 Score=85.53 Aligned_cols=71 Identities=11% Similarity=0.193 Sum_probs=51.1
Q ss_pred EEEEEc-CchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEEE
Q 028043 84 LVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVI 156 (214)
Q Consensus 84 ~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~li 156 (214)
+=.||. ++||||+++|++|+++|++|+++++... .. .. ....+|+.+.+++++.+ ++++|++|
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~-------~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV 85 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK-------PE--PHPNLSIREIETTKDLLITLKELVQEHDILI 85 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc-------cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence 445665 4789999999999999999999886321 11 00 01347888887776532 46899999
Q ss_pred eccCCCCC
Q 028043 157 CCTGTTAF 164 (214)
Q Consensus 157 ~~Ag~~~~ 164 (214)
||||+...
T Consensus 86 nnAgv~d~ 93 (227)
T TIGR02114 86 HSMAVSDY 93 (227)
T ss_pred ECCEeccc
Confidence 99998653
No 300
>PLN00106 malate dehydrogenase
Probab=98.79 E-value=2.9e-08 Score=84.96 Aligned_cols=119 Identities=17% Similarity=0.134 Sum_probs=82.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
..++|.||||+|.||..++..|+.+|. +++++++++...+. . .+..........++++.+++.+ .+.+.|+||+.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a-~-Dl~~~~~~~~i~~~~~~~d~~~-~l~~aDiVVit 93 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVA-A-DVSHINTPAQVRGFLGDDQLGD-ALKGADLVIIP 93 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeE-c-hhhhCCcCceEEEEeCCCCHHH-HcCCCCEEEEe
Confidence 447999999999999999999997665 79999997722111 1 1111111223345544545554 36889999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGV 205 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~ 205 (214)
||....+.. ...+....|+..+..+.++++ .+...+|+++|--+
T Consensus 94 AG~~~~~g~---~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv 138 (323)
T PLN00106 94 AGVPRKPGM---TRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV 138 (323)
T ss_pred CCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 998653332 234567889999999999884 57778888887654
No 301
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.77 E-value=2.6e-08 Score=84.21 Aligned_cols=82 Identities=16% Similarity=0.100 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh---hHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP---EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~---~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
+++|+++|+|| ||+|++++..|++.|++ |++++|+. ++.+++.+++. ...+.+..+|+.+.++++. .+...|
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~-~~~~~D 201 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKA-EIASSD 201 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHh-hhccCC
Confidence 46789999998 79999999999999996 99999986 66666554442 2234556789988777765 356789
Q ss_pred EEEeccCCCC
Q 028043 154 HVICCTGTTA 163 (214)
Q Consensus 154 ~li~~Ag~~~ 163 (214)
+|||+-.+..
T Consensus 202 ilINaTp~Gm 211 (289)
T PRK12548 202 ILVNATLVGM 211 (289)
T ss_pred EEEEeCCCCC
Confidence 9999886654
No 302
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.71 E-value=2.7e-08 Score=81.36 Aligned_cols=74 Identities=11% Similarity=0.267 Sum_probs=50.1
Q ss_pred EEEEEc-CchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhCCCcEEEeccC
Q 028043 84 LVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 84 ~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~~~d~li~~Ag 160 (214)
+-.||+ +||+||++++++|+++|++|++++|+..... ....++.++.++-.+ .+.+.+ .++++|+||||||
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-----~~~~~v~~i~v~s~~~m~~~l~~-~~~~~DivIh~AA 90 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-----EPHPNLSIIEIENVDDLLETLEP-LVKDHDVLIHSMA 90 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-----CCCCCeEEEEEecHHHHHHHHHH-HhcCCCEEEeCCc
Confidence 456664 5677999999999999999999987643211 012345666544332 123333 3578999999999
Q ss_pred CCC
Q 028043 161 TTA 163 (214)
Q Consensus 161 ~~~ 163 (214)
+..
T Consensus 91 vsd 93 (229)
T PRK06732 91 VSD 93 (229)
T ss_pred cCC
Confidence 875
No 303
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.69 E-value=7.7e-08 Score=84.34 Aligned_cols=76 Identities=30% Similarity=0.485 Sum_probs=61.8
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|.|| |++|+.+++.|++++. +|++.+|+.++++++.+.+...++..+++|+.|.+++++ ++.+.|+|||++|..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAE-LLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHH-HHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHH-HHhcCCEEEECCccc
Confidence 789999 9999999999999874 899999999999888766556789999999999999887 578899999999975
No 304
>PRK09620 hypothetical protein; Provisional
Probab=98.67 E-value=3.4e-08 Score=80.75 Aligned_cols=82 Identities=18% Similarity=0.282 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCc----------------hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc
Q 028043 80 SSSKLVLVAGGS----------------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143 (214)
Q Consensus 80 ~~~k~vlITGas----------------ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~ 143 (214)
+.||+|+||+|. |+||+++|++|+++|++|+++++......... .....+..+.+|....+.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~--~~~~~~~~V~s~~d~~~~ 78 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDI--NNQLELHPFEGIIDLQDK 78 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCccc--CCceeEEEEecHHHHHHH
Confidence 368999999886 99999999999999999999886432111100 001223345553333345
Q ss_pred cchhhh--CCCcEEEeccCCCCC
Q 028043 144 LDPAIF--EGVTHVICCTGTTAF 164 (214)
Q Consensus 144 v~~~~~--~~~d~li~~Ag~~~~ 164 (214)
+.+. + .++|+|||+|++..+
T Consensus 79 l~~~-~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 79 MKSI-ITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HHHH-hcccCCCEEEECccccce
Confidence 5553 4 368999999999774
No 305
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.60 E-value=4.9e-07 Score=72.88 Aligned_cols=126 Identities=11% Similarity=0.108 Sum_probs=83.6
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
..++||++||+|-. ..|+..+++.|.+.|+++..+..++. +.+++.+++. ...+++||+++.++++..+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHHH
Confidence 35789999999954 69999999999999999999887763 2333433332 2456899999999988633
Q ss_pred --hCCCcEEEeccCCCCCCC-------CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccc
Q 028043 149 --FEGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGV 205 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~-------~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~ 205 (214)
++.+|.|||+.|...-.. ..-+.....+++-..+...+++++++ ..+.+|.++=.++
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs 148 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS 148 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc
Confidence 568999999999875111 01111122223444445556666643 3456776665443
No 306
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.58 E-value=2.9e-07 Score=79.07 Aligned_cols=115 Identities=14% Similarity=0.079 Sum_probs=72.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC-------CeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN-------IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
.+|+||||+|+||++++..|+..+ .+|+++++++.. ++...-.+... ......|+....++.+ .+.++|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-~~~~~~~~~~~~~~~~-~l~~aD 80 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-AFPLLKSVVATTDPEE-AFKDVD 80 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-cccccCCceecCCHHH-HhCCCC
Confidence 369999999999999999998844 589999996531 22111011000 0011235444455443 367999
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSS 202 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS 202 (214)
+|||.||....+ .++-.+.++.|+.-...+.+.+++. ...+|.+|.
T Consensus 81 iVI~tAG~~~~~---~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 81 VAILVGAMPRKE---GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred EEEEeCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 999999986422 1233556788999888888777432 345555553
No 307
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.55 E-value=1.2e-07 Score=83.08 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=69.0
Q ss_pred CCCCCEEEEEcC---------------c-hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh
Q 028043 79 ASSSKLVLVAGG---------------S-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142 (214)
Q Consensus 79 ~~~~k~vlITGa---------------s-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~ 142 (214)
+++||+++|||| | |.+|.+++++|..+|++|+++.++.... . ... ....|+++.+
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~-~~~--~~~~~v~~~~ 252 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T-PPG--VKSIKVSTAE 252 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C-CCC--cEEEEeccHH
Confidence 367999999998 3 4599999999999999999988765321 1 122 2457898888
Q ss_pred ccchhh----hCCCcEEEeccCCCCCCC-CCC----CCCCchhHHHHHHHHHHHHHhc
Q 028043 143 DLDPAI----FEGVTHVICCTGTTAFPS-RRW----DGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 143 ~v~~~~----~~~~d~li~~Ag~~~~~~-~~~----~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
++.+++ ++++|++|||||+..+.. ... ......+.+|+.-+-.+++.++
T Consensus 253 ~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 253 EMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred HHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 773222 357999999999986522 111 1111123455555656666553
No 308
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.52 E-value=6.6e-07 Score=67.21 Aligned_cols=79 Identities=25% Similarity=0.321 Sum_probs=61.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.++.+++++|.|| ||+|+.++..|.+.|++ |+++.|+.++++++.+.+.+..+.++. +.+ +.. ...+.|+||
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~~~---~~~-~~~~~DivI 80 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--LED---LEE-ALQEADIVI 80 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--GGG---HCH-HHHTESEEE
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--HHH---HHH-HHhhCCeEE
Confidence 3567899999996 99999999999999997 999999999999988777444454443 333 333 356799999
Q ss_pred eccCCCC
Q 028043 157 CCTGTTA 163 (214)
Q Consensus 157 ~~Ag~~~ 163 (214)
++.+...
T Consensus 81 ~aT~~~~ 87 (135)
T PF01488_consen 81 NATPSGM 87 (135)
T ss_dssp E-SSTTS
T ss_pred EecCCCC
Confidence 9988764
No 309
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.51 E-value=1.7e-07 Score=76.35 Aligned_cols=125 Identities=19% Similarity=0.238 Sum_probs=92.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-----HHHHhcc---cCCCCEEEEEecCCChhccchhhh-CCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGK---QDEETLQVCKGDTRNPKDLDPAIF-EGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~---~~~~~~~~v~~Di~d~~~v~~~~~-~~~ 152 (214)
.|+.||||-+|.=|+.+++.|+.+|++|.++.|+.+. .+.+... ..+.......+|++|...+.+.+- -.+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 3689999999999999999999999999999887554 3333211 113456778899999998887432 268
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc----CCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~----~~~~iV~vSS~~~~~ 207 (214)
+-++|.|+.+++. ..++-++..-++...|+..+++|.+. ..-|+-..|+.--||
T Consensus 108 tEiYnLaAQSHVk-vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyG 165 (376)
T KOG1372|consen 108 TEVYNLAAQSHVK-VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYG 165 (376)
T ss_pred hhhhhhhhhcceE-EEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcc
Confidence 9999999998843 23344445568888999999998842 223677778777776
No 310
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.50 E-value=4e-07 Score=78.34 Aligned_cols=74 Identities=20% Similarity=0.263 Sum_probs=57.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHC-C-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSR-N-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++.+|+|+||||+|.||+.++++|+++ | .+++++.|+.+++.++..++. .+|+.+ +.+ .+.++|+||
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-------~~~i~~---l~~-~l~~aDiVv 220 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-------GGKILS---LEE-ALPEADIVV 220 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-------cccHHh---HHH-HHccCCEEE
Confidence 567899999999999999999999864 5 589999999888877654432 234433 333 367899999
Q ss_pred eccCCCC
Q 028043 157 CCTGTTA 163 (214)
Q Consensus 157 ~~Ag~~~ 163 (214)
|+++...
T Consensus 221 ~~ts~~~ 227 (340)
T PRK14982 221 WVASMPK 227 (340)
T ss_pred ECCcCCc
Confidence 9999743
No 311
>PRK05086 malate dehydrogenase; Provisional
Probab=98.50 E-value=1.1e-06 Score=75.02 Aligned_cols=116 Identities=23% Similarity=0.234 Sum_probs=74.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHH---CCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
|+|+|.||+|+||++++..|.. .++.+++++|++.. +...-.+.. .....+.+ .+.+++.+ .+.++|+||.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~~i~~--~~~~d~~~-~l~~~DiVIit 76 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAVKIKG--FSGEDPTP-ALEGADVVLIS 76 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCceEEE--eCCCCHHH-HcCCCCEEEEc
Confidence 5899999999999999998854 34578888987532 110001111 11112222 22233333 24679999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGV 205 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~ 205 (214)
+|..+.+. ..-.+.+..|......++++++ .+.+++|.+.|--+
T Consensus 77 aG~~~~~~---~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 77 AGVARKPG---MDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV 121 (312)
T ss_pred CCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence 99865322 2334567889999999999985 46777877777533
No 312
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.48 E-value=1.6e-07 Score=75.59 Aligned_cols=106 Identities=22% Similarity=0.207 Sum_probs=79.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI 156 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li 156 (214)
+|+|+|||++|-+|++|.+.+...|. +.+..+. -.+|+++.++.+. +|. ++..||
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------kd~DLt~~a~t~~-lF~~ekPthVI 60 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------KDADLTNLADTRA-LFESEKPTHVI 60 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------ccccccchHHHHH-HHhccCCceee
Confidence 47899999999999999999988776 2222111 2378999888886 454 689999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~ 207 (214)
|.|+....--.......+++..|+.-.-|++..+ ..+++++|+..|.+.|.
T Consensus 61 hlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfP 112 (315)
T KOG1431|consen 61 HLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFP 112 (315)
T ss_pred ehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecC
Confidence 9998765211223345667788888888888866 67999999999988875
No 313
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.40 E-value=1.2e-06 Score=78.23 Aligned_cols=77 Identities=21% Similarity=0.244 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+++|+|+|+|+++ +|.++++.|+++|++|++.+++. +..++..+++...++.++.+|..+. ..+++|+||+
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~d~vv~ 74 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE------FLEGVDLVVV 74 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh------HhhcCCEEEE
Confidence 35689999999877 99999999999999999999975 3343333333333566777888761 2467999999
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
++|..
T Consensus 75 ~~g~~ 79 (450)
T PRK14106 75 SPGVP 79 (450)
T ss_pred CCCCC
Confidence 99975
No 314
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=98.34 E-value=5.3e-07 Score=73.08 Aligned_cols=121 Identities=13% Similarity=0.112 Sum_probs=86.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-CCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLS-RNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~-~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~ 157 (214)
+-.+|||||+-|.+|..+|..|.. .|.+ |++.+..... +.+. ..-.++..|+.|...+++.+. .++|.+||
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~-----~~GPyIy~DILD~K~L~eIVVn~RIdWL~H 116 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT-----DVGPYIYLDILDQKSLEEIVVNKRIDWLVH 116 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc-----ccCCchhhhhhccccHHHhhcccccceeee
Confidence 345899999999999999999976 4765 6655543221 1221 112367789999999987554 47999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
..+....- . ..+..-..++|+.|..|+++.+++..-++..-|+++++|+.
T Consensus 117 fSALLSAv-G-E~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPt 166 (366)
T KOG2774|consen 117 FSALLSAV-G-ETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPT 166 (366)
T ss_pred HHHHHHHh-c-ccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCC
Confidence 88764311 1 12333456899999999999887666678888999999864
No 315
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.17 E-value=2.3e-06 Score=73.02 Aligned_cols=80 Identities=21% Similarity=0.342 Sum_probs=66.9
Q ss_pred EEEEEcCchHHHHHHHHHHHH----CCCeEEEEEcChhHHHHHhcccC---C---CCEEEEEecCCChhccchhhhCCCc
Q 028043 84 LVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDPEKATTLFGKQD---E---ETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
-++|-||+|+-|..+++++.+ .|..+-+.+|+++++++..+... + ....++.+|.+|++++.+ +..+..
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~e-mak~~~ 85 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDE-MAKQAR 85 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHH-HHhhhE
Confidence 489999999999999999999 78899999999999988755433 1 122378899999999997 467899
Q ss_pred EEEeccCCCCC
Q 028043 154 HVICCTGTTAF 164 (214)
Q Consensus 154 ~li~~Ag~~~~ 164 (214)
+|+||+|....
T Consensus 86 vivN~vGPyR~ 96 (423)
T KOG2733|consen 86 VIVNCVGPYRF 96 (423)
T ss_pred EEEecccccee
Confidence 99999998653
No 316
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.16 E-value=1.6e-05 Score=68.24 Aligned_cols=102 Identities=17% Similarity=0.161 Sum_probs=68.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCCh-----------hc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNP-----------KD 143 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~-----------~~ 143 (214)
+|.||||+|.||+.++..|+..|. +++++++++ +.++ ....|+.|. ..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~------------g~~~Dl~d~~~~~~~~~~i~~~ 69 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE------------GVVMELQDCAFPLLKGVVITTD 69 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc------------eeeeehhhhcccccCCcEEecC
Confidence 689999999999999999998653 599999976 3222 223344333 12
Q ss_pred cchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccC--C-CeEEEEc
Q 028043 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS--L-KRIVLVS 201 (214)
Q Consensus 144 v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~--~-~~iV~vS 201 (214)
..+ .+.++|+||+.||....+. ++-.+.+..|+.-...+.+.+++. . ..+|.+|
T Consensus 70 ~~~-~~~~aDiVVitAG~~~~~g---~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 70 PEE-AFKDVDVAILVGAFPRKPG---MERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred hHH-HhCCCCEEEEeCCCCCCcC---CcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 222 3678999999999865322 233456688988888888887432 3 3455554
No 317
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.14 E-value=6.2e-05 Score=56.93 Aligned_cols=110 Identities=14% Similarity=0.138 Sum_probs=71.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++|.|.||+|.+|++++..|...+. ++++++++++.++....++. .......... .+.++ +.+.|++|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~~-----~~~aDivv 74 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDYEA-----LKDADIVV 74 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSGGG-----GTTESEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-ccccc-----cccccEEE
Confidence 5799999999999999999998864 79999999876554322221 1112221111 33332 45789999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
..||....+. +.-.+.+..|..-...+.+.+.+ .. ..++.+|
T Consensus 75 itag~~~~~g---~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 75 ITAGVPRKPG---MSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp ETTSTSSSTT---SSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred Eecccccccc---ccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 9999865322 23345567888888888887743 33 3455554
No 318
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.13 E-value=1.8e-05 Score=67.99 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=69.1
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh-----------ccc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-----------DLD 145 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~-----------~v~ 145 (214)
+|.|+||+|.||+.++..|+..|. +++++++++... ..+....|+.|.. +..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~----------~a~g~~~Dl~d~~~~~~~~~~~~~~~~ 70 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK----------VLEGVVMELMDCAFPLLDGVVPTHDPA 70 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc----------ccceeEeehhcccchhcCceeccCChH
Confidence 489999999999999999988554 599999865421 0112233444333 212
Q ss_pred hhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccC--C-CeEEEEc
Q 028043 146 PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS--L-KRIVLVS 201 (214)
Q Consensus 146 ~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~--~-~~iV~vS 201 (214)
+ .+.+.|+||+.||....+ .++..+.+..|+.-...+.+.+++. . ..+|.+|
T Consensus 71 ~-~~~~aDiVVitAG~~~~~---~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 71 V-AFTDVDVAILVGAFPRKE---GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred H-HhCCCCEEEEcCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 2 367899999999986422 2233556788999999999888442 3 4555555
No 319
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.13 E-value=1.5e-05 Score=60.72 Aligned_cols=76 Identities=24% Similarity=0.211 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.++++++|+|+ |++|+.+++.|++.| ++|.+.+|++++.+++.+.+.... +..+..+.+++ .+++|+||++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG---IAIAYLDLEEL----LAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc---cceeecchhhc----cccCCEEEeC
Confidence 35689999997 899999999999996 789999999988777655432111 22334443322 4679999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.....
T Consensus 89 ~~~~~ 93 (155)
T cd01065 89 TPVGM 93 (155)
T ss_pred cCCCC
Confidence 98654
No 320
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.08 E-value=1.9e-05 Score=64.44 Aligned_cols=76 Identities=25% Similarity=0.392 Sum_probs=63.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
|+++|.| .|-+|+.+|+.|.+.|++|+++++++++.++.... ......+.+|-+|++.++++-....|+++-.-|.
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~--~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD--ELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh--hcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 5688888 78999999999999999999999999998774321 2357889999999999998656789999977764
No 321
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=98.05 E-value=2.2e-05 Score=56.89 Aligned_cols=71 Identities=30% Similarity=0.439 Sum_probs=58.5
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|+|.|. |.+|+.+++.|.+.+.+|++++++++..+++.+ .++.++.+|.+|++.++++-..+.+.+|-...
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----EGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----TTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----cccccccccchhhhHHhhcCccccCEEEEccC
Confidence 578885 689999999999987799999999998877653 34789999999999999866678998887764
No 322
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.04 E-value=3e-05 Score=65.16 Aligned_cols=77 Identities=21% Similarity=0.246 Sum_probs=55.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
...+|+++|+|+ ||+|+++++.|++.| .+|++++|+.++.+++.+.+.... .+..+. +..+ ...+.|+|||
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~--~~~~~~----~~~~-~~~~~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG--KAELDL----ELQE-ELADFDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ceeecc----cchh-ccccCCEEEE
Confidence 356789999996 999999999999999 689999999998888766543211 011111 1122 2467899999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+.....
T Consensus 192 aTp~g~ 197 (278)
T PRK00258 192 ATSAGM 197 (278)
T ss_pred CCcCCC
Confidence 987654
No 323
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.97 E-value=1.7e-05 Score=65.91 Aligned_cols=75 Identities=13% Similarity=0.187 Sum_probs=57.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag~ 161 (214)
|+|+|+||||. |+.++++|.+.|++|++..+++...+.+. ..+...+..+..|.+++.+.+- .++|+||+.+..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQALTVHTGALDPQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence 57999999998 99999999999999999999887554433 1223345566777787766432 369999999876
Q ss_pred C
Q 028043 162 T 162 (214)
Q Consensus 162 ~ 162 (214)
.
T Consensus 76 f 76 (256)
T TIGR00715 76 F 76 (256)
T ss_pred H
Confidence 4
No 324
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.96 E-value=3e-05 Score=61.38 Aligned_cols=76 Identities=17% Similarity=0.309 Sum_probs=47.5
Q ss_pred CCCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc
Q 028043 80 SSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143 (214)
Q Consensus 80 ~~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~ 143 (214)
++||+||||+| ||..|.++|+++..+|++|+++..... .+. ..++..+. +...++
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~------p~~~~~i~--v~sa~e 71 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP------PPGVKVIR--VESAEE 71 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------TTEEEEE---SSHHH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc------cccceEEE--ecchhh
Confidence 36788888865 589999999999999999999987642 211 23455444 555555
Q ss_pred cchhh---hCCCcEEEeccCCCCC
Q 028043 144 LDPAI---FEGVTHVICCTGTTAF 164 (214)
Q Consensus 144 v~~~~---~~~~d~li~~Ag~~~~ 164 (214)
+.+++ +...|++|++|++..+
T Consensus 72 m~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 72 MLEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp HHHHHHHHGGGGSEEEE-SB--SE
T ss_pred hhhhhccccCcceeEEEecchhhe
Confidence 54433 4568999999999874
No 325
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.95 E-value=6.3e-05 Score=64.41 Aligned_cols=110 Identities=14% Similarity=0.166 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
..+++|.|+|+ |.||..++..|+..|. ++.+++++++.++.....+.. .++... . .+ .+ .+.+.
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~---~~--~~~~a 74 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD---YS--DCKDA 74 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC---HH--HhCCC
Confidence 35679999998 9999999999999887 799999988766543332221 122211 1 12 22 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|++|..||....+. ++-.+.+..|..-...+++.+++ . ...++.+|
T Consensus 75 divIitag~~~k~g---~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 75 DLVVITAGAPQKPG---ETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred CEEEEecCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 99999999865332 23345567788888887777643 3 34555555
No 326
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.93 E-value=4.6e-05 Score=68.03 Aligned_cols=74 Identities=22% Similarity=0.291 Sum_probs=61.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|+|+|.|+ |.+|+++++.|.+.|++|++++++++..+++.+ ..++.++.+|.++.+.++++-..++|.+|.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~---~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD---RLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh---hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence 47999997 999999999999999999999999988777643 135788999999988887643567888887664
No 327
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.93 E-value=5.8e-05 Score=63.13 Aligned_cols=74 Identities=22% Similarity=0.242 Sum_probs=54.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCC-EEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET-LQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+|+++|+|+ ||+|++++..|++.|++|++++|++++.+++.+.+.... ... .+..+ ....+.|+|||+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~--~~~~~------~~~~~~DivInat 186 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQA--FSMDE------LPLHRVDLIINAT 186 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEE--echhh------hcccCccEEEECC
Confidence 5689999997 799999999999999999999999988877765543211 121 11111 1134689999999
Q ss_pred CCCC
Q 028043 160 GTTA 163 (214)
Q Consensus 160 g~~~ 163 (214)
+...
T Consensus 187 p~gm 190 (270)
T TIGR00507 187 SAGM 190 (270)
T ss_pred CCCC
Confidence 8753
No 328
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.92 E-value=4.1e-05 Score=70.00 Aligned_cols=76 Identities=20% Similarity=0.171 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.. .. .++.+ ..+......|+|||+
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~---~~--~~~~~---~~~~~~~~~diiINt 446 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGG---QA--LTLAD---LENFHPEEGMILANT 446 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC---ce--eeHhH---hhhhccccCeEEEec
Confidence 456899999998 7999999999999999999999999888887655421 11 12222 121111246889988
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.....
T Consensus 447 T~vGm 451 (529)
T PLN02520 447 TSVGM 451 (529)
T ss_pred ccCCC
Confidence 87654
No 329
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.89 E-value=3.8e-05 Score=68.56 Aligned_cols=78 Identities=19% Similarity=0.155 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~ 157 (214)
++.+|+++|||+++ +|.++++.|++.|++|++.+++........+.+...++.+..++. ...+ .. ++|+||+
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~----~~~~~d~vV~ 74 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLEL----LDEDFDLMVK 74 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHHH----hcCcCCEEEE
Confidence 35689999999876 999999999999999999998653322221222222344433321 1111 22 4899999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
++|+..
T Consensus 75 s~gi~~ 80 (447)
T PRK02472 75 NPGIPY 80 (447)
T ss_pred CCCCCC
Confidence 999864
No 330
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.83 E-value=0.00013 Score=62.21 Aligned_cols=107 Identities=15% Similarity=0.156 Sum_probs=71.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
++|.|.|+ |++|+.++..|+..| .+|++++|++++.+.....+. ....... . .+.+ .+.+.|+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~-----~l~~aDI 71 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYS-----DCKDADI 71 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHH-----HhCCCCE
Confidence 47899995 999999999999999 589999999887765544331 1112221 1 2222 2468999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
+|+++|....+. ++-.+.+..|..-...+.+.+++ . ...++.+|
T Consensus 72 VIitag~~~~~g---~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 72 VVITAGAPQKPG---ETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred EEEccCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 999999764322 23344567788888888887743 2 34555555
No 331
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.83 E-value=9.7e-05 Score=65.93 Aligned_cols=78 Identities=26% Similarity=0.383 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
...++++|.|+ |.+|+.+++.|.+.|++|++++++++..+++.+.. .++.++.+|.++++.++++-..+.|.+|.+.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~--~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL--PNTLVLHGDGTDQELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC--CCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence 34689999996 99999999999999999999999998877765432 3467899999999988775567888888654
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
.
T Consensus 306 ~ 306 (453)
T PRK09496 306 N 306 (453)
T ss_pred C
Confidence 4
No 332
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.82 E-value=8.9e-05 Score=59.38 Aligned_cols=71 Identities=18% Similarity=0.093 Sum_probs=51.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.++++|+++|+|. |.+|+.+++.|.+.|++|++.++++++.+++.+.+. ... +|. +++. ..++|+++.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g---~~~--v~~---~~l~---~~~~Dv~vp 91 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFG---ATV--VAP---EEIY---SVDADVFAP 91 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC---CEE--Ecc---hhhc---cccCCEEEe
Confidence 3468899999996 689999999999999999999999988777654331 221 121 1111 126888887
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+|.
T Consensus 92 ~A~ 94 (200)
T cd01075 92 CAL 94 (200)
T ss_pred ccc
Confidence 775
No 333
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.81 E-value=8.2e-05 Score=63.54 Aligned_cols=112 Identities=20% Similarity=0.189 Sum_probs=69.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCe--EEEEEcCh--hHHHHHhcccCC----CCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDP--EKATTLFGKQDE----ETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~--~~~~~~~~~~~~----~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|+||+|.+|..++..|+..|.. |++++|++ ++++.....+.. .... .....+ .+.+ .+.+.|+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~--~d~~--~l~~aDi 75 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKIS--SDLS--DVAGSDI 75 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEEC--CCHH--HhCCCCE
Confidence 57999999999999999999999874 99999954 333221111110 0000 011111 1122 2568999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSS 202 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS 202 (214)
+|.++|....+. ++-.+....|+.-...+++.+.+ ....+|.+++
T Consensus 76 Viitag~p~~~~---~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 76 VIITAGVPRKEG---MSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred EEEecCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 999999754221 12234557788888888887743 2346777765
No 334
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.79 E-value=0.0001 Score=64.68 Aligned_cols=103 Identities=22% Similarity=0.287 Sum_probs=68.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+.++|.|.||||.+|+++++.|.++ +.+|..+.++.+..+.+... .......|+.+.++++...+.++|+||.+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~----~~~l~~~~~~~~~~~~~~~~~~~DvVf~Al 112 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV----FPHLITQDLPNLVAVKDADFSDVDAVFCCL 112 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh----CccccCccccceecCCHHHhcCCCEEEEcC
Confidence 4468999999999999999999988 67899988865543322211 111233455545555543357899999877
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~ 207 (214)
+.. ....++++++.+ .+||-+|+..-+.
T Consensus 113 p~~-------------------~s~~i~~~~~~g-~~VIDlSs~fRl~ 140 (381)
T PLN02968 113 PHG-------------------TTQEIIKALPKD-LKIVDLSADFRLR 140 (381)
T ss_pred CHH-------------------HHHHHHHHHhCC-CEEEEcCchhccC
Confidence 521 344555555433 6788888876543
No 335
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.66 E-value=7.7e-05 Score=63.37 Aligned_cols=77 Identities=19% Similarity=0.240 Sum_probs=62.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
..++|-||+|+.|.-++++|+.+|.+-.+.+|+..+++.+...+. .++. ..++-+++.+++ +..+.++|+||+|..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG-~~~~--~~p~~~p~~~~~-~~~~~~VVlncvGPy 82 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG-PEAA--VFPLGVPAALEA-MASRTQVVLNCVGPY 82 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC-cccc--ccCCCCHHHHHH-HHhcceEEEeccccc
Confidence 579999999999999999999999999999999999998776653 3333 334444777775 568899999999976
Q ss_pred C
Q 028043 163 A 163 (214)
Q Consensus 163 ~ 163 (214)
.
T Consensus 83 t 83 (382)
T COG3268 83 T 83 (382)
T ss_pred c
Confidence 4
No 336
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.65 E-value=0.00043 Score=59.84 Aligned_cols=78 Identities=24% Similarity=0.281 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh---------------------HHHHHhccc----CCCCEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---------------------KATTLFGKQ----DEETLQ 132 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~---------------------~~~~~~~~~----~~~~~~ 132 (214)
.+++++|+|.| .||+|+++++.|+..|. +++++|++.- +.+.+++.+ ....++
T Consensus 21 ~L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 35678999999 58899999999999998 7888988741 122221211 233456
Q ss_pred EEEecCCChhccchhhhCCCcEEEecc
Q 028043 133 VCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 133 ~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+..|++ .+.+++ ++.+.|+||.+.
T Consensus 100 ~~~~~~~-~~~~~~-~~~~~DlVid~~ 124 (338)
T PRK12475 100 PVVTDVT-VEELEE-LVKEVDLIIDAT 124 (338)
T ss_pred EEeccCC-HHHHHH-HhcCCCEEEEcC
Confidence 6667775 344554 467899998776
No 337
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.64 E-value=0.00014 Score=66.98 Aligned_cols=73 Identities=18% Similarity=0.252 Sum_probs=61.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|.| .|.+|++++++|.++|++|++++.|+++.++..+ .+...+.+|.+|++.++++-.++.|.++-..+
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----RGIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----CCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 4688888 7999999999999999999999999998887653 35788999999999998765668887775543
No 338
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.63 E-value=0.00022 Score=60.07 Aligned_cols=78 Identities=22% Similarity=0.231 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.++++++|.| +||.+++++..|++.|. +|+++.|+.++.+++.+.+..........+..+.+..+ ..|+|||+
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----~~dliINa 197 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----EADLLINA 197 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----ccCEEEEC
Confidence 3579999999 79999999999999995 79999999999998876665322111112222222221 57999998
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
-....
T Consensus 198 Tp~Gm 202 (283)
T COG0169 198 TPVGM 202 (283)
T ss_pred CCCCC
Confidence 87654
No 339
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.62 E-value=0.00021 Score=63.37 Aligned_cols=76 Identities=21% Similarity=0.236 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++.+|+|+|.|+ |++|+.+++.|++.|. +++++.|+.++.+++.+.+.. ... ...+++.. .+...|+||+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~~-----~~~~~l~~-~l~~aDiVI~ 248 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--ASA-----HYLSELPQ-LIKKADIIIA 248 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--CeE-----ecHHHHHH-HhccCCEEEE
Confidence 457899999995 9999999999999996 699999999988887765531 111 12233333 3567999999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+.+..+
T Consensus 249 aT~a~~ 254 (414)
T PRK13940 249 AVNVLE 254 (414)
T ss_pred CcCCCC
Confidence 998755
No 340
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.60 E-value=0.00029 Score=59.45 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCC--CCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE--ETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+|+|+|.| +||.|++++..|++.|. +|++++|+.++.+.+.+.+.. ....+.. . +++.+ .+.+.|+||
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~-~~~~aDiVI 197 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAA-ALAAADGLV 197 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHh-hhCCCCEEE
Confidence 4568999999 58899999999999998 699999999998887655421 1122211 1 22222 245789999
Q ss_pred ecc
Q 028043 157 CCT 159 (214)
Q Consensus 157 ~~A 159 (214)
|+.
T Consensus 198 naT 200 (284)
T PRK12549 198 HAT 200 (284)
T ss_pred ECC
Confidence 994
No 341
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.59 E-value=0.00054 Score=59.27 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh---------------------HHHHHhcc---c-CCCCEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---------------------KATTLFGK---Q-DEETLQV 133 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~---------------------~~~~~~~~---~-~~~~~~~ 133 (214)
++.++|+|.|+ ||+|+.+++.|+..|. ++.++|++.- +.+.+.+. + +...++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 45678999995 9999999999999999 7999998631 11111111 1 1223555
Q ss_pred EEecCCChhccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccc
Q 028043 134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 134 v~~Di~d~~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~ 207 (214)
+..|++. +.+.+ ++.+.|+||.+.. |...-..+.+++......+|+.++.+.+|
T Consensus 101 ~~~~~~~-~~~~~-~~~~~DlVid~~D------------------n~~~r~~ln~~~~~~~iP~i~~~~~g~~G 154 (339)
T PRK07688 101 IVQDVTA-EELEE-LVTGVDLIIDATD------------------NFETRFIVNDAAQKYGIPWIYGACVGSYG 154 (339)
T ss_pred EeccCCH-HHHHH-HHcCCCEEEEcCC------------------CHHHHHHHHHHHHHhCCCEEEEeeeeeee
Confidence 6667653 33443 4677898887742 11222345555644445677766655544
No 342
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.58 E-value=0.00031 Score=63.49 Aligned_cols=73 Identities=15% Similarity=0.265 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.... . ..+..+ +.. +.+.|+|||+
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~---~--~~~~~~---~~~--l~~~DiVIna 397 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQG---K--AFPLES---LPE--LHRIDIIINC 397 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---c--eechhH---hcc--cCCCCEEEEc
Confidence 346789999995 8999999999999999999999998888776543321 1 122222 221 3568999999
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
....
T Consensus 398 tP~g 401 (477)
T PRK09310 398 LPPS 401 (477)
T ss_pred CCCC
Confidence 8654
No 343
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.58 E-value=0.00043 Score=67.50 Aligned_cols=78 Identities=21% Similarity=0.130 Sum_probs=63.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCe-------------EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIK-------------SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~ 146 (214)
++|+|+|.|| |.||+..++.|++. +++ |.+.+++.++++++.+.. ++++.++.|++|.+++.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~--~~~~~v~lDv~D~e~L~~ 644 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI--ENAEAVQLDVSDSESLLK 644 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc--CCCceEEeecCCHHHHHH
Confidence 4789999995 99999999999875 333 888899988888776543 256789999999998886
Q ss_pred hhhCCCcEEEeccCCC
Q 028043 147 AIFEGVTHVICCTGTT 162 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~ 162 (214)
+ +.++|+||++....
T Consensus 645 ~-v~~~DaVIsalP~~ 659 (1042)
T PLN02819 645 Y-VSQVDVVISLLPAS 659 (1042)
T ss_pred h-hcCCCEEEECCCch
Confidence 3 57799999999763
No 344
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.57 E-value=0.00042 Score=60.64 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
...++|+|.|+ |.+|+..++.+...|++|++++|++++++.+...+.. .+..+..+.+.+.+. +.+.|+||+++
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~----~v~~~~~~~~~l~~~-l~~aDvVI~a~ 238 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG----RIHTRYSNAYEIEDA-VKRADLLIGAV 238 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc----eeEeccCCHHHHHHH-HccCCEEEEcc
Confidence 34577999986 8999999999999999999999999887765443321 133455666666653 57899999988
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
+.
T Consensus 239 ~~ 240 (370)
T TIGR00518 239 LI 240 (370)
T ss_pred cc
Confidence 65
No 345
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.56 E-value=0.00034 Score=59.00 Aligned_cols=79 Identities=16% Similarity=0.170 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
..+|+++|.| +||.|++++..|++.|. +|+++.|+.++.+++.+.+... ..... +...+++.. .....|+|||+
T Consensus 123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~-~~~~~--~~~~~~~~~-~~~~~DiVIna 197 (282)
T TIGR01809 123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV-GVITR--LEGDSGGLA-IEKAAEVLVST 197 (282)
T ss_pred cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc-Cccee--ccchhhhhh-cccCCCEEEEC
Confidence 4678999998 59999999999999997 6999999999988877654311 11111 111122222 24578999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.....
T Consensus 198 Tp~g~ 202 (282)
T TIGR01809 198 VPADV 202 (282)
T ss_pred CCCCC
Confidence 87653
No 346
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.54 E-value=0.00068 Score=54.33 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh-------------------hHHHHHhcccC----CCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP-------------------EKATTLFGKQD----EETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~----~~~~~~v~ 135 (214)
+.+++|+|.| .||+|+++++.|+..|. +++++|++. .+.+.+.+.+. ..+++.+.
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 4567899999 89999999999999998 799998862 12222222221 22334444
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++.+ +.+.+ .+.+.|+||.+..
T Consensus 98 ~~i~~-~~~~~-~~~~~D~Vi~~~d 120 (202)
T TIGR02356 98 ERVTA-ENLEL-LINNVDLVLDCTD 120 (202)
T ss_pred hcCCH-HHHHH-HHhCCCEEEECCC
Confidence 44533 34443 4678999987763
No 347
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.54 E-value=0.00047 Score=58.31 Aligned_cols=71 Identities=14% Similarity=0.096 Sum_probs=51.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+++++|.|. |+||+.+++.|...|++|++.+|++++.+...+ .+...+ + .+++.+ .+.+.|+||++
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~----~g~~~~--~---~~~l~~-~l~~aDiVint 216 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE----MGLIPF--P---LNKLEE-KVAEIDIVINT 216 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeee--c---HHHHHH-HhccCCEEEEC
Confidence 457899999996 889999999999999999999999876654331 112211 1 233343 35689999997
Q ss_pred cC
Q 028043 159 TG 160 (214)
Q Consensus 159 Ag 160 (214)
..
T Consensus 217 ~P 218 (287)
T TIGR02853 217 IP 218 (287)
T ss_pred CC
Confidence 64
No 348
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.54 E-value=0.00053 Score=58.59 Aligned_cols=112 Identities=20% Similarity=0.218 Sum_probs=68.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCC--CEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEE--TLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++|.|+|++|.+|+.++..|+..|. ++++++++ +++...-.+... ........ ..+++.+ .+.+.|++|..
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~~y~-~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEELKK-ALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCchHH-hcCCCCEEEEe
Confidence 4799999999999999999998884 79999987 222111111111 11111110 1112222 25689999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEcc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSS 202 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS 202 (214)
||....|. +.-.+.++.|..-...+.+.+++ . ...+|.+|-
T Consensus 76 aG~~~k~g---~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN 118 (310)
T cd01337 76 AGVPRKPG---MTRDDLFNINAGIVRDLATAVAKACPKALILIISN 118 (310)
T ss_pred CCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 99864322 22344567888888888887743 3 335555553
No 349
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=97.53 E-value=0.00049 Score=57.96 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh---hccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP---KDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~---~~v~~~~~~~~d~li 156 (214)
..|++++|+||+|.+|+-+.+...-+|++|+.++-.+++.+-+.+++.-. ...|..++ +.++++.=+++|+.+
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD----~~idyk~~d~~~~L~~a~P~GIDvyf 224 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD----AGIDYKAEDFAQALKEACPKGIDVYF 224 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc----eeeecCcccHHHHHHHHCCCCeEEEE
Confidence 35899999999999998877766668999999999999998877655411 12344333 223333234799999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh---ccCCCeEEEEccccccccCCCC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---PSSLKRIVLVSSVGVTKFNELP 212 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~---~~~~~~iV~vSS~~~~~~~~~p 212 (214)
-|.|-. +++++ .+...||+..+-++.|+..+.|
T Consensus 225 eNVGg~-----------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~ 260 (340)
T COG2130 225 ENVGGE-----------------------VLDAVLPLLNLFARIPVCGAISQYNAPELP 260 (340)
T ss_pred EcCCch-----------------------HHHHHHHhhccccceeeeeehhhcCCCCCC
Confidence 999842 22222 1233577777777777655433
No 350
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.52 E-value=0.0016 Score=55.02 Aligned_cols=76 Identities=18% Similarity=0.122 Sum_probs=54.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--h--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~--~~~d~li 156 (214)
.+++++|+|+++++|.++++.+...|++|+++++++++.+.+.. .. .. ...|..+.+..+... . +++|+++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~-~~---~~~~~~~~~~~~~~~~~~~~~~~d~~i 240 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LG-AD---YVIDYRKEDFVREVRELTGKRGVDVVV 240 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC-CC---eEEecCChHHHHHHHHHhCCCCCcEEE
Confidence 46799999999999999999999999999999999887665532 21 11 123554443332211 1 3689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 241 ~~~g~ 245 (342)
T cd08266 241 EHVGA 245 (342)
T ss_pred ECCcH
Confidence 99973
No 351
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.52 E-value=0.00039 Score=59.56 Aligned_cols=77 Identities=22% Similarity=0.155 Sum_probs=52.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc----cchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD----LDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~----v~~~~~~~~d~li 156 (214)
.|.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+. +.. ..|..+.++ +.+..-+++|+++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lG---a~~-vi~~~~~~~~~~~i~~~~~~gvd~v~ 226 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLG---FDD-AFNYKEEPDLDAALKRYFPNGIDIYF 226 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC---Cce-eEEcCCcccHHHHHHHhCCCCcEEEE
Confidence 57899999999999999999888899999999999888776654232 111 122222112 2221113689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 227 d~~g~ 231 (338)
T cd08295 227 DNVGG 231 (338)
T ss_pred ECCCH
Confidence 88763
No 352
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.48 E-value=0.00024 Score=61.15 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=51.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhC-CCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFE-GVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~-~~d~li~ 157 (214)
+++|||+||+||+|...++.+...|+.++++..+.++.+. .+.+... ...|..+.+ .+++..-+ ++|+++.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~-~~~lGAd----~vi~y~~~~~~~~v~~~t~g~gvDvv~D 217 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLEL-LKELGAD----HVINYREEDFVEQVRELTGGKGVDVVLD 217 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHH-HHhcCCC----EEEcCCcccHHHHHHHHcCCCCceEEEE
Confidence 7899999999999999999999999888888777777663 3333211 122333332 22221122 5999998
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
..|.
T Consensus 218 ~vG~ 221 (326)
T COG0604 218 TVGG 221 (326)
T ss_pred CCCH
Confidence 8874
No 353
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.47 E-value=0.00053 Score=58.91 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=69.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcChhH--HHHHhcccCCCCEEEE-EecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEK--ATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~~ 152 (214)
++|.|+||+|.||..++..|+..|. ++++++++++. ++...-.+........ ...++. ++.+ .+.+.
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~-~~~~--~~~da 79 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD-DPNV--AFKDA 79 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec-CcHH--HhCCC
Confidence 5899999999999999999998876 79999985432 2221111111000000 011111 1112 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vS 201 (214)
|+||..||....+. ++-.+.+..|+.-...+.+.+++ . ...+|.+|
T Consensus 80 DivvitaG~~~k~g---~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 128 (322)
T cd01338 80 DWALLVGAKPRGPG---MERADLLKANGKIFTAQGKALNDVASRDVKVLVVG 128 (322)
T ss_pred CEEEEeCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Confidence 99999999864322 23344568888888888888743 3 34556555
No 354
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.43 E-value=0.00046 Score=64.17 Aligned_cols=74 Identities=20% Similarity=0.255 Sum_probs=62.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
..+|+|.| .|.+|+.+++.|.++|+++++++.|+++.++..+ .+..++.+|.+|++.++++-.++.|.+|-+-+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK----YGYKVYYGDATQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence 35788888 7999999999999999999999999998887653 35678999999999998765668888886654
No 355
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.40 E-value=0.00072 Score=57.86 Aligned_cols=76 Identities=17% Similarity=0.140 Sum_probs=51.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh---hccchhhhCCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP---KDLDPAIFEGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~---~~v~~~~~~~~d~li~ 157 (214)
+.+|+|+||+|++|..+++.+...|+ +|+++++++++.+.+.+++. +.. ..|..+. +.+.+..-+++|+++.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG---a~~-vi~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG---FDA-AINYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC---CcE-EEECCCCCHHHHHHHHCCCCceEEEE
Confidence 37999999999999999988888999 79999999888776554332 111 1222221 1222211136899998
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
+.|.
T Consensus 231 ~~g~ 234 (345)
T cd08293 231 NVGG 234 (345)
T ss_pred CCCc
Confidence 8763
No 356
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.40 E-value=0.0012 Score=56.85 Aligned_cols=113 Identities=13% Similarity=0.100 Sum_probs=68.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcCh--hHHHHHhcccCCCCEEEEE-ecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCK-GDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~v~-~Di~d~~~v~~~~~~~~ 152 (214)
-+|.|+||+|.+|+.++..|+..|. +++++++++ +.++.....+......... ..++ .++.+ .+.+.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~~~~~--~~~da 80 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-TDPEE--AFKDV 80 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-cChHH--HhCCC
Confidence 4799999999999999999998874 799999864 2232221111111100000 0111 11112 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vS 201 (214)
|+||..||...-+ .++-.+.+..|..-...+.+.+++ . ...++.+|
T Consensus 81 DvVVitAG~~~k~---g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 81 DAALLVGAFPRKP---GMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred CEEEEeCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 9999999985422 223345668888888888888743 2 33455554
No 357
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.39 E-value=0.00053 Score=63.99 Aligned_cols=74 Identities=30% Similarity=0.326 Sum_probs=62.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++|+|.| .|.+|+.+++.|.++|.++++++.++++.+.+.+ .+..++.+|.+|++-++++-.++.|.+|.+-.
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK----FGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 36788888 7899999999999999999999999999887753 35678999999999888754567888886654
No 358
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.38 E-value=0.00079 Score=56.89 Aligned_cols=74 Identities=27% Similarity=0.356 Sum_probs=52.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~~v~~~~~~~~d~li~~A 159 (214)
.+.+++|+||+|++|.++++.+...|.+|+++++++++.+.+.+ +. .. .++ |..+ .+.+.+ ..++|++++++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~-~~-~~~--~~~~~~~~~~~--~~~~d~v~~~~ 234 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LG-AD-YVI--DGSKFSEDVKK--LGGADVVIELV 234 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cC-Cc-EEE--ecHHHHHHHHh--ccCCCEEEECC
Confidence 46799999999999999999999999999999998877666532 11 11 111 2221 122222 23799999998
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
|.
T Consensus 235 g~ 236 (332)
T cd08259 235 GS 236 (332)
T ss_pred Ch
Confidence 74
No 359
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.37 E-value=0.0011 Score=56.37 Aligned_cols=114 Identities=12% Similarity=0.156 Sum_probs=64.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+++|.|.|| |.+|..++..++..|. +|++.+++++.++.....+... ........++...+.+ .+.+.|++|..+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~--~~~~aDiVii~~ 78 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYE--DIAGSDVVVITA 78 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHH--HHCCCCEEEECC
Confidence 478999998 9999999999998875 9999999887654422111100 0000001111111122 246899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
|....+. ..-.+...-|..-...+++.+.+ .. ..+|++|
T Consensus 79 ~~p~~~~---~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 79 GVPRKPG---MSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred CCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9753211 11122334566666666665532 22 3355544
No 360
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.37 E-value=0.0018 Score=48.33 Aligned_cols=105 Identities=17% Similarity=0.193 Sum_probs=64.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHH-------------------HHHhc----ccCCCCEEEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TTLFG----KQDEETLQVCKGD 137 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~----~~~~~~~~~v~~D 137 (214)
.++|+|.| .|++|+++++.|+..|. +++++|.+.-.. +.+++ ..+..+++.+..+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 46899999 79999999999999999 588888752111 11111 1113345666677
Q ss_pred CCChhccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccc
Q 028043 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 138 i~d~~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~ 207 (214)
+. .+...+ .+++.|++|.+... ...-..+.+.++.....+|..+..+.++
T Consensus 81 ~~-~~~~~~-~~~~~d~vi~~~d~------------------~~~~~~l~~~~~~~~~p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 ID-EENIEE-LLKDYDIVIDCVDS------------------LAARLLLNEICREYGIPFIDAGVNGFYG 130 (135)
T ss_dssp CS-HHHHHH-HHHTSSEEEEESSS------------------HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred cc-cccccc-cccCCCEEEEecCC------------------HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence 73 344444 35789999987541 1223345556655556788777665443
No 361
>PRK05442 malate dehydrogenase; Provisional
Probab=97.37 E-value=0.00082 Score=57.83 Aligned_cols=114 Identities=13% Similarity=0.084 Sum_probs=68.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcChh--HHHHHhcccCCCCEEEE-EecCCChhccchhhhCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPE--KATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~ 151 (214)
.++|.|+||+|.+|+.++..|+..|. +++++|+++. +++.....+........ ...++. +..+ .+.+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~y~--~~~d 80 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD-DPNV--AFKD 80 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec-ChHH--HhCC
Confidence 36899999999999999999988664 7999998543 22221111110000000 001111 1112 2568
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS 201 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vS 201 (214)
.|+||..||...-+ .++-.+.+..|..-...+.+.+++ . ...+|.+|
T Consensus 81 aDiVVitaG~~~k~---g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 81 ADVALLVGARPRGP---GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred CCEEEEeCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 99999999975422 223345668888888888888744 2 34556555
No 362
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.36 E-value=0.00085 Score=59.77 Aligned_cols=73 Identities=29% Similarity=0.353 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |.+|+.+++.|...|+ +|++++|++++.+.+.+.+.. .. .+.+++.+ .+.+.|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~---~~-----~~~~~~~~-~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG---EA-----IPLDELPE-ALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---cE-----eeHHHHHH-HhccCCEEEEC
Confidence 56789999995 9999999999999997 799999999888776655431 11 12233333 24578888888
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.|..
T Consensus 250 T~s~ 253 (423)
T PRK00045 250 TGAP 253 (423)
T ss_pred CCCC
Confidence 7654
No 363
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.36 E-value=0.00065 Score=56.56 Aligned_cols=112 Identities=21% Similarity=0.172 Sum_probs=68.3
Q ss_pred EEEEcCchHHHHHHHHHHHHCC----CeEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 85 VLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
|.|.||+|.+|..++..|+..| .+|+++|+++++++.....+... ... ....++-.++..+ .+.+.|+||..+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~-~~~~aDiVv~t~ 78 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYE-AFKDADVVIITA 78 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHH-HhCCCCEEEECC
Confidence 5789998999999999999999 68999999887665443322210 000 0112221222333 357899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVS 201 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vS 201 (214)
|....+. +.-.....-|+.-...+.+.+++ ....++++|
T Consensus 79 ~~~~~~g---~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 79 GVGRKPG---MGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9765321 12223445677777777777643 223455554
No 364
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.34 E-value=0.0011 Score=56.90 Aligned_cols=115 Identities=11% Similarity=0.071 Sum_probs=65.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.++|.|.|| |.+|+.++..++..| .+|++++++++.++...-.+.. ....-....+....+.+ .+.+.|+||..
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~--~l~~ADiVVit 80 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE--DIKDSDVVVIT 80 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH--HhCCCCEEEEC
Confidence 3568999996 999999999999988 6899999987654321110110 00000001111111223 24689999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
+|....+.+ .-.+....|..-...+.+.+.+ .. ..+|++|
T Consensus 81 ag~~~~~g~---~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs 122 (319)
T PTZ00117 81 AGVQRKEEM---TREDLLTINGKIMKSVAESVKKYCPNAFVICVT 122 (319)
T ss_pred CCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 997543221 2233456666656666666533 22 2355554
No 365
>PRK04148 hypothetical protein; Provisional
Probab=97.34 E-value=0.00098 Score=49.87 Aligned_cols=69 Identities=13% Similarity=0.069 Sum_probs=53.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+++++++.|.+ -|.++++.|.+.|++|+++|.++...+...+ ..+.++.+|+.+++- .++++.|.++..
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~----~~~~~v~dDlf~p~~---~~y~~a~liysi 84 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK----LGLNAFVDDLFNPNL---EIYKNAKLIYSI 84 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH----hCCeEEECcCCCCCH---HHHhcCCEEEEe
Confidence 35789999944 8889999999999999999999998776543 346889999997652 235678887743
No 366
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.34 E-value=0.00048 Score=59.45 Aligned_cols=70 Identities=26% Similarity=0.283 Sum_probs=45.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCe---EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIK---SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+++|+|.||+|++|+++++.|.++|+. +..+.++.+..+.+. +.+ ......|+.+. .+.++|+||.+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~g--~~i~v~d~~~~------~~~~vDvVf~A 70 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--FKG--KELKVEDLTTF------DFSGVDIALFS 70 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eCC--ceeEEeeCCHH------HHcCCCEEEEC
Confidence 468999999999999999999998874 466776654333321 111 23344455432 12467777777
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
+|.
T Consensus 71 ~g~ 73 (334)
T PRK14874 71 AGG 73 (334)
T ss_pred CCh
Confidence 664
No 367
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.34 E-value=0.00078 Score=58.24 Aligned_cols=76 Identities=22% Similarity=0.159 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc----cchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD----LDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~----v~~~~~~~~d~li 156 (214)
.+.+|+|+||+|++|..+++.+...|++|+++++++++.+.+.+.+. +.. ..|..+.++ +.+..-+++|+++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG---a~~-vi~~~~~~~~~~~i~~~~~~gvD~v~ 233 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG---FDE-AFNYKEEPDLDAALKRYFPEGIDIYF 233 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC---CCE-EEECCCcccHHHHHHHHCCCCcEEEE
Confidence 47899999999999999998888899999999998888766542232 111 123322212 2221113689999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.|
T Consensus 234 d~vG 237 (348)
T PLN03154 234 DNVG 237 (348)
T ss_pred ECCC
Confidence 8876
No 368
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.34 E-value=0.0013 Score=55.83 Aligned_cols=71 Identities=14% Similarity=0.095 Sum_probs=51.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+++++|.|+ |++|+.+++.|...|++|++++|++++.+.... .+..++ + .+++.+ .+.+.|+||++
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~----~G~~~~--~---~~~l~~-~l~~aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE----MGLSPF--H---LSELAE-EVGKIDIIFNT 217 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCeee--c---HHHHHH-HhCCCCEEEEC
Confidence 346899999995 789999999999999999999999876554332 122222 2 233333 35679999997
Q ss_pred cC
Q 028043 159 TG 160 (214)
Q Consensus 159 Ag 160 (214)
+.
T Consensus 218 ~p 219 (296)
T PRK08306 218 IP 219 (296)
T ss_pred CC
Confidence 63
No 369
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.34 E-value=0.0013 Score=55.98 Aligned_cols=75 Identities=20% Similarity=0.173 Sum_probs=51.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch---hhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~---~~~-~~~d~li 156 (214)
.+.+|+|+||+|++|..+++.+...|++|+++++++++.+.+.+ +. +.. ..|..+.+.+.+ ... +++|+++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lG---a~~-vi~~~~~~~~~~~~~~~~~~gvdvv~ 212 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LG---FDV-AFNYKTVKSLEETLKKASPDGYDCYF 212 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC---CCE-EEeccccccHHHHHHHhCCCCeEEEE
Confidence 46899999999999999998888899999999999887766543 22 211 123322222221 112 2589999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.|
T Consensus 213 d~~G 216 (325)
T TIGR02825 213 DNVG 216 (325)
T ss_pred ECCC
Confidence 8876
No 370
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.33 E-value=0.0013 Score=55.99 Aligned_cols=113 Identities=20% Similarity=0.189 Sum_probs=69.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++|.|+|| |+||+.++..|+.++. ++++++++++.++-....+... -.......+....+.+ .+.+.|+++-.|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~--~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYE--DLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChh--hhcCCCEEEEeC
Confidence 47999999 9999999999987754 7999999855543322222111 0111112222211122 256899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVS 201 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vS 201 (214)
|...-|.+ .-.+.++.|..-...+.+++.. ...-++.+-
T Consensus 78 G~prKpGm---tR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVv 117 (313)
T COG0039 78 GVPRKPGM---TRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVV 117 (313)
T ss_pred CCCCCCCC---CHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence 98764432 2234668888888888887743 333444433
No 371
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.32 E-value=0.00071 Score=57.09 Aligned_cols=78 Identities=21% Similarity=0.294 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCC-CCE-EEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE-ETL-QVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~-~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+|+++|.| +||.|++++..|++.|. +|+++.|+.++.+++.+.+.. .+. .....| ..++.+ .....|+||
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~-~~~~~divI 199 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIED-VIAAADGVV 199 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHH-HHhhcCEEE
Confidence 4578999999 49999999999999997 699999999998887655421 111 111122 222222 234689999
Q ss_pred eccCCC
Q 028043 157 CCTGTT 162 (214)
Q Consensus 157 ~~Ag~~ 162 (214)
|+....
T Consensus 200 NaTp~G 205 (283)
T PRK14027 200 NATPMG 205 (283)
T ss_pred EcCCCC
Confidence 987654
No 372
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.30 E-value=0.0012 Score=55.87 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=51.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~~~d~li~ 157 (214)
.+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+ +. +.. ..|..+++ .+++..-+++|+++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~G---a~~-vi~~~~~~~~~~v~~~~~~gvd~vld 217 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LG---FDA-VFNYKTVSLEEALKEAAPDGIDCYFD 217 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC---CCE-EEeCCCccHHHHHHHHCCCCcEEEEE
Confidence 46899999999999999999988899999999999888776643 22 111 12333222 222211135888888
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+.|
T Consensus 218 ~~g 220 (329)
T cd08294 218 NVG 220 (329)
T ss_pred CCC
Confidence 765
No 373
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.30 E-value=0.0016 Score=55.17 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh---hHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP---EKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~---~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
..+|+++|.|| ||-+++++..|+..|. +|+++.|++ ++.+++.+.+... .......++.+.+.+.+ ...+.|+
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~-~~~~aDi 199 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE-ALASADI 199 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhh-hcccCCE
Confidence 46789999995 7779999999999997 799999984 4666665544211 11111122222222332 2457899
Q ss_pred EEeccCCC
Q 028043 155 VICCTGTT 162 (214)
Q Consensus 155 li~~Ag~~ 162 (214)
|||+-...
T Consensus 200 vINaTp~G 207 (288)
T PRK12749 200 LTNGTKVG 207 (288)
T ss_pred EEECCCCC
Confidence 99977554
No 374
>PLN02602 lactate dehydrogenase
Probab=97.29 E-value=0.0014 Score=56.92 Aligned_cols=108 Identities=18% Similarity=0.265 Sum_probs=68.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCC-----CEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEE-----TLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
++|.|+|+ |.||+.++..|+..|. ++++++.+++.++.....+... ... +.++ .| .+ .+.+.|+|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~d---y~--~~~daDiV 109 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TD---YA--VTAGSDLC 109 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CC---HH--HhCCCCEE
Confidence 69999996 9999999999998875 6999999876654432222110 111 1111 12 22 25689999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|-.||....+. ++-.+.+..|..-...+.+.+++ . ...+|.+|
T Consensus 110 VitAG~~~k~g---~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 110 IVTAGARQIPG---ESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred EECCCCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999864322 22234556777777777777643 2 23555555
No 375
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.29 E-value=0.0011 Score=56.58 Aligned_cols=73 Identities=25% Similarity=0.324 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |.||+.+++.|...| .+|++++|++++.+++.+++.. ..+ +.+++.+ ...+.|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~---~~~-----~~~~~~~-~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NAV-----PLDELLE-LLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC---eEE-----eHHHHHH-HHhcCCEEEEC
Confidence 46899999996 999999999999876 5799999999888777665432 222 2233443 24678999999
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.+..
T Consensus 246 t~~~ 249 (311)
T cd05213 246 TGAP 249 (311)
T ss_pred CCCC
Confidence 8854
No 376
>PLN00203 glutamyl-tRNA reductase
Probab=97.28 E-value=0.0014 Score=59.78 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |.+|+.+++.|...|+ +|+++.|+.++.+.+.+.+.+..+. ..++ +++.. .+.+.|+||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~--~~~~---~dl~~-al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII--YKPL---DEMLA-CAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE--eecH---hhHHH-HHhcCCEEEEc
Confidence 56899999997 9999999999999997 6999999999988877654322221 1222 23333 35678999988
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.+..
T Consensus 337 T~s~ 340 (519)
T PLN00203 337 TSSE 340 (519)
T ss_pred cCCC
Confidence 7644
No 377
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.25 E-value=0.0013 Score=56.24 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=67.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
++|.|+|+ |.||..++..|+..|. ++++++++++.++.....+.. ....+... .|. +. +.+.|+|
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy---~~--~~~adiv 75 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY---SV--TANSKVV 75 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH---HH--hCCCCEE
Confidence 58999996 9999999999988775 699999987655433222211 01122211 122 22 4679999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|..||....+. ++-.+.+..|..-...+.+.+++ . ...++.+|
T Consensus 76 vitaG~~~k~g---~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 76 IVTAGARQNEG---ESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred EECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 99999864322 22234567787777777777743 2 34455555
No 378
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.24 E-value=0.0012 Score=58.69 Aligned_cols=74 Identities=27% Similarity=0.342 Sum_probs=53.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.+++.+.+.. ..+ + .+++.+ .+.+.|+||.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~---~~i--~---~~~l~~-~l~~aDvVi~ 246 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG---EAV--K---FEDLEE-YLAEADIVIS 246 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---eEe--e---HHHHHH-HHhhCCEEEE
Confidence 356789999996 999999999999999 6899999999887766554421 112 1 123333 2456888888
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+.+..
T Consensus 247 aT~s~ 251 (417)
T TIGR01035 247 STGAP 251 (417)
T ss_pred CCCCC
Confidence 86643
No 379
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.24 E-value=0.0041 Score=50.74 Aligned_cols=78 Identities=22% Similarity=0.330 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh-------------------HHHHHhcccC----CCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQD----EETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~----~~~~~~v~ 135 (214)
+.+++|+|.| .||+|+++++.|+..|. +++++|.+.- +.+.+++.+. ..+++.+.
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 4567899999 89999999999999998 5777765421 1111111111 22455555
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++ .+.+.+ ++.++|+||.+..
T Consensus 98 ~~i~-~~~~~~-~~~~~DvVi~~~d 120 (228)
T cd00757 98 ERLD-AENAEE-LIAGYDLVLDCTD 120 (228)
T ss_pred ceeC-HHHHHH-HHhCCCEEEEcCC
Confidence 5553 344443 4678999998764
No 380
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.23 E-value=0.0015 Score=54.58 Aligned_cols=76 Identities=22% Similarity=0.177 Sum_probs=53.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++++|+|++|++|.++++.+.+.|.+|+++++++++.+.+.+ + + +. ...|..+.+..++. .. +++|.++
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~-g--~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 218 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-A-G--AD-AVFNYRAEDLADRILAATAGQGVDVII 218 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-C--CC-EEEeCCCcCHHHHHHHHcCCCceEEEE
Confidence 57899999999999999999999999999999998887766532 2 1 11 12344443322221 11 3699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 219 ~~~~~ 223 (325)
T cd08253 219 EVLAN 223 (325)
T ss_pred ECCch
Confidence 98764
No 381
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.23 E-value=0.002 Score=55.07 Aligned_cols=111 Identities=19% Similarity=0.182 Sum_probs=66.5
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|.|+||+|.||+.++..|+..|. +++++|+++...+. .+..... ...+.... +.+++.+ .+.+.|++|..||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a-~DL~~~~~~~~i~~~~--~~~~~~~-~~~daDivvitaG 76 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVA-ADLSHIPTAASVKGFS--GEEGLEN-ALKGADVVVIPAG 76 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEE-chhhcCCcCceEEEec--CCCchHH-HcCCCCEEEEeCC
Confidence 489999999999999999998875 79999987721111 1100011 11111101 1111222 3678999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
....+. ++-.+....|+.-...+.+.+.+ .. ..+|.+|
T Consensus 77 ~~~~~g---~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs 116 (312)
T TIGR01772 77 VPRKPG---MTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT 116 (312)
T ss_pred CCCCCC---ccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 864332 22334567788888888877743 33 3455554
No 382
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.22 E-value=0.0015 Score=58.26 Aligned_cols=113 Identities=13% Similarity=0.089 Sum_probs=72.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-------CC--eEEEEEcChhHHHHHhcccCCCCEEE-EEecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-------NI--KSRLLLRDPEKATTLFGKQDEETLQV-CKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~~~~-v~~Di~d~~~v~~~~~~~~ 152 (214)
-+|.|+|++|.||.+++..|+.. |. ++++++++++.++...-++....... ....++. ++.+ .+.+.
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~-~~ye--~~kda 177 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI-DPYE--VFQDA 177 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec-CCHH--HhCcC
Confidence 48999999999999999999988 65 79999999887655433222111000 0011111 1122 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CC-CeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SL-KRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~-~~iV~vS 201 (214)
|++|..||....+. ++-.+.++.|+.-...+.+.+.+ +. ..||.+|
T Consensus 178 DiVVitAG~prkpG---~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 178 EWALLIGAKPRGPG---MERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred CEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 99999999854322 23344668888888888888744 33 4555555
No 383
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=97.19 E-value=0.0078 Score=49.41 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=47.6
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHH-------------------Hhcc----cCCCCEEEEEecCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATT-------------------LFGK----QDEETLQVCKGDTR 139 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~-------------------~~~~----~~~~~~~~v~~Di~ 139 (214)
+|+|.| .||+|.++++.|+..|. ++.++|.+.-.... +.+. .+..+++.+..++.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 478888 79999999999999998 58888875211111 1111 11234555666775
Q ss_pred ChhccchhhhCCCcEEEecc
Q 028043 140 NPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 140 d~~~v~~~~~~~~d~li~~A 159 (214)
+.+......+.+.|+||.+.
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~ 99 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNAL 99 (234)
T ss_pred hhhhchHHHHhCCCEEEECC
Confidence 54433333467888888764
No 384
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.16 E-value=0.002 Score=54.40 Aligned_cols=43 Identities=19% Similarity=0.216 Sum_probs=37.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
++.||+|+|.|++|-+|+.++..|+++|++|+++.|+...+.+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~ 198 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPE 198 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHH
Confidence 4679999999999999999999999999999999886555444
No 385
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.14 E-value=0.0013 Score=59.26 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh
Q 028043 79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142 (214)
Q Consensus 79 ~~~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~ 142 (214)
++.||+||||+| ||-.|.+||+++..+|++|+++.-... ++ ...+++++. +...+
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~------~p~~v~~i~--V~ta~ 323 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA------DPQGVKVIH--VESAR 323 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC------CCCCceEEE--ecCHH
Confidence 478999999975 589999999999999999999874321 11 133455544 34444
Q ss_pred ccchhhhC--CCcEEEeccCCCCC
Q 028043 143 DLDPAIFE--GVTHVICCTGTTAF 164 (214)
Q Consensus 143 ~v~~~~~~--~~d~li~~Ag~~~~ 164 (214)
++.+++.. +.|++|++|++..+
T Consensus 324 eM~~av~~~~~~Di~I~aAAVaDy 347 (475)
T PRK13982 324 QMLAAVEAALPADIAIFAAAVADW 347 (475)
T ss_pred HHHHHHHhhCCCCEEEEeccccce
Confidence 44443322 47999999999875
No 386
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.14 E-value=0.0011 Score=53.62 Aligned_cols=41 Identities=29% Similarity=0.266 Sum_probs=36.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
|+|.|.||+|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~ 41 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAA 41 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHH
Confidence 46999999999999999999999999999999988776654
No 387
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.14 E-value=0.0013 Score=51.50 Aligned_cols=42 Identities=21% Similarity=0.242 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT 120 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~ 120 (214)
..+.+|+|.|.| .|.||+++++.|...|.+|++.+|.....+
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh
Confidence 567899999999 799999999999999999999999887554
No 388
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.12 E-value=0.0028 Score=54.63 Aligned_cols=73 Identities=19% Similarity=0.202 Sum_probs=53.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.|++|+|+|++ |+|...++.....|++|++++|++++.+...+.- ... ..|-+|++.+++ +.+..|++|..++
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lG----Ad~-~i~~~~~~~~~~-~~~~~d~ii~tv~ 238 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLG----ADH-VINSSDSDALEA-VKEIADAIIDTVG 238 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhC----CcE-EEEcCCchhhHH-hHhhCcEEEECCC
Confidence 57899999977 9999988888889999999999999887654321 111 223335555554 2334899999888
No 389
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.09 E-value=0.0021 Score=55.76 Aligned_cols=78 Identities=27% Similarity=0.273 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---hCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~~~~d~li 156 (214)
..++.|||.||+||+|.+.++.....|..+++++++.+..+-.+ .+.. -...|..+++-++... .+++|+|+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGA----d~vvdy~~~~~~e~~kk~~~~~~DvVl 230 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGA----DEVVDYKDENVVELIKKYTGKGVDVVL 230 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCC----cEeecCCCHHHHHHHHhhcCCCccEEE
Confidence 46789999999999999999998889955555666665554433 2221 1346777755554321 23699999
Q ss_pred eccCCC
Q 028043 157 CCTGTT 162 (214)
Q Consensus 157 ~~Ag~~ 162 (214)
.|.|-.
T Consensus 231 D~vg~~ 236 (347)
T KOG1198|consen 231 DCVGGS 236 (347)
T ss_pred ECCCCC
Confidence 999973
No 390
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.09 E-value=0.0044 Score=52.92 Aligned_cols=107 Identities=16% Similarity=0.160 Sum_probs=66.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
|+|.|.|+ |.+|..++..|+.+| .+|+++++++++.+.....+.. ...... . .|. + .+.+.|++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~---~--~l~~aDiV 71 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDY---A--DCKGADVV 71 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCH---H--HhCCCCEE
Confidence 46999997 999999999999999 5899999998766531111110 111111 1 222 2 25689999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|.++|....+. ++..+....|..-...+++.+++ . .+.++.++
T Consensus 72 iita~~~~~~~---~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 72 VITAGANQKPG---ETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred EEccCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999754221 12233456677777777776633 2 23455443
No 391
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.09 E-value=0.0021 Score=54.61 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=67.4
Q ss_pred EEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCE--EEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETL--QVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~--~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|.|.|+ |++|..++..|+..| .+++++++++++++.....+..... .......++ +.+ .+.+.|++|..||
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~--~~~--~l~~aDiVIitag 75 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGG--DYA--DAADADIVVITAG 75 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECC--CHH--HhCCCCEEEEcCC
Confidence 467885 789999999999988 6899999988776554433321100 001111111 122 2568999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
....+. ++-.+....|+.-...+.+.+++ . ...++.+|
T Consensus 76 ~p~~~~---~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 76 APRKPG---ETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred CCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 754222 22344556788878888887743 2 34555555
No 392
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.08 E-value=0.0088 Score=49.41 Aligned_cols=36 Identities=28% Similarity=0.299 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
.++.++|+|.|+ ||+|+.+++.|+..|. +++++|.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 456789999996 9999999999999997 58888765
No 393
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.07 E-value=0.0045 Score=54.32 Aligned_cols=78 Identities=14% Similarity=0.255 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC-------------------hhHHHHHhcccC----CCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD-------------------PEKATTLFGKQD----EETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~----~~~~~~v~ 135 (214)
+++++|+|.| .||+|+++++.|+..|. ++++++++ ..+.+.+.+.+. ...++.+.
T Consensus 133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4677899997 58999999999999998 68888887 223333222221 22333444
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
..+.+ +.+.+ ++.+.|+||++..
T Consensus 212 ~~~~~-~~~~~-~~~~~D~Vv~~~d 234 (376)
T PRK08762 212 ERVTS-DNVEA-LLQDVDVVVDGAD 234 (376)
T ss_pred ccCCh-HHHHH-HHhCCCEEEECCC
Confidence 44432 33443 4578999998774
No 394
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.07 E-value=0.002 Score=57.64 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=67.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC---CC----eEEEEEc--ChhHHHHHhcccCC------CCEEEEEecCCChhccchh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR---NI----KSRLLLR--DPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPA 147 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~---G~----~V~~~~r--~~~~~~~~~~~~~~------~~~~~v~~Di~d~~~v~~~ 147 (214)
-+|+||||+|.||+++.-.+++- |. .+++++. +.+.++...-++.. .++.+. . +. ..
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~-----~~-~e- 195 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T-----DL-DV- 195 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E-----CC-HH-
Confidence 57999999999999999999872 53 3666777 45554432222211 112221 1 11 22
Q ss_pred hhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC--CeEEEEcc
Q 028043 148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL--KRIVLVSS 202 (214)
Q Consensus 148 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~--~~iV~vSS 202 (214)
.+.+.|++|..||....+. ++-.+..+.|..-...+.+++.+ .. .+|+.+.|
T Consensus 196 a~~daDvvIitag~prk~G---~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 196 AFKDAHVIVLLDDFLIKEG---EDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred HhCCCCEEEECCCCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 3678999999999754322 23344567888888888887733 32 45666654
No 395
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.06 E-value=0.0034 Score=53.91 Aligned_cols=112 Identities=15% Similarity=0.199 Sum_probs=66.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHH--H--hcc--cCCCCEEEEEecCCChhccchhhhCCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATT--L--FGK--QDEETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~--~--~~~--~~~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
+.++|.|.| +|.+|..++..++..|. +|++++++++.++. + ... ..+....+.. .+|. + .+.+.|
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~---~--~l~~aD 76 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY---E--DIAGSD 76 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH---H--HhCCCC
Confidence 457899999 59999999999999995 89999998875421 1 111 0011122221 1222 2 246899
Q ss_pred EEEeccCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 154 HVICCTGTTAFPSRRWD---GDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~---~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
+||..||....+.. ++ +-.+....|+.-...+++.+.+ .. ..++++|
T Consensus 77 iVI~tag~~~~~~~-~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s 128 (321)
T PTZ00082 77 VVIVTAGLTKRPGK-SDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT 128 (321)
T ss_pred EEEECCCCCCCCCC-CcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999998653222 11 1133445566666666666533 22 2455555
No 396
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.05 E-value=0.0045 Score=50.01 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~ 115 (214)
.+..++|+|.| .||+|+.+++.|+..|.. ++++|.+
T Consensus 25 ~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35678899999 699999999999999985 8888887
No 397
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=97.04 E-value=0.0021 Score=56.53 Aligned_cols=113 Identities=13% Similarity=0.113 Sum_probs=68.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-e----EEE----EEcChhHHHHHhcccCCCCEEEE-EecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-K----SRL----LLRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~----V~~----~~r~~~~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~~ 152 (214)
-+|.|+||+|.+|.+++..|+..|. . |.+ ++++.+.++...-++...-.... ..-++. ++.+ .+.+.
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~~y~--~~kda 121 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-DPYE--VFEDA 121 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-CCHH--HhCCC
Confidence 4899999999999999999998764 2 344 37777766543322221100000 011111 1122 25789
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vS 201 (214)
|++|..||....+. ++-.+.+..|+.-...+.+.+.+ . ..++|.+|
T Consensus 122 DIVVitAG~prkpg---~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 122 DWALLIGAKPRGPG---MERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred CEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 99999999854322 23344567888888888888744 2 34555555
No 398
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.03 E-value=0.0031 Score=52.50 Aligned_cols=76 Identities=18% Similarity=0.187 Sum_probs=52.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhh-hCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAI-FEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~-~~~~d~li 156 (214)
.+++++|+|++|++|..+++.+...|++|+++++++++.+.+.+ .. +. ...|..+.+. +.+.. -+++|.++
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LG---AD-VAINYRTEDFAEEVKEATGGRGVDVIL 213 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cC---CC-EEEeCCchhHHHHHHHHhCCCCeEEEE
Confidence 46899999999999999999999999999999998877766532 21 11 1233333222 22111 13689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 214 ~~~g~ 218 (323)
T cd05276 214 DMVGG 218 (323)
T ss_pred ECCch
Confidence 98874
No 399
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.02 E-value=0.0022 Score=57.42 Aligned_cols=41 Identities=24% Similarity=0.450 Sum_probs=36.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
|+|.|.||+|.+|..+++.|.+.|++|++.+|+++...+..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a 41 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA 41 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence 47999999999999999999999999999999987755443
No 400
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.01 E-value=0.017 Score=43.34 Aligned_cols=31 Identities=32% Similarity=0.459 Sum_probs=27.1
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+|+|.|+ |++|.++++.|+..|. ++.++|.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4789995 9999999999999998 58888765
No 401
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=97.01 E-value=0.0012 Score=53.71 Aligned_cols=112 Identities=17% Similarity=0.148 Sum_probs=82.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
...++.|+.++.|+++++.....|+.|.++.|+..+ ...+.. ...+.++.+|.....-.+. ...++..++-++|-.
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~sw-~~~vswh~gnsfssn~~k~-~l~g~t~v~e~~ggf 128 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSSW-PTYVSWHRGNSFSSNPNKL-KLSGPTFVYEMMGGF 128 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhCC-CcccchhhccccccCcchh-hhcCCcccHHHhcCc
Confidence 468999999999999999999999999999998652 111111 3456778888776554443 345677888888755
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGV 205 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~ 205 (214)
. +...+..+|-....+..+++ +.++++++|||....
T Consensus 129 g-------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~ 165 (283)
T KOG4288|consen 129 G-------NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF 165 (283)
T ss_pred c-------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc
Confidence 3 33445677777777777766 679999999998654
No 402
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.98 E-value=0.0031 Score=54.63 Aligned_cols=74 Identities=16% Similarity=0.095 Sum_probs=44.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEE-EecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+++|.|.||+|.+|+++++.|.+. +++++.+.++.+..+.+.+... .+... ..++.+.+.. ...++|+++.+.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~--~~~~~~~~~~~~~~~~---~~~~vD~Vf~al 76 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHP--HLRGLVDLVLEPLDPE---ILAGADVVFLAL 76 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCc--ccccccCceeecCCHH---HhcCCCEEEECC
Confidence 478999999999999999999986 6787776664333222221111 11111 1223333221 235799999877
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
.
T Consensus 77 P 77 (343)
T PRK00436 77 P 77 (343)
T ss_pred C
Confidence 5
No 403
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.97 E-value=0.013 Score=49.11 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+.+.+|+|.| .||+|+++++.|+..|. ++++++.+
T Consensus 28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4667899998 78999999999999994 78888865
No 404
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=96.96 E-value=0.0039 Score=52.76 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=51.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~~~d~li~ 157 (214)
.+.+++|.|++|.+|..+++.+.+.|++|+.+++++++.+.+.+.+. .. .+ .|..+.+ .+.+..-+++|++++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g-~~-~~--~~~~~~~~~~~v~~~~~~~~d~vi~ 220 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELG-FD-AA--INYKTPDLAEALKEAAPDGIDVYFD 220 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcC-Cc-eE--EecCChhHHHHHHHhccCCceEEEE
Confidence 46899999999999999999999999999999998887766543222 11 11 2222222 122211136899998
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+.|
T Consensus 221 ~~g 223 (329)
T cd05288 221 NVG 223 (329)
T ss_pred cch
Confidence 866
No 405
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.96 E-value=0.0097 Score=51.85 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh-------------------HHHHHhccc----CCCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQ----DEETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~----~~~~~~~v~ 135 (214)
+++++|+|.| .||+|+++++.|+..|. +++++|.+.- +.+.+++.+ +..+++.+.
T Consensus 26 L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 4567999999 59999999999999998 5888887631 112222211 123445555
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++. +...+ ++.+.|+||.+..
T Consensus 105 ~~i~~-~~~~~-~~~~~DvVvd~~d 127 (355)
T PRK05597 105 RRLTW-SNALD-ELRDADVILDGSD 127 (355)
T ss_pred eecCH-HHHHH-HHhCCCEEEECCC
Confidence 56653 33333 3678999997763
No 406
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=96.96 E-value=0.0056 Score=52.24 Aligned_cols=114 Identities=17% Similarity=0.119 Sum_probs=65.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHH-hcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTL-FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~-~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++|.|.|+ |.+|..++..++..|. +|++++++++..+.. .+.............++-..+.++ +.+.|++|-.||
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~--~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD--TANSDIVVITAG 78 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH--hCCCCEEEEcCC
Confidence 57999996 9999999999999886 899999976543311 111110000000011111111222 357899999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEcc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSS 202 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS 202 (214)
....+. +.-.+.+..|..-...+++.+.+ . ...||.+|-
T Consensus 79 ~p~~~~---~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 79 LPRKPG---MSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 753211 12223456788888888777633 2 234555553
No 407
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.95 E-value=0.0074 Score=47.00 Aligned_cols=46 Identities=26% Similarity=0.237 Sum_probs=38.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.++.+|+|+|.|+++-+|..+++.|.++|++|.++.|+.+.+.+..
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~l 85 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEHT 85 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHHH
Confidence 3568999999998767899999999999999999999876665543
No 408
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.95 E-value=0.012 Score=48.41 Aligned_cols=36 Identities=28% Similarity=0.353 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP 116 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~ 116 (214)
+++.+|+|.| .||+|+.+++.|+..|. +++++|.+.
T Consensus 22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 4567899998 78999999999999997 588887763
No 409
>PRK10537 voltage-gated potassium channel; Provisional
Probab=96.92 E-value=0.0052 Score=54.23 Aligned_cols=71 Identities=10% Similarity=0.106 Sum_probs=55.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
..+++|.| .|.+|+.++++|.++|.++++++.+.. ++.. ..+..++.+|.+|++.++++-.++.+.+|-..
T Consensus 240 k~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~----~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t 310 (393)
T PRK10537 240 KDHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL--EHRL----PDDADLIPGDSSDSAVLKKAGAARARAILALR 310 (393)
T ss_pred CCeEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh--hhhc----cCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence 45799999 578999999999999999988886532 2211 24567899999999999886567888888654
No 410
>PRK06849 hypothetical protein; Provisional
Probab=96.89 E-value=0.004 Score=54.68 Aligned_cols=39 Identities=13% Similarity=0.008 Sum_probs=35.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
+.|+|||||++..+|..+++.|.+.|++|++++.++...
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~ 41 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL 41 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence 458999999999999999999999999999999886543
No 411
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.89 E-value=0.016 Score=49.61 Aligned_cols=74 Identities=16% Similarity=0.232 Sum_probs=46.4
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHH-------------------Hhccc----CCCCEEEEEecCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATT-------------------LFGKQ----DEETLQVCKGDTR 139 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~-------------------~~~~~----~~~~~~~v~~Di~ 139 (214)
+|+|.| .||+|.++++.|+..|. ++.++|.+.-.... +++.+ ....++.+..++.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 488999 59999999999999998 48888765322111 11111 1234555666676
Q ss_pred ChhccchhhhCCCcEEEecc
Q 028043 140 NPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 140 d~~~v~~~~~~~~d~li~~A 159 (214)
+.+...+ .+.+.|+||.+.
T Consensus 80 ~~~~~~~-f~~~~DvVv~a~ 98 (312)
T cd01489 80 DPDFNVE-FFKQFDLVFNAL 98 (312)
T ss_pred CccchHH-HHhcCCEEEECC
Confidence 5322222 467788888765
No 412
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.87 E-value=0.0056 Score=55.23 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |++|.++++.|.++|++|+++++++. ......+.+...++.+..++-.. ....+|.||..
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------~~~~~D~Vv~s 85 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------LPEDTDLVVTS 85 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------ccCCCCEEEEC
Confidence 46789999995 88999999999999999999986543 22222222323455555443221 12458999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.|+..
T Consensus 86 ~Gi~~ 90 (480)
T PRK01438 86 PGWRP 90 (480)
T ss_pred CCcCC
Confidence 98753
No 413
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.87 E-value=0.0037 Score=50.13 Aligned_cols=38 Identities=24% Similarity=0.268 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.++++|+|+|.|| |.+|...++.|++.|++|+++++..
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3568999999995 9999999999999999999998754
No 414
>PLN02928 oxidoreductase family protein
Probab=96.85 E-value=0.0042 Score=53.94 Aligned_cols=83 Identities=14% Similarity=0.065 Sum_probs=50.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.||++.|.| .|.||+++++.|...|.+|++.+|+..........+....+..........+++++ ++.+.|+|+.
T Consensus 155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~e-ll~~aDiVvl 232 (347)
T PLN02928 155 DTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYE-FAGEADIVVL 232 (347)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHH-HHhhCCEEEE
Confidence 457899999999 69999999999999999999999864321110000000000000001112334554 4567888888
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+....
T Consensus 233 ~lPlt 237 (347)
T PLN02928 233 CCTLT 237 (347)
T ss_pred CCCCC
Confidence 77644
No 415
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.84 E-value=0.0074 Score=46.61 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=33.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
..+.||+++|.| =|.+|+.+|+.|...|++|+++..+|-++-+
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq 61 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQ 61 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence 456899999999 8999999999999999999999999976533
No 416
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.83 E-value=0.0048 Score=54.91 Aligned_cols=42 Identities=29% Similarity=0.264 Sum_probs=36.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
.+.|++|+|.|. |.||+.+++.|...|++|+++++++.+..+
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~ 250 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ 250 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence 357899999994 899999999999999999999999876544
No 417
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=96.83 E-value=0.0032 Score=51.33 Aligned_cols=75 Identities=21% Similarity=0.116 Sum_probs=51.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh---hhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA---IFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~---~~~~~d~li~ 157 (214)
.+++++|+|+++ +|+.+++.+...|.+|+++++++++.+.+.+ .. .. ...|..+.+..+.. ..+++|++++
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g---~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 207 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-LG---AD-HVIDYKEEDLEEELRLTGGGGADVVID 207 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hC---Cc-eeccCCcCCHHHHHHHhcCCCCCEEEE
Confidence 567999999998 9999999999999999999998877665432 21 11 11233332222210 1246999999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
++|.
T Consensus 208 ~~~~ 211 (271)
T cd05188 208 AVGG 211 (271)
T ss_pred CCCC
Confidence 9874
No 418
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.83 E-value=0.023 Score=45.38 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~ 115 (214)
+++.+|+|.|+ ||+|.++++.|+..|.. ++++|.+
T Consensus 17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 34578999985 55999999999999985 8888765
No 419
>PRK08328 hypothetical protein; Provisional
Probab=96.81 E-value=0.02 Score=46.86 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP 116 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~ 116 (214)
+++++|+|.| .||+|+++++.|+..|. +++++|.+.
T Consensus 25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 4567899999 78999999999999998 588887653
No 420
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.80 E-value=0.0027 Score=52.95 Aligned_cols=105 Identities=18% Similarity=0.152 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe---EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK---SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+-+|.|.||+||||+-+...|. .... +.+.|..... -....+...+-.......+-++.++++ +.+.|+||
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~--GVaaDlSHI~T~s~V~g~~g~~~L~~a-l~~advVv 101 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTP--GVAADLSHINTNSSVVGFTGADGLENA-LKGADVVV 101 (345)
T ss_pred cCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCC--cccccccccCCCCceeccCChhHHHHH-hcCCCEEE
Confidence 356789999999999999987664 4443 3344433211 111111111111122344445567764 78999999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
--||+..-|.+.- ++.+++|.--...+..++.
T Consensus 102 IPAGVPRKPGMTR---DDLFn~NAgIv~~l~~aia 133 (345)
T KOG1494|consen 102 IPAGVPRKPGMTR---DDLFNINAGIVKTLAAAIA 133 (345)
T ss_pred ecCCCCCCCCCcH---HHhhhcchHHHHHHHHHHH
Confidence 9999977554432 3467888887888887763
No 421
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.79 E-value=0.0063 Score=51.39 Aligned_cols=74 Identities=20% Similarity=0.182 Sum_probs=50.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~~~d~li~~A 159 (214)
+.+++|.|++|++|..+++.+...|.+|+++++++++.+.+.+ +. +.. ..|..+ .+.+.+..-+++|+++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g---~~~-v~~~~~~~~~~~~~~~~~~~d~vld~~ 221 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LG---AKE-VIPREELQEESIKPLEKQRWAGAVDPV 221 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cC---CCE-EEcchhHHHHHHHhhccCCcCEEEECC
Confidence 5799999999999999999999999999999999888776542 22 111 122222 2223221113589999876
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
|
T Consensus 222 g 222 (326)
T cd08289 222 G 222 (326)
T ss_pred c
Confidence 5
No 422
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.78 E-value=0.0089 Score=51.57 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=48.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc---ChhHHHHHhcccCCCCEEEEEecCCChhccch-hhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR---DPEKATTLFGKQDEETLQVCKGDTRNPKDLDP-AIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~-~~~~~~d~li 156 (214)
.+++|+|+|+ |+||...++.+...|++|++++| ++++.+.+. ++ ++.. .|..+. ++.+ ...+++|++|
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~---Ga~~--v~~~~~-~~~~~~~~~~~d~vi 243 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-EL---GATY--VNSSKT-PVAEVKLVGEFDLII 243 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-Hc---CCEE--ecCCcc-chhhhhhcCCCCEEE
Confidence 5689999985 99999999888889999999998 455555333 22 2232 233322 1111 1124689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.++|.
T Consensus 244 d~~g~ 248 (355)
T cd08230 244 EATGV 248 (355)
T ss_pred ECcCC
Confidence 99984
No 423
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.78 E-value=0.012 Score=50.47 Aligned_cols=70 Identities=17% Similarity=0.149 Sum_probs=49.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.+|+|.|.| .|.||+.+++.|...|++|++.+|.....+ ++... ...+++++ ++.+.|+|+.
T Consensus 132 ~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~---------~~~~~----~~~~~l~e-~l~~aDvvv~ 196 (312)
T PRK15469 132 YHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP---------GVQSF----AGREELSA-FLSQTRVLIN 196 (312)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC---------Cceee----cccccHHH-HHhcCCEEEE
Confidence 456889999999 899999999999999999999988653211 11111 12334554 4677898887
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+....
T Consensus 197 ~lPlt 201 (312)
T PRK15469 197 LLPNT 201 (312)
T ss_pred CCCCC
Confidence 77543
No 424
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=96.78 E-value=0.0089 Score=51.36 Aligned_cols=74 Identities=20% Similarity=0.147 Sum_probs=50.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~ 157 (214)
.+++|+|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +. +.. ..|..+. ++.+.. .+++|++|.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lG---a~~-vi~~~~~-~~~~~~~~~g~~D~vid 241 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MG---ADK-LVNPQND-DLDHYKAEKGYFDVSFE 241 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cC---CcE-EecCCcc-cHHHHhccCCCCCEEEE
Confidence 4789999996 9999999998888998 58889999988775543 32 211 1233332 222211 235899999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
++|.
T Consensus 242 ~~G~ 245 (343)
T PRK09880 242 VSGH 245 (343)
T ss_pred CCCC
Confidence 9884
No 425
>PRK08223 hypothetical protein; Validated
Probab=96.76 E-value=0.019 Score=48.46 Aligned_cols=36 Identities=31% Similarity=0.347 Sum_probs=30.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
.+++.+|+|.| .||+|+.+++.|+..|. ++.++|.+
T Consensus 24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34567899999 78999999999999998 58888775
No 426
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.76 E-value=0.028 Score=48.03 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=64.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------C-CCEEEEEecCCChhccchhhhCCCcE
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------E-ETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~-~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
+|.|.|+ |.||..+|..|+.+|. ++++++.+++.++.....+. . ..+.+.. .|.+ .+.+.|+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~-----~~~~aDi 71 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYD-----DCADADI 71 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHH-----HhCCCCE
Confidence 4789997 9999999999998876 69999998765543222111 1 1233322 2222 2567999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
||..||....|.+. .+-.+.+..|..-...+.+.+.
T Consensus 72 vvitaG~~~kpg~t-r~R~dll~~N~~I~~~i~~~i~ 107 (307)
T cd05290 72 IVITAGPSIDPGNT-DDRLDLAQTNAKIIREIMGNIT 107 (307)
T ss_pred EEECCCCCCCCCCC-chHHHHHHHHHHHHHHHHHHHH
Confidence 99999986533211 0014456888888888888774
No 427
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=96.75 E-value=0.0069 Score=50.59 Aligned_cols=76 Identities=16% Similarity=0.204 Sum_probs=51.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~~-~~~d~li 156 (214)
.+++++|+|++|++|..+++.+...|++|+++.+++++.+.+ .... +.. ..+..+.+. +.+..- +++|.++
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g---~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i 213 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALG---ADI-AINYREEDFVEVVKAETGGKGVDVIL 213 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC---CcE-EEecCchhHHHHHHHHcCCCCeEEEE
Confidence 468999999999999999999999999999999988776644 2221 111 122222221 222111 2589999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 214 ~~~~~ 218 (325)
T TIGR02824 214 DIVGG 218 (325)
T ss_pred ECCch
Confidence 98763
No 428
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.74 E-value=0.0074 Score=53.55 Aligned_cols=44 Identities=27% Similarity=0.267 Sum_probs=38.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+.|++|+|.| .|.||+.+++.+...|++|+++++++.+++...
T Consensus 199 ~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~ 242 (413)
T cd00401 199 MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAA 242 (413)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence 35789999999 678999999999999999999999988766543
No 429
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.73 E-value=0.031 Score=45.81 Aligned_cols=35 Identities=31% Similarity=0.397 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+++++|+|.| .||+|+++++.|+..|. +++++|.+
T Consensus 9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3567899999 79999999999999998 68888765
No 430
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.72 E-value=0.007 Score=50.79 Aligned_cols=67 Identities=21% Similarity=0.240 Sum_probs=49.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+++++|.| +||.+++++..|++.|. +|.++.|++++.+++.+.+. .+.. +.+. ....|+|||+-.
T Consensus 122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~--------~~~~--~~~~---~~~~dlvINaTp 187 (272)
T PRK12550 122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG--------YEWR--PDLG---GIEADILVNVTP 187 (272)
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC--------Ccch--hhcc---cccCCEEEECCc
Confidence 46899999 59999999999999998 59999999998888765431 1111 1111 135799999875
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 188 ~G 189 (272)
T PRK12550 188 IG 189 (272)
T ss_pred cc
Confidence 44
No 431
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.69 E-value=0.012 Score=53.69 Aligned_cols=79 Identities=18% Similarity=0.122 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh------------cc---
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK------------DL--- 144 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~------------~v--- 144 (214)
..+.+|+|+| .|.+|...+..+...|++|+++++++++++...+ + +.+++..|..+.+ +.
T Consensus 163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~~v~i~~~e~~~~~~gya~~~s~~~~~~ 237 (509)
T PRK09424 163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAEFLELDFEEEGGSGDGYAKVMSEEFIKA 237 (509)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEEEeccccccccccchhhhcchhHHHH
Confidence 3578999999 7999999999999999999999999998876553 2 3343434433211 10
Q ss_pred -chhh---hCCCcEEEeccCCCC
Q 028043 145 -DPAI---FEGVTHVICCTGTTA 163 (214)
Q Consensus 145 -~~~~---~~~~d~li~~Ag~~~ 163 (214)
.+.+ .+++|++|.++|...
T Consensus 238 ~~~~~~~~~~gaDVVIetag~pg 260 (509)
T PRK09424 238 EMALFAEQAKEVDIIITTALIPG 260 (509)
T ss_pred HHHHHHhccCCCCEEEECCCCCc
Confidence 0111 246999999999743
No 432
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.69 E-value=0.011 Score=49.37 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=38.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+++++|+|++|++|..+++.+...|++|+.++++.++.+.+.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 186 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL 186 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 4679999999999999999999999999999999887766653
No 433
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.68 E-value=0.0098 Score=47.82 Aligned_cols=72 Identities=24% Similarity=0.225 Sum_probs=50.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++.||+|+|.| +|.+|..-++.|++.|++|++++.+.. .++++.+ ..+++++..+... +. +.+.|.||-
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~---~~~i~~~~~~~~~-~d-----l~~~~lVi~ 75 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAE---QGGITWLARCFDA-DI-----LEGAFLVIA 75 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH---cCCEEEEeCCCCH-HH-----hCCcEEEEE
Confidence 46789999999 689999999999999999999987653 3333332 2357777766652 21 345666664
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+-+
T Consensus 76 at~ 78 (205)
T TIGR01470 76 ATD 78 (205)
T ss_pred CCC
Confidence 443
No 434
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.65 E-value=0.0098 Score=50.37 Aligned_cols=43 Identities=30% Similarity=0.251 Sum_probs=37.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+..++|.|++|.+|..+++.+...|.+|+.+++++++.+.+.
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK 181 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH
Confidence 4679999999999999999988899999999999887776653
No 435
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.64 E-value=0.018 Score=50.44 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=51.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh-------------------HHHHHhccc----CCCCEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQ----DEETLQV 133 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~----~~~~~~~ 133 (214)
..+++.+|+|.| .||+|..+++.|+..|. +++++|.+.- +.+.+++.+ ...+++.
T Consensus 37 ~~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 37 ERLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HHhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 345677899999 68999999999999997 7888887621 111111111 1234555
Q ss_pred EEecCCChhccchhhhCCCcEEEeccC
Q 028043 134 CKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 134 v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+...++ .+.+.+ ++.+.|+||.+.-
T Consensus 116 ~~~~i~-~~~~~~-~~~~~DlVid~~D 140 (370)
T PRK05600 116 LRERLT-AENAVE-LLNGVDLVLDGSD 140 (370)
T ss_pred eeeecC-HHHHHH-HHhCCCEEEECCC
Confidence 555554 333443 4678899887763
No 436
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.63 E-value=0.0092 Score=51.81 Aligned_cols=75 Identities=16% Similarity=0.203 Sum_probs=49.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|+|.|+ |+||..+++.+...|++|++++.+.++..+..+++. +.. ..|..+.+.+.+ ..+++|++|.+.|
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~G---a~~-vi~~~~~~~~~~-~~~~~D~vid~~g 256 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLG---ADS-FLVSTDPEKMKA-AIGTMDYIIDTVS 256 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCC---CcE-EEcCCCHHHHHh-hcCCCCEEEECCC
Confidence 4789999775 999999999988899999888877665544433332 221 123333334443 2356899998887
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 257 ~ 257 (360)
T PLN02586 257 A 257 (360)
T ss_pred C
Confidence 3
No 437
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.63 E-value=0.0081 Score=53.12 Aligned_cols=75 Identities=27% Similarity=0.333 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++++++++|.| .|-+|.-+++.|+++|. +|+++.|+.++.+++++++. +++...+.+.. .+...|+||.
T Consensus 175 ~L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~--------~~~~~l~el~~-~l~~~DvVis 244 (414)
T COG0373 175 SLKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG--------AEAVALEELLE-ALAEADVVIS 244 (414)
T ss_pred ccccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC--------CeeecHHHHHH-hhhhCCEEEE
Confidence 46789999999 68899999999999995 69999999999999887664 23334444444 3567888888
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+-|..+
T Consensus 245 sTsa~~ 250 (414)
T COG0373 245 STSAPH 250 (414)
T ss_pred ecCCCc
Confidence 877654
No 438
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.63 E-value=0.02 Score=50.53 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
++..+|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 4567899999 78999999999999998 58887765
No 439
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.62 E-value=0.0067 Score=52.75 Aligned_cols=75 Identities=17% Similarity=0.131 Sum_probs=50.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-h----hccchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-P----KDLDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~----~~v~~~~~~~~d~ 154 (214)
.+.+|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. +. ...|..+ . +.+.+..-+++|+
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~G---a~-~~i~~~~~~~~~~~~v~~~~~~g~d~ 258 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-LG---AT-DCVNPNDYDKPIQEVIVEITDGGVDY 258 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hC---CC-eEEcccccchhHHHHHHHHhCCCCCE
Confidence 4689999985 9999999998888998 79999999888766532 22 11 1223332 1 1222211236999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 259 vid~~G~ 265 (368)
T TIGR02818 259 SFECIGN 265 (368)
T ss_pred EEECCCC
Confidence 9999874
No 440
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.62 E-value=0.0036 Score=53.20 Aligned_cols=72 Identities=18% Similarity=0.293 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCC-ChhccchhhhC----CCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFE----GVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~-d~~~v~~~~~~----~~d~l 155 (214)
.||.+.|+|+.| +|.--++.-.+.|++|+++++...+.++..+.+. .+.+ .|.+ |++.+++ +.+ .+|.+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG---Ad~f-v~~~~d~d~~~~-~~~~~dg~~~~v 254 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG---ADVF-VDSTEDPDIMKA-IMKTTDGGIDTV 254 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC---ccee-EEecCCHHHHHH-HHHhhcCcceee
Confidence 689999999887 9988888777899999999999866666665443 3333 3455 7777765 344 34555
Q ss_pred Eec
Q 028043 156 ICC 158 (214)
Q Consensus 156 i~~ 158 (214)
.|.
T Consensus 255 ~~~ 257 (360)
T KOG0023|consen 255 SNL 257 (360)
T ss_pred eec
Confidence 544
No 441
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.61 E-value=0.0041 Score=49.87 Aligned_cols=40 Identities=10% Similarity=0.121 Sum_probs=30.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLF 123 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~ 123 (214)
|++.| ||+|.||..++++|++.|++|++..|+.+ +.+...
T Consensus 2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a 42 (211)
T COG2085 2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAA 42 (211)
T ss_pred cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHH
Confidence 45555 45999999999999999999999866544 444433
No 442
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.60 E-value=0.0087 Score=47.93 Aligned_cols=35 Identities=31% Similarity=0.338 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+..++|+|.|+ ||+|+.+++.|++.|. +++++|++
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45678999994 8999999999999999 69999887
No 443
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.60 E-value=0.0033 Score=53.52 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=34.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
++|.|.| .|.+|..++..|+++|++|++.+|+++..+.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~ 40 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAA 40 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHH
Confidence 5799999 8999999999999999999999999876654
No 444
>PRK07574 formate dehydrogenase; Provisional
Probab=96.58 E-value=0.013 Score=51.54 Aligned_cols=72 Identities=17% Similarity=0.083 Sum_probs=49.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.+|+|.|.| .|.||+.+++.|...|++|+..+|.....+. .. ..++. -..++++ ++...|+|+.
T Consensus 188 ~~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~-~~---~~g~~-------~~~~l~e-ll~~aDvV~l 254 (385)
T PRK07574 188 YDLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEV-EQ---ELGLT-------YHVSFDS-LVSVCDVVTI 254 (385)
T ss_pred eecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhh-Hh---hcCce-------ecCCHHH-HhhcCCEEEE
Confidence 457899999999 6899999999999999999999987532211 11 11111 1123443 3577899888
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+....
T Consensus 255 ~lPlt 259 (385)
T PRK07574 255 HCPLH 259 (385)
T ss_pred cCCCC
Confidence 77643
No 445
>PLN03139 formate dehydrogenase; Provisional
Probab=96.57 E-value=0.014 Score=51.35 Aligned_cols=70 Identities=21% Similarity=0.150 Sum_probs=48.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.||+|.|.| .|.||+.+++.|...|++|+..+|.....+... ..++. -.+++++ ++...|+|+.
T Consensus 195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~----~~g~~-------~~~~l~e-ll~~sDvV~l 261 (386)
T PLN03139 195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK----ETGAK-------FEEDLDA-MLPKCDVVVI 261 (386)
T ss_pred cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh----hcCce-------ecCCHHH-HHhhCCEEEE
Confidence 467899999999 799999999999999999999988643222111 11111 1123444 3567899888
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+..
T Consensus 262 ~lP 264 (386)
T PLN03139 262 NTP 264 (386)
T ss_pred eCC
Confidence 764
No 446
>PLN02494 adenosylhomocysteinase
Probab=96.56 E-value=0.0092 Score=53.61 Aligned_cols=39 Identities=23% Similarity=0.317 Sum_probs=35.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
+.||+++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus 252 LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~ 290 (477)
T PLN02494 252 IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICA 290 (477)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence 5789999999 67999999999999999999999988654
No 447
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.56 E-value=0.01 Score=50.65 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=50.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChh--ccchhhhC-CCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK--DLDPAIFE-GVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~--~v~~~~~~-~~d~li 156 (214)
.+.+|+|+|+ |++|..+++.+...|++ |+++++++++.+.+. ++. +. ...|..+.+ .+.+..-+ ++|++|
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~g---a~-~~i~~~~~~~~~~~~~~~~~~~d~vi 236 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALG---AD-FVINSGQDDVQEIRELTSGAGADVAI 236 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC---CC-EEEcCCcchHHHHHHHhCCCCCCEEE
Confidence 4789999985 99999999999899999 999999888776543 222 11 123333322 23221112 689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 237 d~~g~ 241 (339)
T cd08239 237 ECSGN 241 (339)
T ss_pred ECCCC
Confidence 88774
No 448
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.56 E-value=0.012 Score=49.61 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=51.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~-~~~d~li 156 (214)
.+.+++|.|++|.+|.++++.+...|++|+++.++.++.+.+.+ . + +.. ..+..+.+ .+.+..- .++|+++
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-g--~~~-~~~~~~~~~~~~i~~~~~~~~~d~v~ 213 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-G--IGP-VVSTEQPGWQDKVREAAGGAPISVAL 213 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-C--CCE-EEcCCCchHHHHHHHHhCCCCCcEEE
Confidence 46899999999999999999999999999999998887766643 2 2 211 11222221 2222111 2689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 214 d~~g~ 218 (324)
T cd08292 214 DSVGG 218 (324)
T ss_pred ECCCC
Confidence 88764
No 449
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.54 E-value=0.011 Score=53.13 Aligned_cols=41 Identities=27% Similarity=0.250 Sum_probs=36.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
..+.||+++|.| .|.||+.+++.|...|++|+++.+++.+.
T Consensus 250 ~~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 250 VMIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 357899999999 56799999999999999999998887655
No 450
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.53 E-value=0.043 Score=43.77 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~ 115 (214)
+++++|+|.| .||+|.++++.|+..|.. ++++|.+
T Consensus 19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4567899998 566999999999999985 8888765
No 451
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.52 E-value=0.0096 Score=48.58 Aligned_cols=36 Identities=14% Similarity=0.237 Sum_probs=32.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~ 115 (214)
.+++++++|.|| |+.|+.+++.|.+.|. +|++++|+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 356789999995 9999999999999997 49999998
No 452
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.51 E-value=0.0074 Score=46.51 Aligned_cols=42 Identities=24% Similarity=0.295 Sum_probs=35.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|++|-+.| .|-+|+.+++.|++.|++|.+.+|++++.+++.+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~ 42 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE 42 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH
Confidence 46899999 6999999999999999999999999998877653
No 453
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.51 E-value=0.028 Score=48.48 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=35.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~ 118 (214)
..+.+|+|.|.| .|.||+.+++.|...|++|++.+|++..
T Consensus 142 ~~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 142 KPVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred cccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 457899999998 7999999999999999999999998754
No 454
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=96.50 E-value=0.016 Score=50.72 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=50.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+.+++|.|+ |+||...++.+...|++|++++++.++..+..+.+. +.. ..|..+.+.+.+. .+++|+++.+.|
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lG---a~~-~i~~~~~~~v~~~-~~~~D~vid~~G 251 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLG---ADS-FLVTTDSQKMKEA-VGTMDFIIDTVS 251 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCC---CcE-EEcCcCHHHHHHh-hCCCcEEEECCC
Confidence 4689999986 999999999988999999999887655333333332 221 1233333344432 356899999887
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 252 ~ 252 (375)
T PLN02178 252 A 252 (375)
T ss_pred c
Confidence 4
No 455
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.50 E-value=0.0017 Score=47.57 Aligned_cols=71 Identities=15% Similarity=0.147 Sum_probs=40.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHC-CCeEE-EEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSR-NIKSR-LLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~-G~~V~-~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+|.|.||+|.+|+.+++.|.+. ..+++ +++++.+....+....+ ...-....-| .+ .+ .+.++|++|.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~---~~--~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-AD---PE--ELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TS---GH--HHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cc---hh--HhhcCCEEEecC
Confidence 5899999999999999999984 34544 45555523222221111 0111111112 22 22 247899999987
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
+
T Consensus 75 ~ 75 (121)
T PF01118_consen 75 P 75 (121)
T ss_dssp C
T ss_pred c
Confidence 5
No 456
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.48 E-value=0.019 Score=51.38 Aligned_cols=75 Identities=20% Similarity=0.230 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+.+|+|+|+|+ |++|.++++.|+++|++|.+.+.++.. .+++.+ . ..++.+..++..+ ..+.+.|.||.
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~-~-~~gi~~~~g~~~~------~~~~~~d~vv~ 73 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGK-M-FDGLVFYTGRLKD------ALDNGFDILAL 73 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhh-c-cCCcEEEeCCCCH------HHHhCCCEEEE
Confidence 45789999996 589999999999999999999876543 222211 0 1245544433221 12357899999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
..|+..
T Consensus 74 spgi~~ 79 (445)
T PRK04308 74 SPGISE 79 (445)
T ss_pred CCCCCC
Confidence 999863
No 457
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.47 E-value=0.012 Score=46.00 Aligned_cols=73 Identities=18% Similarity=0.223 Sum_probs=46.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh---hH---------------HHHHhccc----CCCCEEEEEecCCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP---EK---------------ATTLFGKQ----DEETLQVCKGDTRN 140 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~---~~---------------~~~~~~~~----~~~~~~~v~~Di~d 140 (214)
+|+|.| .||+|..+++.|+..|.. ++++|.+. +. .+.+.+.+ +..+++.+...+.+
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 478888 699999999999999994 99998874 11 11111111 12234445555543
Q ss_pred hhccchhhhCCCcEEEecc
Q 028043 141 PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 141 ~~~v~~~~~~~~d~li~~A 159 (214)
+.+.+ .+++.|+||.+.
T Consensus 80 -~~~~~-~l~~~DlVi~~~ 96 (174)
T cd01487 80 -NNLEG-LFGDCDIVVEAF 96 (174)
T ss_pred -hhHHH-HhcCCCEEEECC
Confidence 34443 467889888774
No 458
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.46 E-value=0.01 Score=50.40 Aligned_cols=106 Identities=14% Similarity=0.169 Sum_probs=60.9
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
|.|.|| |.+|..++..|+..|. +|++++++++.++.....+. ..... +.. -+| .+ .+.+.|+||.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~-t~d---~~--~l~dADiVIi 72 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTG-TND---YE--DIAGSDVVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEE-cCC---HH--HhCCCCEEEE
Confidence 468897 9999999999998876 99999998765432111110 11111 111 012 22 2568999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
++|....+. ..-.+....|+.-...+++.+.+ . ...+|++|
T Consensus 73 t~g~p~~~~---~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 73 TAGIPRKPG---MSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred ecCCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999753221 11122334566666666666533 2 23444444
No 459
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.45 E-value=0.01 Score=41.18 Aligned_cols=66 Identities=23% Similarity=0.314 Sum_probs=45.3
Q ss_pred EEEEEcCchHHHHHHHHHHHHCC---CeEEEE-EcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRN---IKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G---~~V~~~-~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+|.|. |+|.+|.++++.|++.| ++|.+. .|++++.+++.++.. +..... ++.+ +.+..|+||.+.
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~---~~~~~~--~~~~-----~~~~advvilav 69 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG---VQATAD--DNEE-----AAQEADVVILAV 69 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT---TEEESE--EHHH-----HHHHTSEEEE-S
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc---cccccC--ChHH-----hhccCCEEEEEE
Confidence 35666 48999999999999999 899955 999999988866543 111111 1111 234689999877
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
-
T Consensus 70 ~ 70 (96)
T PF03807_consen 70 K 70 (96)
T ss_dssp -
T ss_pred C
Confidence 4
No 460
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.45 E-value=0.021 Score=47.66 Aligned_cols=44 Identities=30% Similarity=0.402 Sum_probs=39.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
.+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 175 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE 175 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 47899999999999999999999999999999998887766543
No 461
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.45 E-value=0.0049 Score=53.35 Aligned_cols=68 Identities=24% Similarity=0.351 Sum_probs=41.7
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEE---EEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSR---LLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~---~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|.|.||+|++|+++++.|.++|+.++ .++++.+..+.+. + .+......|+. .+ .+.++|++|-++|
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~--~~~~~~~~~~~-~~-----~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--F--KGKELEVNEAK-IE-----SFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--e--CCeeEEEEeCC-hH-----HhcCCCEEEECCC
Confidence 479999999999999999999888643 4445543333221 1 12344445553 11 1245677666665
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 71 ~ 71 (339)
T TIGR01296 71 G 71 (339)
T ss_pred H
Confidence 4
No 462
>PLN02740 Alcohol dehydrogenase-like
Probab=96.44 E-value=0.0094 Score=52.09 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=51.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-----hccchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-----KDLDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-----~~v~~~~~~~~d~ 154 (214)
.+.+|+|.|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. +.. ..|..+. +.+.+..-+++|+
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~G---a~~-~i~~~~~~~~~~~~v~~~~~~g~dv 271 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-MG---ITD-FINPKDSDKPVHERIREMTGGGVDY 271 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-cC---CcE-EEecccccchHHHHHHHHhCCCCCE
Confidence 5789999995 9999999999888999 59999999888776543 22 211 1233322 1233211126999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 272 vid~~G~ 278 (381)
T PLN02740 272 SFECAGN 278 (381)
T ss_pred EEECCCC
Confidence 9999984
No 463
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.43 E-value=0.058 Score=49.17 Aligned_cols=107 Identities=17% Similarity=0.130 Sum_probs=67.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-------------hhccch-
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-------------PKDLDP- 146 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-------------~~~v~~- 146 (214)
.+.+++|.| .|.+|...++.+...|++|+++++++++++.... + +.+++..|..+ .+..++
T Consensus 163 p~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---Ga~~v~v~~~e~g~~~~gYa~~~s~~~~~~~ 237 (511)
T TIGR00561 163 PPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---GAEFLELDFKEEGGSGDGYAKVMSEEFIAAE 237 (511)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEEeccccccccccccceeecCHHHHHHH
Confidence 457999999 5999999999999999999999999988766543 2 34455555421 111110
Q ss_pred -----hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccc
Q 028043 147 -----AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV 205 (214)
Q Consensus 147 -----~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~ 205 (214)
....+.|++|+++-+...+ .+. . -+...++.++++ ..||-+++..+
T Consensus 238 ~~~~~e~~~~~DIVI~TalipG~~-----aP~-L------it~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 238 MELFAAQAKEVDIIITTALIPGKP-----APK-L------ITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHHHHhCCCCEEEECcccCCCC-----CCe-e------ehHHHHhhCCCC-CEEEEeeeCCC
Confidence 0135799999999443211 110 1 133445555665 56777777544
No 464
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.43 E-value=0.019 Score=48.06 Aligned_cols=76 Identities=22% Similarity=0.261 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~~v~~~~~~~~d~li~~A 159 (214)
.+.+++|.|++|.+|..+++.+...|++|+.+++++++.+.+. .+. +..+..+-.+ .+.+.+. -+++|.++++.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~ 216 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELG---ADEVVIDDGAIAEQLRAA-PGGFDKVLELV 216 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC---CcEEEecCccHHHHHHHh-CCCceEEEECC
Confidence 4689999999999999999999999999999999887766553 222 2222111111 1223222 13689999887
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
|.
T Consensus 217 ~~ 218 (320)
T cd08243 217 GT 218 (320)
T ss_pred Ch
Confidence 63
No 465
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.41 E-value=0.0079 Score=47.29 Aligned_cols=38 Identities=26% Similarity=0.327 Sum_probs=32.2
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL 122 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~ 122 (214)
+|.|.|| |.+|+.++..++..|++|++.+++++.++..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence 5889996 9999999999999999999999998876543
No 466
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.40 E-value=0.015 Score=49.39 Aligned_cols=78 Identities=19% Similarity=0.206 Sum_probs=54.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++.||+|.|.|.++-+|+.++..|+++|++|+++.++...+++..+ +..++..=+.++..++... -+...+|-.
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~-----~ADIVIsavg~~~~v~~~~-ik~GaiVID 229 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR-----QADIVVAAVGRPRLIDADW-LKPGAVVID 229 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh-----cCCEEEEecCChhcccHhh-ccCCcEEEE
Confidence 4689999999999999999999999999999999777655555432 1234444456666666532 234445545
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.|+.
T Consensus 230 vgin 233 (301)
T PRK14194 230 VGIN 233 (301)
T ss_pred eccc
Confidence 5544
No 467
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.39 E-value=0.011 Score=51.39 Aligned_cols=100 Identities=16% Similarity=0.093 Sum_probs=55.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEEE-EcChhHHHHHhcccCCCCEEEE-EecCCChhccchhhhCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLL-LRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++|.|.||||.+|+.+++.|.+. +.+++.+ +++.+..+.+.+... .+... ..++.+. +.++ +..++|++|.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~--~l~~~~~~~~~~~-~~~~-~~~~~DvVf~al 76 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP--HLRGLVDLNLEPI-DEEE-IAEDADVVFLAL 76 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc--cccccCCceeecC-CHHH-hhcCCCEEEECC
Confidence 47999999999999999999976 6677743 544422222211111 11111 1112211 1222 224799999888
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV 205 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~ 205 (214)
+.. ....++..+.....+||=.|+..-
T Consensus 77 P~~-------------------~s~~~~~~~~~~G~~VIDlS~~fR 103 (346)
T TIGR01850 77 PHG-------------------VSAELAPELLAAGVKVIDLSADFR 103 (346)
T ss_pred Cch-------------------HHHHHHHHHHhCCCEEEeCChhhh
Confidence 632 233444444333367887777643
No 468
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=96.38 E-value=0.075 Score=49.11 Aligned_cols=126 Identities=21% Similarity=0.218 Sum_probs=77.0
Q ss_pred CCCCCCEEEEEcCc-hHHHHHHHHHHHHCCCeEEEEEcCh--hHHHH---HhcccC--CCCEEEEEecCCChhccchhh-
Q 028043 78 PASSSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDP--EKATT---LFGKQD--EETLQVCKGDTRNPKDLDPAI- 148 (214)
Q Consensus 78 ~~~~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~--~~~~~---~~~~~~--~~~~~~v~~Di~d~~~v~~~~- 148 (214)
....+|.++||||+ |.||.+++..|++-|++|+++.-+- ++.+- +..... +..+.++..+..+..+++..+
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe 471 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE 471 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence 44567999999987 7899999999999999999987643 23222 221111 344666778888777776532
Q ss_pred ---------h-------C---CCcEEEeccCCCCCCCCCCCC--CCchhHHHHHHHHHHHHHhcc-----CC---CeEEE
Q 028043 149 ---------F-------E---GVTHVICCTGTTAFPSRRWDG--DNTPEKVDWEGVRNLVSALPS-----SL---KRIVL 199 (214)
Q Consensus 149 ---------~-------~---~~d~li~~Ag~~~~~~~~~~~--~~~~~~vNv~g~~~l~~a~~~-----~~---~~iV~ 199 (214)
+ + .+|.+|-.|++.......... .+..+++-+.....++-.++. ++ -++|.
T Consensus 472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVL 551 (866)
T COG4982 472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVL 551 (866)
T ss_pred HhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEe
Confidence 1 1 367888888865432211111 122335555566666655521 22 25777
Q ss_pred Eccc
Q 028043 200 VSSV 203 (214)
Q Consensus 200 vSS~ 203 (214)
-.|-
T Consensus 552 PgSP 555 (866)
T COG4982 552 PGSP 555 (866)
T ss_pred cCCC
Confidence 6664
No 469
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=96.36 E-value=0.015 Score=50.49 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=50.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~~~d~li 156 (214)
.+.+|+|.|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. +. ...|..+.+ .+.+..-+++|++|
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~G---a~-~~i~~~~~~~~~~i~~~~~~g~d~vi 264 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LG---AT-ATVNAGDPNAVEQVRELTGGGVDYAF 264 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-cC---Cc-eEeCCCchhHHHHHHHHhCCCCCEEE
Confidence 4689999985 8999999988888999 59999999888765432 21 21 123333322 22221113689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 265 d~~G~ 269 (371)
T cd08281 265 EMAGS 269 (371)
T ss_pred ECCCC
Confidence 98874
No 470
>PRK07411 hypothetical protein; Validated
Probab=96.35 E-value=0.036 Score=48.92 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHH-------------------HHHhccc----CCCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TTLFGKQ----DEETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~----~~~~~~~v~ 135 (214)
++..+|+|.| .||+|..+++.|+..|. +++++|.+.-.. +.+++.+ ...+++.+.
T Consensus 36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 4567899999 78999999999999998 588777652111 1111111 123455555
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
..++.. ...+ ++.+.|+||.+..
T Consensus 115 ~~~~~~-~~~~-~~~~~D~Vvd~~d 137 (390)
T PRK07411 115 TRLSSE-NALD-ILAPYDVVVDGTD 137 (390)
T ss_pred cccCHH-hHHH-HHhCCCEEEECCC
Confidence 555543 3333 4678898887764
No 471
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.35 E-value=0.02 Score=48.22 Aligned_cols=76 Identities=25% Similarity=0.271 Sum_probs=51.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~~-~~~d~li 156 (214)
.+..++|+|++|.+|..+++.+...|++|+.+++++++.+.+. .+. +.. ..|..+.+. +.+..- .++|.++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g---~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl 216 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALG---ADV-AVDYTRPDWPDQVREALGGGGVTVVL 216 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---CCE-EEecCCccHHHHHHHHcCCCCceEEE
Confidence 4678999999999999999999999999999999888776653 222 111 123333222 222111 2589999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
++.|.
T Consensus 217 ~~~g~ 221 (324)
T cd08244 217 DGVGG 221 (324)
T ss_pred ECCCh
Confidence 98764
No 472
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.33 E-value=0.0028 Score=61.85 Aligned_cols=127 Identities=18% Similarity=0.191 Sum_probs=78.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHH--HH-HhcccCCCCE--EEEEecCCChhccchhh-----h
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKA--TT-LFGKQDEETL--QVCKGDTRNPKDLDPAI-----F 149 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~--~~-~~~~~~~~~~--~~v~~Di~d~~~v~~~~-----~ 149 (214)
..|..+|+||-||.|.++++.|.++|++ ++++.|+--+- +. ....+...++ .+-..|++..+..+..+ +
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence 4689999999999999999999999997 66677764221 11 1222223344 33445676655554422 4
Q ss_pred CCCcEEEeccCCCCCCCCC---CCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~---~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~ 207 (214)
+.+-.++|.|.+.....-+ ..+..+.-+.-+.||.++=+.-+ .-.+.+|..||+....
T Consensus 1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGR 1910 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGR 1910 (2376)
T ss_pred ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccC
Confidence 5688899999876522211 12222222334667776655433 3456788888876543
No 473
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.33 E-value=0.018 Score=50.96 Aligned_cols=42 Identities=24% Similarity=0.223 Sum_probs=37.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
.+.|++|+|.| .|.||+.+++.+...|++|+++++++.+..+
T Consensus 192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~ 233 (406)
T TIGR00936 192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALE 233 (406)
T ss_pred CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHH
Confidence 35789999999 7889999999999999999999998876543
No 474
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=96.28 E-value=0.029 Score=49.54 Aligned_cols=44 Identities=14% Similarity=0.162 Sum_probs=36.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChhHHHHHhc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFG 124 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~ 124 (214)
.+.+|+|.||+|+||...++.+...|. +|+++++++++++.+.+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~ 221 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR 221 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence 467999999999999998887777654 79999999988776544
No 475
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.27 E-value=0.022 Score=47.37 Aligned_cols=43 Identities=26% Similarity=0.244 Sum_probs=37.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+.+++|+|++|.+|..+++.+...|++|+.++++.++.+.+.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR 181 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH
Confidence 4689999999999999999999999999999999887766553
No 476
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=96.26 E-value=0.019 Score=47.97 Aligned_cols=75 Identities=15% Similarity=0.146 Sum_probs=48.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhhh-CCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF-EGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~~-~~~d~li~ 157 (214)
.+++|+|.|+ |+||...++.+...|++ |+++++++++.+.+.+ +. +.. ..|..+. +.+.+..- .++|++|.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~-~G---a~~-~i~~~~~~~~~~~~~~~~g~d~vid 193 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALS-FG---ATA-LAEPEVLAERQGGLQNGRGVDVALE 193 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cC---CcE-ecCchhhHHHHHHHhCCCCCCEEEE
Confidence 5789999986 89999999988889997 8888888877655432 21 111 1122221 22222111 25899999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
+.|.
T Consensus 194 ~~G~ 197 (280)
T TIGR03366 194 FSGA 197 (280)
T ss_pred CCCC
Confidence 8874
No 477
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.26 E-value=0.0086 Score=51.79 Aligned_cols=27 Identities=30% Similarity=0.448 Sum_probs=24.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIK 108 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~ 108 (214)
+++|.|+||||.+|+++++.|.++++.
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP 30 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFP 30 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCC
Confidence 368999999999999999999987764
No 478
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=96.25 E-value=0.17 Score=41.37 Aligned_cols=104 Identities=12% Similarity=0.136 Sum_probs=67.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc---------------cCCCCEEEEEecCCChhccch
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---------------QDEETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---------------~~~~~~~~v~~Di~d~~~v~~ 146 (214)
+.+|+|-|++.|. =+..|+++|++|++++-++...+...++ ..+.+++++.+|+-+...-..
T Consensus 44 ~~rvLvPgCGkg~---D~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l~~~~~ 120 (226)
T PRK13256 44 SSVCLIPMCGCSI---DMLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNLPKIAN 120 (226)
T ss_pred CCeEEEeCCCChH---HHHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCCCcccc
Confidence 4689999966543 3567789999999999999888775432 123468889999988653222
Q ss_pred hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEE
Q 028043 147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~v 200 (214)
..++.|.|+=.+.....+. +.--.-...+.+.++++ ++++.+
T Consensus 121 -~~~~fD~VyDra~~~Alpp----------~~R~~Y~~~l~~lL~pg-g~llll 162 (226)
T PRK13256 121 -NLPVFDIWYDRGAYIALPN----------DLRTNYAKMMLEVCSNN-TQILLL 162 (226)
T ss_pred -ccCCcCeeeeehhHhcCCH----------HHHHHHHHHHHHHhCCC-cEEEEE
Confidence 2467899888777655332 11222344556666665 444444
No 479
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=96.25 E-value=0.0089 Score=47.26 Aligned_cols=41 Identities=27% Similarity=0.209 Sum_probs=32.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|+|.|.| .|++|..+|..|++.|++|++++.++++.+.+.+
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~ 41 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNN 41 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHT
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhh
Confidence 5788887 9999999999999999999999999998887754
No 480
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=96.22 E-value=0.023 Score=47.18 Aligned_cols=43 Identities=26% Similarity=0.213 Sum_probs=38.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+.+++|.|++|++|..+++.+...|++|+++++++++.+.+.
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 178 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR 178 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 5689999999999999999999999999999999888776653
No 481
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.22 E-value=0.026 Score=45.83 Aligned_cols=77 Identities=17% Similarity=0.003 Sum_probs=49.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcCh----------hHHHHHhcccCCCCEEEE-EecCCChhccch
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDP----------EKATTLFGKQDEETLQVC-KGDTRNPKDLDP 146 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~----------~~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~ 146 (214)
++++++|+|.| -|.+|+++++.|.+.|.+|+.+ +.+. +..+...+.. .+..+ .+|..+.+.+..
T Consensus 20 ~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~ 95 (217)
T cd05211 20 SLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG---GSARVKVQDYFPGEAILG 95 (217)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC---CccccCcccccCccccee
Confidence 45789999999 7999999999999999976665 5444 3333222211 11111 133334444432
Q ss_pred hhhCCCcEEEeccCCC
Q 028043 147 AIFEGVTHVICCTGTT 162 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~ 162 (214)
.++|++|-+|...
T Consensus 96 ---~~~DVlipaA~~~ 108 (217)
T cd05211 96 ---LDVDIFAPCALGN 108 (217)
T ss_pred ---ccccEEeeccccC
Confidence 2789999998643
No 482
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.22 E-value=0.032 Score=38.23 Aligned_cols=36 Identities=31% Similarity=0.319 Sum_probs=30.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLR 114 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r 114 (214)
.++.+|+++|.|+ |.+|+.+++.|.+. +.+|.+.+|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3457799999997 99999999999998 567888777
No 483
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.21 E-value=0.02 Score=48.55 Aligned_cols=78 Identities=15% Similarity=0.147 Sum_probs=54.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++.||+|+|.|.++-+|+.++..|+++|+.|+++. |..+ +++..+ ...++..=+.+++.++.. +-....+|-
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~-----~ADIVIsavg~~~~v~~~-~lk~GavVI 227 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCR-----RADILVAAVGRPEMVKGD-WIKPGATVI 227 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHh-----cCCEEEEecCChhhcchh-eecCCCEEE
Confidence 46899999999999999999999999999999994 6543 333322 233455556666666653 223455555
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
..|...
T Consensus 228 DvGin~ 233 (296)
T PRK14188 228 DVGINR 233 (296)
T ss_pred EcCCcc
Confidence 666654
No 484
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=96.17 E-value=0.022 Score=48.30 Aligned_cols=42 Identities=21% Similarity=0.433 Sum_probs=36.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~ 123 (214)
+.+++|.||+|++|..+++.+... |++|+++++++++.+.+.
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~ 191 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL 191 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH
Confidence 689999999999999998777776 999999999887766653
No 485
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=96.15 E-value=0.019 Score=49.85 Aligned_cols=75 Identities=20% Similarity=0.172 Sum_probs=49.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-----hccchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-----KDLDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-----~~v~~~~~~~~d~ 154 (214)
.+.+|+|.|+ |+||...++.+...|. +|+++++++++.+.+.+ +. .. .+ .|..+. +.+++..-+++|+
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~G-a~-~~--i~~~~~~~~~~~~v~~~~~~~~d~ 260 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FG-VT-EF--VNPKDHDKPVQEVIAEMTGGGVDY 260 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cC-Cc-eE--EcccccchhHHHHHHHHhCCCCCE
Confidence 5789999985 9999999998888999 79999999888776532 22 11 11 222221 1122211136899
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
++.+.|.
T Consensus 261 vid~~G~ 267 (369)
T cd08301 261 SFECTGN 267 (369)
T ss_pred EEECCCC
Confidence 9988763
No 486
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.13 E-value=0.034 Score=42.78 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=32.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR 114 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r 114 (214)
.+++|++|+|.| +|-+|...++.|++.|++|++++.
T Consensus 9 l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 9 FNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred EEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC
Confidence 456899999999 689999999999999999998853
No 487
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.12 E-value=0.042 Score=46.40 Aligned_cols=44 Identities=27% Similarity=0.273 Sum_probs=38.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL 122 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~ 122 (214)
++.||+++|.|+++-+|+.++..|.++|++|+++.++...+++.
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~ 198 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASY 198 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence 56899999999999999999999999999999998876555443
No 488
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.11 E-value=0.032 Score=46.79 Aligned_cols=40 Identities=15% Similarity=0.055 Sum_probs=35.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
|+|.|.| .|.||..++..|.+.|++|.+.+|+++..+...
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~ 40 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAI 40 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 3688888 799999999999999999999999988776654
No 489
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=96.09 E-value=0.031 Score=47.02 Aligned_cols=42 Identities=36% Similarity=0.411 Sum_probs=36.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
+.+|+|.|++|.+|..+++.+...|.+|+++++++++.+.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 188 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK 188 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 358999999999999999988889999999999988776653
No 490
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.08 E-value=0.05 Score=44.64 Aligned_cols=108 Identities=21% Similarity=0.246 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHH-------------------HHHhcccC--CCCEEEEE-e
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TTLFGKQD--EETLQVCK-G 136 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~--~~~~~~v~-~ 136 (214)
+++.+|+|.| -||+|++.+++|++.|. ++.+++-+.-.. +-+++.+. ++..++.. -
T Consensus 28 l~~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~ 106 (263)
T COG1179 28 LKQAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN 106 (263)
T ss_pred HhhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence 3556899999 79999999999999998 577777642111 11111111 33444332 2
Q ss_pred cCCChhccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 137 Di~d~~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
|.-.++.+++.+..++|.||-+.= |+..-..|+..|... ++-+|||.++.+.
T Consensus 107 ~f~t~en~~~~~~~~~DyvIDaiD------------------~v~~Kv~Li~~c~~~--ki~vIss~Gag~k 158 (263)
T COG1179 107 DFITEENLEDLLSKGFDYVIDAID------------------SVRAKVALIAYCRRN--KIPVISSMGAGGK 158 (263)
T ss_pred hhhCHhHHHHHhcCCCCEEEEchh------------------hhHHHHHHHHHHHHc--CCCEEeeccccCC
Confidence 445666777654557888875431 233334566666443 2345677776654
No 491
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=96.07 E-value=0.034 Score=47.17 Aligned_cols=74 Identities=22% Similarity=0.248 Sum_probs=48.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhh-CCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIF-EGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~-~~~d~li~~ 158 (214)
..++++||+|++|..+++.....|.+|+++++++++.+.+.+ +. .. .+ .|..+.+ .+.+..- .++|+++++
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g-~~-~~--i~~~~~~~~~~v~~~~~~~~~d~vid~ 219 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IG-AE-YV--LNSSDPDFLEDLKELIAKLNATIFFDA 219 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC-Cc-EE--EECCCccHHHHHHHHhCCCCCcEEEEC
Confidence 445555999999999998888899999999999888776543 21 11 12 2222222 2222111 268999998
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
.|.
T Consensus 220 ~g~ 222 (324)
T cd08291 220 VGG 222 (324)
T ss_pred CCc
Confidence 773
No 492
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.07 E-value=0.038 Score=49.94 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=52.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.+|+|+|.| .|+.|+++++.|++.|++|.+.+++.....++.+ ..++.+..++- +.+ .+.++|.||.
T Consensus 11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~---~~gi~~~~~~~-~~~-----~~~~~d~vV~ 80 (473)
T PRK00141 11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIE---VTGVADISTAE-ASD-----QLDSFSLVVT 80 (473)
T ss_pred ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHH---hcCcEEEeCCC-chh-----HhcCCCEEEe
Confidence 345678899999 8899999999999999999999987655433222 22444443211 111 1346799999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
..|+..
T Consensus 81 Spgi~~ 86 (473)
T PRK00141 81 SPGWRP 86 (473)
T ss_pred CCCCCC
Confidence 999864
No 493
>PLN02306 hydroxypyruvate reductase
Probab=96.06 E-value=0.033 Score=49.08 Aligned_cols=39 Identities=13% Similarity=0.083 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHH-HCCCeEEEEEcChh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPE 117 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~ 117 (214)
..+.||++.|.| .|.||+++++.|. ..|.+|+..++...
T Consensus 161 ~~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~ 200 (386)
T PLN02306 161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQS 200 (386)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence 357899999999 8999999999986 78999999998653
No 494
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=96.06 E-value=0.026 Score=48.91 Aligned_cols=75 Identities=16% Similarity=0.086 Sum_probs=49.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-----hhccchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-----PKDLDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-----~~~v~~~~~~~~d~ 154 (214)
.+.+|+|.| +|++|...++.+...|. +|+++++++++.+.+.+ +. +. ...|..+ .+.+.+..-+++|+
T Consensus 184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~-~g---a~-~~i~~~~~~~~~~~~~~~~~~~g~d~ 257 (365)
T cd08277 184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE-FG---AT-DFINPKDSDKPVSEVIREMTGGGVDY 257 (365)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cC---CC-cEeccccccchHHHHHHHHhCCCCCE
Confidence 578999997 59999999998888999 69999998888765532 22 11 1122222 12233211236899
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.+.|.
T Consensus 258 vid~~g~ 264 (365)
T cd08277 258 SFECTGN 264 (365)
T ss_pred EEECCCC
Confidence 9998773
No 495
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.04 E-value=0.03 Score=48.36 Aligned_cols=75 Identities=19% Similarity=0.104 Sum_probs=50.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhh-CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIF-EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~-~~~d~l 155 (214)
.+++|+|.|+ |++|...++.+...|++ |+++++++++.+.+.+ +. +. ...|..+.+ .+.+..- .++|++
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~G---a~-~~i~~~~~~~~~~i~~~~~~~g~d~v 249 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-FG---AT-HTVNSSGTDPVEAIRALTGGFGADVV 249 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cC---Cc-eEEcCCCcCHHHHHHHHhCCCCCCEE
Confidence 4789999985 99999999988889995 9889998888766542 22 11 112333322 2222111 258999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.+.|.
T Consensus 250 id~~g~ 255 (358)
T TIGR03451 250 IDAVGR 255 (358)
T ss_pred EECCCC
Confidence 998884
No 496
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.04 E-value=0.014 Score=48.44 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=28.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHH-CCCeEEE-EEcChhH
Q 028043 83 KLVLVAGGSGGVGQLVVASLLS-RNIKSRL-LLRDPEK 118 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r~~~~ 118 (214)
++|.|+|++|.+|+.+++.+.+ .+.+++. +++++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~ 39 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSP 39 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc
Confidence 5899999999999999999886 4788666 5565544
No 497
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.03 E-value=0.27 Score=39.72 Aligned_cols=76 Identities=13% Similarity=0.012 Sum_probs=51.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---------------CCCCEEEEEecCCChhccch
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---------------DEETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---------------~~~~~~~v~~Di~d~~~v~~ 146 (214)
+.+||+-|++.| + =+..|+++|++|++++.++..++.+.++. ...+++++.+|+.+.+.-
T Consensus 35 ~~rvLd~GCG~G--~-da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-- 109 (213)
T TIGR03840 35 GARVFVPLCGKS--L-DLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA-- 109 (213)
T ss_pred CCeEEEeCCCch--h-HHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc--
Confidence 468999995544 3 45667889999999999998877642211 134577888999876431
Q ss_pred hhhCCCcEEEeccCCCC
Q 028043 147 AIFEGVTHVICCTGTTA 163 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~ 163 (214)
..+..|.++-.+...+
T Consensus 110 -~~~~fD~i~D~~~~~~ 125 (213)
T TIGR03840 110 -DLGPVDAVYDRAALIA 125 (213)
T ss_pred -cCCCcCEEEechhhcc
Confidence 1245788887765544
No 498
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.02 E-value=0.034 Score=42.94 Aligned_cols=79 Identities=15% Similarity=0.172 Sum_probs=47.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++.||+++|.|.+.-+|+-++..|.++|+.|.++..+...+++..+ . ..++..-+..+..++...+ +.+.+|-.
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~---~--ADIVVsa~G~~~~i~~~~i-k~gavVID 106 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR---R--ADIVVSAVGKPNLIKADWI-KPGAVVID 106 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT---T--SSEEEE-SSSTT-B-GGGS--TTEEEEE
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee---e--ccEEeeeeccccccccccc-cCCcEEEe
Confidence 4689999999999999999999999999999998777655555432 2 2233344445555554222 34566666
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.|...
T Consensus 107 vG~~~ 111 (160)
T PF02882_consen 107 VGINY 111 (160)
T ss_dssp --CEE
T ss_pred cCCcc
Confidence 66543
No 499
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.02 E-value=0.014 Score=39.13 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=22.2
Q ss_pred CEEEEEcCchHHHHH--HHHHHHHCCCeEEEEEcC
Q 028043 83 KLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 83 k~vlITGasggIG~~--la~~L~~~G~~V~~~~r~ 115 (214)
|+|||+|+|+|.|.+ ++..+ ..|++.+.+...
T Consensus 40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE 73 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE 73 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence 899999999999998 55555 678888877653
No 500
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=96.01 E-value=0.046 Score=47.34 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=50.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+.+++|.| +|++|...++.+...|++|+++++++++.+...+.+. +.. ..|-.+.+.+.+ ...++|+++.+.|
T Consensus 180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~G---a~~-~i~~~~~~~~~~-~~~~~D~vid~~g 253 (357)
T PLN02514 180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLG---ADD-YLVSSDAAEMQE-AADSLDYIIDTVP 253 (357)
T ss_pred CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcC---CcE-EecCCChHHHHH-hcCCCcEEEECCC
Confidence 467899996 5999999999888899999999888877655543332 111 122233333433 2346899999887
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 254 ~ 254 (357)
T PLN02514 254 V 254 (357)
T ss_pred c
Confidence 3
Done!