AmiGO: BLAST Results


BLAST match view associations BLAST with MTSSB MTSSB MTSSB AT4G11060	protein from Arabidopsis thaliana	2.5e-65
BLAST match view associations BLAST with AT3G18580 AT3G18580 AT3G18580	protein from Arabidopsis thaliana	1.5e-19
BLAST match view associations BLAST with ssb ssb ssb ssDNA-binding protein	protein from Escherichia coli K-12	2.2e-09
BLAST match view associations BLAST with ECH_0815 ECH_0815 ECH_0815 single-strand binding protein	protein from Ehrlichia chaffeensis str. Arkansas	1.6e-08
BLAST match view associations BLAST with CBU_0271 CBU_0271 CBU_0271 single-strand binding protein	protein from Coxiella burnetii RSA 493	2.0e-08
BLAST match view associations BLAST with ssbp1 ssbp1 ssbp1 single-stranded DNA binding protein 1	gene_product from Danio rerio	3.3e-08
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Pongo abelii	1.1e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Oryctolagus cuniculus	1.1e-07
BLAST match view associations BLAST with PFE0435c PFE0435c PFE0435c single-strand binding protein, putative	gene from Plasmodium falciparum	1.2e-07
BLAST match view associations BLAST with PFE0435c PFE0435c PFE0435c Single-strand binding protein, putative	protein from Plasmodium falciparum 3D7	1.2e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Homo sapiens	1.4e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Homo sapiens	1.4e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein	protein from Sus scrofa	1.4e-07
BLAST match view associations BLAST with APH_0465 APH_0465 APH_0465 single-strand binding protein	protein from Anaplasma phagocytophilum HZ	1.4e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein	protein from Bos taurus	1.8e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein	protein from Canis lupus familiaris	1.8e-07
BLAST match view associations BLAST with ssb ssb ssb Single-stranded DNA-binding protein	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.9e-07
BLAST match view associations BLAST with VC_0397 VC_0397 VC_0397 single-strand binding protein	protein from Vibrio cholerae O1 biovar El Tor	1.9e-07
BLAST match view associations BLAST with NSE_0759 NSE_0759 NSE_0759 single-strand binding protein	protein from Neorickettsia sennetsu str. Miyayama	2.3e-07
BLAST match view associations BLAST with Ssbp1 Ssbp1 Ssbp1 single-stranded DNA binding protein 1	protein from Mus musculus	2.3e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Homo sapiens	2.9e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein	protein from Gallus gallus	3.8e-07
BLAST match view associations BLAST with SO_4028 SO_4028 SO_4028 single-strand binding protein	protein from Shewanella oneidensis MR-1	3.9e-07
BLAST match view associations BLAST with Ssbp1 Ssbp1 Ssbp1 single-stranded DNA binding protein 1, mitochondrial	gene from Rattus norvegicus	6.1e-07
BLAST match view associations BLAST with Ssbp1 Ssbp1 Ssbp1 Single-stranded DNA-binding protein, mitochondrial	protein from Rattus norvegicus	6.1e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Bos taurus	1.0e-06
BLAST match view associations BLAST with ssbp1-a ssbp1-a ssbp1-a Single-stranded DNA-binding protein 1-A, mitochondrial	protein from Xenopus laevis	1.7e-06
BLAST match view associations BLAST with SPO_1637 SPO_1637 SPO_1637 single-strand binding protein	protein from Ruegeria pomeroyi DSS-3	6.5e-06
BLAST match view associations BLAST with ssbp1-b ssbp1-b ssbp1-b Single-stranded DNA-binding protein 1-B, mitochondrial	protein from Xenopus laevis	3.4e-05

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028045
        (214 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2136083 - symbol:MTSSB "mitochondrially target...   665  2.5e-65   1
TAIR|locus:2086889 - symbol:AT3G18580 species:3702 "Arabi...   233  1.5e-19   1
UNIPROTKB|P0AGE0 - symbol:ssb "ssDNA-binding protein" spe...   137  2.2e-09   1
TIGR_CMR|ECH_0815 - symbol:ECH_0815 "single-strand bindin...   129  1.6e-08   1
TIGR_CMR|CBU_0271 - symbol:CBU_0271 "single-strand bindin...   128  2.0e-08   1
ZFIN|ZDB-GENE-050417-340 - symbol:ssbp1 "single-stranded ...   126  3.3e-08   1
UNIPROTKB|Q5RDQ0 - symbol:SSBP1 "Single-stranded DNA-bind...   121  1.1e-07   1
UNIPROTKB|Q95KK4 - symbol:SSBP1 "Single-stranded DNA-bind...   121  1.1e-07   1
GENEDB_PFALCIPARUM|PFE0435c - symbol:PFE0435c "single-str...   132  1.2e-07   1
UNIPROTKB|Q8I415 - symbol:PFE0435c "Single-strand binding...   132  1.2e-07   1
UNIPROTKB|E7EUY5 - symbol:SSBP1 "Single-stranded DNA-bind...   120  1.4e-07   1
UNIPROTKB|Q04837 - symbol:SSBP1 "Single-stranded DNA-bind...   120  1.4e-07   1
UNIPROTKB|F1SRQ7 - symbol:SSBP1 "Single-stranded DNA-bind...   120  1.4e-07   1
TIGR_CMR|APH_0465 - symbol:APH_0465 "single-strand bindin...   120  1.4e-07   1
UNIPROTKB|F1N1S0 - symbol:SSBP1 "Single-stranded DNA-bind...   119  1.8e-07   1
UNIPROTKB|E2RST4 - symbol:SSBP1 "Single-stranded DNA-bind...   119  1.8e-07   1
UNIPROTKB|Q9KUW2 - symbol:ssb "Single-stranded DNA-bindin...   124  1.9e-07   1
TIGR_CMR|VC_0397 - symbol:VC_0397 "single-strand binding ...   124  1.9e-07   1
TIGR_CMR|NSE_0759 - symbol:NSE_0759 "single-strand bindin...   118  2.3e-07   1
MGI|MGI:1920040 - symbol:Ssbp1 "single-stranded DNA bindi...   118  2.3e-07   1
UNIPROTKB|C9K0U8 - symbol:SSBP1 "Single-stranded DNA-bind...   117  2.9e-07   1
UNIPROTKB|E1BTE0 - symbol:SSBP1 "Single-stranded DNA-bind...   116  3.8e-07   1
TIGR_CMR|SO_4028 - symbol:SO_4028 "single-strand binding ...   128  3.9e-07   1
RGD|3760 - symbol:Ssbp1 "single-stranded DNA binding prot...   114  6.1e-07   1
UNIPROTKB|P28042 - symbol:Ssbp1 "Single-stranded DNA-bind...   114  6.1e-07   1
UNIPROTKB|Q32PB0 - symbol:SSBP1 "Single-stranded DNA-bind...   112  1.0e-06   1
UNIPROTKB|P09380 - symbol:ssbp1-a "Single-stranded DNA-bi...   110  1.7e-06   1
TIGR_CMR|SPO_1637 - symbol:SPO_1637 "single-strand bindin...   116  6.5e-06   1
UNIPROTKB|P09381 - symbol:ssbp1-b "Single-stranded DNA-bi...   105  3.4e-05   1


>TAIR|locus:2136083 [details] [associations]
            symbol:MTSSB "mitochondrially targeted single-stranded
            DNA binding protein" species:3702 "Arabidopsis thaliana"
            [GO:0003697 "single-stranded DNA binding" evidence=IEA;ISS]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0019243
            "methylglyoxal catabolic process to D-lactate" evidence=RCA]
            InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0005739 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0006260 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AF080120
            EMBL:AL049876 EMBL:AL161518 PANTHER:PTHR10302 EMBL:BT004166
            EMBL:BT005015 IPI:IPI00534596 PIR:T08185 RefSeq:NP_192844.2
            UniGene:At.33588 ProteinModelPortal:Q84J78 SMR:Q84J78 PaxDb:Q84J78
            PRIDE:Q84J78 EnsemblPlants:AT4G11060.1 GeneID:826707
            KEGG:ath:AT4G11060 GeneFarm:4154 TAIR:At4g11060 eggNOG:NOG329313
            HOGENOM:HOG000238117 InParanoid:Q84J78 OMA:AQWHRIA PhylomeDB:Q84J78
            ProtClustDB:CLSN2690856 Genevestigator:Q84J78 GermOnline:AT4G11060
            Uniprot:Q84J78
        Length = 201

 Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
 Identities = 130/214 (60%), Positives = 158/214 (73%)

Query:     1 MSSLAARFANLLRVPAXXXXXXXXLVLGVQRSSKMWYSSGSFDGXXXXXXXXXXXXXXXX 60
             M+SLA R + +LR           L +  +R SK W+S+G  D                 
Sbjct:     1 MNSLAIRVSKVLR-----SSSISPLAISAERGSKSWFSTGPID--------EGVEEDFEE 47

Query:    61 XXXXXXELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
                   ELQP GVDPR+GWGFRGVH+AIICGKV   P+QKILRNG+TVTIF+VGTGG+FD
Sbjct:    48 NVTERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFD 107

Query:   121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
             QR+VG+ + PKP QWHRIAVHNE+LGSYAV++L KNSSVYVEGDIE RVYNDSI+ EVK+
Sbjct:   108 QRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKS 167

Query:   181 IPEICIRRDGTLRLVKSGESISKISFDDLREGLL 214
             IPEIC+RRDG +R++K GESISKISFD+L+EGL+
Sbjct:   168 IPEICVRRDGKIRMIKYGESISKISFDELKEGLI 201


>TAIR|locus:2086889 [details] [associations]
            symbol:AT3G18580 species:3702 "Arabidopsis thaliana"
            [GO:0003697 "single-stranded DNA binding" evidence=IEA;ISS]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006260
            GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            EMBL:AP001303 PANTHER:PTHR10302 KO:K03111 HOGENOM:HOG000238117
            IPI:IPI00539604 RefSeq:NP_188488.1 UniGene:At.53373
            ProteinModelPortal:Q9LII1 SMR:Q9LII1 PaxDb:Q9LII1 PRIDE:Q9LII1
            EnsemblPlants:AT3G18580.1 GeneID:821389 KEGG:ath:AT3G18580
            TAIR:At3g18580 eggNOG:NOG325004 InParanoid:Q9LII1 OMA:DREEPHQ
            PhylomeDB:Q9LII1 ProtClustDB:CLSN2684390 Genevestigator:Q9LII1
            Uniprot:Q9LII1
        Length = 217

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 51/135 (37%), Positives = 86/135 (63%)

Query:    83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKP------VQWH 136
             G+ KAI+ G+V   P+QK L++G+TVT+FSVGTGG+ + R     + P+       VQWH
Sbjct:    79 GIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWH 138

Query:   137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG-TLRLV 195
             R++V+ E L    +K +   + +Y+EG++E +++ D + G V+ I E+ IRR+G  + L 
Sbjct:   139 RVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLG 198

Query:   196 KSGESISKISFDDLR 210
             K+G+ + + S  +LR
Sbjct:   199 KAGD-MQQPSSAELR 212


>UNIPROTKB|P0AGE0 [details] [associations]
            symbol:ssb "ssDNA-binding protein" species:83333
            "Escherichia coli K-12" [GO:0000725 "recombinational repair"
            evidence=TAS] [GO:0006298 "mismatch repair" evidence=TAS]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0003697
            "single-stranded DNA binding" evidence=IEA;IDA] [GO:0009432 "SOS
            response" evidence=TAS] UniProt:P0AGE0 InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR GO:GO:0006260 GO:GO:0006298 EMBL:U00006
            GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0009432 GO:GO:0000725 PDB:3SXU PDBsum:3SXU eggNOG:COG0629
            PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111 HOGENOM:HOG000106483
            EMBL:J01704 PIR:B65214 RefSeq:NP_418483.1 RefSeq:YP_492202.1
            PDB:1EQQ PDB:1EYG PDB:1KAW PDB:1QVC PDB:1SRU PDB:3UF7 PDBsum:1EQQ
            PDBsum:1EYG PDBsum:1KAW PDBsum:1QVC PDBsum:1SRU PDBsum:3UF7
            ProteinModelPortal:P0AGE0 SMR:P0AGE0 DIP:DIP-35980N IntAct:P0AGE0
            SWISS-2DPAGE:P0AGE0 PRIDE:P0AGE0 EnsemblBacteria:EBESCT00000004930
            EnsemblBacteria:EBESCT00000004931 EnsemblBacteria:EBESCT00000004932
            EnsemblBacteria:EBESCT00000018161 GeneID:12933677 GeneID:948570
            KEGG:ecj:Y75_p3946 KEGG:eco:b4059 PATRIC:32123663 EchoBASE:EB0969
            EcoGene:EG10976 OMA:SRPQQQS ProtClustDB:PRK09010
            BioCyc:EcoCyc:EG10976-MONOMER BioCyc:ECOL316407:JW4020-MONOMER
            EvolutionaryTrace:P0AGE0 Genevestigator:P0AGE0
        Length = 178

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 30/114 (26%), Positives = 59/114 (51%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
             RGV+K I+ G +   P  + + NG  V   ++ T   +  +  G  ++ +  +WHR+ + 
Sbjct:     4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61

Query:   142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGTLRLV 195
              + L   A + L K S VY+EG +  R + D  +G+ +   E+ +   GT++++
Sbjct:    62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQML 113


>TIGR_CMR|ECH_0815 [details] [associations]
            symbol:ECH_0815 "single-strand binding protein"
            species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003697
            "single-stranded DNA binding" evidence=ISS] [GO:0006260 "DNA
            replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
            [GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006260 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111
            HOGENOM:HOG000106483 RefSeq:YP_507611.1 ProteinModelPortal:Q2GG22
            SMR:Q2GG22 STRING:Q2GG22 GeneID:3926994 KEGG:ech:ECH_0815
            PATRIC:20577056 OMA:CARKGSK ProtClustDB:CLSK749103
            BioCyc:ECHA205920:GJNR-818-MONOMER Uniprot:Q2GG22
        Length = 157

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 27/93 (29%), Positives = 47/93 (50%)

Query:    83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
             GV+K I+ G +   P  ++++NGK +  FS+ T   +  +  G +   +  +WH + V N
Sbjct:     5 GVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMRT--EKTEWHNVVVFN 62

Query:   143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             E L       + K S +Y+EG +  R + D  N
Sbjct:    63 EGLVKIIKNCIRKGSKIYIEGSLRTRKWTDQNN 95


>TIGR_CMR|CBU_0271 [details] [associations]
            symbol:CBU_0271 "single-strand binding protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0003697
            "single-stranded DNA binding" evidence=ISS] [GO:0006260 "DNA
            replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
            [GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            GO:GO:0006260 GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR
            GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111
            RefSeq:NP_819315.1 PDB:3TQY PDBsum:3TQY ProteinModelPortal:Q83EP4
            SMR:Q83EP4 PRIDE:Q83EP4 GeneID:1208152 KEGG:cbu:CBU_0271
            PATRIC:17929233 HOGENOM:HOG000106483 OMA:KWQTKEG
            ProtClustDB:CLSK913941 BioCyc:CBUR227377:GJ7S-275-MONOMER
            Uniprot:Q83EP4
        Length = 158

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 35/106 (33%), Positives = 52/106 (49%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
             RGV+K I+ G +   P  +   NG  V   ++ T   +  +  G  +L +  +WHRIA  
Sbjct:     3 RGVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTG--ELQERTEWHRIAFF 60

Query:   142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
             N   EI+G Y    L K S +Y+EG +  R + D  NG  +   EI
Sbjct:    61 NRLAEIVGEY----LRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 101


>ZFIN|ZDB-GENE-050417-340 [details] [associations]
            symbol:ssbp1 "single-stranded DNA binding protein
            1" species:7955 "Danio rerio" [GO:0006260 "DNA replication"
            evidence=IEA] [GO:0003697 "single-stranded DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] InterPro:IPR000424 InterPro:IPR011344
            Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            ZFIN:ZDB-GENE-050417-340 GO:GO:0005739 GO:GO:0006260 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            PANTHER:PTHR10302 TIGRFAMs:TIGR00621 HOVERGEN:HBG001181 KO:K03111
            CTD:6742 EMBL:BC092875 IPI:IPI00570084 RefSeq:NP_001017806.1
            UniGene:Dr.17626 ProteinModelPortal:Q568F8 SMR:Q568F8 STRING:Q568F8
            PRIDE:Q568F8 GeneID:550504 KEGG:dre:550504 InParanoid:Q568F8
            NextBio:20879746 ArrayExpress:Q568F8 Bgee:Q568F8 Uniprot:Q568F8
        Length = 146

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 30/97 (30%), Positives = 50/97 (51%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             + ++K  I G+V   PV + +     VTIFS+ T  ++   +   VG+ D+ +   WHRI
Sbjct:    27 KSINKVQILGRVGQDPVMRQVEGRNPVTIFSMATNEMWRSGEGEPVGAGDVTQKTTWHRI 86

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S ++VEG ++   Y D  N
Sbjct:    87 SVFKPGLRDVAYQYVKKGSRIFVEGKLDYGEYVDKNN 123


>UNIPROTKB|Q5RDQ0 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein,
            mitochondrial" species:9601 "Pongo abelii" [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0042645 "mitochondrial nucleoid"
            evidence=ISS] InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260 GO:GO:0003682
            GO:GO:0042645 GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 GO:GO:0070584 GO:GO:0051096
            GeneTree:ENSGT00390000002796 PANTHER:PTHR10302 TIGRFAMs:TIGR00621
            HOVERGEN:HBG001181 KO:K03111 CTD:6742 HOGENOM:HOG000106484
            OrthoDB:EOG4KSPM4 OMA:ITYGEIT EMBL:CR857853 RefSeq:NP_001127238.1
            UniGene:Pab.19353 HSSP:Q04837 ProteinModelPortal:Q5RDQ0 SMR:Q5RDQ0
            PRIDE:Q5RDQ0 Ensembl:ENSPPYT00000021068 GeneID:100174293
            KEGG:pon:100174293 InParanoid:Q5RDQ0 Uniprot:Q5RDQ0
        Length = 148

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 29/97 (29%), Positives = 48/97 (49%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   D  +    D+ +   WHRI
Sbjct:    28 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDISQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S +Y+EG I+   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124


>UNIPROTKB|Q95KK4 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein,
            mitochondrial" species:9986 "Oryctolagus cuniculus" [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0042645 "mitochondrial
            nucleoid" evidence=ISS] InterPro:IPR000424 InterPro:IPR011344
            Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260
            GO:GO:0003682 GO:GO:0042645 GO:GO:0003697 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 CTD:6741 eggNOG:COG0629
            PANTHER:PTHR10302 TIGRFAMs:TIGR00621 HOVERGEN:HBG001181
            HOGENOM:HOG000106484 OrthoDB:EOG4KSPM4 HSSP:Q04837 EMBL:AJ311162
            RefSeq:NP_001075600.1 UniGene:Ocu.3243 ProteinModelPortal:Q95KK4
            SMR:Q95KK4 PRIDE:Q95KK4 GeneID:100008866 Uniprot:Q95KK4
        Length = 148

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 29/97 (29%), Positives = 47/97 (48%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   D       D+ +   WHRI
Sbjct:    28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNETYQMGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S +YVEG ++   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYMDKNN 124


>GENEDB_PFALCIPARUM|PFE0435c [details] [associations]
            symbol:PFE0435c "single-strand binding protein,
            putative" species:5833 "Plasmodium falciparum" [GO:0020011
            "apicoplast" evidence=ISS] InterPro:IPR000424 InterPro:IPR011344
            Pfam:PF00436 PROSITE:PS50935 GO:GO:0006260 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL844504
            GO:GO:0020011 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111
            HSSP:Q04837 RefSeq:XP_001351646.1 PDB:3ULP PDBsum:3ULP
            ProteinModelPortal:Q8I415 PRIDE:Q8I415
            EnsemblProtists:PFE0435c:mRNA GeneID:812855 KEGG:pfa:PFE0435c
            EuPathDB:PlasmoDB:PF3D7_0508800 HOGENOM:HOG000284108
            ProtClustDB:CLSZ2433225 Uniprot:Q8I415
        Length = 284

 Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 32/106 (30%), Positives = 54/106 (50%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
             + ++K ++ G+V   P  KIL  G  V  FS+ T   +  R   + +L     WHRI V+
Sbjct:    80 KSLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NTNELKSKTDWHRIVVY 137

Query:   142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYN-DSINGEVKNIPEICI 186
             ++ +     K L K   VYV+G +  R ++ + +N + K I EI +
Sbjct:   138 DQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIIL 183


>UNIPROTKB|Q8I415 [details] [associations]
            symbol:PFE0435c "Single-strand binding protein, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PROSITE:PS50935 GO:GO:0006260 GO:GO:0003697 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL844504 GO:GO:0020011
            PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111 HSSP:Q04837
            RefSeq:XP_001351646.1 PDB:3ULP PDBsum:3ULP
            ProteinModelPortal:Q8I415 PRIDE:Q8I415
            EnsemblProtists:PFE0435c:mRNA GeneID:812855 KEGG:pfa:PFE0435c
            EuPathDB:PlasmoDB:PF3D7_0508800 HOGENOM:HOG000284108
            ProtClustDB:CLSZ2433225 Uniprot:Q8I415
        Length = 284

 Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 32/106 (30%), Positives = 54/106 (50%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
             + ++K ++ G+V   P  KIL  G  V  FS+ T   +  R   + +L     WHRI V+
Sbjct:    80 KSLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NTNELKSKTDWHRIVVY 137

Query:   142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYN-DSINGEVKNIPEICI 186
             ++ +     K L K   VYV+G +  R ++ + +N + K I EI +
Sbjct:   138 DQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIIL 183


>UNIPROTKB|E7EUY5 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein"
            species:9606 "Homo sapiens" [GO:0003697 "single-stranded DNA
            binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0070584 "mitochondrion morphogenesis" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IDA] InterPro:IPR000424 InterPro:IPR011344
            Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0005739
            GO:GO:0006260 GO:GO:0003697 EMBL:AC004918 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0070584 PANTHER:PTHR10302
            TIGRFAMs:TIGR00621 HGNC:HGNC:11317 ChiTaRS:SSBP1 EMBL:AC004979
            IPI:IPI01014556 SMR:E7EUY5 Ensembl:ENST00000467681
            Ensembl:ENST00000576311 Uniprot:E7EUY5
        Length = 135

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 29/97 (29%), Positives = 48/97 (49%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   D  +    D+ +   WHRI
Sbjct:    28 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S +Y+EG I+   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124


>UNIPROTKB|Q04837 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein,
            mitochondrial" species:9606 "Homo sapiens" [GO:0003697
            "single-stranded DNA binding" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0070584 "mitochondrion
            morphogenesis" evidence=IEA] [GO:0051096 "positive regulation of
            helicase activity" evidence=IDA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0042645 "mitochondrial nucleoid" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] InterPro:IPR000424 InterPro:IPR011344
            Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260
            GO:GO:0003682 GO:GO:0042645 GO:GO:0003697 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0070584 GO:GO:0051096
            eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621
            HOVERGEN:HBG001181 KO:K03111 CTD:6742 OrthoDB:EOG4KSPM4 OMA:ITYGEIT
            EMBL:M94556 EMBL:AF277319 EMBL:BC000895 IPI:IPI00029744 PIR:JN0568
            RefSeq:NP_001243439.1 RefSeq:NP_001243440.1 RefSeq:NP_001243441.1
            RefSeq:NP_001243442.1 RefSeq:NP_003134.1 UniGene:Hs.490394 PDB:1S3O
            PDB:2DUD PDB:3ULL PDBsum:1S3O PDBsum:2DUD PDBsum:3ULL
            ProteinModelPortal:Q04837 SMR:Q04837 IntAct:Q04837
            MINT:MINT-3025472 STRING:Q04837 PhosphoSite:Q04837 DMDM:417811
            UCD-2DPAGE:Q04837 PaxDb:Q04837 PeptideAtlas:Q04837 PRIDE:Q04837
            DNASU:6742 Ensembl:ENST00000265304 Ensembl:ENST00000465582
            Ensembl:ENST00000481508 Ensembl:ENST00000484178
            Ensembl:ENST00000498107 GeneID:6742 KEGG:hsa:6742 UCSC:uc003vwo.1
            GeneCards:GC07P141440 HGNC:HGNC:11317 HPA:HPA002866 MIM:600439
            neXtProt:NX_Q04837 PharmGKB:PA36141 InParanoid:Q04837
            PhylomeDB:Q04837 ChiTaRS:SSBP1 EvolutionaryTrace:Q04837
            GenomeRNAi:6742 NextBio:26300 ArrayExpress:Q04837 Bgee:Q04837
            CleanEx:HS_SSBP1 Genevestigator:Q04837 GermOnline:ENSG00000106028
            Uniprot:Q04837
        Length = 148

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 29/97 (29%), Positives = 48/97 (49%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   D  +    D+ +   WHRI
Sbjct:    28 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S +Y+EG I+   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124


>UNIPROTKB|F1SRQ7 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein"
            species:9823 "Sus scrofa" [GO:0070584 "mitochondrion morphogenesis"
            evidence=IEA] [GO:0051096 "positive regulation of helicase
            activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0003697
            "single-stranded DNA binding" evidence=IEA] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            GO:GO:0006260 GO:GO:0003682 GO:GO:0042645 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0070584
            GO:GO:0051096 GeneTree:ENSGT00390000002796 PANTHER:PTHR10302
            TIGRFAMs:TIGR00621 KO:K03111 OMA:ITYGEIT EMBL:CU914341
            RefSeq:XP_003134650.1 Ensembl:ENSSSCT00000017952 GeneID:100512994
            KEGG:ssc:100512994 Uniprot:F1SRQ7
        Length = 148

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 29/97 (29%), Positives = 47/97 (48%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   +       D+ +   WHRI
Sbjct:    28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGENEAYQMGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S VYVEG ++   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRVYVEGKVDYGEYTDKNN 124


>TIGR_CMR|APH_0465 [details] [associations]
            symbol:APH_0465 "single-strand binding protein"
            species:212042 "Anaplasma phagocytophilum HZ" [GO:0003697
            "single-stranded DNA binding" evidence=ISS] [GO:0006260 "DNA
            replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
            [GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            GO:GO:0006260 GO:GO:0003697 EMBL:CP000235 GenomeReviews:CP000235_GR
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111
            HOGENOM:HOG000106483 OMA:CARKGSK RefSeq:YP_505066.1
            ProteinModelPortal:Q2GKN5 SMR:Q2GKN5 STRING:Q2GKN5 GeneID:3931215
            KEGG:aph:APH_0465 PATRIC:20949566 ProtClustDB:CLSK747308
            BioCyc:APHA212042:GHPM-492-MONOMER Uniprot:Q2GKN5
        Length = 159

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 29/95 (30%), Positives = 48/95 (50%)

Query:    83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
             GV+K I+ G +   P  ++++NGK +  FS+ T   +  +  GS+   +  +WH I V +
Sbjct:     5 GVNKVILIGYLGKDPDVRVMQNGKEMANFSLATSESWLDKASGSRT--EKTEWHNIVVFS 62

Query:   143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
             E L         K S VY+EG +  R + D  N +
Sbjct:    63 EGLVKVVKTCARKGSKVYLEGSLRTRKWVDQNNND 97


>UNIPROTKB|F1N1S0 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein"
            species:9913 "Bos taurus" [GO:0070584 "mitochondrion morphogenesis"
            evidence=IEA] [GO:0051096 "positive regulation of helicase
            activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0003697
            "single-stranded DNA binding" evidence=IEA] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            GO:GO:0006260 GO:GO:0003682 GO:GO:0042645 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0070584
            GO:GO:0051096 GeneTree:ENSGT00390000002796 PANTHER:PTHR10302
            TIGRFAMs:TIGR00621 IPI:IPI00695890 UniGene:Bt.65086 OMA:ITYGEIT
            EMBL:DAAA02011751 ProteinModelPortal:F1N1S0
            Ensembl:ENSBTAT00000014520 Uniprot:F1N1S0
        Length = 148

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 28/97 (28%), Positives = 47/97 (48%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   +       D+ +   WHRI
Sbjct:    28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGENETYQMGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S +YVEG ++   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNN 124


>UNIPROTKB|E2RST4 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein"
            species:9615 "Canis lupus familiaris" [GO:0070584 "mitochondrion
            morphogenesis" evidence=IEA] [GO:0051096 "positive regulation of
            helicase activity" evidence=IEA] [GO:0042645 "mitochondrial
            nucleoid" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA]
            InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260 GO:GO:0003682
            GO:GO:0042645 GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 GO:GO:0070584 GO:GO:0051096
            GeneTree:ENSGT00390000002796 PANTHER:PTHR10302 TIGRFAMs:TIGR00621
            KO:K03111 CTD:6742 OMA:ITYGEIT EMBL:AAEX03010199
            RefSeq:NP_001239208.1 RefSeq:XP_003639657.1 UniGene:Cfa.39495
            ProteinModelPortal:E2RST4 Ensembl:ENSCAFT00000006249
            GeneID:100855532 GeneID:475524 KEGG:cfa:100855532 KEGG:cfa:475524
            NextBio:20851350 Uniprot:E2RST4
        Length = 148

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 28/97 (28%), Positives = 47/97 (48%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   +       D+ +   WHRI
Sbjct:    28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGESETYQMGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S +YVEG ++   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNN 124


>UNIPROTKB|Q9KUW2 [details] [associations]
            symbol:ssb "Single-stranded DNA-binding protein"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0003697 "single-stranded DNA binding" evidence=ISS] [GO:0006260
            "DNA replication" evidence=ISS] [GO:0006281 "DNA repair"
            evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
            InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111
            ProtClustDB:PRK09010 OMA:NQRPPAQ EMBL:AF079406 PIR:B82326
            RefSeq:NP_230051.1 ProteinModelPortal:Q9KUW2 SMR:Q9KUW2
            DNASU:2614994 GeneID:2614994 KEGG:vch:VC0397 PATRIC:20079875
            Uniprot:Q9KUW2
        Length = 177

 Score = 124 (48.7 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 28/115 (24%), Positives = 61/115 (53%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
             RGV+K I+ G +   P  + + +G  V   ++ T   +  +  G +   +  +WHR+ ++
Sbjct:     4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61

Query:   142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR-DGTLRLV 195
              + L   A + L K S VY+EG ++ R + D  +G+ +   E+ ++  +G ++++
Sbjct:    62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114


>TIGR_CMR|VC_0397 [details] [associations]
            symbol:VC_0397 "single-strand binding protein" species:686
            "Vibrio cholerae O1 biovar El Tor" [GO:0003697 "single-stranded DNA
            binding" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
            [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
            recombination" evidence=ISS] InterPro:IPR000424 InterPro:IPR011344
            Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
            GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111
            ProtClustDB:PRK09010 OMA:NQRPPAQ EMBL:AF079406 PIR:B82326
            RefSeq:NP_230051.1 ProteinModelPortal:Q9KUW2 SMR:Q9KUW2
            DNASU:2614994 GeneID:2614994 KEGG:vch:VC0397 PATRIC:20079875
            Uniprot:Q9KUW2
        Length = 177

 Score = 124 (48.7 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 28/115 (24%), Positives = 61/115 (53%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
             RGV+K I+ G +   P  + + +G  V   ++ T   +  +  G +   +  +WHR+ ++
Sbjct:     4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61

Query:   142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR-DGTLRLV 195
              + L   A + L K S VY+EG ++ R + D  +G+ +   E+ ++  +G ++++
Sbjct:    62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114


>TIGR_CMR|NSE_0759 [details] [associations]
            symbol:NSE_0759 "single-strand binding protein"
            species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003697
            "single-stranded DNA binding" evidence=ISS] [GO:0006260 "DNA
            replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
            [GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            GO:GO:0006260 GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 EMBL:CP000237 GenomeReviews:CP000237_GR
            eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111
            HOGENOM:HOG000106483 RefSeq:YP_506634.1 ProteinModelPortal:Q2GD12
            SMR:Q2GD12 STRING:Q2GD12 GeneID:3931638 KEGG:nse:NSE_0759
            PATRIC:22681523 OMA:TAEIVEN ProtClustDB:CLSK2528123
            BioCyc:NSEN222891:GHFU-770-MONOMER Uniprot:Q2GD12
        Length = 151

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 29/123 (23%), Positives = 61/123 (49%)

Query:    84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
             ++K I+ G +   P  + + N K V  FS+ T   ++ +  G + + K  +WH++ V NE
Sbjct:     2 INKVILVGNLGKDPEVRTMSNAKQVATFSLATTENWNDKNTGER-VSK-TEWHQVVVFNE 59

Query:   144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGTLRLVKSGESISK 203
              L       + K + +Y+EG ++ R + D+ NG  +   E+ +    ++  + S +  S+
Sbjct:    60 PLIKVISNYVNKGTRLYIEGSLQTRKWTDN-NGIERYTTEVVLNPFNSVLKILSPQGSSE 118

Query:   204 ISF 206
               +
Sbjct:   119 THY 121


>MGI|MGI:1920040 [details] [associations]
            symbol:Ssbp1 "single-stranded DNA binding protein 1"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0006260 "DNA replication"
            evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=ISO]
            [GO:0051096 "positive regulation of helicase activity"
            evidence=ISO] [GO:0070584 "mitochondrion morphogenesis"
            evidence=IMP] InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PIRSF:PIRSF002070 PROSITE:PS50935 MGI:MGI:1920040 GO:GO:0006260
            GO:GO:0003682 GO:GO:0042645 GO:GO:0003697 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0070584 GO:GO:0051096
            eggNOG:COG0629 GeneTree:ENSGT00390000002796 PANTHER:PTHR10302
            TIGRFAMs:TIGR00621 HOVERGEN:HBG001181 KO:K03111 CTD:6742
            HOGENOM:HOG000106484 OMA:ITYGEIT EMBL:AK013425 IPI:IPI00111877
            RefSeq:NP_082634.1 RefSeq:NP_997633.1 UniGene:Mm.276356
            UniGene:Mm.393562 ProteinModelPortal:Q9CYR0 SMR:Q9CYR0
            STRING:Q9CYR0 PhosphoSite:Q9CYR0 PaxDb:Q9CYR0 PRIDE:Q9CYR0
            Ensembl:ENSMUST00000031971 GeneID:381760 KEGG:mmu:381760
            UCSC:uc009bmr.1 InParanoid:Q9CYR0 NextBio:402511 Bgee:Q9CYR0
            CleanEx:MM_SSBP1 Genevestigator:Q9CYR0
            GermOnline:ENSMUSG00000029911 Uniprot:Q9CYR0
        Length = 152

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   D  +    D+ +   WHRI
Sbjct:    28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDSEVYQMGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K + ++VEG ++   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNN 124


>UNIPROTKB|C9K0U8 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein"
            species:9606 "Homo sapiens" [GO:0003697 "single-stranded DNA
            binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0070584 "mitochondrion morphogenesis" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IDA] InterPro:IPR000424 InterPro:IPR011344
            Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0005739
            GO:GO:0006260 GO:GO:0003697 EMBL:AC004918 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0070584 PANTHER:PTHR10302
            TIGRFAMs:TIGR00621 HOGENOM:HOG000106484 HGNC:HGNC:11317
            ChiTaRS:SSBP1 EMBL:AC004979 IPI:IPI00947310 SMR:C9K0U8
            STRING:C9K0U8 Ensembl:ENST00000463093 Ensembl:ENST00000571709
            Uniprot:C9K0U8
        Length = 121

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 28/94 (29%), Positives = 47/94 (50%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   D  +    D+ +   WHRI
Sbjct:    28 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
             +V    L   A + + K S +Y+EG I+   Y D
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMD 121


>UNIPROTKB|E1BTE0 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein"
            species:9031 "Gallus gallus" [GO:0003697 "single-stranded DNA
            binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
            "mitochondrial nucleoid" evidence=IEA] [GO:0051096 "positive
            regulation of helicase activity" evidence=IEA] [GO:0070584
            "mitochondrion morphogenesis" evidence=IEA] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            GO:GO:0006260 GO:GO:0003682 GO:GO:0042645 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0051096
            GeneTree:ENSGT00390000002796 PANTHER:PTHR10302 TIGRFAMs:TIGR00621
            KO:K03111 CTD:6742 OMA:ITYGEIT EMBL:AADN02006380 IPI:IPI00593118
            RefSeq:XP_416355.1 UniGene:Gga.2863 ProteinModelPortal:E1BTE0
            PRIDE:E1BTE0 Ensembl:ENSGALT00000021003 GeneID:418122
            KEGG:gga:418122 NextBio:20821329 Uniprot:E1BTE0
        Length = 149

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 26/97 (26%), Positives = 48/97 (49%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   P+ + +     VTIFS+ T  ++   +  +  + D+ +   WHRI
Sbjct:    29 RSMNRVQLLGRVGQDPIMRQVDGKNPVTIFSLATNEMWRTGETEVAQTGDISQKTTWHRI 88

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L     + + K S +YVEG ++   Y D  N
Sbjct:    89 SVFRPGLRDVTYQYVKKGSRLYVEGKLDYGEYTDKNN 125


>TIGR_CMR|SO_4028 [details] [associations]
            symbol:SO_4028 "single-strand binding protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003697
            "single-stranded DNA binding" evidence=ISS] [GO:0006260 "DNA
            replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
            [GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PROSITE:PS50935 GO:GO:0006260
            GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111
            HOGENOM:HOG000106483 RefSeq:NP_719558.1 ProteinModelPortal:Q8EA81
            SMR:Q8EA81 GeneID:1171655 KEGG:son:SO_4028 PATRIC:23527722
            OMA:NQRPPAQ ProtClustDB:CLSK907458 Uniprot:Q8EA81
        Length = 238

 Score = 128 (50.1 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 36/120 (30%), Positives = 63/120 (52%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF-DQRIVGSKDLPKPVQWHRIAV 140
             RGV+K I+ G +   P  + + NG  V   +V T   + DQ+  G +   +  +WHR+ +
Sbjct:     4 RGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQ--GQQQ--ERTEWHRVVL 59

Query:   141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGTLRLVKS 197
                  EI G Y    L K S VY+EG ++ R + D  +G+ +   E+ I + G+++++ S
Sbjct:    60 FGKLAEITGEY----LRKGSQVYLEGKLQTRKWKDQ-SGQDRYSTEVVIDQSGSMQMLGS 114


>RGD|3760 [details] [associations]
            symbol:Ssbp1 "single-stranded DNA binding protein 1, mitochondrial"
          species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
          evidence=IEA;ISO] [GO:0003697 "single-stranded DNA binding"
          evidence=IEA;NAS] [GO:0005739 "mitochondrion" evidence=ISO;NAS]
          [GO:0006260 "DNA replication" evidence=IEA] [GO:0042645
          "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0051096 "positive
          regulation of helicase activity" evidence=IEA;ISO] [GO:0070584
          "mitochondrion morphogenesis" evidence=IEA;ISO] InterPro:IPR000424
          InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
          RGD:3760 GO:GO:0005739 GO:GO:0006260 GO:GO:0003697 Gene3D:2.40.50.140
          InterPro:IPR012340 SUPFAM:SSF50249 eggNOG:COG0629 PANTHER:PTHR10302
          TIGRFAMs:TIGR00621 HOVERGEN:HBG001181 KO:K03111 CTD:6742
          HOGENOM:HOG000106484 OrthoDB:EOG4KSPM4 EMBL:M94557 EMBL:AF043635
          EMBL:AF043630 EMBL:AF043631 EMBL:AF043632 EMBL:AF043633 EMBL:AF043634
          IPI:IPI00196750 PIR:JN0569 RefSeq:NP_899157.1 UniGene:Rn.106922
          ProteinModelPortal:P28042 SMR:P28042 IntAct:P28042 STRING:P28042
          PRIDE:P28042 GeneID:54304 KEGG:rno:54304 UCSC:RGD:3760
          InParanoid:P28042 NextBio:610960 ArrayExpress:P28042
          Genevestigator:P28042 GermOnline:ENSRNOG00000012100 Uniprot:P28042
        Length = 151

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 27/97 (27%), Positives = 47/97 (48%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   D       D+ +   WHRI
Sbjct:    28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNEAYQMGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K + ++VEG ++   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNN 124


>UNIPROTKB|P28042 [details] [associations]
            symbol:Ssbp1 "Single-stranded DNA-binding protein,
            mitochondrial" species:10116 "Rattus norvegicus" [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0042645 "mitochondrial
            nucleoid" evidence=IEA] [GO:0051096 "positive regulation of
            helicase activity" evidence=IEA] [GO:0070584 "mitochondrion
            morphogenesis" evidence=IEA] InterPro:IPR000424 InterPro:IPR011344
            Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935 RGD:3760
            GO:GO:0005739 GO:GO:0006260 GO:GO:0003697 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 eggNOG:COG0629 PANTHER:PTHR10302
            TIGRFAMs:TIGR00621 HOVERGEN:HBG001181 KO:K03111 CTD:6742
            HOGENOM:HOG000106484 OrthoDB:EOG4KSPM4 EMBL:M94557 EMBL:AF043635
            EMBL:AF043630 EMBL:AF043631 EMBL:AF043632 EMBL:AF043633
            EMBL:AF043634 IPI:IPI00196750 PIR:JN0569 RefSeq:NP_899157.1
            UniGene:Rn.106922 ProteinModelPortal:P28042 SMR:P28042
            IntAct:P28042 STRING:P28042 PRIDE:P28042 GeneID:54304
            KEGG:rno:54304 UCSC:RGD:3760 InParanoid:P28042 NextBio:610960
            ArrayExpress:P28042 Genevestigator:P28042
            GermOnline:ENSRNOG00000012100 Uniprot:P28042
        Length = 151

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 27/97 (27%), Positives = 47/97 (48%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +     VTIFS+ T  ++   D       D+ +   WHRI
Sbjct:    28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNEAYQMGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K + ++VEG ++   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNN 124


>UNIPROTKB|Q32PB0 [details] [associations]
            symbol:SSBP1 "Single-stranded DNA-binding protein,
            mitochondrial" species:9913 "Bos taurus" [GO:0042645 "mitochondrial
            nucleoid" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA]
            InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260 GO:GO:0003682
            GO:GO:0042645 GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 eggNOG:COG0629 PANTHER:PTHR10302 TIGRFAMs:TIGR00621
            HOVERGEN:HBG001181 KO:K03111 EMBL:BC108189 IPI:IPI00695890
            RefSeq:NP_001032543.1 UniGene:Bt.65086 HSSP:P0AGE0
            ProteinModelPortal:Q32PB0 SMR:Q32PB0 STRING:Q32PB0 PRIDE:Q32PB0
            GeneID:515765 KEGG:bta:515765 CTD:6742 HOGENOM:HOG000106484
            InParanoid:Q32PB0 OrthoDB:EOG4KSPM4 NextBio:20871993 Uniprot:Q32PB0
        Length = 148

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 27/97 (27%), Positives = 46/97 (47%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
             R +++  + G+V   PV + +      TIFS+ T  ++   +       D+ +   WHRI
Sbjct:    28 RSLNRVQLLGRVGQDPVMRQVEGKNPDTIFSLATNEMWRSGENETYQMGDVSQKTTWHRI 87

Query:   139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             +V    L   A + + K S +YVEG ++   Y D  N
Sbjct:    88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNN 124


>UNIPROTKB|P09380 [details] [associations]
            symbol:ssbp1-a "Single-stranded DNA-binding protein 1-A,
            mitochondrial" species:8355 "Xenopus laevis" [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0042645 "mitochondrial nucleoid"
            evidence=ISS] InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260 GO:GO:0003682
            GO:GO:0042645 GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 PANTHER:PTHR10302 TIGRFAMs:TIGR00621 EMBL:X59285
            EMBL:X83673 EMBL:BC082205 PIR:JC6173 RefSeq:NP_001095241.1
            UniGene:Xl.35184 ProteinModelPortal:P09380 SMR:P09380 GeneID:397915
            KEGG:xla:397915 CTD:397915 Xenbase:XB-GENE-6252172
            HOVERGEN:HBG001181 Uniprot:P09380
        Length = 146

 Score = 110 (43.8 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 29/98 (29%), Positives = 46/98 (46%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF----DQRIVGSKDLPKPVQWHR 137
             R ++K  + G+V   PV +       VTIFS+ T  L+     +    + D+ +   WHR
Sbjct:    26 RSINKVQLLGRVGQDPVMRQAEGKNPVTIFSLATNELWRSGESETFHTAGDVNQKTTWHR 85

Query:   138 IAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             I+V    L   A + + K + + VEG I+   Y D  N
Sbjct:    86 ISVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTDKNN 123


>TIGR_CMR|SPO_1637 [details] [associations]
            symbol:SPO_1637 "single-strand binding protein"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003697
            "single-stranded DNA binding" evidence=ISS] [GO:0006260 "DNA
            replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
            [GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000424
            InterPro:IPR011344 Pfam:PF00436 PIRSF:PIRSF002070 PROSITE:PS50935
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006260 GO:GO:0003697
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            PANTHER:PTHR10302 TIGRFAMs:TIGR00621 KO:K03111 HOGENOM:HOG000106483
            OMA:IATSENW RefSeq:YP_166878.1 ProteinModelPortal:Q5LSX7 SMR:Q5LSX7
            GeneID:3193067 KEGG:sil:SPO1637 PATRIC:23376599
            ProtClustDB:CLSK751564 Uniprot:Q5LSX7
        Length = 180

 Score = 116 (45.9 bits), Expect = 6.5e-06, P = 6.5e-06
 Identities = 30/115 (26%), Positives = 56/115 (48%)

Query:    84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
             V+K I+ G +   P  +  +NG  V    + T   +  R  G +   +  +WH +A+ +E
Sbjct:     5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGERR--ERTEWHSVAIFSE 62

Query:   144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGTLRLVKSG 198
              L   A + L K S VY+EG ++ R + D  +G+ +   E+ ++  G   ++  G
Sbjct:    63 GLVRVAEQYLRKGSKVYLEGQLQTRKWQDQ-SGQDRYSTEVVLQGFGATLVMLDG 116


>UNIPROTKB|P09381 [details] [associations]
            symbol:ssbp1-b "Single-stranded DNA-binding protein 1-B,
            mitochondrial" species:8355 "Xenopus laevis" [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0042645 "mitochondrial nucleoid"
            evidence=ISS] InterPro:IPR000424 InterPro:IPR011344 Pfam:PF00436
            PIRSF:PIRSF002070 PROSITE:PS50935 GO:GO:0006260 GO:GO:0003682
            GO:GO:0042645 GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 PANTHER:PTHR10302 TIGRFAMs:TIGR00621
            HOVERGEN:HBG001181 EMBL:X83674 EMBL:BC133265 PIR:JC6172
            RefSeq:NP_001091326.1 UniGene:Xl.75198 ProteinModelPortal:P09381
            SMR:P09381 GeneID:100037159 KEGG:xla:100037159 CTD:100037159
            Xenbase:XB-GENE-979715 KO:K03111 Uniprot:P09381
        Length = 148

 Score = 105 (42.0 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 28/98 (28%), Positives = 47/98 (47%)

Query:    82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF----DQRIVGSKDLPKPVQWHR 137
             R ++K  + G+V   PV +       VTIFS+ T  L+    ++    + D+ +   WHR
Sbjct:    28 RSMNKVQLLGRVGQDPVMRQADGKNPVTIFSLATNELWRSGENEVFQPAGDVNQKTTWHR 87

Query:   138 IAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
             ++V    L   A + + K + + VEG I+   Y D  N
Sbjct:    88 VSVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTDKNN 125


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.139   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       184   0.00078  110 3  11 22  0.44    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  29
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.59u 0.10s 15.69t   Elapsed:  00:00:01
  Total cpu time:  15.59u 0.10s 15.69t   Elapsed:  00:00:01
  Start:  Fri May 10 00:05:51 2013   End:  Fri May 10 00:05:52 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with MTSSB MTSSB MTSSB AT4G11060	protein from Arabidopsis thaliana	2.5e-65
BLAST match view associations BLAST with AT3G18580 AT3G18580 AT3G18580	protein from Arabidopsis thaliana	1.5e-19
BLAST match view associations BLAST with ssb ssb ssb ssDNA-binding protein	protein from Escherichia coli K-12	2.2e-09
BLAST match view associations BLAST with ECH_0815 ECH_0815 ECH_0815 single-strand binding protein	protein from Ehrlichia chaffeensis str. Arkansas	1.6e-08
BLAST match view associations BLAST with CBU_0271 CBU_0271 CBU_0271 single-strand binding protein	protein from Coxiella burnetii RSA 493	2.0e-08
BLAST match view associations BLAST with ssbp1 ssbp1 ssbp1 single-stranded DNA binding protein 1	gene_product from Danio rerio	3.3e-08
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Pongo abelii	1.1e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Oryctolagus cuniculus	1.1e-07
BLAST match view associations BLAST with PFE0435c PFE0435c PFE0435c single-strand binding protein, putative	gene from Plasmodium falciparum	1.2e-07
BLAST match view associations BLAST with PFE0435c PFE0435c PFE0435c Single-strand binding protein, putative	protein from Plasmodium falciparum 3D7	1.2e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Homo sapiens	1.4e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Homo sapiens	1.4e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein	protein from Sus scrofa	1.4e-07
BLAST match view associations BLAST with APH_0465 APH_0465 APH_0465 single-strand binding protein	protein from Anaplasma phagocytophilum HZ	1.4e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein	protein from Bos taurus	1.8e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein	protein from Canis lupus familiaris	1.8e-07
BLAST match view associations BLAST with ssb ssb ssb Single-stranded DNA-binding protein	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.9e-07
BLAST match view associations BLAST with VC_0397 VC_0397 VC_0397 single-strand binding protein	protein from Vibrio cholerae O1 biovar El Tor	1.9e-07
BLAST match view associations BLAST with NSE_0759 NSE_0759 NSE_0759 single-strand binding protein	protein from Neorickettsia sennetsu str. Miyayama	2.3e-07
BLAST match view associations BLAST with Ssbp1 Ssbp1 Ssbp1 single-stranded DNA binding protein 1	protein from Mus musculus	2.3e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Homo sapiens	2.9e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein	protein from Gallus gallus	3.8e-07
BLAST match view associations BLAST with SO_4028 SO_4028 SO_4028 single-strand binding protein	protein from Shewanella oneidensis MR-1	3.9e-07
BLAST match view associations BLAST with Ssbp1 Ssbp1 Ssbp1 single-stranded DNA binding protein 1, mitochondrial	gene from Rattus norvegicus	6.1e-07
BLAST match view associations BLAST with Ssbp1 Ssbp1 Ssbp1 Single-stranded DNA-binding protein, mitochondrial	protein from Rattus norvegicus	6.1e-07
BLAST match view associations BLAST with SSBP1 SSBP1 SSBP1 Single-stranded DNA-binding protein, mitochondrial	protein from Bos taurus	1.0e-06
BLAST match view associations BLAST with ssbp1-a ssbp1-a ssbp1-a Single-stranded DNA-binding protein 1-A, mitochondrial	protein from Xenopus laevis	1.7e-06
BLAST match view associations BLAST with SPO_1637 SPO_1637 SPO_1637 single-strand binding protein	protein from Ruegeria pomeroyi DSS-3	6.5e-06
BLAST match view associations BLAST with ssbp1-b ssbp1-b ssbp1-b Single-stranded DNA-binding protein 1-B, mitochondrial	protein from Xenopus laevis	3.4e-05