BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028047
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 156 IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYFS 214
IP+ +LC +C +AF PCGH+V C +CA SV KCP+CR MR+YFS
Sbjct: 385 IPEEKLCKICYGAEYNTAFLPCGHVVACAKCASSVT-----KCPLCRKPFTDVMRVYFS 438
>sp|P41436|IAP_GVCPM Apoptosis inhibitor IAP OS=Cydia pomonella granulosis virus
(isolate Mexico/1963) GN=IAP PE=4 SV=1
Length = 275
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 156 IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYFS 214
+ D +LC +C I F PCGH+V C +CA+SV+ KCP+CR V S +++YFS
Sbjct: 222 VEDSKLCKICYVEECIVCFVPCGHVVACAKCALSVD-----KCPMCRKIVTSVLKVYFS 275
>sp|Q6NTT6|MUL1_XENLA Mitochondrial ubiquitin ligase activator of nfkb 1 OS=Xenopus
laevis GN=mul1 PE=2 SV=1
Length = 353
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 8 LPLTTAYQRLELANVSPFTFLQAMFGLKCPIGVLAEEKILPLGKDISAVGICSFKNGIPE 67
L L T Y++ A S L + P GV E++L +G I+ VG N +
Sbjct: 151 LGLETIYEKFHPAVQSFSNILGHYMTGERPKGVQETEEMLKIGATITGVGELVLDNKTIK 210
Query: 68 IKSCKD--LPYFLSEKTKDLMVVDLVNRSKILFWS--GIVLGSLSIGILGYAIVRNWNRW 123
++ KD L Y S + L+ V ++ +W IV G S L + + R + +
Sbjct: 211 LQPPKDGMLFYLSSMDYEGLLEKQEV---QMRWWRILSIVFGVASCITLFFILRRKYRHY 267
Query: 124 KDRQQ--RMSRQLTEAPSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLV 181
K++Q + R+ E+ + Q +++ + C +CL+ + F CGH+
Sbjct: 268 KEKQHLKNLQREFEESRARQRVQQEPQNKEEVQNP-----CSICLSTEKSCVFLECGHVC 322
Query: 182 CCRRCAISVEREASP-KCPVCRMTVRSSMRIYFS 214
C C ++ SP KCP+CR + + +Y S
Sbjct: 323 SCISCYQAL---PSPKKCPICRNFIDRIVPLYNS 353
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 10/210 (4%)
Query: 8 LPLTTAYQRLELANVSPFTFLQAMFGLKCPIGVLAEEKILPLGKDISAVGICSFKNGIPE 67
L L T Y++ + S + + P G+ E++L +G ++ VG N
Sbjct: 150 LGLETVYEKFHPSIQSFTDVIGHYISGERPKGIQETEEMLKVGATLTGVGELVLDNNSVR 209
Query: 68 IKSCKD-LPYFLSEKTKDLMVVDLVNRSKILFWS--GIVLGSLSIGILGYAIVRNWNRWK 124
++ K + Y+LS + D ++ S + W +V G + L + I+R ++
Sbjct: 210 LQPPKQGMQYYLSSQDFDSLLQR--QESSVRLWKVLALVFGFATCATL-FFILRK--QYL 264
Query: 125 DRQQRMSRQLTEAPSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCR 184
RQ+R+ + + + ++Q+ S CVVCL+ + F CGH+ C
Sbjct: 265 QRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSACVVCLSSFKSCVFLECGHVCSCT 324
Query: 185 RCAISVEREASPKCPVCRMTVRSSMRIYFS 214
C ++ KCP+CR + + +Y S
Sbjct: 325 ECYRALPE--PKKCPICRQAITRVIPLYNS 352
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 37 PIGVLAEEKILPLGKDISAVGICSFKNGIPEIKSCKD-LPYFLSEKTKDLMVVDLVNRSK 95
P G+ E++L +G ++ VG N ++ K + Y+LS + D ++ S
Sbjct: 179 PKGIQETEEMLKVGATLTGVGELVLDNNSVRLQPPKQGMQYYLSSQDFDSLLQR--QESS 236
Query: 96 ILFWS--GIVLGSLSIGILGYAIVRNWNRWKDRQQRMSRQLTEAPSDDADSQIGSDEDVA 153
+ W +V G + L + I+R ++ RQ+R+ + + + ++Q+ S
Sbjct: 237 VRLWKVLALVFGFATCATL-FFILRK--QYLQRQERLRLKQMQEEFQEHEAQLLSRAKPE 293
Query: 154 GDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYF 213
CVVCL+ + F CGH+ C C ++ KCP+CR + + +Y
Sbjct: 294 DRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALPE--PKKCPICRQAITRVIPLYN 351
Query: 214 S 214
S
Sbjct: 352 S 352
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 121 NRWKDRQQRMSRQLTEAPSDDADSQIGSDEDVAGDIPDGQL--------CVVCLTRRRIS 172
N +K+ + + L E + + + EDV+G + QL C VC+ R
Sbjct: 516 NIFKNSLKEIDSTLYENLFVEKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDREVSI 575
Query: 173 AFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYFS 214
F PCGHLV C+ CA S+ KCP+CR T++ ++R + S
Sbjct: 576 VFIPCGHLVVCQECAPSLR-----KCPICRGTIKGTVRTFLS 612
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 158 DGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYFS 214
+ + C VC+ + F PCGHLV CR CA S+ KCP+CR TVR ++R + S
Sbjct: 553 EERTCKVCMDKEVSIVFIPCGHLVVCRDCAPSLR-----KCPICRGTVRGTVRTFLS 604
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 150 EDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSM 209
E+ + + ++C VC+ R F PCGHLV C+ CA S+ KCP+CR T++ ++
Sbjct: 541 EEQLRKLQEERMCKVCMDREVSIVFIPCGHLVVCKDCAPSLR-----KCPICRGTIKGTV 595
Query: 210 RIYFS 214
R + S
Sbjct: 596 RTFLS 600
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 13/73 (17%)
Query: 150 EDVAGDIPDGQL--------CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVC 201
EDV+G + QL C VC+ + F PCGHLV C+ CA S+ KCP+C
Sbjct: 544 EDVSGLPMEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKECAPSLR-----KCPIC 598
Query: 202 RMTVRSSMRIYFS 214
R T++ ++R + S
Sbjct: 599 RGTIKGTVRTFLS 611
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 148 SDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRS 207
S E+ + D +LC +C+ R F PCGHLV C++CA +V+R CP+C +
Sbjct: 175 SPEEPLRRLQDEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDR-----CPMCSAVIDF 229
Query: 208 SMRIYFS 214
R++ S
Sbjct: 230 KQRVFMS 236
>sp|Q60989|XIAP_MOUSE E3 ubiquitin-protein ligase XIAP OS=Mus musculus GN=Xiap PE=1 SV=2
Length = 496
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 139 SDDADSQIGSDEDVAGD-----IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVERE 193
++D SQ +D++ + + + +LC +C+ R F PCGHLV C++CA E
Sbjct: 421 TEDESSQTSLQKDISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCA-----E 475
Query: 194 ASPKCPVCRMTVRSSMRIYFS 214
A KCP+C + +I+ S
Sbjct: 476 AVDKCPMCYTVITFKQKIFMS 496
>sp|Q05A36|MEX3C_MOUSE RNA-binding E3 ubiquitin-protein ligase MEX3C OS=Mus musculus
GN=Mex3c PE=2 SV=2
Length = 652
Score = 50.8 bits (120), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
CV+C I+A PCGH + C CA + + +P CPVC+ V +++I+
Sbjct: 601 CVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQIH 651
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 148 SDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRS 207
S E+ + + +LC +C+ R F PCGHLV C++CA +V+R CP+C +
Sbjct: 175 SPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDR-----CPMCNAVIDF 229
Query: 208 SMRIYFS 214
R++ S
Sbjct: 230 KQRVFMS 236
>sp|P41437|IAP3_NPVOP E3 ubiquitin-protein ligase IAP-3 OS=Orgyia pseudotsugata
multicapsid polyhedrosis virus GN=IAP3 PE=1 SV=1
Length = 268
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 122 RWKDR---------QQRMSRQLTEA-PSDDADSQIGSDED-VAGDIPDGQLCVVCLTRRR 170
RW DR + + R +TEA DAD++ + V ++ D +LC +CL +
Sbjct: 170 RWYDRCEYVLLVKGRDFVQRVMTEACVVRDADNEPHIERPAVEAEVADDRLCKICLGAEK 229
Query: 171 ISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
F PCGH+V C +CA V CPVCR + ++R+Y
Sbjct: 230 TVCFVPCGHVVACGKCAAGVT-----TCPVCRGQLDKAVRMY 266
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 156 IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYFS 214
+ + + C VC+ + F PCGHLV C+ CA S+ KCP+CR T++ ++R + S
Sbjct: 551 LQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLR-----KCPICRSTIKGTVRTFLS 604
>sp|Q9R0I6|XIAP_RAT E3 ubiquitin-protein ligase XIAP OS=Rattus norvegicus GN=Xiap PE=2
SV=1
Length = 496
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 139 SDDADSQIGSDEDVAGD-----IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVERE 193
S D SQ +D++ + + + +LC +C+ R F PCGHLV C++CA E
Sbjct: 421 SQDESSQTSLQKDISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCA-----E 475
Query: 194 ASPKCPVCRMTVRSSMRIYFS 214
A KCP+C + +I+ S
Sbjct: 476 AVDKCPMCCTVITFKQKIFMS 496
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 148 SDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRS 207
S E+ + + +LC +C+ R F PCGHLV C++CA +V+R CP+C +
Sbjct: 175 SPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDR-----CPMCSAVIDF 229
Query: 208 SMRIYFS 214
R++ S
Sbjct: 230 KQRVFMS 236
>sp|Q5M7X9|MUL1A_DANRE Mitochondrial ubiquitin ligase activator of nfkb 1-A OS=Danio rerio
GN=mul1a PE=2 SV=1
Length = 341
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 9 PLTTAYQRLELANVSPFTFLQAMFGL----------KCPIGVLAEEKILPLGKDISAVG- 57
PL ++E+ + F QA +G + P G L E++L +G ++ VG
Sbjct: 138 PLEATGPKMEIVHEK---FHQATYGFTDLIGQYLSGEKPKGQLETEEMLKVGASLTVVGE 194
Query: 58 ICSFKNGIPEIKSCKD-LPYFLSEKTKDLMVVDLVNRSKILFWSGIVLGSLSIGILGYAI 116
+ + + +I+ D YFLS + ++++ ++++ + + +L +
Sbjct: 195 LILDTDRLLKIRPPTDGSEYFLSSADFETLLMEQEGQAEVWRVFACICALAGVAVLIWTG 254
Query: 117 VRNWNRWKDR--QQRMSRQLTEAPSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRISAF 174
R + + K R Q+ + R+ + + + G + CV+CL+ R
Sbjct: 255 RRYYRQLKLRWEQENLRREFEGMGTGEREEDNGVE----------NACVICLSNPRGCVL 304
Query: 175 NPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
CGH+ CC RC ++ P CP+CR ++ + +Y
Sbjct: 305 LDCGHVCCCFRCYQAL---PQPFCPICRQHIKRVVPLY 339
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 141 DADSQIGSDEDVAGDIPDGQL--------CVVCLTRRRISAFNPCGHLVCCRRCAISVER 192
D + + EDV+G + QL C VC+ + F PCGHLV C+ CA S+
Sbjct: 542 DKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR- 600
Query: 193 EASPKCPVCRMTVRSSMRIYFS 214
KCP+CR ++ ++R + S
Sbjct: 601 ----KCPICRGIIKGTVRTFLS 618
>sp|A1L020|MEX3A_HUMAN RNA-binding protein MEX3A OS=Homo sapiens GN=MEX3A PE=1 SV=1
Length = 520
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
C+VC +A PCGH + C CA+ + P+CPVC +T ++RI+
Sbjct: 469 CMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHITATQAIRIF 519
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 156 IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYFS 214
+ + + C VC+ + F PCGHLV C+ CA S+ KCP+CR T++ ++R + S
Sbjct: 305 LQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLR-----KCPICRGTIKGTVRTFLS 358
>sp|P98170|XIAP_HUMAN E3 ubiquitin-protein ligase XIAP OS=Homo sapiens GN=XIAP PE=1 SV=2
Length = 497
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 148 SDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRS 207
S E+ + + +LC +C+ R F PCGHLV C++CA EA KCP+C +
Sbjct: 436 STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCA-----EAVDKCPMCYTVITF 490
Query: 208 SMRIYFS 214
+I+ S
Sbjct: 491 KQKIFMS 497
>sp|Q6INH1|RN157_XENLA RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1
Length = 674
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 136 EAPSDDADSQIGSDEDVAGDIPDGQL-CVVCLTRRRISAFNPCGHLVCCRRCAISVEREA 194
E + DS++ DE + D CVVCL+ R + PC HL C CA ++ +A
Sbjct: 255 ENKYNSQDSKVAEDE-----LSDNSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQA 309
Query: 195 SPKCPVCRMTVRSSMRI 211
S CP+CR+ R+ ++I
Sbjct: 310 S-NCPICRLPFRALLQI 325
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 156 IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYF 213
+ + LC+VC S F PCGH VCC CA ++ CPVCR V +Y
Sbjct: 381 LKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQ-----SCPVCRSRVEHVQHVYL 433
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 161 LCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYF 213
LC++C +AF PCGH+VCC+ CA ++ CPVCR V +Y
Sbjct: 383 LCMLCCEEEIDAAFCPCGHMVCCQNCAAQLQ-----SCPVCRSEVEHVQHVYL 430
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 156 IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYF 213
+ + LC+VC S F PCGH VCC CA ++ CPVCR V +Y
Sbjct: 381 LKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQ-----SCPVCRSRVEHVQHVYL 433
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 150 EDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSM 209
E+ + D +LC VCL F PCGHL C +CA SV CP+CR ++ +
Sbjct: 439 EEENRQLKDARLCKVCLDEEVGVVFLPCGHLATCNQCAPSVA-----NCPMCRADIKGFV 493
Query: 210 RIYFS 214
R + S
Sbjct: 494 RTFLS 498
>sp|Q6ZN04|MEX3B_HUMAN RNA-binding protein MEX3B OS=Homo sapiens GN=MEX3B PE=1 SV=1
Length = 569
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
C VC I+A PCGH + C CA + ++ P+CPVC V ++RI+
Sbjct: 518 CSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIF 568
>sp|Q69Z36|MEX3B_MOUSE RNA-binding protein MEX3B OS=Mus musculus GN=Mex3b PE=2 SV=2
Length = 601
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
C VC I+A PCGH + C CA + ++ P+CPVC V ++RI+
Sbjct: 550 CSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIF 600
>sp|Q5U5Q3|MEX3C_HUMAN RNA-binding E3 ubiquitin-protein ligase MEX3C OS=Homo sapiens
GN=MEX3C PE=1 SV=3
Length = 659
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
CV+C I+A PCGH + C CA + + +P CPVC+ V +++I+
Sbjct: 608 CVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQIH 658
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 129 RMSRQLTEAPSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAI 188
RM R +E P + A S E+ + + ++C VC+ + F PCGHLV C CA
Sbjct: 325 RMER--SEPPKESAPPL--STEEQLRRLKEERMCKVCMDKDVSMLFVPCGHLVVCTECAP 380
Query: 189 SVEREASPKCPVCRMTVRSSMRIYFS 214
++ CP+CR +R S+R + S
Sbjct: 381 NLR-----HCPICRAAIRGSVRAFMS 401
>sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=1 SV=3
Length = 679
Score = 47.8 bits (112), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 136 EAPSDDADSQIGSDEDVAGDIPDGQL-CVVCLTRRRISAFNPCGHLVCCRRCAISVEREA 194
E + DS++ DE + D CVVCL+ R + PC HL C CA ++ +A
Sbjct: 255 ENKYNTQDSKVAEDE-----VSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQA 309
Query: 195 SPKCPVCRMTVRSSMRI 211
+ CP+CR+ R+ ++I
Sbjct: 310 N-NCPICRLPFRALLQI 325
>sp|Q3UE17|MEX3D_MOUSE RNA-binding protein MEX3D OS=Mus musculus GN=Mex3d PE=2 SV=2
Length = 643
Score = 47.8 bits (112), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
CVVC ++A PCGH + C CA+ + ++ P+CP CR ++ I+
Sbjct: 592 CVVCSEGEAMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIF 642
>sp|Q86XN8|MEX3D_HUMAN RNA-binding protein MEX3D OS=Homo sapiens GN=MEX3D PE=1 SV=3
Length = 651
Score = 47.8 bits (112), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
CVVC ++A PCGH + C CA+ + ++ P+CP CR ++ I+
Sbjct: 600 CVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIF 650
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 148 SDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRS 207
S E+ + + ++C VC+ + F PCGHLV C CA ++ CP+CR +R
Sbjct: 284 STEEQLQRLKEERMCKVCMDKDVSMLFVPCGHLVVCTECAPNLRH-----CPICRAAIRG 338
Query: 208 SMRIYFS 214
S+R + S
Sbjct: 339 SVRAFMS 345
>sp|Q8BM54|MYLIP_MOUSE E3 ubiquitin-protein ligase MYLIP OS=Mus musculus GN=Mylip PE=1
SV=1
Length = 445
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 156 IPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYF 213
+ + LC+ C S F PCGH VCC CA ++ CPVCR V +Y
Sbjct: 381 LKEAMLCMACCEEEINSTFCPCGHTVCCESCAAQLQ-----SCPVCRSRVEHVQHVYL 433
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 8 LPLTTAYQRLELANVSPFT-FLQAMFGLKCPIGVLAEEKILPLGKDISAVGICSFKNGIP 66
L L T Y++ +V FT + + P G+ E++L +G ++ +G N
Sbjct: 150 LGLETVYEKFH-PSVQSFTDAIGHYISGERPKGIQETEEMLKVGATLTGIGELVLDNNAV 208
Query: 67 EIKSCKD-LPYFLSEKTKDLMVVDLVNR--SKILFWSGIVL--GSLSIGILGYAIVRNWN 121
++ K + Y+LS + D L++R S + W +VL G + L + + + +
Sbjct: 209 RLQPPKQGMQYYLSSQDFD----SLLHRQESSVRLWKILVLVFGFATCATLFFILRKQYL 264
Query: 122 RWKDRQ----------QRMSRQLTEAPSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRI 171
++R + ++ L++A +D +S + CVVCL+ +
Sbjct: 265 HRQERLRQQQLQEEFLEHEAQLLSQASPEDRESLKSA-------------CVVCLSNFKS 311
Query: 172 SAFNPCGHLVCCRRCAISVEREASPK-CPVCRMTVRSSMRIYFS 214
F CGH+ CR+C +++ PK CP+CR + + +Y S
Sbjct: 312 CVFLECGHVCSCRQCYLAL---PEPKRCPICRREITRVIPLYNS 352
>sp|Q557E7|CBLA_DICDI E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum
GN=cblA-1 PE=1 SV=1
Length = 665
Score = 47.0 bits (110), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 147 GSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVR 206
GSDE LC VC+ + F CGHL CC C++ ++ KCP+CR +
Sbjct: 610 GSDES-------KDLCTVCMDNEINTVFLECGHLSCCSLCSVKLK-----KCPICRSRIT 657
Query: 207 SSMRIYFS 214
+ I+ S
Sbjct: 658 RVINIFKS 665
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 148 SDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRS 207
S E+ + + ++C VC+ F PCGHLV C CA ++ CP+CR +R
Sbjct: 304 STEEQLRQLKEERMCKVCMDNDVSMVFVPCGHLVVCTECAPNLR-----HCPICRAAIRG 358
Query: 208 SMRIYFS 214
S+R + S
Sbjct: 359 SVRAFMS 365
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIYFS 214
CV+CL+ F PC H V C +C E+EA CP CR ++ ++ F+
Sbjct: 760 CVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQARFA 812
>sp|Q9VUX2|MIB_DROME E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster
GN=mib1 PE=1 SV=3
Length = 1226
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRI 211
C+VC +R + F PCGH+ CC CA V+ KC +CR TV S +I
Sbjct: 970 CLVCSDAKRDTVFKPCGHVSCCETCAPRVK-----KCLICRETVSSREKI 1014
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTV 205
C+VC RR F PCGH+V C C+ ++ KC +CR +
Sbjct: 1017 CLVCSDRRAAVFFRPCGHMVACEHCSALMK-----KCVLCRTQI 1055
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 155 DIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
DI + +C VC R + F CGH C + C +E CP+CR TV + ++
Sbjct: 1176 DIKEQTMCPVCFDRIKNMVF-LCGHGTC-QMCGDQIE-----GCPICRKTVEKRILLF 1226
>sp|A1L3F4|MEX3B_XENLA RNA-binding protein MEX3B OS=Xenopus laevis GN=mex3b PE=2 SV=1
Length = 507
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 162 CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRIY 212
C +C I+A PCGH + C CA + + P+CPVC V ++RI+
Sbjct: 456 CSICFESEVIAALVPCGHNLFCMECANRICEKNQPQCPVCHAGVTQAIRIF 506
>sp|P41435|IAP1_NPVAC Apoptosis inhibitor 1 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 286
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 97 LFWSGIVLGSLSIGILGYAIVRNWNRWKDRQQRMSRQ-------------------LTEA 137
LF++G G ++ VR+W+ +D QR + + +T
Sbjct: 158 LFYTG--RGDETVCFFCDCCVRDWHTNEDTWQRHAAENPQCYFVLSVKGKEFCQNSITVT 215
Query: 138 PSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPK 197
D D ++ A DI + C VCL R+R + PC H C +C +++ K
Sbjct: 216 HVDKRDDDNLNEN--ADDIEEKYECKVCLERQRDAVLMPCRHFCVCVQCYFGLDQ----K 269
Query: 198 CPVCRMTVRSSMRIY 212
CP CR V ++I+
Sbjct: 270 CPTCRQDVTDFIKIF 284
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 159 GQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRI 211
G+ CV+CLT + +A PC HL C CA + R + KCP+CR + ++I
Sbjct: 318 GKECVICLTEPKDTAVMPCRHLCLCSDCAEEL-RFQTNKCPICRQPIHELVKI 369
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 138 PSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPK 197
PSDD +S S+ CVVCL+ R + PC HL C CA ++ +A+
Sbjct: 266 PSDDENSDNSSE------------CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQAN-N 312
Query: 198 CPVCRMTVRSSMRI 211
CP+CR+ R+ ++I
Sbjct: 313 CPICRLPFRALLQI 326
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 138 PSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPK 197
PSDD +S S+ CVVCL+ R + PC HL C CA ++ +A+
Sbjct: 267 PSDDENSDNSSE------------CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQAN-N 313
Query: 198 CPVCRMTVRSSMRI 211
CP+CR+ R+ ++I
Sbjct: 314 CPICRLPFRALLQI 327
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 143 DSQIGSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCR 202
+ + S ED D + CVVCL+ R + PC HL C CA ++ +A+ CP+CR
Sbjct: 259 NQETKSTEDENSD--NSSECVVCLSDLRDTLILPCRHLCLCNACADTLRYQAN-NCPICR 315
Query: 203 MTVRSSMRI 211
+ R+ ++I
Sbjct: 316 LPFRALLQI 324
>sp|Q8LA32|LUL4_ARATH Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana
GN=LUL4 PE=2 SV=1
Length = 359
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 159 GQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVCRMTVRSSMRI 211
G CV+C+T + +A PC HL C CA + R S KCP+CR + + I
Sbjct: 299 GTECVICMTEAKDTAVLPCRHLCMCSDCAKEL-RLQSNKCPICRQPIEELLEI 350
>sp|Q3TEL6|RN157_MOUSE RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2
Length = 685
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 143 DSQIGSDEDVAGDIPDGQL-CVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPKCPVC 201
DS++ D D+ D CVVCL+ R + PC HL C CA ++ +A+ CP+C
Sbjct: 262 DSKVAED-----DVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQAN-NCPIC 315
Query: 202 RMTVRSSMRI 211
R+ R+ ++I
Sbjct: 316 RLPFRALLQI 325
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 138 PSDDADSQIGSDEDVAGDIPDGQLCVVCLTRRRISAFNPCGHLVCCRRCAISVEREASPK 197
PSDD +S ++ CVVCL+ R + PC HL C CA ++ +A+
Sbjct: 266 PSDDENSDNSNE------------CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQAN-N 312
Query: 198 CPVCRMTVRSSMRI 211
CP+CR+ R+ ++I
Sbjct: 313 CPICRLPFRALLQI 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,377,411
Number of Sequences: 539616
Number of extensions: 3283475
Number of successful extensions: 10156
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 9883
Number of HSP's gapped (non-prelim): 332
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)