Query 028051
Match_columns 214
No_of_seqs 222 out of 2005
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 08:29:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028051.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028051hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kiz_A E3 ubiquitin-protein li 99.6 1.3E-16 4.4E-21 108.0 5.1 54 155-208 12-65 (69)
2 1iym_A EL5; ring-H2 finger, ub 99.6 7.9E-17 2.7E-21 104.2 3.3 51 155-205 3-54 (55)
3 1x4j_A Ring finger protein 38; 99.6 5.8E-17 2E-21 111.6 2.3 53 155-207 21-73 (75)
4 2ep4_A Ring finger protein 24; 99.6 1.9E-16 6.5E-21 108.6 4.6 54 155-208 13-66 (74)
5 2l0b_A E3 ubiquitin-protein li 99.6 2.3E-16 8E-21 112.8 3.6 52 155-206 38-89 (91)
6 2ecl_A Ring-box protein 2; RNF 99.6 5.4E-16 1.9E-20 108.6 4.5 52 154-205 12-75 (81)
7 2ect_A Ring finger protein 126 99.6 4.7E-16 1.6E-20 107.7 3.7 52 155-206 13-64 (78)
8 2ecm_A Ring finger and CHY zin 99.6 9.2E-16 3.1E-20 99.0 4.2 51 155-205 3-54 (55)
9 3dpl_R Ring-box protein 1; ubi 99.5 3.8E-15 1.3E-19 109.6 4.8 51 154-204 34-99 (106)
10 2ea6_A Ring finger protein 4; 99.5 4.1E-15 1.4E-19 100.1 3.7 51 155-205 13-67 (69)
11 3ng2_A RNF4, snurf, ring finge 99.5 3.3E-15 1.1E-19 101.3 3.1 52 155-206 8-63 (71)
12 1v87_A Deltex protein 2; ring- 99.5 9.7E-15 3.3E-19 108.1 4.6 52 156-207 24-95 (114)
13 1chc_A Equine herpes virus-1 r 99.5 9.4E-15 3.2E-19 98.3 3.7 51 155-207 3-53 (68)
14 2xeu_A Ring finger protein 4; 99.5 7.9E-15 2.7E-19 97.2 2.8 51 156-206 2-56 (64)
15 2d8s_A Cellular modulator of i 99.5 1E-14 3.6E-19 102.0 3.3 53 155-208 13-72 (80)
16 2ecn_A Ring finger protein 141 99.5 7.7E-15 2.6E-19 99.4 2.1 52 155-210 13-64 (70)
17 2d8t_A Dactylidin, ring finger 99.5 1.3E-14 4.4E-19 98.8 3.0 50 155-207 13-62 (71)
18 2djb_A Polycomb group ring fin 99.5 2.7E-14 9.1E-19 97.4 4.3 50 155-206 13-62 (72)
19 4a0k_B E3 ubiquitin-protein li 99.5 7.6E-15 2.6E-19 109.7 0.4 54 152-205 43-111 (117)
20 2ct2_A Tripartite motif protei 99.4 8E-14 2.7E-18 98.1 5.1 51 155-205 13-67 (88)
21 2csy_A Zinc finger protein 183 99.4 9.1E-14 3.1E-18 96.8 4.6 48 155-205 13-60 (81)
22 4ayc_A E3 ubiquitin-protein li 99.4 3.6E-14 1.2E-18 108.8 2.4 49 155-206 51-99 (138)
23 2yur_A Retinoblastoma-binding 99.4 1E-13 3.4E-18 95.1 3.9 49 155-206 13-64 (74)
24 2ysl_A Tripartite motif-contai 99.4 1.3E-13 4.5E-18 93.9 4.0 48 155-205 18-68 (73)
25 2ecy_A TNF receptor-associated 99.4 1.4E-13 4.8E-18 92.2 3.4 49 155-206 13-62 (66)
26 2ysj_A Tripartite motif-contai 99.4 5.8E-13 2E-17 88.3 5.0 43 155-200 18-63 (63)
27 3lrq_A E3 ubiquitin-protein li 99.4 2E-13 6.9E-18 99.1 2.9 48 155-205 20-69 (100)
28 1t1h_A Gspef-atpub14, armadill 99.3 5.2E-13 1.8E-17 92.2 4.2 48 155-205 6-54 (78)
29 2ecw_A Tripartite motif-contai 99.3 7.8E-13 2.7E-17 92.2 4.6 48 155-205 17-70 (85)
30 2y43_A E3 ubiquitin-protein li 99.3 5.3E-13 1.8E-17 96.4 3.1 49 156-206 21-69 (99)
31 2egp_A Tripartite motif-contai 99.3 2E-13 6.8E-18 94.3 0.5 48 155-205 10-64 (79)
32 2ecv_A Tripartite motif-contai 99.3 9.2E-13 3.1E-17 91.8 3.8 48 155-205 17-70 (85)
33 4ap4_A E3 ubiquitin ligase RNF 99.3 6.3E-13 2.2E-17 100.0 3.1 52 155-206 5-60 (133)
34 1g25_A CDK-activating kinase a 99.3 1.2E-12 4E-17 87.3 4.0 51 156-206 2-55 (65)
35 2ckl_A Polycomb group ring fin 99.3 1.1E-12 3.6E-17 96.3 4.1 50 155-206 13-62 (108)
36 3ztg_A E3 ubiquitin-protein li 99.3 1.4E-12 5E-17 92.7 4.4 47 155-204 11-60 (92)
37 2ecj_A Tripartite motif-contai 99.3 1E-12 3.5E-17 85.3 3.3 43 155-200 13-58 (58)
38 3fl2_A E3 ubiquitin-protein li 99.3 1.1E-12 3.7E-17 98.6 3.1 49 155-206 50-99 (124)
39 2ct0_A Non-SMC element 1 homol 99.3 1.1E-12 3.8E-17 90.1 2.5 50 155-206 13-64 (74)
40 4ap4_A E3 ubiquitin ligase RNF 99.2 3E-12 1E-16 96.2 3.6 54 154-207 69-126 (133)
41 3hct_A TNF receptor-associated 99.2 4.7E-12 1.6E-16 94.3 3.5 49 155-206 16-65 (118)
42 1jm7_A BRCA1, breast cancer ty 99.2 2.7E-12 9.3E-17 94.3 2.1 48 156-206 20-70 (112)
43 1z6u_A NP95-like ring finger p 99.2 5.2E-12 1.8E-16 98.2 3.1 50 155-207 76-126 (150)
44 2ckl_B Ubiquitin ligase protei 99.2 9.6E-12 3.3E-16 97.8 4.0 48 156-205 53-101 (165)
45 3l11_A E3 ubiquitin-protein li 99.2 1.8E-12 6.2E-17 96.0 -0.2 49 155-206 13-62 (115)
46 1rmd_A RAG1; V(D)J recombinati 99.2 7E-12 2.4E-16 93.0 2.9 48 156-206 22-70 (116)
47 2kr4_A Ubiquitin conjugation f 99.2 2.2E-11 7.4E-16 85.8 4.8 49 155-206 12-60 (85)
48 2vje_A E3 ubiquitin-protein li 99.2 8.2E-12 2.8E-16 83.4 2.5 51 155-208 6-59 (64)
49 1e4u_A Transcriptional repress 99.2 1.8E-11 6.1E-16 85.0 3.7 53 154-206 8-62 (78)
50 1bor_A Transcription factor PM 99.1 5E-12 1.7E-16 82.1 0.1 46 155-206 4-49 (56)
51 3knv_A TNF receptor-associated 99.1 1.9E-11 6.6E-16 94.1 3.1 47 155-204 29-76 (141)
52 1wgm_A Ubiquitin conjugation f 99.1 5.7E-11 1.9E-15 86.0 4.4 49 155-206 20-69 (98)
53 4ic3_A E3 ubiquitin-protein li 99.1 1.4E-11 4.7E-16 84.5 1.0 48 156-210 23-71 (74)
54 2vje_B MDM4 protein; proto-onc 99.1 3.1E-11 1.1E-15 80.3 2.6 51 155-208 5-58 (63)
55 2kre_A Ubiquitin conjugation f 99.1 5.4E-11 1.9E-15 86.4 4.0 49 155-206 27-75 (100)
56 3k1l_B Fancl; UBC, ring, RWD, 99.1 3.7E-11 1.3E-15 104.1 2.5 58 155-212 306-379 (381)
57 2y1n_A E3 ubiquitin-protein li 99.0 1E-10 3.4E-15 103.5 4.5 49 156-207 331-380 (389)
58 1jm7_B BARD1, BRCA1-associated 99.0 2.5E-11 8.7E-16 90.2 0.0 46 155-205 20-66 (117)
59 3hcs_A TNF receptor-associated 99.0 2.7E-10 9.4E-15 89.8 3.4 49 155-206 16-65 (170)
60 1vyx_A ORF K3, K3RING; zinc-bi 98.9 4.2E-10 1.4E-14 74.2 3.5 49 154-205 3-58 (60)
61 2yu4_A E3 SUMO-protein ligase 98.9 3.5E-10 1.2E-14 81.0 3.2 46 155-203 5-59 (94)
62 2ecg_A Baculoviral IAP repeat- 98.9 2.1E-10 7.1E-15 78.7 1.0 47 156-209 24-71 (75)
63 2c2l_A CHIP, carboxy terminus 98.9 1E-09 3.5E-14 92.1 3.8 48 155-205 206-254 (281)
64 2ea5_A Cell growth regulator w 98.8 1.6E-09 5.4E-14 73.1 3.5 48 155-209 13-61 (68)
65 2yho_A E3 ubiquitin-protein li 98.8 8.7E-10 3E-14 76.5 0.8 46 156-208 17-63 (79)
66 1wim_A KIAA0161 protein; ring 98.7 3.4E-09 1.2E-13 75.6 2.8 48 156-203 4-61 (94)
67 2f42_A STIP1 homology and U-bo 98.7 5.4E-09 1.8E-13 83.4 3.8 49 155-206 104-153 (179)
68 3htk_C E3 SUMO-protein ligase 98.7 7.6E-09 2.6E-13 86.8 3.3 49 155-205 179-231 (267)
69 2bay_A PRE-mRNA splicing facto 98.6 1.7E-08 5.9E-13 66.5 2.7 46 157-205 3-49 (61)
70 3t6p_A Baculoviral IAP repeat- 98.6 8.5E-09 2.9E-13 90.2 0.9 48 155-209 293-341 (345)
71 3vk6_A E3 ubiquitin-protein li 98.3 3.6E-07 1.2E-11 65.4 2.8 48 159-208 3-51 (101)
72 3nw0_A Non-structural maintena 97.9 5.4E-06 1.8E-10 68.8 4.1 49 156-206 179-229 (238)
73 2ko5_A Ring finger protein Z; 97.3 5.1E-05 1.8E-09 53.4 0.9 50 156-210 27-77 (99)
74 2jun_A Midline-1; B-BOX, TRIM, 96.2 0.0027 9.2E-08 45.0 2.9 36 156-191 2-38 (101)
75 2ysm_A Myeloid/lymphoid or mix 92.9 0.026 8.9E-07 40.7 0.8 39 154-192 4-42 (111)
76 2lri_C Autoimmune regulator; Z 92.6 0.062 2.1E-06 35.3 2.2 47 155-204 10-60 (66)
77 2k16_A Transcription initiatio 91.6 0.033 1.1E-06 37.3 -0.1 53 155-207 16-72 (75)
78 1we9_A PHD finger family prote 90.8 0.039 1.3E-06 35.8 -0.3 51 154-204 3-59 (64)
79 1f62_A Transcription factor WS 90.1 0.13 4.3E-06 31.7 1.6 44 159-202 2-49 (51)
80 1wil_A KIAA1045 protein; ring 90.0 0.23 7.8E-06 34.2 3.0 35 155-190 13-47 (89)
81 2l5u_A Chromodomain-helicase-D 89.7 0.12 4E-06 33.3 1.3 46 155-203 9-58 (61)
82 2puy_A PHD finger protein 21A; 89.6 0.058 2E-06 34.6 -0.2 50 155-207 3-56 (60)
83 1mm2_A MI2-beta; PHD, zinc fin 89.4 0.048 1.7E-06 35.2 -0.8 49 154-205 6-58 (61)
84 2yql_A PHD finger protein 21A; 88.6 0.051 1.8E-06 34.3 -1.0 46 154-202 6-55 (56)
85 1xwh_A Autoimmune regulator; P 85.2 0.12 4E-06 33.8 -0.8 46 155-203 6-55 (66)
86 2e6r_A Jumonji/ARID domain-con 84.4 0.094 3.2E-06 36.7 -1.6 49 155-203 14-66 (92)
87 2vpb_A Hpygo1, pygopus homolog 84.2 0.84 2.9E-05 29.6 3.1 35 154-188 5-41 (65)
88 2yt5_A Metal-response element- 82.5 0.48 1.6E-05 30.6 1.3 49 155-203 4-61 (66)
89 3v43_A Histone acetyltransfera 82.3 2 6.9E-05 30.7 4.8 33 156-188 4-42 (112)
90 2cs3_A Protein C14ORF4, MY039 82.2 0.73 2.5E-05 31.4 2.2 39 156-194 14-53 (93)
91 2lbm_A Transcriptional regulat 81.7 1.3 4.4E-05 33.5 3.6 48 153-203 59-117 (142)
92 3m62_A Ubiquitin conjugation f 81.0 1.2 4E-05 43.5 4.0 48 155-205 889-937 (968)
93 3u5n_A E3 ubiquitin-protein li 80.4 0.27 9.1E-06 39.3 -0.6 47 154-203 4-54 (207)
94 2ku3_A Bromodomain-containing 79.7 1.5 5E-05 29.0 3.0 51 153-203 12-66 (71)
95 2l43_A N-teminal domain from h 77.1 1.1 3.8E-05 30.8 1.9 50 155-204 23-76 (88)
96 1joc_A EEA1, early endosomal a 76.4 2.5 8.6E-05 30.9 3.8 41 150-190 62-103 (125)
97 1fp0_A KAP-1 corepressor; PHD 76.1 0.74 2.5E-05 31.9 0.7 47 154-203 22-72 (88)
98 1wep_A PHF8; structural genomi 75.1 1.6 5.4E-05 29.2 2.2 49 155-204 10-64 (79)
99 2e6s_A E3 ubiquitin-protein li 74.5 0.58 2E-05 31.5 -0.2 44 159-202 28-76 (77)
100 3t7l_A Zinc finger FYVE domain 74.4 2.7 9.2E-05 28.9 3.3 55 151-205 14-75 (90)
101 3i2d_A E3 SUMO-protein ligase 73.5 2.6 9E-05 36.7 3.7 45 158-204 250-298 (371)
102 1z60_A TFIIH basal transcripti 73.4 0.78 2.7E-05 29.3 0.3 43 158-200 16-58 (59)
103 2lv9_A Histone-lysine N-methyl 73.3 0.85 2.9E-05 32.0 0.4 45 157-202 28-75 (98)
104 3asl_A E3 ubiquitin-protein li 73.2 0.53 1.8E-05 31.0 -0.6 45 159-203 20-69 (70)
105 3ql9_A Transcriptional regulat 72.3 3.2 0.00011 30.7 3.4 53 153-208 53-116 (129)
106 4fo9_A E3 SUMO-protein ligase 72.0 3 0.0001 36.2 3.6 45 158-204 216-264 (360)
107 1z2q_A LM5-1; membrane protein 71.9 3.7 0.00013 27.7 3.5 39 152-190 16-55 (84)
108 1wen_A Inhibitor of growth fam 71.8 0.97 3.3E-05 29.9 0.4 46 156-205 15-67 (71)
109 2yw8_A RUN and FYVE domain-con 71.1 2.8 9.5E-05 28.2 2.7 40 151-190 13-53 (82)
110 2kwj_A Zinc finger protein DPF 71.0 3.1 0.00011 29.8 3.0 33 158-190 2-41 (114)
111 3ask_A E3 ubiquitin-protein li 70.2 0.95 3.2E-05 36.8 0.1 46 158-203 175-225 (226)
112 1weu_A Inhibitor of growth fam 69.0 1.3 4.6E-05 30.7 0.7 46 156-205 35-87 (91)
113 1wem_A Death associated transc 68.9 3.9 0.00013 27.0 3.0 47 156-203 15-70 (76)
114 2xb1_A Pygopus homolog 2, B-ce 68.8 2.7 9.1E-05 29.8 2.3 47 158-204 4-62 (105)
115 1zbd_B Rabphilin-3A; G protein 68.6 2.3 7.8E-05 31.7 1.9 49 155-203 53-107 (134)
116 3v43_A Histone acetyltransfera 67.5 1.3 4.6E-05 31.6 0.4 45 158-202 62-111 (112)
117 2kgg_A Histone demethylase jar 66.9 2 6.8E-05 26.3 1.1 43 159-201 4-52 (52)
118 1y02_A CARP2, FYVE-ring finger 66.3 1 3.4E-05 33.0 -0.4 50 155-204 17-67 (120)
119 1weo_A Cellulose synthase, cat 66.1 6.9 0.00024 27.0 3.8 51 156-206 15-70 (93)
120 2d8v_A Zinc finger FYVE domain 66.0 4.4 0.00015 26.4 2.6 33 154-190 5-38 (67)
121 2zet_C Melanophilin; complex, 65.9 3.6 0.00012 31.3 2.6 47 156-203 67-117 (153)
122 2ri7_A Nucleosome-remodeling f 65.4 1.4 4.8E-05 33.8 0.2 48 155-203 6-59 (174)
123 1x4u_A Zinc finger, FYVE domai 65.0 5.1 0.00017 27.0 3.0 38 153-190 10-48 (84)
124 1wev_A Riken cDNA 1110020M19; 64.7 1.7 6E-05 29.8 0.6 51 155-205 14-74 (88)
125 1wfk_A Zinc finger, FYVE domai 64.5 4.8 0.00016 27.5 2.8 53 154-206 6-66 (88)
126 2kwj_A Zinc finger protein DPF 60.0 0.91 3.1E-05 32.7 -1.7 48 159-206 60-111 (114)
127 3mjh_B Early endosome antigen 59.3 2.1 7.3E-05 24.1 0.2 14 156-169 4-17 (34)
128 3shb_A E3 ubiquitin-protein li 58.7 0.98 3.3E-05 30.4 -1.6 44 159-202 28-76 (77)
129 2gmg_A Hypothetical protein PF 57.4 1.3 4.3E-05 31.7 -1.3 31 173-208 68-98 (105)
130 1vfy_A Phosphatidylinositol-3- 57.0 8.9 0.0003 25.0 3.0 34 157-190 11-45 (73)
131 3o70_A PHD finger protein 13; 52.6 6.4 0.00022 25.5 1.7 47 155-202 17-66 (68)
132 3c6w_A P28ING5, inhibitor of g 51.3 2.6 9.1E-05 26.6 -0.4 43 156-202 8-57 (59)
133 4gne_A Histone-lysine N-methyl 49.8 6.5 0.00022 28.0 1.5 42 155-202 13-61 (107)
134 1wew_A DNA-binding family prot 48.6 13 0.00044 24.6 2.7 48 156-204 15-73 (78)
135 1dvp_A HRS, hepatocyte growth 48.4 9.2 0.00032 30.4 2.4 35 156-190 160-195 (220)
136 3zyq_A Hepatocyte growth facto 48.2 10 0.00035 30.4 2.6 37 155-191 162-199 (226)
137 2vnf_A ING 4, P29ING4, inhibit 48.1 3.1 0.00011 26.3 -0.4 43 156-202 9-58 (60)
138 3vhs_A ATPase wrnip1; zinc fin 45.4 4.9 0.00017 21.1 0.2 11 196-206 8-18 (29)
139 3mpx_A FYVE, rhogef and PH dom 45.2 4.5 0.00015 35.2 0.0 52 153-204 371-430 (434)
140 3a1b_A DNA (cytosine-5)-methyl 44.7 12 0.00042 28.5 2.4 37 154-193 76-114 (159)
141 2o35_A Hypothetical protein DU 44.6 9.3 0.00032 26.9 1.5 12 182-193 43-54 (105)
142 3fyb_A Protein of unknown func 44.2 9.5 0.00032 26.8 1.5 11 182-192 42-52 (104)
143 2ysm_A Myeloid/lymphoid or mix 41.2 10 0.00034 26.7 1.4 44 159-202 56-103 (111)
144 3kqi_A GRC5, PHD finger protei 41.1 16 0.00053 23.9 2.2 47 157-203 9-61 (75)
145 2pv0_B DNA (cytosine-5)-methyl 40.3 21 0.00072 31.2 3.5 47 154-203 90-148 (386)
146 2a20_A Regulating synaptic mem 39.2 21 0.00073 22.6 2.5 48 155-202 7-59 (62)
147 1wee_A PHD finger family prote 38.7 8.8 0.0003 24.9 0.7 47 156-203 15-66 (72)
148 2jvx_A NF-kappa-B essential mo 37.6 7.2 0.00024 20.9 0.1 11 195-205 4-14 (28)
149 1wd2_A Ariadne-1 protein homol 35.8 3.5 0.00012 26.2 -1.6 37 157-193 6-47 (60)
150 1x62_A C-terminal LIM domain p 35.7 24 0.00083 22.7 2.5 40 155-205 13-52 (79)
151 2jmo_A Parkin; IBR, E3 ligase, 33.2 3.3 0.00011 27.7 -2.2 14 177-190 55-68 (80)
152 1zfo_A LAsp-1; LIM domain, zin 31.7 20 0.0007 19.2 1.3 19 193-211 2-20 (31)
153 3f6q_B LIM and senescent cell 31.6 21 0.00071 22.2 1.6 43 156-207 10-52 (72)
154 2cu8_A Cysteine-rich protein 2 30.7 25 0.00085 22.4 1.9 40 156-205 8-47 (76)
155 2csz_A Synaptotagmin-like prot 30.7 28 0.00094 23.2 2.1 33 155-187 23-57 (76)
156 2dj7_A Actin-binding LIM prote 30.4 34 0.0012 22.2 2.6 40 156-205 14-53 (80)
157 6rxn_A Rubredoxin; electron tr 30.2 9 0.00031 23.0 -0.4 8 196-203 32-39 (46)
158 2ct7_A Ring finger protein 31; 29.9 7.3 0.00025 26.3 -0.9 35 160-194 28-65 (86)
159 2lcq_A Putative toxin VAPC6; P 29.4 13 0.00044 28.0 0.3 28 173-206 133-160 (165)
160 1iml_A CRIP, cysteine rich int 28.7 17 0.0006 23.2 0.8 47 155-205 25-72 (76)
161 1x4l_A Skeletal muscle LIM-pro 28.7 24 0.00084 22.1 1.6 40 157-205 5-46 (72)
162 3ph0_C ASCG; type III secretio 27.7 30 0.001 21.8 1.7 17 179-195 18-36 (61)
163 2co8_A NEDD9 interacting prote 27.6 33 0.0011 22.3 2.1 40 156-205 14-53 (82)
164 1x61_A Thyroid receptor intera 27.2 48 0.0016 20.6 2.8 11 158-168 6-16 (72)
165 3o7a_A PHD finger protein 13 v 27.1 21 0.00072 21.5 1.0 41 162-202 8-51 (52)
166 2pk7_A Uncharacterized protein 26.3 10 0.00035 24.8 -0.7 18 188-205 2-19 (69)
167 2xjy_A Rhombotin-2; oncoprotei 25.4 47 0.0016 23.4 2.8 50 156-205 28-77 (131)
168 1x63_A Skeletal muscle LIM-pro 25.1 51 0.0018 21.1 2.7 40 157-205 15-54 (82)
169 4ayb_P DNA-directed RNA polyme 24.9 3.1 0.00011 25.2 -3.1 14 195-208 24-37 (48)
170 1l8d_A DNA double-strand break 24.6 14 0.00049 25.8 -0.2 9 196-204 49-57 (112)
171 1m3v_A FLIN4, fusion of the LI 23.9 37 0.0013 23.9 2.0 50 157-206 32-81 (122)
172 1wyh_A SLIM 2, skeletal muscle 23.6 59 0.002 20.1 2.8 40 157-205 5-44 (72)
173 2jny_A Uncharacterized BCR; st 23.6 9.8 0.00034 24.7 -1.1 18 188-205 4-21 (67)
174 2kdx_A HYPA, hydrogenase/ureas 23.4 17 0.00059 25.9 0.0 27 173-205 74-101 (119)
175 2l3k_A Rhombotin-2, linker, LI 22.1 43 0.0015 23.6 2.0 33 158-191 37-69 (123)
176 2rsd_A E3 SUMO-protein ligase 22.0 23 0.00078 22.6 0.4 45 157-203 10-65 (68)
177 2i50_A Ubiquitin carboxyl-term 21.5 23 0.00077 25.8 0.3 29 175-203 4-37 (126)
178 2d8x_A Protein pinch; LIM doma 21.3 29 0.00099 21.6 0.8 38 157-205 5-42 (70)
179 1g47_A Pinch protein; LIM doma 21.3 81 0.0028 19.7 3.1 41 156-205 10-50 (77)
180 1x68_A FHL5 protein; four-and- 20.8 56 0.0019 20.7 2.2 40 157-205 5-46 (76)
181 2p58_C Putative type III secre 20.2 43 0.0015 23.9 1.5 19 178-196 18-38 (116)
182 2jmi_A Protein YNG1, ING1 homo 20.1 30 0.001 23.7 0.7 43 156-202 25-75 (90)
183 1lko_A Rubrerythrin all-iron(I 20.1 32 0.0011 26.7 1.0 9 195-203 172-180 (191)
184 2uwj_G Type III export protein 20.1 43 0.0015 23.8 1.5 19 178-196 17-37 (115)
No 1
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.64 E-value=1.3e-16 Score=108.01 Aligned_cols=54 Identities=24% Similarity=0.625 Sum_probs=48.5
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhhhc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKIF 208 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~~ 208 (214)
+++..|+||++.|..+..++.++|||.||..||.+|++.+.+||+||+.+...+
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQL 65 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCC
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcC
Confidence 456789999999988778889999999999999999999999999999987654
No 2
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.64 E-value=7.9e-17 Score=104.19 Aligned_cols=51 Identities=27% Similarity=0.743 Sum_probs=45.4
Q ss_pred cCCCccccccccccCCCCeEecC-CCCcccHHHHHHHHhcCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITK-CEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~-C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
+++..|+||++.|..++....++ |||.||..||.+|++++.+||+||+.+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 45678999999998877777776 9999999999999999999999998764
No 3
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=5.8e-17 Score=111.61 Aligned_cols=53 Identities=25% Similarity=0.763 Sum_probs=47.7
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKI 207 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~ 207 (214)
+++..|+||++.|..++..+.++|+|.||..||.+|++.+.+||+||+.+...
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGPS 73 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCCC
Confidence 46678999999998888788899999999999999999999999999987643
No 4
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.9e-16 Score=108.58 Aligned_cols=54 Identities=31% Similarity=0.875 Sum_probs=48.4
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhhhc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKIF 208 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~~ 208 (214)
+++..|+||++.|........++|+|.||..||.+|++.+.+||+||+.+..+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLA 66 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccccccc
Confidence 456789999999988887888899999999999999999999999999987544
No 5
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.61 E-value=2.3e-16 Score=112.81 Aligned_cols=52 Identities=35% Similarity=0.780 Sum_probs=47.3
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
+++..|+||++.|..++..+.++|+|.||..||.+|++.+.+||+||+.+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 5667899999999888888889999999999999999999999999998754
No 6
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=5.4e-16 Score=108.63 Aligned_cols=52 Identities=29% Similarity=0.708 Sum_probs=42.2
Q ss_pred ccCCCccccccccccC-----------CC-CeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 154 IEEEDVCPTCLEEYDA-----------EN-PRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~-----------~~-~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
+.+++.|+||++.|.. ++ ...+++|+|.||..||.+||+++.+||+||+.+.
T Consensus 12 ~~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~ 75 (81)
T 2ecl_A 12 DVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWV 75 (81)
T ss_dssp SCCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCC
T ss_pred cCCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcc
Confidence 3567779999988843 33 3344569999999999999999999999999875
No 7
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.59 E-value=4.7e-16 Score=107.67 Aligned_cols=52 Identities=35% Similarity=0.808 Sum_probs=47.1
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
+++..|+||++.|......+.++|+|.||..||.+|++.+.+||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 4567899999999887778889999999999999999999999999998864
No 8
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.58 E-value=9.2e-16 Score=99.04 Aligned_cols=51 Identities=25% Similarity=0.608 Sum_probs=44.1
Q ss_pred cCCCccccccccccC-CCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDA-ENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~-~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
.++..|+||++.|.. +...+.++|+|.||..||.+|++.+.+||+||+.+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 356779999999944 456788999999999999999999999999998763
No 9
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.54 E-value=3.8e-15 Score=109.63 Aligned_cols=51 Identities=25% Similarity=0.531 Sum_probs=44.2
Q ss_pred ccCCCccccccccccCC---------------CCeEecCCCCcccHHHHHHHHhcCCcccccccch
Q 028051 154 IEEEDVCPTCLEEYDAE---------------NPRIITKCEHHFHLACIFEWMERSDTCPVCNQVR 204 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~---------------~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~ 204 (214)
+.+++.|+||++.|... ..++.++|+|.||..||.+||+++.+||+||+.+
T Consensus 34 d~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 34 DIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 99 (106)
T ss_dssp SSCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBC
T ss_pred CCCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcc
Confidence 45678899999998643 2367789999999999999999999999999985
No 10
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=4.1e-15 Score=100.07 Aligned_cols=51 Identities=25% Similarity=0.668 Sum_probs=44.1
Q ss_pred cCCCccccccccccC----CCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDA----ENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~----~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
.+...|+||++.|.. +..++.++|||.||..||.+|++.+.+||+||+.+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 567789999999854 244578999999999999999999999999999874
No 11
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.52 E-value=3.3e-15 Score=101.25 Aligned_cols=52 Identities=25% Similarity=0.659 Sum_probs=45.3
Q ss_pred cCCCccccccccccC----CCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDA----ENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~----~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
+++..|+||++.|.. +...+.++|||.||..||.+|++.+.+||+||+.+..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccCh
Confidence 567789999999854 3556889999999999999999999999999998864
No 12
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.51 E-value=9.7e-15 Score=108.10 Aligned_cols=52 Identities=31% Similarity=0.695 Sum_probs=42.2
Q ss_pred CCCccccccccccCCC---------------CeEecCCCCcccHHHHHHHH-----hcCCcccccccchhhh
Q 028051 156 EEDVCPTCLEEYDAEN---------------PRIITKCEHHFHLACIFEWM-----ERSDTCPVCNQVRLKI 207 (214)
Q Consensus 156 e~~~C~ICle~~~~~~---------------~~~~l~C~H~FH~~CI~~Wl-----~~~~tCPvCr~~~~~~ 207 (214)
.++.|+|||+.|.... ...+++|+|.||..||.+|| +.+.+||+||+.+...
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 4567999999995532 34478999999999999999 4577999999987644
No 13
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.50 E-value=9.4e-15 Score=98.33 Aligned_cols=51 Identities=31% Similarity=0.782 Sum_probs=44.2
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKI 207 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~ 207 (214)
+++..|+||++.+. ++.+.++|||.||..||.+|++.+.+||+||+.+...
T Consensus 3 ~~~~~C~IC~~~~~--~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 53 (68)
T 1chc_A 3 TVAERCPICLEDPS--NYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESV 53 (68)
T ss_dssp CCCCCCSSCCSCCC--SCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCE
T ss_pred CCCCCCeeCCcccc--CCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhh
Confidence 45677999999984 3467899999999999999999999999999988644
No 14
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.49 E-value=7.9e-15 Score=97.22 Aligned_cols=51 Identities=25% Similarity=0.664 Sum_probs=44.1
Q ss_pred CCCccccccccccC----CCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 156 EEDVCPTCLEEYDA----ENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 156 e~~~C~ICle~~~~----~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
++..|+||++.+.. +.....++|||.||..||.+|++.+.+||+||+.+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 45679999999854 3455789999999999999999999999999998864
No 15
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1e-14 Score=101.97 Aligned_cols=53 Identities=36% Similarity=0.775 Sum_probs=44.6
Q ss_pred cCCCccccccccccCCCCeEecCCC-----CcccHHHHHHHHhcCC--cccccccchhhhc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCE-----HHFHLACIFEWMERSD--TCPVCNQVRLKIF 208 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~-----H~FH~~CI~~Wl~~~~--tCPvCr~~~~~~~ 208 (214)
.+++.|.|||++|+.++.+ ++||+ |.||..||.+||+.++ +||+||+.+....
T Consensus 13 ~~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 5667899999999877765 68996 9999999999998764 8999999886433
No 16
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=7.7e-15 Score=99.39 Aligned_cols=52 Identities=29% Similarity=0.718 Sum_probs=44.9
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhhhccc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKIFAS 210 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~~~~ 210 (214)
.+...|+||++.+.. +.++|||.||..||.+|++++.+||+||+.+......
T Consensus 13 ~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 64 (70)
T 2ecn_A 13 TDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANES 64 (70)
T ss_dssp CCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCCC
T ss_pred CCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCcc
Confidence 456789999999855 6789999999999999999999999999998755433
No 17
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.3e-14 Score=98.77 Aligned_cols=50 Identities=20% Similarity=0.368 Sum_probs=43.6
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKI 207 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~ 207 (214)
.++..|+||++.+.. .+.++|||.||..||.+|++.+.+||+||+.+...
T Consensus 13 ~~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 13 LTVPECAICLQTCVH---PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp SSCCBCSSSSSBCSS---EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred CCCCCCccCCcccCC---CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 456789999999854 56789999999999999999999999999988643
No 18
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=2.7e-14 Score=97.44 Aligned_cols=50 Identities=30% Similarity=0.550 Sum_probs=43.0
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
++...|+||++.+.. ++.+++|||.||..||.+|++.+.+||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 13 TPYILCSICKGYLID--ATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQ 62 (72)
T ss_dssp CGGGSCTTTSSCCSS--CEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCS
T ss_pred CCCCCCCCCChHHHC--cCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCc
Confidence 456789999999854 45556999999999999999999999999998764
No 19
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.45 E-value=7.6e-15 Score=109.70 Aligned_cols=54 Identities=26% Similarity=0.484 Sum_probs=3.3
Q ss_pred ccccCCCccccccccccCC---------------CCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 152 AVIEEEDVCPTCLEEYDAE---------------NPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 152 ~~~ee~~~C~ICle~~~~~---------------~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
..+.+++.|+||++.|... ..+..++|+|.||..||.+||+++.+||+||+++.
T Consensus 43 ~wd~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 43 AWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp EECCCC---------------------------------------------------------------
T ss_pred eecCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 3445678899999999542 13344689999999999999999999999999853
No 20
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=8e-14 Score=98.14 Aligned_cols=51 Identities=25% Similarity=0.648 Sum_probs=44.0
Q ss_pred cCCCccccccccccCCCC-eEecCCCCcccHHHHHHHHhcC---Ccccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENP-RIITKCEHHFHLACIFEWMERS---DTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~-~~~l~C~H~FH~~CI~~Wl~~~---~tCPvCr~~~~ 205 (214)
++...|+||++.|...+. ++.++|||.||..||.+|++.+ .+||+||+.+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 566789999999976553 7788999999999999999886 79999999764
No 21
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=9.1e-14 Score=96.82 Aligned_cols=48 Identities=27% Similarity=0.607 Sum_probs=42.5
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
++...|+||++.|.. +++++|||.||..||.+|++...+||+||+.+.
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQN---PVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCCS---EEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhcC---eeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 456689999999854 567999999999999999999999999999875
No 22
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.42 E-value=3.6e-14 Score=108.83 Aligned_cols=49 Identities=35% Similarity=0.731 Sum_probs=43.0
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
+++..|+||++.|.. +++++|||.||..||.+|++++.+||+||+.+..
T Consensus 51 ~~~~~C~iC~~~~~~---~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 51 ENELQCIICSEYFIE---AVTLNCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp HHHSBCTTTCSBCSS---EEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred cccCCCcccCcccCC---ceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 455679999999854 6678999999999999999999999999998753
No 23
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.41 E-value=1e-13 Score=95.14 Aligned_cols=49 Identities=24% Similarity=0.579 Sum_probs=41.3
Q ss_pred cCCCccccccccccCCCCeEecC-CCCcccHHHHHHHHhcC--Ccccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITK-CEHHFHLACIFEWMERS--DTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~-C~H~FH~~CI~~Wl~~~--~tCPvCr~~~~~ 206 (214)
.++..|+||++.|.. ++.++ |||.||..||.+|++.+ .+||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~ 64 (74)
T 2yur_A 13 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVS 64 (74)
T ss_dssp CGGGSCSSSCCCCTT---CEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCC
T ss_pred CCCCCCcCCChHHhC---CeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCC
Confidence 456789999999864 45688 99999999999999876 689999997653
No 24
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=1.3e-13 Score=93.86 Aligned_cols=48 Identities=33% Similarity=0.732 Sum_probs=41.2
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHh---cCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWME---RSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~---~~~tCPvCr~~~~ 205 (214)
+++..|+||++.|.. ++.++|||.||..||.+|++ ...+||+||+.+.
T Consensus 18 ~~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 18 QEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCCBCTTTCSBCSS---EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred ccCCEeccCCcccCC---eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 567789999998864 66779999999999999997 4568999999875
No 25
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.4e-13 Score=92.19 Aligned_cols=49 Identities=24% Similarity=0.542 Sum_probs=41.1
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHH-hcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWM-ERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl-~~~~tCPvCr~~~~~ 206 (214)
+++..|+||++.+.. ++.++|||.||..||.+|+ +.+.+||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCS---PKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEESS---CCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhcC---eeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 566789999999864 3458999999999999999 456789999998754
No 26
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=5.8e-13 Score=88.26 Aligned_cols=43 Identities=37% Similarity=0.851 Sum_probs=36.9
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHh---cCCccccc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWME---RSDTCPVC 200 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~---~~~tCPvC 200 (214)
+++..|+||++.|.. ++.++|||.||..||.+|++ .+.+||+|
T Consensus 18 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSS---CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCC---eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 567789999999864 55679999999999999998 45689998
No 27
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.36 E-value=2e-13 Score=99.06 Aligned_cols=48 Identities=23% Similarity=0.596 Sum_probs=41.5
Q ss_pred cCCCccccccccccCCCCeEe-cCCCCcccHHHHHHHHhcC-Ccccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRII-TKCEHHFHLACIFEWMERS-DTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~-l~C~H~FH~~CI~~Wl~~~-~tCPvCr~~~~ 205 (214)
+++..|+||++.|.. ++. ++|||.||..||.+|++.+ .+||+||+.+.
T Consensus 20 ~~~~~C~IC~~~~~~---p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 20 AEVFRCFICMEKLRD---ARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HHHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCccCCccccC---ccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 356679999999854 445 9999999999999999988 69999999874
No 28
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.35 E-value=5.2e-13 Score=92.16 Aligned_cols=48 Identities=25% Similarity=0.514 Sum_probs=42.1
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc-CCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-SDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-~~tCPvCr~~~~ 205 (214)
.++..|+||++.|.. ++.++|||.||..||.+|++. +.+||+||+.+.
T Consensus 6 ~~~~~C~IC~~~~~~---Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 6 PEYFRCPISLELMKD---PVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSSCTTTSCCCSS---EEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred cccCCCCCccccccC---CEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 467789999999854 567899999999999999987 789999999875
No 29
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.34 E-value=7.8e-13 Score=92.15 Aligned_cols=48 Identities=38% Similarity=0.723 Sum_probs=41.6
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc------CCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER------SDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~------~~tCPvCr~~~~ 205 (214)
+++..|+||++.|.. .+.++|||.||..||.+|++. ...||+||+.+.
T Consensus 17 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 17 KEEVTCPICLELLKE---PVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp CTTTSCTTTCSCCSS---CEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred ccCCCCcCCChhhCc---ceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 456789999999854 457899999999999999988 678999999875
No 30
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.32 E-value=5.3e-13 Score=96.38 Aligned_cols=49 Identities=24% Similarity=0.649 Sum_probs=41.5
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
++..|+||++.|.. ++.+++|||.||..||.+|++.+.+||+||+.+..
T Consensus 21 ~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNI--AMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSS--EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCC--cCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 45679999999864 34445999999999999999999999999998753
No 31
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.31 E-value=2e-13 Score=94.26 Aligned_cols=48 Identities=33% Similarity=0.658 Sum_probs=41.5
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc-------CCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-------SDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-------~~tCPvCr~~~~ 205 (214)
+++..|+||++.|.. ++.++|||.||..||.+|++. ..+||+||+.+.
T Consensus 10 ~~~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 10 QEEVTCPICLELLTE---PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCCEETTTTEECSS---CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred ccCCCCcCCCcccCC---eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 567789999999865 446899999999999999987 678999999875
No 32
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=9.2e-13 Score=91.78 Aligned_cols=48 Identities=33% Similarity=0.720 Sum_probs=41.7
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc------CCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER------SDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~------~~tCPvCr~~~~ 205 (214)
++...|+||++.|.. ++.++|||.||..||.+|++. ...||+||+.+.
T Consensus 17 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 17 KEEVTCPICLELLTQ---PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCCTTTCSCCSS---CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred cCCCCCCCCCcccCC---ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 456789999999854 456799999999999999987 789999999876
No 33
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.31 E-value=6.3e-13 Score=100.03 Aligned_cols=52 Identities=25% Similarity=0.659 Sum_probs=44.8
Q ss_pred cCCCccccccccccC----CCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDA----ENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~----~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
.++..|+||++.|.. +...+.++|||.||..||.+|++.+.+||+||+.+..
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 60 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTT
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcc
Confidence 456789999999954 3445889999999999999999999999999998864
No 34
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.31 E-value=1.2e-12 Score=87.35 Aligned_cols=51 Identities=24% Similarity=0.627 Sum_probs=40.4
Q ss_pred CCCccccccc-cccCCC-CeEecCCCCcccHHHHHHHHhc-CCcccccccchhh
Q 028051 156 EEDVCPTCLE-EYDAEN-PRIITKCEHHFHLACIFEWMER-SDTCPVCNQVRLK 206 (214)
Q Consensus 156 e~~~C~ICle-~~~~~~-~~~~l~C~H~FH~~CI~~Wl~~-~~tCPvCr~~~~~ 206 (214)
++..|+||++ .|.... ....++|||.||..||.+|+.+ +.+||+||+.+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 4567999999 675433 2356899999999999999765 4679999998853
No 35
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.31 E-value=1.1e-12 Score=96.31 Aligned_cols=50 Identities=28% Similarity=0.624 Sum_probs=42.8
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
+++..|+||++.|.. ++.+++|||.||..||.+|++.+.+||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 13 NPHLMCVLCGGYFID--ATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GGGTBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred CCcCCCccCChHHhC--cCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 467789999999854 44445999999999999999999999999998764
No 36
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.30 E-value=1.4e-12 Score=92.68 Aligned_cols=47 Identities=26% Similarity=0.590 Sum_probs=40.5
Q ss_pred cCCCccccccccccCCCCeEecC-CCCcccHHHHHHHHhcC--Ccccccccch
Q 028051 155 EEEDVCPTCLEEYDAENPRIITK-CEHHFHLACIFEWMERS--DTCPVCNQVR 204 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~-C~H~FH~~CI~~Wl~~~--~tCPvCr~~~ 204 (214)
+++..|+||++.|.. ++.++ |||.||..||.+|+..+ .+||+||+.+
T Consensus 11 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 11 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CTTTEETTTTEECSS---CEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred CcCCCCCCCChhhcC---ceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 567789999999864 55778 99999999999999765 5899999986
No 37
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1e-12 Score=85.31 Aligned_cols=43 Identities=44% Similarity=0.983 Sum_probs=36.3
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHH---hcCCccccc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWM---ERSDTCPVC 200 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl---~~~~tCPvC 200 (214)
++...|+||++.+.. .+.++|||.||..||.+|+ +++.+||+|
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKE---PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSS---CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCc---cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 456789999999865 3568999999999999995 456789998
No 38
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.28 E-value=1.1e-12 Score=98.58 Aligned_cols=49 Identities=27% Similarity=0.434 Sum_probs=42.0
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCC-cccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSD-TCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~-tCPvCr~~~~~ 206 (214)
+++..|+||++.|.. ++.++|||.||..||..|++.+. +||+||+.+..
T Consensus 50 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 50 EETFQCICCQELVFR---PITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHTBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred ccCCCCCcCChHHcC---cEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 456789999999864 66789999999999999998654 99999998854
No 39
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=1.1e-12 Score=90.13 Aligned_cols=50 Identities=20% Similarity=0.573 Sum_probs=42.3
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC--Ccccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS--DTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~--~tCPvCr~~~~~ 206 (214)
+..+.|+||++.+..+ .....|+|.||..||++||+.+ .+||+||+.+..
T Consensus 13 ~~i~~C~IC~~~i~~g--~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 13 DAVKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp SSSCBCSSSCCBCSSS--EECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred CCCCcCcchhhHcccC--CccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 4567899999999753 3455899999999999999888 899999998753
No 40
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.24 E-value=3e-12 Score=96.24 Aligned_cols=54 Identities=24% Similarity=0.594 Sum_probs=45.7
Q ss_pred ccCCCccccccccccC----CCCeEecCCCCcccHHHHHHHHhcCCcccccccchhhh
Q 028051 154 IEEEDVCPTCLEEYDA----ENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKI 207 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~----~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~ 207 (214)
.++...|+||++.|.. ....+.++|||.||..||.+|++.+++||+||+.+...
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 126 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChh
Confidence 3567789999999854 34457889999999999999999999999999988643
No 41
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.22 E-value=4.7e-12 Score=94.34 Aligned_cols=49 Identities=35% Similarity=0.728 Sum_probs=42.3
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCC-cccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSD-TCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~-tCPvCr~~~~~ 206 (214)
+++..|+||++.+.. ++.++|||.||..||.+|++.+. +||+||+.+..
T Consensus 16 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 16 ESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCcCChhhcC---eEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 566789999999864 56789999999999999998775 99999998764
No 42
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.21 E-value=2.7e-12 Score=94.27 Aligned_cols=48 Identities=31% Similarity=0.732 Sum_probs=40.2
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCC---cccccccchhh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSD---TCPVCNQVRLK 206 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~---tCPvCr~~~~~ 206 (214)
+...|+||++.|.. ++.++|||.||..||.+|++.+. +||+||+.+..
T Consensus 20 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKE---PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSS---CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcC---eEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 45579999998854 44689999999999999998764 89999998753
No 43
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.20 E-value=5.2e-12 Score=98.23 Aligned_cols=50 Identities=22% Similarity=0.442 Sum_probs=42.6
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCC-cccccccchhhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSD-TCPVCNQVRLKI 207 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~-tCPvCr~~~~~~ 207 (214)
++...|+||++.|.. ++.++|||.||..||.+|++... +||+||+.+...
T Consensus 76 ~~~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 76 EQSFMCVCCQELVYQ---PVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHHTBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred ccCCEeecCChhhcC---CEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 456789999999854 56789999999999999998765 899999988654
No 44
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.18 E-value=9.6e-12 Score=97.79 Aligned_cols=48 Identities=27% Similarity=0.706 Sum_probs=40.8
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc-CCcccccccchh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-SDTCPVCNQVRL 205 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-~~tCPvCr~~~~ 205 (214)
++..|+||++.|.. ++.+++|||.||..||.+|++. +.+||+||+.+.
T Consensus 53 ~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 53 SELMCPICLDMLKN--TMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HHHBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCCcccChHhhC--cCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 45579999999864 4555599999999999999987 788999999874
No 45
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.18 E-value=1.8e-12 Score=96.04 Aligned_cols=49 Identities=24% Similarity=0.499 Sum_probs=41.7
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc-CCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-SDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-~~tCPvCr~~~~~ 206 (214)
+++..|+||++.|.. ++.++|||.||..||.+|++. +.+||+||+.+..
T Consensus 13 ~~~~~C~iC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVE---PVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSS---CEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCc---eeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 456679999999864 567799999999999999976 6789999998764
No 46
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=99.18 E-value=7e-12 Score=92.97 Aligned_cols=48 Identities=23% Similarity=0.544 Sum_probs=41.4
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc-CCcccccccchhh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-SDTCPVCNQVRLK 206 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-~~tCPvCr~~~~~ 206 (214)
++..|+||++.+.. ++.++|||.||..||.+|++. ..+||+||+.+..
T Consensus 22 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 22 KSISCQICEHILAD---PVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCCcHhcC---cEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 45679999999854 566899999999999999987 7799999998754
No 47
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.17 E-value=2.2e-11 Score=85.84 Aligned_cols=49 Identities=14% Similarity=0.028 Sum_probs=43.7
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
.++..|+||++.+.. +++++|||.|+..||.+|+..+.+||+||+.+..
T Consensus 12 p~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTD---PVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp CTTTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred chheECcccCchhcC---CeECCCCCEECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 567889999999866 6788899999999999999999999999998753
No 48
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.17 E-value=8.2e-12 Score=83.36 Aligned_cols=51 Identities=25% Similarity=0.455 Sum_probs=41.8
Q ss_pred cCCCccccccccccCCCCeEec--CCCCc-ccHHHHHHHHhcCCcccccccchhhhc
Q 028051 155 EEEDVCPTCLEEYDAENPRIIT--KCEHH-FHLACIFEWMERSDTCPVCNQVRLKIF 208 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l--~C~H~-FH~~CI~~Wl~~~~tCPvCr~~~~~~~ 208 (214)
+++..|+||++.+.. ...+ +|||. |+..|+..|++.+..||+||+.+....
T Consensus 6 ~~~~~C~IC~~~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i 59 (64)
T 2vje_A 6 NAIEPCVICQGRPKN---GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 59 (64)
T ss_dssp GGGSCCTTTSSSCSC---EEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEE
T ss_pred CCcCCCCcCCCCCCC---EEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceE
Confidence 355679999997643 3444 99999 899999999999999999999886543
No 49
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=99.15 E-value=1.8e-11 Score=85.00 Aligned_cols=53 Identities=19% Similarity=0.500 Sum_probs=40.9
Q ss_pred ccCCCccccccccccCCCCeEe-cCCCCcccHHHHHHHHh-cCCcccccccchhh
Q 028051 154 IEEEDVCPTCLEEYDAENPRII-TKCEHHFHLACIFEWME-RSDTCPVCNQVRLK 206 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~-l~C~H~FH~~CI~~Wl~-~~~tCPvCr~~~~~ 206 (214)
.+++..|+||++.+...+.... ++|||.||..||.+|++ ....||+||+.+..
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSS
T ss_pred cccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCC
Confidence 3567789999998865433221 35999999999999984 45789999998764
No 50
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.13 E-value=5e-12 Score=82.09 Aligned_cols=46 Identities=20% Similarity=0.391 Sum_probs=39.1
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
++...|+||++.|.. ++.++|||.||..||.+| +..||+||+.+..
T Consensus 4 ~~~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 4 FQFLRCQQCQAEAKC---PKLLPCLHTLCSGCLEAS---GMQCPICQAPWPL 49 (56)
T ss_dssp CCCSSCSSSCSSCBC---CSCSTTSCCSBTTTCSSS---SSSCSSCCSSSSC
T ss_pred ccCCCceEeCCccCC---eEEcCCCCcccHHHHccC---CCCCCcCCcEeec
Confidence 566789999999865 467899999999999885 6789999998753
No 51
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=99.12 E-value=1.9e-11 Score=94.05 Aligned_cols=47 Identities=17% Similarity=0.523 Sum_probs=40.7
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCC-cccccccch
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSD-TCPVCNQVR 204 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~-tCPvCr~~~ 204 (214)
+++..|+||++.+.. ++.++|||.||..||.+|++... +||+||+++
T Consensus 29 ~~~~~C~IC~~~~~~---pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 29 EAKYLCSACRNVLRR---PFQAQCGHRYCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHGGGSCEECHHHHHTT
T ss_pred CcCcCCCCCChhhcC---cEECCCCCccCHHHHHHHHhcCCCCCCCCCCcc
Confidence 567789999999865 46689999999999999998765 899999975
No 52
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.10 E-value=5.7e-11 Score=85.95 Aligned_cols=49 Identities=10% Similarity=-0.021 Sum_probs=43.6
Q ss_pred cCCCccccccccccCCCCeEecCCC-CcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCE-HHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~-H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
.++..||||++.|.. +++++|| |.|+..||.+|+....+||+||+.+..
T Consensus 20 p~~~~CpI~~~~m~d---PV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCD---PVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp CTTTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred cHhcCCcCccccccC---CeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 467889999999866 6788999 999999999999989999999998753
No 53
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.09 E-value=1.4e-11 Score=84.51 Aligned_cols=48 Identities=27% Similarity=0.513 Sum_probs=40.5
Q ss_pred CCCccccccccccCCCCeEecCCCCc-ccHHHHHHHHhcCCcccccccchhhhccc
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHH-FHLACIFEWMERSDTCPVCNQVRLKIFAS 210 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~-FH~~CI~~Wl~~~~tCPvCr~~~~~~~~~ 210 (214)
++..|+||++.+.. .+.++|||. ||..|+..| ..||+||+.+......
T Consensus 23 ~~~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~~~i 71 (74)
T 4ic3_A 23 EEKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV----DKCPMCYTVITFKQKI 71 (74)
T ss_dssp HHTBCTTTSSSBCC---EEEETTCCBCCCHHHHTTC----SBCTTTCCBCSEEEEC
T ss_pred cCCCCCCCCCCCCC---EEEcCCCChhHHHHhhhcC----ccCCCcCcCccCcEEE
Confidence 45679999998754 678899999 999999999 8899999998766543
No 54
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=99.09 E-value=3.1e-11 Score=80.26 Aligned_cols=51 Identities=16% Similarity=0.352 Sum_probs=41.5
Q ss_pred cCCCccccccccccCCCCeEe--cCCCCc-ccHHHHHHHHhcCCcccccccchhhhc
Q 028051 155 EEEDVCPTCLEEYDAENPRII--TKCEHH-FHLACIFEWMERSDTCPVCNQVRLKIF 208 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~--l~C~H~-FH~~CI~~Wl~~~~tCPvCr~~~~~~~ 208 (214)
+....|+||++.... ..+ +||||. |+..|+.+|.+.+..||+||+.+....
T Consensus 5 ~~~~~C~IC~~~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i 58 (63)
T 2vje_B 5 NLLKPCSLCEKRPRD---GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVI 58 (63)
T ss_dssp GGGSBCTTTSSSBSC---EEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEE
T ss_pred CcCCCCcccCCcCCC---eEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceE
Confidence 445679999997633 334 499998 999999999999999999999986544
No 55
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.09 E-value=5.4e-11 Score=86.35 Aligned_cols=49 Identities=14% Similarity=0.015 Sum_probs=43.5
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
.++..||||++.|.. +++++|||.|+..||.+|+....+||+||+.+..
T Consensus 27 p~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 27 PDEFRDPLMDTLMTD---PVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp STTTBCTTTCSBCSS---EEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred cHhhCCcCccCcccC---CeECCCCCEEchHHHHHHHHcCCCCCCCCCCCCh
Confidence 467889999999865 6778899999999999999989999999998753
No 56
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=99.06 E-value=3.7e-11 Score=104.05 Aligned_cols=58 Identities=28% Similarity=0.544 Sum_probs=45.7
Q ss_pred cCCCccccccccccC-CCCe--E--ecCCCCcccHHHHHHHHhcC-----------Ccccccccchhhhccccc
Q 028051 155 EEEDVCPTCLEEYDA-ENPR--I--ITKCEHHFHLACIFEWMERS-----------DTCPVCNQVRLKIFASLV 212 (214)
Q Consensus 155 ee~~~C~ICle~~~~-~~~~--~--~l~C~H~FH~~CI~~Wl~~~-----------~tCPvCr~~~~~~~~~~~ 212 (214)
++...|+||++.+.. +.-+ . ..+|+|.||..||++||+.. ++||+||+.|...++.++
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~sf~~ll 379 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTSFAALL 379 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGGGGGGS
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCccHHHHh
Confidence 456689999999865 2211 1 25899999999999999763 579999999998887764
No 57
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=99.04 E-value=1e-10 Score=103.48 Aligned_cols=49 Identities=24% Similarity=0.582 Sum_probs=42.5
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHh-cCCcccccccchhhh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWME-RSDTCPVCNQVRLKI 207 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~-~~~tCPvCr~~~~~~ 207 (214)
....|+||++.+.. ++.++|||.||..||..|++ .+.+||+||+.+...
T Consensus 331 ~~~~C~ICle~~~~---pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 331 TFQLCKICAENDKD---VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT 380 (389)
T ss_dssp SSSBCTTTSSSBCC---EEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEE
T ss_pred CCCCCCccCcCCCC---eEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCc
Confidence 34689999998844 67899999999999999998 789999999988654
No 58
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.03 E-value=2.5e-11 Score=90.22 Aligned_cols=46 Identities=26% Similarity=0.582 Sum_probs=39.0
Q ss_pred cCCCccccccccccCCCCeEec-CCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIIT-KCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l-~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
+++..|+||++.|.. ++.+ +|||.||..||..|++ ..||+||+.+.
T Consensus 20 ~~~~~C~IC~~~~~~---pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~ 66 (117)
T 1jm7_B 20 EKLLRCSRCTNILRE---PVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAW 66 (117)
T ss_dssp HHTTSCSSSCSCCSS---CBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCS
T ss_pred hhCCCCCCCChHhhC---ccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCc
Confidence 356779999999854 4455 9999999999999998 78999999874
No 59
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.96 E-value=2.7e-10 Score=89.77 Aligned_cols=49 Identities=35% Similarity=0.728 Sum_probs=41.9
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCC-cccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSD-TCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~-tCPvCr~~~~~ 206 (214)
++...|+||++.+.. ++.++|||.||..||.+|++.+. +||+||+.+..
T Consensus 16 ~~~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 16 ESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCChhhcC---cEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 567789999999865 46689999999999999997754 99999998754
No 60
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.95 E-value=4.2e-10 Score=74.17 Aligned_cols=49 Identities=31% Similarity=0.678 Sum_probs=38.4
Q ss_pred ccCCCccccccccccCCCCeEecCCC--C---cccHHHHHHHHhc--CCcccccccchh
Q 028051 154 IEEEDVCPTCLEEYDAENPRIITKCE--H---HFHLACIFEWMER--SDTCPVCNQVRL 205 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l~C~--H---~FH~~CI~~Wl~~--~~tCPvCr~~~~ 205 (214)
++++..|.||+++.+ ++. ++||. | .||..||.+|+.. +.+||+||..+.
T Consensus 3 ~~~~~~CrIC~~~~~--~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 3 DEDVPVCWICNEELG--NER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp TCSCCEETTTTEECS--CCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCEeEEeecCCC--Cce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 356778999999843 333 68865 4 9999999999965 578999998764
No 61
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=3.5e-10 Score=81.02 Aligned_cols=46 Identities=24% Similarity=0.541 Sum_probs=38.5
Q ss_pred cCCCccccccccccCCCCeEec-CCCCcccHHHHHHHHhcC------Ccccc--cccc
Q 028051 155 EEEDVCPTCLEEYDAENPRIIT-KCEHHFHLACIFEWMERS------DTCPV--CNQV 203 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l-~C~H~FH~~CI~~Wl~~~------~tCPv--Cr~~ 203 (214)
.++..||||++.|.. ++++ .|||.|+..||.+||..+ .+||+ |++.
T Consensus 5 ~~~~~CPI~~~~~~d---PV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEMKK---PVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBCSS---EEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchhcC---CEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 567889999999865 5566 599999999999999764 48999 9865
No 62
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=2.1e-10 Score=78.69 Aligned_cols=47 Identities=28% Similarity=0.548 Sum_probs=37.9
Q ss_pred CCCccccccccccCCCCeEecCCCCc-ccHHHHHHHHhcCCcccccccchhhhcc
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHH-FHLACIFEWMERSDTCPVCNQVRLKIFA 209 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~-FH~~CI~~Wl~~~~tCPvCr~~~~~~~~ 209 (214)
++..|+||++.+.. ++.++|||. ||..|+.. ...||+||+.+.....
T Consensus 24 ~~~~C~IC~~~~~~---~~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~~~~ 71 (75)
T 2ecg_A 24 EEKLCKICMDRNIA---IVFVPCGHLVTCKQCAEA----VDKCPMCYTVITFKQK 71 (75)
T ss_dssp HHHSCSSSCSSCCC---BCCSSSCCCCBCHHHHHH----CSBCTTTCCBCCCCCB
T ss_pred CCCCCCcCCCCCCC---EEEecCCCHHHHHHHhhC----CCCCccCCceecCcEE
Confidence 34569999998744 667899999 99999964 4789999999876544
No 63
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.86 E-value=1e-09 Score=92.12 Aligned_cols=48 Identities=17% Similarity=0.060 Sum_probs=41.5
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC-Ccccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS-DTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~-~tCPvCr~~~~ 205 (214)
.+...|+||++.+.. +++++|||.||..||.+|+..+ .+||+||+.+.
T Consensus 206 ~~~~~c~i~~~~~~d---Pv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~ 254 (281)
T 2c2l_A 206 PDYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLT 254 (281)
T ss_dssp CSTTBCTTTCSBCSS---EEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred CcccCCcCcCCHhcC---CeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCc
Confidence 457789999999865 6788999999999999999875 45999999875
No 64
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=1.6e-09 Score=73.06 Aligned_cols=48 Identities=25% Similarity=0.565 Sum_probs=39.4
Q ss_pred cCCCccccccccccCCCCeEecCCCCc-ccHHHHHHHHhcCCcccccccchhhhcc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHH-FHLACIFEWMERSDTCPVCNQVRLKIFA 209 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~-FH~~CI~~Wl~~~~tCPvCr~~~~~~~~ 209 (214)
+++..|.||++.... .+++||||. ||..|+.. ...||+||+.+.....
T Consensus 13 ~~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~~~~ 61 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVN---WVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQESFA 61 (68)
T ss_dssp CCSSCCSSSSSSCCC---CEETTTTBCCSCTTHHHH----CSSCTTTCCCCCCEEC
T ss_pred CCCCCCCCcCcCCCC---EEEECCCChhhhHHHHhc----CCCCCCCCcchhceEE
Confidence 456789999997643 778999999 99999984 5789999998876543
No 65
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.79 E-value=8.7e-10 Score=76.50 Aligned_cols=46 Identities=26% Similarity=0.538 Sum_probs=38.3
Q ss_pred CCCccccccccccCCCCeEecCCCCc-ccHHHHHHHHhcCCcccccccchhhhc
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHH-FHLACIFEWMERSDTCPVCNQVRLKIF 208 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~-FH~~CI~~Wl~~~~tCPvCr~~~~~~~ 208 (214)
++..|+||++.+.. .+.++|||. ||..|+..| ..||+||+.+....
T Consensus 17 ~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~~ 63 (79)
T 2yho_A 17 EAMLCMVCCEEEIN---STFCPCGHTVCCESCAAQL----QSCPVCRSRVEHVQ 63 (79)
T ss_dssp HHTBCTTTSSSBCC---EEEETTCBCCBCHHHHTTC----SBCTTTCCBCCEEE
T ss_pred CCCEeEEeCcccCc---EEEECCCCHHHHHHHHHhc----CcCCCCCchhhCeE
Confidence 35579999997644 778999999 999999988 38999999887543
No 66
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.75 E-value=3.4e-09 Score=75.58 Aligned_cols=48 Identities=29% Similarity=0.653 Sum_probs=39.1
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC--------Ccccc--cccc
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS--------DTCPV--CNQV 203 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~--------~tCPv--Cr~~ 203 (214)
+...|+||++.+.......+++|||.||..||..|++.+ -+||. |++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 456799999999765544556899999999999999642 37999 9987
No 67
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.73 E-value=5.4e-09 Score=83.35 Aligned_cols=49 Identities=16% Similarity=0.059 Sum_probs=42.2
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC-Ccccccccchhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS-DTCPVCNQVRLK 206 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~-~tCPvCr~~~~~ 206 (214)
.+...||||++.+.. +++++|||.|+..||.+|+..+ .+||+|++.+..
T Consensus 104 p~~f~CPI~~elm~D---PV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 104 PDYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cHhhcccCccccCCC---CeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 567899999999865 6778999999999999999874 479999998753
No 68
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.68 E-value=7.6e-09 Score=86.76 Aligned_cols=49 Identities=35% Similarity=0.666 Sum_probs=40.6
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC--Ccccc--cccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS--DTCPV--CNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~--~tCPv--Cr~~~~ 205 (214)
..+..||||++.|.. +++.+.|||.|+..||.+|++.+ .+||+ |++.+.
T Consensus 179 ~~el~CPIcl~~f~D--PVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 179 KIELTCPITCKPYEA--PLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp BCCSBCTTTSSBCSS--EEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred ceeeECcCccCcccC--CeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 456689999999844 55557999999999999999865 57999 998763
No 69
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.60 E-value=1.7e-08 Score=66.52 Aligned_cols=46 Identities=11% Similarity=0.217 Sum_probs=39.6
Q ss_pred CCccccccccccCCCCeEec-CCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 157 EDVCPTCLEEYDAENPRIIT-KCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l-~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
...|+|+++.+.. ++++ ++||.|...||.+||+++++||+.++.+.
T Consensus 3 ~~~CpIs~~~m~d---PV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~ 49 (61)
T 2bay_A 3 HMLCAISGKVPRR---PVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLS 49 (61)
T ss_dssp -CCCTTTCSCCSS---EEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCC
T ss_pred eEEecCCCCCCCC---CEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCC
Confidence 3579999999864 4555 89999999999999999899999999875
No 70
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.58 E-value=8.5e-09 Score=90.19 Aligned_cols=48 Identities=21% Similarity=0.568 Sum_probs=40.5
Q ss_pred cCCCccccccccccCCCCeEecCCCCc-ccHHHHHHHHhcCCcccccccchhhhcc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHH-FHLACIFEWMERSDTCPVCNQVRLKIFA 209 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~-FH~~CI~~Wl~~~~tCPvCr~~~~~~~~ 209 (214)
+++..|+||++.+.. ++.++|||. ||..|+..| ..||+||+.+.....
T Consensus 293 ~~~~~C~IC~~~~~~---~v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~~~~ 341 (345)
T 3t6p_A 293 QEERTCKVCMDKEVS---VVFIPCGHLVVCQECAPSL----RKCPICRGIIKGTVR 341 (345)
T ss_dssp HTTCBCTTTSSSBCC---EEEETTCCEEECTTTGGGC----SBCTTTCCBCCEEEE
T ss_pred cCCCCCCccCCcCCc---eEEcCCCChhHhHHHHhcC----CcCCCCCCCccCeEE
Confidence 456789999998854 677899999 999999998 789999999875543
No 71
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=98.27 E-value=3.6e-07 Score=65.44 Aligned_cols=48 Identities=21% Similarity=0.477 Sum_probs=38.8
Q ss_pred ccccccccccCCCCeEecCCCCcccHHHHHHHHhc-CCcccccccchhhhc
Q 028051 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-SDTCPVCNQVRLKIF 208 (214)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-~~tCPvCr~~~~~~~ 208 (214)
.|.+|--.+.. -.+++||+|.||.+|+..|.++ .++||+|+..+..+.
T Consensus 3 fC~~C~~Pi~i--ygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe 51 (101)
T 3vk6_A 3 FCDKCGLPIKV--YGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIE 51 (101)
T ss_dssp BCTTTCSBCSE--EEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEE
T ss_pred ecCccCCCeEE--EeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeE
Confidence 47888666532 4678999999999999999865 589999999987654
No 72
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.94 E-value=5.4e-06 Score=68.83 Aligned_cols=49 Identities=20% Similarity=0.569 Sum_probs=40.3
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCC--cccccccchhh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSD--TCPVCNQVRLK 206 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~--tCPvCr~~~~~ 206 (214)
.-..|.||.+....+ .....|+|.||..|+.+|++.+. +||.|+..+..
T Consensus 179 ~i~~C~iC~~iv~~g--~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~ 229 (238)
T 3nw0_A 179 AVKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 229 (238)
T ss_dssp TCCBCTTTCSBCSSC--EECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCS
T ss_pred CCCcCcchhhHHhCC--cccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Confidence 466899999988653 55566999999999999998754 99999987653
No 73
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=97.31 E-value=5.1e-05 Score=53.44 Aligned_cols=50 Identities=22% Similarity=0.584 Sum_probs=41.5
Q ss_pred CCCccccccccccCCCCeEecCC-CCcccHHHHHHHHhcCCcccccccchhhhccc
Q 028051 156 EEDVCPTCLEEYDAENPRIITKC-EHHFHLACIFEWMERSDTCPVCNQVRLKIFAS 210 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C-~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~~~~ 210 (214)
....|-.||-+.+. +..| .|.+|+.|+...|.+++.||+|++.+...+.+
T Consensus 27 G~~nCKsCWf~~k~-----LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~ 77 (99)
T 2ko5_A 27 GPQFCKSCWFENKG-----LVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRP 77 (99)
T ss_dssp CCCCCCSSCSCCSS-----EEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCT
T ss_pred CcccChhhccccCC-----eeeecchhhHHHHHHHHHhhccCCcccCCcCCcceec
Confidence 45569999987754 6667 59999999999999999999999998765543
No 74
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=96.20 E-value=0.0027 Score=44.97 Aligned_cols=36 Identities=17% Similarity=0.402 Sum_probs=27.8
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHH-HH
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFE-WM 191 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~-Wl 191 (214)
++..|.||++.|........+.|+|.||..|+.. |.
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc
Confidence 4567999998754434455599999999999998 53
No 75
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=92.90 E-value=0.026 Score=40.75 Aligned_cols=39 Identities=21% Similarity=0.330 Sum_probs=30.1
Q ss_pred ccCCCccccccccccCCCCeEecCCCCcccHHHHHHHHh
Q 028051 154 IEEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWME 192 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~ 192 (214)
..+++.|.||.+..+.++-+....|+..||..|+..++.
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~ 42 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVT 42 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCC
T ss_pred CCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccc
Confidence 457888999998754444355578999999999988764
No 76
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=92.60 E-value=0.062 Score=35.32 Aligned_cols=47 Identities=21% Similarity=0.389 Sum_probs=34.8
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Ccccccccch
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQVR 204 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~~ 204 (214)
.....|.||.+. ++-+..-.|...||..|+...|... =.||.|+...
T Consensus 10 ~~~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 10 APGARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CTTCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 345679999763 4445556799999999999888654 3699997653
No 77
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=91.59 E-value=0.033 Score=37.33 Aligned_cols=53 Identities=21% Similarity=0.383 Sum_probs=36.0
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc----CCcccccccchhhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER----SDTCPVCNQVRLKI 207 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~----~~tCPvCr~~~~~~ 207 (214)
++...|.||......+.-+..-.|.-.||..|+..-+.. .-.||.|+..+.+.
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k~ 72 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKKD 72 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCSC
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhhc
Confidence 345579999887654333344568899999999765432 23599998776543
No 78
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=90.83 E-value=0.039 Score=35.77 Aligned_cols=51 Identities=25% Similarity=0.478 Sum_probs=34.7
Q ss_pred ccCCCccccccccccCCC-CeEecCCCCcccHHHHHHHHh-----cCCcccccccch
Q 028051 154 IEEEDVCPTCLEEYDAEN-PRIITKCEHHFHLACIFEWME-----RSDTCPVCNQVR 204 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~-~~~~l~C~H~FH~~CI~~Wl~-----~~~tCPvCr~~~ 204 (214)
+++...|+||...++.+. -+..-.|..-||..|+.--.. ..-.||.|+..-
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 356777999999885433 233356889999999865332 234699997643
No 79
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=90.05 E-value=0.13 Score=31.68 Aligned_cols=44 Identities=23% Similarity=0.607 Sum_probs=30.5
Q ss_pred ccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Cccccccc
Q 028051 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQ 202 (214)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~ 202 (214)
.|.||....+.+.-+..-.|...||..|+..=|... =.||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 488998765444445556799999999997544322 24998865
No 80
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=90.03 E-value=0.23 Score=34.17 Aligned_cols=35 Identities=26% Similarity=0.571 Sum_probs=24.8
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHH
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEW 190 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~W 190 (214)
..++.|.|| +.|+.+...-.--|+-.||..|+.+-
T Consensus 13 ~~D~~C~VC-~~~t~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 13 VNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CCCcccCcc-ccccccceeccccccccccHhhcccc
Confidence 457789999 44655543223337999999999995
No 81
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=89.72 E-value=0.12 Score=33.27 Aligned_cols=46 Identities=24% Similarity=0.668 Sum_probs=32.8
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc----CCcccccccc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER----SDTCPVCNQV 203 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~----~~tCPvCr~~ 203 (214)
..++.|.||... ++-+..-.|...||..|+..-|.. .=.||.|++.
T Consensus 9 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 9 DHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 556789999873 333444568899999999985533 2369999754
No 82
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=89.58 E-value=0.058 Score=34.55 Aligned_cols=50 Identities=26% Similarity=0.556 Sum_probs=35.7
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Ccccccccchhhh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQVRLKI 207 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~~~~~ 207 (214)
..++.|.||... ++-+..-.|...||..|+..-|... =.||.|...+.+.
T Consensus 3 ~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~~~ 56 (60)
T 2puy_A 3 IHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK 56 (60)
T ss_dssp CCCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHHHHT
T ss_pred CCCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChhhch
Confidence 456789999874 4445556789999999998655332 3599997766543
No 83
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=89.35 E-value=0.048 Score=35.16 Aligned_cols=49 Identities=18% Similarity=0.445 Sum_probs=33.8
Q ss_pred ccCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Ccccccccchh
Q 028051 154 IEEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQVRL 205 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~~~ 205 (214)
+..++.|.||.+. ++-+..-.|...||..|+..-|... =.||.|+....
T Consensus 6 d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 6 DHHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58 (61)
T ss_dssp CSSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred cCCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchh
Confidence 3557789999863 3334445688999999998655432 25999976544
No 84
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.58 E-value=0.051 Score=34.33 Aligned_cols=46 Identities=24% Similarity=0.591 Sum_probs=32.6
Q ss_pred ccCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Cccccccc
Q 028051 154 IEEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQ 202 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~ 202 (214)
+..++.|.||... ++-+..-.|...||..|+..-|... =.||.|..
T Consensus 6 ~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 4567789999874 3445556789999999998655432 24888854
No 85
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=85.17 E-value=0.12 Score=33.78 Aligned_cols=46 Identities=28% Similarity=0.569 Sum_probs=32.7
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Ccccccccc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQV 203 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~ 203 (214)
..++.|.||.+. ++-+..-.|...||..|+..-|... =.||.|...
T Consensus 6 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 6 KNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp SCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 467789999874 4445556789999999998654332 259999653
No 86
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.42 E-value=0.094 Score=36.70 Aligned_cols=49 Identities=16% Similarity=0.521 Sum_probs=34.0
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Ccccccccc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQV 203 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~ 203 (214)
.+...|.||......+.-+..-.|...||..|+..=|... =.||.|+..
T Consensus 14 ~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 14 IDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 5667899999865444445556799999999997433321 249999654
No 87
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=84.15 E-value=0.84 Score=29.64 Aligned_cols=35 Identities=23% Similarity=0.537 Sum_probs=24.2
Q ss_pred ccCCCccccccccccCCCCeEe-c-CCCCcccHHHHH
Q 028051 154 IEEEDVCPTCLEEYDAENPRII-T-KCEHHFHLACIF 188 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~-l-~C~H~FH~~CI~ 188 (214)
.+....|++|...|..+...+. - .|.--||..|+.
T Consensus 5 ~~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 5 SDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp ----CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CCCcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 3556789999999866544433 4 799999999974
No 88
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=82.52 E-value=0.48 Score=30.57 Aligned_cols=49 Identities=27% Similarity=0.563 Sum_probs=32.9
Q ss_pred cCCCccccccccccC--CCCeEecCCCCcccHHHHHHHHh-------cCCcccccccc
Q 028051 155 EEEDVCPTCLEEYDA--ENPRIITKCEHHFHLACIFEWME-------RSDTCPVCNQV 203 (214)
Q Consensus 155 ee~~~C~ICle~~~~--~~~~~~l~C~H~FH~~CI~~Wl~-------~~~tCPvCr~~ 203 (214)
.++..|.||...... +.-+..-.|.-.||..|+..-|. ..=.|+.|...
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 567789999986533 23233356899999999886432 22358888654
No 89
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=82.31 E-value=2 Score=30.71 Aligned_cols=33 Identities=21% Similarity=0.430 Sum_probs=23.9
Q ss_pred CCCccccccccc------cCCCCeEecCCCCcccHHHHH
Q 028051 156 EEDVCPTCLEEY------DAENPRIITKCEHHFHLACIF 188 (214)
Q Consensus 156 e~~~C~ICle~~------~~~~~~~~l~C~H~FH~~CI~ 188 (214)
-...|.+|+..- ..++-+....|+..||..||.
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~ 42 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLK 42 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHT
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhc
Confidence 356799999763 223444557799999999995
No 90
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=82.16 E-value=0.73 Score=31.37 Aligned_cols=39 Identities=18% Similarity=0.309 Sum_probs=28.2
Q ss_pred CCCccccccccccCCCCeEecC-CCCcccHHHHHHHHhcC
Q 028051 156 EEDVCPTCLEEYDAENPRIITK-CEHHFHLACIFEWMERS 194 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~-C~H~FH~~CI~~Wl~~~ 194 (214)
....|.+|.|.++...-+.... =.|.||..|-...+++.
T Consensus 14 a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~q 53 (93)
T 2cs3_A 14 GPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQ 53 (93)
T ss_dssp CSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHH
T ss_pred CeeEeecchhhhccCceeeCCCccCCeeeccccHHHHHhc
Confidence 4567999999987655333111 15999999999999763
No 91
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=81.69 E-value=1.3 Score=33.46 Aligned_cols=48 Identities=23% Similarity=0.425 Sum_probs=34.4
Q ss_pred cccCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhc-----------CCcccccccc
Q 028051 153 VIEEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-----------SDTCPVCNQV 203 (214)
Q Consensus 153 ~~ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-----------~~tCPvCr~~ 203 (214)
.+..++.|.||-+. ++-...-.|...||..||.+-|.+ .=.||+|+..
T Consensus 59 ~Dg~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 59 SDGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TTSCBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 34567889999884 343444578999999999976531 2359999854
No 92
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=80.97 E-value=1.2 Score=43.54 Aligned_cols=48 Identities=13% Similarity=0.046 Sum_probs=41.5
Q ss_pred cCCCccccccccccCCCCeEecCCC-CcccHHHHHHHHhcCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCE-HHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~-H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
-++..|||=++-+.. +++++-| +.|-...|.+||....+||+=|+++.
T Consensus 889 P~~F~cPIs~~lM~D---PVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~ 937 (968)
T 3m62_A 889 PDEFLDPLMYTIMKD---PVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLK 937 (968)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCC
T ss_pred cHHhCCcchhhHHhC---CeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCC
Confidence 467789999998865 7788887 68999999999999999999988875
No 93
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=80.38 E-value=0.27 Score=39.29 Aligned_cols=47 Identities=26% Similarity=0.520 Sum_probs=33.1
Q ss_pred ccCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Ccccccccc
Q 028051 154 IEEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQV 203 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~ 203 (214)
+..++.|.||... ++-+..-.|...||..|+.+.|... =.||.|+..
T Consensus 4 d~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 4 DPNEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDI 54 (207)
T ss_dssp CSSCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCc
Confidence 3566789999864 3323345688999999998766432 369999764
No 94
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=79.68 E-value=1.5 Score=28.98 Aligned_cols=51 Identities=22% Similarity=0.393 Sum_probs=32.6
Q ss_pred cccCCCccccccccc--cCCCCeEecCCCCcccHHHHHHHHh--cCCcccccccc
Q 028051 153 VIEEEDVCPTCLEEY--DAENPRIITKCEHHFHLACIFEWME--RSDTCPVCNQV 203 (214)
Q Consensus 153 ~~ee~~~C~ICle~~--~~~~~~~~l~C~H~FH~~CI~~Wl~--~~~tCPvCr~~ 203 (214)
...+++.|.||.... ..+.-+..-.|.-.||..|+..-.. ..=.||.|+..
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCc
Confidence 346678899998764 2222233356899999999975321 12258888653
No 95
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=77.07 E-value=1.1 Score=30.81 Aligned_cols=50 Identities=22% Similarity=0.371 Sum_probs=32.1
Q ss_pred cCCCccccccccc-cCC-CCeEecCCCCcccHHHHHHHHh--cCCcccccccch
Q 028051 155 EEEDVCPTCLEEY-DAE-NPRIITKCEHHFHLACIFEWME--RSDTCPVCNQVR 204 (214)
Q Consensus 155 ee~~~C~ICle~~-~~~-~~~~~l~C~H~FH~~CI~~Wl~--~~~tCPvCr~~~ 204 (214)
++++.|.||.... ..+ .-+..-.|.-.||..|+..-+. ..=.||.|....
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHT
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCcc
Confidence 5678899998754 112 2233346889999999975331 123599996654
No 96
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=76.43 E-value=2.5 Score=30.94 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=29.2
Q ss_pred ccccccCCCccccccccccCCCCe-EecCCCCcccHHHHHHH
Q 028051 150 VVAVIEEEDVCPTCLEEYDAENPR-IITKCEHHFHLACIFEW 190 (214)
Q Consensus 150 ~~~~~ee~~~C~ICle~~~~~~~~-~~l~C~H~FH~~CI~~W 190 (214)
.+..+.+...|.+|...|..-..+ ..-.||+.||..|....
T Consensus 62 ~W~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~ 103 (125)
T 1joc_A 62 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKN 103 (125)
T ss_dssp CCCCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred ccccCCCCCCCcCcCCccccccccccCCCCCeEEChHHhCCc
Confidence 344445667899999999754333 33579999999997654
No 97
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=76.07 E-value=0.74 Score=31.90 Aligned_cols=47 Identities=21% Similarity=0.622 Sum_probs=33.5
Q ss_pred ccCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Ccccccccc
Q 028051 154 IEEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQV 203 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~ 203 (214)
++.++.|.||... ++-+..-.|.-.||..|+.+=|... =.||.|+..
T Consensus 22 d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 3567789999874 3445556688999999997755432 259999743
No 98
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=75.15 E-value=1.6 Score=29.24 Aligned_cols=49 Identities=24% Similarity=0.389 Sum_probs=31.8
Q ss_pred cCCCccccccccccC-CCCeEecCCCCcccHHHHHHHHh-----cCCcccccccch
Q 028051 155 EEEDVCPTCLEEYDA-ENPRIITKCEHHFHLACIFEWME-----RSDTCPVCNQVR 204 (214)
Q Consensus 155 ee~~~C~ICle~~~~-~~~~~~l~C~H~FH~~CI~~Wl~-----~~~tCPvCr~~~ 204 (214)
.+...| ||...++. +.-+..-.|..-||..|+.--.. ..-.||.|+...
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 344456 99988853 33334456899999999853221 234699998653
No 99
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.51 E-value=0.58 Score=31.52 Aligned_cols=44 Identities=18% Similarity=0.559 Sum_probs=29.3
Q ss_pred ccccccccccCCCCeEecCCCCcccHHHHHHHHhc-----CCccccccc
Q 028051 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-----SDTCPVCNQ 202 (214)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-----~~tCPvCr~ 202 (214)
.|.||...-..+.-+..-.|...||..|+.+=|.. .=.||.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 78999864434443444568999999999854432 125888864
No 100
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=74.44 E-value=2.7 Score=28.90 Aligned_cols=55 Identities=16% Similarity=0.291 Sum_probs=36.6
Q ss_pred cccccCCCccccccccccCCCC-eEecCCCCcccHHHHHHHHh------cCCcccccccchh
Q 028051 151 VAVIEEEDVCPTCLEEYDAENP-RIITKCEHHFHLACIFEWME------RSDTCPVCNQVRL 205 (214)
Q Consensus 151 ~~~~ee~~~C~ICle~~~~~~~-~~~l~C~H~FH~~CI~~Wl~------~~~tCPvCr~~~~ 205 (214)
+..+.+...|.+|...|..-.. ...-.||+.||..|...++. ....|-.|-..+.
T Consensus 14 W~~d~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l~ 75 (90)
T 3t7l_A 14 WVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYETIS 75 (90)
T ss_dssp CCCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHHHHH
T ss_pred CcccccCCcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHHHHH
Confidence 3334566789999999975443 33467999999999876542 1245666655444
No 101
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=73.48 E-value=2.6 Score=36.70 Aligned_cols=45 Identities=22% Similarity=0.414 Sum_probs=30.7
Q ss_pred CccccccccccCCCCeEecCCCCc--ccHHHHHHHHhcC--Ccccccccch
Q 028051 158 DVCPTCLEEYDAENPRIITKCEHH--FHLACIFEWMERS--DTCPVCNQVR 204 (214)
Q Consensus 158 ~~C~ICle~~~~~~~~~~l~C~H~--FH~~CI~~Wl~~~--~tCPvCr~~~ 204 (214)
..|||=+..+ ..+.+-..|.|. |-+.=+....++. -.||+|.+.+
T Consensus 250 L~CPlS~~ri--~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~ 298 (371)
T 3i2d_A 250 LQCPISYTRM--KYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDI 298 (371)
T ss_dssp SBCTTTSSBC--SSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBC
T ss_pred ecCCCccccc--cccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCccc
Confidence 3788877765 457778899998 5544444443333 4699998875
No 102
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=73.40 E-value=0.78 Score=29.35 Aligned_cols=43 Identities=21% Similarity=0.539 Sum_probs=29.2
Q ss_pred CccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCccccc
Q 028051 158 DVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVC 200 (214)
Q Consensus 158 ~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvC 200 (214)
..|--|+..+.....-....|++.||.+|=.---+.=..||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 4599999988432224467899999999933222334678887
No 103
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=73.25 E-value=0.85 Score=32.05 Aligned_cols=45 Identities=20% Similarity=0.305 Sum_probs=30.8
Q ss_pred CCccccccccccCCCCeEecCCCCcccHHHHHHHHhc---CCccccccc
Q 028051 157 EDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER---SDTCPVCNQ 202 (214)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~---~~tCPvCr~ 202 (214)
.-.| ||....+.+.-+..-.|.-.||..|+..=+.. .-.||.|+.
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 3457 88877655554455678999999998753322 236999974
No 104
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=73.18 E-value=0.53 Score=31.04 Aligned_cols=45 Identities=22% Similarity=0.561 Sum_probs=27.5
Q ss_pred ccccccccccCCCCeEecCCCCcccHHHHHHHHhc-----CCcccccccc
Q 028051 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-----SDTCPVCNQV 203 (214)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-----~~tCPvCr~~ 203 (214)
.|.||...-..+.-+..-.|...||..|+..=|.. .=.||.|+..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 46677653323332333468899999999854432 2258888653
No 105
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=72.34 E-value=3.2 Score=30.73 Aligned_cols=53 Identities=21% Similarity=0.340 Sum_probs=35.2
Q ss_pred cccCCCccccccccccCCCCeEecCCCCcccHHHHHHHH------hc-----CCcccccccchhhhc
Q 028051 153 VIEEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWM------ER-----SDTCPVCNQVRLKIF 208 (214)
Q Consensus 153 ~~ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl------~~-----~~tCPvCr~~~~~~~ 208 (214)
.+..++.|.||-+. ++-...-.|-..||..||.+-+ +. .=.|++|+-.-+..+
T Consensus 53 ~Dg~~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~pl~~L 116 (129)
T 3ql9_A 53 SDGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEPLLDL 116 (129)
T ss_dssp TTSCBSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGGGHHH
T ss_pred CCCCCCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHHHHHH
Confidence 34556779999874 3323335688999999999752 21 136999977654433
No 106
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=72.01 E-value=3 Score=36.23 Aligned_cols=45 Identities=27% Similarity=0.501 Sum_probs=31.5
Q ss_pred CccccccccccCCCCeEecCCCCc--ccHHHHHHHHhcC--Ccccccccch
Q 028051 158 DVCPTCLEEYDAENPRIITKCEHH--FHLACIFEWMERS--DTCPVCNQVR 204 (214)
Q Consensus 158 ~~C~ICle~~~~~~~~~~l~C~H~--FH~~CI~~Wl~~~--~tCPvCr~~~ 204 (214)
..|||=+..+ ..+.+-..|.|. |-+.=+..+.+++ -.||+|.+.+
T Consensus 216 L~CPlS~~ri--~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~ 264 (360)
T 4fo9_A 216 LMCPLGKMRL--TIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKA 264 (360)
T ss_dssp SBCTTTCSBC--SSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBC
T ss_pred eeCCCcccee--ccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCccc
Confidence 3699877766 447778899998 6555444444433 4699999876
No 107
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=71.90 E-value=3.7 Score=27.72 Aligned_cols=39 Identities=15% Similarity=0.205 Sum_probs=28.9
Q ss_pred ccccCCCccccccccccCCCCe-EecCCCCcccHHHHHHH
Q 028051 152 AVIEEEDVCPTCLEEYDAENPR-IITKCEHHFHLACIFEW 190 (214)
Q Consensus 152 ~~~ee~~~C~ICle~~~~~~~~-~~l~C~H~FH~~CI~~W 190 (214)
..+.+...|.+|...|..-..+ ..-.||+.||..|....
T Consensus 16 ~pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 16 QEDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp CCTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred ccCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 3345677899999999764433 33569999999997664
No 108
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=71.80 E-value=0.97 Score=29.86 Aligned_cols=46 Identities=26% Similarity=0.482 Sum_probs=28.2
Q ss_pred CCCccccccccccCCCCeEecC--CC-CcccHHHHHHHHhcC----Ccccccccchh
Q 028051 156 EEDVCPTCLEEYDAENPRIITK--CE-HHFHLACIFEWMERS----DTCPVCNQVRL 205 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~--C~-H~FH~~CI~~Wl~~~----~tCPvCr~~~~ 205 (214)
+...| ||..... +.-+..=. |. ..||..||. |... =.||.|+....
T Consensus 15 ~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp SCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCSS
T ss_pred CCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCcccc
Confidence 44567 8988643 33111123 55 589999997 4332 35999977544
No 109
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=71.11 E-value=2.8 Score=28.24 Aligned_cols=40 Identities=20% Similarity=0.375 Sum_probs=28.2
Q ss_pred cccccCCCccccccccccCCCCe-EecCCCCcccHHHHHHH
Q 028051 151 VAVIEEEDVCPTCLEEYDAENPR-IITKCEHHFHLACIFEW 190 (214)
Q Consensus 151 ~~~~ee~~~C~ICle~~~~~~~~-~~l~C~H~FH~~CI~~W 190 (214)
+..+.+...|.+|...|..-..+ ..-.||..||..|....
T Consensus 13 W~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 53 (82)
T 2yw8_A 13 WLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNE 53 (82)
T ss_dssp --CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEE
T ss_pred cccCccCCcccCcCCcccCccccccCCCCCCEEChHHhCCe
Confidence 33445667899999999764433 33569999999997654
No 110
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=70.99 E-value=3.1 Score=29.83 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=23.4
Q ss_pred Ccccccccccc-------CCCCeEecCCCCcccHHHHHHH
Q 028051 158 DVCPTCLEEYD-------AENPRIITKCEHHFHLACIFEW 190 (214)
Q Consensus 158 ~~C~ICle~~~-------~~~~~~~l~C~H~FH~~CI~~W 190 (214)
+.|.||+..-. .++-+....|+..||..|+..+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~ 41 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFT 41 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCCh
Confidence 56999987541 1233444679999999999765
No 111
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=70.19 E-value=0.95 Score=36.82 Aligned_cols=46 Identities=22% Similarity=0.525 Sum_probs=27.5
Q ss_pred CccccccccccCCCCeEecCCCCcccHHHHHHHHhc-----CCcccccccc
Q 028051 158 DVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-----SDTCPVCNQV 203 (214)
Q Consensus 158 ~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-----~~tCPvCr~~ 203 (214)
..|.||...-..+.-+..-.|...||..|+.+=|.. .=.||.|+..
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 368888765444444555678999999999854432 1259999753
No 112
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=69.00 E-value=1.3 Score=30.74 Aligned_cols=46 Identities=26% Similarity=0.482 Sum_probs=28.3
Q ss_pred CCCccccccccccCCCCeEecC--CC-CcccHHHHHHHHhc----CCcccccccchh
Q 028051 156 EEDVCPTCLEEYDAENPRIITK--CE-HHFHLACIFEWMER----SDTCPVCNQVRL 205 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~--C~-H~FH~~CI~~Wl~~----~~tCPvCr~~~~ 205 (214)
+...| ||..... +.-+..=. |. ..||..||. |.. +-.||.|+....
T Consensus 35 e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCS
T ss_pred CCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcCC
Confidence 44557 9988653 33222223 54 579999997 433 236999987543
No 113
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=68.87 E-value=3.9 Score=26.95 Aligned_cols=47 Identities=21% Similarity=0.425 Sum_probs=31.2
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHH---------hcCCcccccccc
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWM---------ERSDTCPVCNQV 203 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl---------~~~~tCPvCr~~ 203 (214)
+...| ||...+..+.-+..-.|..-||..|+.--. ...-.||.|+..
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 34457 898887644434445689999999985211 235679999754
No 114
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=68.82 E-value=2.7 Score=29.85 Aligned_cols=47 Identities=21% Similarity=0.470 Sum_probs=31.6
Q ss_pred CccccccccccCCCCeE-ec-CCCCcccHHHHHHHH----------hcCCcccccccch
Q 028051 158 DVCPTCLEEYDAENPRI-IT-KCEHHFHLACIFEWM----------ERSDTCPVCNQVR 204 (214)
Q Consensus 158 ~~C~ICle~~~~~~~~~-~l-~C~H~FH~~CI~~Wl----------~~~~tCPvCr~~~ 204 (214)
..|+||...|......+ .- .|.--||..|+.--- ..+-.||.|+...
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 46999999985543333 33 688999999985221 0234699997643
No 115
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=68.61 E-value=2.3 Score=31.66 Aligned_cols=49 Identities=18% Similarity=0.405 Sum_probs=33.1
Q ss_pred cCCCcccccccccc-C-CCCeEecCCCCcccHHHHHHHHh-cC---Ccccccccc
Q 028051 155 EEEDVCPTCLEEYD-A-ENPRIITKCEHHFHLACIFEWME-RS---DTCPVCNQV 203 (214)
Q Consensus 155 ee~~~C~ICle~~~-~-~~~~~~l~C~H~FH~~CI~~Wl~-~~---~tCPvCr~~ 203 (214)
..+..|.+|+..|. . +.......|.|.+|..|=..--. .+ =.|=+|++.
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 56778999999994 3 33456688999999998543101 11 148888664
No 116
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=67.47 E-value=1.3 Score=31.64 Aligned_cols=45 Identities=24% Similarity=0.637 Sum_probs=29.9
Q ss_pred Cccccccccc-cCCCCeEecCCCCcccHHHHHHHHhcC----Cccccccc
Q 028051 158 DVCPTCLEEY-DAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQ 202 (214)
Q Consensus 158 ~~C~ICle~~-~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~ 202 (214)
..|.||.... ..+.-+..-.|...||..|+.+-|... =.||.|+.
T Consensus 62 ~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 3688888643 223334445689999999997655432 36998875
No 117
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=66.93 E-value=2 Score=26.33 Aligned_cols=43 Identities=16% Similarity=0.393 Sum_probs=28.0
Q ss_pred ccccccccccCCCCeEe-c-CCCCcccHHHHHHHH----hcCCcccccc
Q 028051 159 VCPTCLEEYDAENPRII-T-KCEHHFHLACIFEWM----ERSDTCPVCN 201 (214)
Q Consensus 159 ~C~ICle~~~~~~~~~~-l-~C~H~FH~~CI~~Wl----~~~~tCPvCr 201 (214)
.|.||...+..+...+. - .|.--||..|+.--. ..+-.||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 37889888854443333 4 588899999976322 2455688875
No 118
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=66.29 E-value=1 Score=33.03 Aligned_cols=50 Identities=18% Similarity=0.499 Sum_probs=32.5
Q ss_pred cCCCccccccccccCCCC-eEecCCCCcccHHHHHHHHhcCCcccccccch
Q 028051 155 EEEDVCPTCLEEYDAENP-RIITKCEHHFHLACIFEWMERSDTCPVCNQVR 204 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~-~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~ 204 (214)
.+...|.+|...|..-.. ...-.||..||..|....+.....|-.|-..+
T Consensus 17 ~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~~~ 67 (120)
T 1y02_A 17 GLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQRFR 67 (120)
T ss_dssp ---CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHHHH
T ss_pred cccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHHHH
Confidence 445679999999965332 23367999999999887776677788885443
No 119
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=66.11 E-value=6.9 Score=27.03 Aligned_cols=51 Identities=16% Similarity=0.374 Sum_probs=35.4
Q ss_pred CCCccccccccccC---CCC-eEecCCCCcccHHHHHH-HHhcCCcccccccchhh
Q 028051 156 EEDVCPTCLEEYDA---ENP-RIITKCEHHFHLACIFE-WMERSDTCPVCNQVRLK 206 (214)
Q Consensus 156 e~~~C~ICle~~~~---~~~-~~~l~C~H~FH~~CI~~-Wl~~~~tCPvCr~~~~~ 206 (214)
...+|.||=+++.. ++. +..--|+--.|..|+.- +-+.+..||.|+..+-.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcccc
Confidence 45689999998733 222 22345787889999754 44567899999987753
No 120
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=66.04 E-value=4.4 Score=26.37 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=26.2
Q ss_pred ccCCCccccccccccCCCCeEecCC-CCcccHHHHHHH
Q 028051 154 IEEEDVCPTCLEEYDAENPRIITKC-EHHFHLACIFEW 190 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l~C-~H~FH~~CI~~W 190 (214)
.++..-|.||.+. ..++.+.| +-.||..|..+-
T Consensus 5 ~ee~pWC~ICneD----AtlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 5 SSGLPWCCICNED----ATLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp CCCCSSCTTTCSC----CCEEETTTTSEEECSSHHHHH
T ss_pred CcCCCeeEEeCCC----CeEEecCCCCceehHHHHHHH
Confidence 3566679999985 34788999 899999998774
No 121
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=65.95 E-value=3.6 Score=31.32 Aligned_cols=47 Identities=21% Similarity=0.444 Sum_probs=33.5
Q ss_pred CCCccccccccc--cCCCCeEecCCCCcccHHHHHHHHhcC--Ccccccccc
Q 028051 156 EEDVCPTCLEEY--DAENPRIITKCEHHFHLACIFEWMERS--DTCPVCNQV 203 (214)
Q Consensus 156 e~~~C~ICle~~--~~~~~~~~l~C~H~FH~~CI~~Wl~~~--~tCPvCr~~ 203 (214)
.+..|.+|+..| -.+.......|.|.+|..|= .|+... =.|=+|.+.
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~-~~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS-HAHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE-ECCSSSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc-cccCCCCcEeeHHHHHH
Confidence 567899999987 33445677889999999996 244322 247788654
No 122
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=65.43 E-value=1.4 Score=33.79 Aligned_cols=48 Identities=19% Similarity=0.412 Sum_probs=31.4
Q ss_pred cCCCccccccccccC-CCCeEecCCCCcccHHHHHHHH-----hcCCcccccccc
Q 028051 155 EEEDVCPTCLEEYDA-ENPRIITKCEHHFHLACIFEWM-----ERSDTCPVCNQV 203 (214)
Q Consensus 155 ee~~~C~ICle~~~~-~~~~~~l~C~H~FH~~CI~~Wl-----~~~~tCPvCr~~ 203 (214)
++...| ||...++. +.-+..-.|...||..|+.--. ...-.||.|+..
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 456678 99988753 3333445689999999995321 123469999764
No 123
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.04 E-value=5.1 Score=26.99 Aligned_cols=38 Identities=16% Similarity=0.311 Sum_probs=27.6
Q ss_pred cccCCCccccccccccCCCCe-EecCCCCcccHHHHHHH
Q 028051 153 VIEEEDVCPTCLEEYDAENPR-IITKCEHHFHLACIFEW 190 (214)
Q Consensus 153 ~~ee~~~C~ICle~~~~~~~~-~~l~C~H~FH~~CI~~W 190 (214)
.+.+...|.+|...|..-..+ -.-.||.+||..|....
T Consensus 10 pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 48 (84)
T 1x4u_A 10 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFK 48 (84)
T ss_dssp SCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEE
T ss_pred cCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCCc
Confidence 345667899999999654333 23569999999997653
No 124
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=64.72 E-value=1.7 Score=29.77 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=33.8
Q ss_pred cCCCccccccccccC-CCC-eEecCCCCcccHHHHHHHHhc--------CCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDA-ENP-RIITKCEHHFHLACIFEWMER--------SDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~-~~~-~~~l~C~H~FH~~CI~~Wl~~--------~~tCPvCr~~~~ 205 (214)
+++..|.||...-.. ++. +..-.|...||..|+..-|.. .=.|+.|+....
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 346789999986432 222 233468999999999875532 235999976543
No 125
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=64.49 E-value=4.8 Score=27.54 Aligned_cols=53 Identities=15% Similarity=0.344 Sum_probs=35.6
Q ss_pred ccCCCccccccccccCCCCeEe-cCCCCcccHHHHHHHH-------hcCCcccccccchhh
Q 028051 154 IEEEDVCPTCLEEYDAENPRII-TKCEHHFHLACIFEWM-------ERSDTCPVCNQVRLK 206 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~-l~C~H~FH~~CI~~Wl-------~~~~tCPvCr~~~~~ 206 (214)
..+...|.+|...|..-..+.. -.||++||..|....+ +....|-.|-..+..
T Consensus 6 ~~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l~~ 66 (88)
T 1wfk_A 6 SGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILTR 66 (88)
T ss_dssp CCCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHHHH
T ss_pred CCcCCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHHHh
Confidence 3566789999999976543333 5699999999976543 122456666555543
No 126
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=60.04 E-value=0.91 Score=32.71 Aligned_cols=48 Identities=15% Similarity=0.434 Sum_probs=31.9
Q ss_pred ccccccccccCCCCeEecCCCCcccHHHHHHHHhcC----Ccccccccchhh
Q 028051 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQVRLK 206 (214)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~~~~ 206 (214)
.|.||...-..+.-+..-.|...||..|+.+=|... =.||.|+..+..
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~~ 111 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLKE 111 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccchhhc
Confidence 588887754444444446789999999998544322 249999765543
No 127
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=59.34 E-value=2.1 Score=24.14 Aligned_cols=14 Identities=29% Similarity=0.890 Sum_probs=9.9
Q ss_pred CCCccccccccccC
Q 028051 156 EEDVCPTCLEEYDA 169 (214)
Q Consensus 156 e~~~C~ICle~~~~ 169 (214)
+...||||+..+..
T Consensus 4 EGFiCP~C~~~l~s 17 (34)
T 3mjh_B 4 EGFICPQCMKSLGS 17 (34)
T ss_dssp EEEECTTTCCEESS
T ss_pred cccCCcHHHHHcCC
Confidence 45778888877644
No 128
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=58.75 E-value=0.98 Score=30.40 Aligned_cols=44 Identities=23% Similarity=0.586 Sum_probs=26.6
Q ss_pred ccccccccccCCCCeEecCCCCcccHHHHHHHHhcC-----Cccccccc
Q 028051 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS-----DTCPVCNQ 202 (214)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~-----~tCPvCr~ 202 (214)
.|.||...-+.+.-+..-.|...||..|+..-|... =.||.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 466665543322223334688999999998655432 25888875
No 129
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=57.44 E-value=1.3 Score=31.72 Aligned_cols=31 Identities=19% Similarity=0.356 Sum_probs=20.6
Q ss_pred eEecCCCCcccHHHHHHHHhcCCcccccccchhhhc
Q 028051 173 RIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKIF 208 (214)
Q Consensus 173 ~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~~ 208 (214)
.....||+.| .+-+.....||.|+.+-+...
T Consensus 68 ~~C~~CG~~F-----~~~~~kPsrCP~CkSe~Ie~P 98 (105)
T 2gmg_A 68 AQCRKCGFVF-----KAEINIPSRCPKCKSEWIEEP 98 (105)
T ss_dssp CBBTTTCCBC-----CCCSSCCSSCSSSCCCCBCCC
T ss_pred cChhhCcCee-----cccCCCCCCCcCCCCCccCCc
Confidence 3456699999 122344578999998766543
No 130
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=57.03 E-value=8.9 Score=25.04 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=25.2
Q ss_pred CCccccccccccCCCCe-EecCCCCcccHHHHHHH
Q 028051 157 EDVCPTCLEEYDAENPR-IITKCEHHFHLACIFEW 190 (214)
Q Consensus 157 ~~~C~ICle~~~~~~~~-~~l~C~H~FH~~CI~~W 190 (214)
+..|.+|...|..-..+ -.-.||+.||..|....
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~ 45 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNS 45 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEE
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccCCe
Confidence 45799999999654333 23569999999997643
No 131
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=52.57 E-value=6.4 Score=25.54 Aligned_cols=47 Identities=17% Similarity=0.422 Sum_probs=30.7
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHh---cCCccccccc
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWME---RSDTCPVCNQ 202 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~---~~~tCPvCr~ 202 (214)
.+...| ||...+..+.-+..-.|..-||..|+.---. ..-.||.|+.
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 445568 9988776433344456899999999864221 2246888864
No 132
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=51.26 E-value=2.6 Score=26.60 Aligned_cols=43 Identities=28% Similarity=0.542 Sum_probs=26.0
Q ss_pred CCCccccccccccCCCCeEecC--CC-CcccHHHHHHHHhcC----Cccccccc
Q 028051 156 EEDVCPTCLEEYDAENPRIITK--CE-HHFHLACIFEWMERS----DTCPVCNQ 202 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~--C~-H~FH~~CI~~Wl~~~----~tCPvCr~ 202 (214)
+...| ||..... +.-+..=. |. .-||..|+. |... =.||.|++
T Consensus 8 e~~yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 8 EPTYC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCcEE-ECCCCCC-CCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 34456 9988653 32122233 55 689999997 4332 35998865
No 133
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=49.80 E-value=6.5 Score=28.03 Aligned_cols=42 Identities=24% Similarity=0.596 Sum_probs=27.2
Q ss_pred cCCCccccccccccCCCCeEe-c--CCCCcccHHHHHHHHhcC----Cccccccc
Q 028051 155 EEEDVCPTCLEEYDAENPRII-T--KCEHHFHLACIFEWMERS----DTCPVCNQ 202 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~-l--~C~H~FH~~CI~~Wl~~~----~tCPvCr~ 202 (214)
++++.|.+|.+. ++ ++. - .|...||..|+. |... =.||-|.-
T Consensus 13 ~~~~~C~~C~~~---G~-ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C 61 (107)
T 4gne_A 13 MHEDYCFQCGDG---GE-LVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQC 61 (107)
T ss_dssp SSCSSCTTTCCC---SE-EEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBC
T ss_pred CCCCCCCcCCCC---Cc-EeEECCCCCCcccccccCc--CCcCCCCCEECCCCCC
Confidence 567789999842 33 333 2 488999999997 5432 24775543
No 134
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=48.59 E-value=13 Score=24.58 Aligned_cols=48 Identities=17% Similarity=0.391 Sum_probs=30.3
Q ss_pred CCCccccccccccCCCCeEec--CCCCcccHHHHHHHHh---------cCCcccccccch
Q 028051 156 EEDVCPTCLEEYDAENPRIIT--KCEHHFHLACIFEWME---------RSDTCPVCNQVR 204 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l--~C~H~FH~~CI~~Wl~---------~~~tCPvCr~~~ 204 (214)
+...| ||......+.-+..- .|..-||..|+.---+ .+-.||.|+...
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 34567 898864444323334 6999999999863211 234699997653
No 135
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=48.37 E-value=9.2 Score=30.38 Aligned_cols=35 Identities=23% Similarity=0.476 Sum_probs=26.3
Q ss_pred CCCccccccccccCCCCe-EecCCCCcccHHHHHHH
Q 028051 156 EEDVCPTCLEEYDAENPR-IITKCEHHFHLACIFEW 190 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~-~~l~C~H~FH~~CI~~W 190 (214)
++..|.+|...|..-..+ ..-.||+.||..|....
T Consensus 160 ~~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~ 195 (220)
T 1dvp_A 160 DGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 195 (220)
T ss_dssp CCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred CCCccCCCCCccCCcccccccCCcCCEEChHHhCCe
Confidence 457899999999654433 33569999999997654
No 136
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=48.23 E-value=10 Score=30.40 Aligned_cols=37 Identities=14% Similarity=0.379 Sum_probs=27.5
Q ss_pred cCCCccccccccccCCCC-eEecCCCCcccHHHHHHHH
Q 028051 155 EEEDVCPTCLEEYDAENP-RIITKCEHHFHLACIFEWM 191 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~-~~~l~C~H~FH~~CI~~Wl 191 (214)
.+.+.|.+|...|..-.. ...-.||+.||..|-..++
T Consensus 162 ~~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~~ 199 (226)
T 3zyq_A 162 VDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYS 199 (226)
T ss_dssp CCCSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEEE
T ss_pred ccCCCCcCcCCCCCccccccccCCCcCEeChhhcCCcc
Confidence 345689999999976443 3346799999999977543
No 137
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=48.11 E-value=3.1 Score=26.34 Aligned_cols=43 Identities=28% Similarity=0.566 Sum_probs=25.4
Q ss_pred CCCccccccccccCCCCeEecC--CC-CcccHHHHHHHHhcC----Cccccccc
Q 028051 156 EEDVCPTCLEEYDAENPRIITK--CE-HHFHLACIFEWMERS----DTCPVCNQ 202 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~--C~-H~FH~~CI~~Wl~~~----~tCPvCr~ 202 (214)
+...| ||..... +.-+..-. |. ..||..|+. |... =.||.|++
T Consensus 9 e~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 34456 9988643 32111123 44 679999997 4332 35888864
No 138
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=45.37 E-value=4.9 Score=21.11 Aligned_cols=11 Identities=45% Similarity=1.047 Sum_probs=7.8
Q ss_pred cccccccchhh
Q 028051 196 TCPVCNQVRLK 206 (214)
Q Consensus 196 tCPvCr~~~~~ 206 (214)
.||+|.+.|..
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 48888876653
No 139
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=45.15 E-value=4.5 Score=35.21 Aligned_cols=52 Identities=12% Similarity=0.201 Sum_probs=0.0
Q ss_pred cccCCCccccccccccCCCC-eEecCCCCcccHHHHHHHHh-------cCCcccccccch
Q 028051 153 VIEEEDVCPTCLEEYDAENP-RIITKCEHHFHLACIFEWME-------RSDTCPVCNQVR 204 (214)
Q Consensus 153 ~~ee~~~C~ICle~~~~~~~-~~~l~C~H~FH~~CI~~Wl~-------~~~tCPvCr~~~ 204 (214)
.+.+...|.+|...|..-.. ...-.||+.||..|...++. ....|-.|-..+
T Consensus 371 ~~~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l 430 (434)
T 3mpx_A 371 PVTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGEL 430 (434)
T ss_dssp ------------------------------------------------------------
T ss_pred CcccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHH
Confidence 33556789999999965322 23456999999999987652 124566664443
No 140
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=44.66 E-value=12 Score=28.54 Aligned_cols=37 Identities=14% Similarity=0.302 Sum_probs=26.2
Q ss_pred ccCCCccccccccccCCCCeEec--CCCCcccHHHHHHHHhc
Q 028051 154 IEEEDVCPTCLEEYDAENPRIIT--KCEHHFHLACIFEWMER 193 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l--~C~H~FH~~CI~~Wl~~ 193 (214)
+..+.-|.||-+. ++....- .|...||..||..++..
T Consensus 76 DG~~~yC~wC~~G---g~l~~Cdn~~C~r~FC~~CI~~nvG~ 114 (159)
T 3a1b_A 76 DGYQSYCTICCGG---REVLMCGNNNCCRCFCVECVDLLVGP 114 (159)
T ss_dssp TSSBSSCTTTSCC---SEEEECSSTTTCCEEEHHHHHHHTCT
T ss_pred CCCcceeeEecCC---CeEEeeCCCCCCCchhHHHHHHhcCH
Confidence 3446679999763 3323333 58899999999999854
No 141
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=44.56 E-value=9.3 Score=26.90 Aligned_cols=12 Identities=25% Similarity=0.844 Sum_probs=10.7
Q ss_pred ccHHHHHHHHhc
Q 028051 182 FHLACIFEWMER 193 (214)
Q Consensus 182 FH~~CI~~Wl~~ 193 (214)
||..|+.+|+..
T Consensus 43 FCRNCLskWy~~ 54 (105)
T 2o35_A 43 FCRNCLSNWYRE 54 (105)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999953
No 142
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=44.23 E-value=9.5 Score=26.81 Aligned_cols=11 Identities=27% Similarity=0.951 Sum_probs=10.4
Q ss_pred ccHHHHHHHHh
Q 028051 182 FHLACIFEWME 192 (214)
Q Consensus 182 FH~~CI~~Wl~ 192 (214)
||..|+.+|+.
T Consensus 42 FCRNCLskWy~ 52 (104)
T 3fyb_A 42 FCRNCLAKWLM 52 (104)
T ss_dssp CCHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999995
No 143
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=41.20 E-value=10 Score=26.71 Aligned_cols=44 Identities=20% Similarity=0.547 Sum_probs=28.1
Q ss_pred ccccccccccCCCCeEecCCCCcccHHHHHHHHhc----CCccccccc
Q 028051 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER----SDTCPVCNQ 202 (214)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~----~~tCPvCr~ 202 (214)
.|.||...-+...-+..-.|...||..|+.+=|.. .=.||.|+.
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHC
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcC
Confidence 57777765433333444568999999999864432 225887754
No 144
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=41.08 E-value=16 Score=23.91 Aligned_cols=47 Identities=26% Similarity=0.398 Sum_probs=29.6
Q ss_pred CCccccccccccCC-CCeEecCCCCcccHHHHHHHHh-----cCCcccccccc
Q 028051 157 EDVCPTCLEEYDAE-NPRIITKCEHHFHLACIFEWME-----RSDTCPVCNQV 203 (214)
Q Consensus 157 ~~~C~ICle~~~~~-~~~~~l~C~H~FH~~CI~~Wl~-----~~~tCPvCr~~ 203 (214)
+.+--||...++.+ .-+..-.|.--||..|+.---. ..-.||.|+..
T Consensus 9 ~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 9 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 33344898877533 3233356899999999954221 23469999754
No 145
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=40.32 E-value=21 Score=31.17 Aligned_cols=47 Identities=17% Similarity=0.392 Sum_probs=32.9
Q ss_pred ccCCCccccccccccCCCCeEec--CCCCcccHHHHHHHHhcC----------Ccccccccc
Q 028051 154 IEEEDVCPTCLEEYDAENPRIIT--KCEHHFHLACIFEWMERS----------DTCPVCNQV 203 (214)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l--~C~H~FH~~CI~~Wl~~~----------~tCPvCr~~ 203 (214)
+.-+.-|.||-+. ++-...- .|...||..||..++.+. =.|=+|.-.
T Consensus 90 DG~~~yCr~C~~G---g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 90 DGYQSYCSICCSG---ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp SSSBCSCTTTCCC---SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CCCcccceEcCCC---CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 3445679999873 3445555 799999999999998332 257777543
No 146
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=39.15 E-value=21 Score=22.61 Aligned_cols=48 Identities=19% Similarity=0.454 Sum_probs=34.1
Q ss_pred cCCCcccccccc-ccCCCCeEecCCCCcccHHHHHHHHhcCC----ccccccc
Q 028051 155 EEEDVCPTCLEE-YDAENPRIITKCEHHFHLACIFEWMERSD----TCPVCNQ 202 (214)
Q Consensus 155 ee~~~C~ICle~-~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~----tCPvCr~ 202 (214)
.+..+|.||+-. |..+.-.+...|.-.||..|=.+|-.+++ .|-+||+
T Consensus 7 ~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k 59 (62)
T 2a20_A 7 GDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRK 59 (62)
T ss_dssp SCCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHH
T ss_pred CCcchhhhhccceeccCCCccccccCCeeecccCCEeeecCCeEEEEehhhhh
Confidence 567789999975 56666677778888888888766653332 3777765
No 147
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=38.68 E-value=8.8 Score=24.92 Aligned_cols=47 Identities=19% Similarity=0.216 Sum_probs=30.2
Q ss_pred CCCccccccccccCCC-CeEecCCCCcccHHHHHHHH----hcCCcccccccc
Q 028051 156 EEDVCPTCLEEYDAEN-PRIITKCEHHFHLACIFEWM----ERSDTCPVCNQV 203 (214)
Q Consensus 156 e~~~C~ICle~~~~~~-~~~~l~C~H~FH~~CI~~Wl----~~~~tCPvCr~~ 203 (214)
+...| ||...++.+. -+..-.|..-||..|+.--- ...-.||.|+..
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 34468 7988765443 33345688999999986432 123469999653
No 148
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=37.62 E-value=7.2 Score=20.94 Aligned_cols=11 Identities=27% Similarity=0.561 Sum_probs=8.1
Q ss_pred Ccccccccchh
Q 028051 195 DTCPVCNQVRL 205 (214)
Q Consensus 195 ~tCPvCr~~~~ 205 (214)
-+||+|+..+.
T Consensus 4 ~~CpvCk~q~P 14 (28)
T 2jvx_A 4 FCCPKCQYQAP 14 (28)
T ss_dssp EECTTSSCEES
T ss_pred ccCccccccCc
Confidence 46899987664
No 149
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=35.82 E-value=3.5 Score=26.17 Aligned_cols=37 Identities=22% Similarity=0.613 Sum_probs=24.1
Q ss_pred CCccccccccccC--C-CCeEecC--CCCcccHHHHHHHHhc
Q 028051 157 EDVCPTCLEEYDA--E-NPRIITK--CEHHFHLACIFEWMER 193 (214)
Q Consensus 157 ~~~C~ICle~~~~--~-~~~~~l~--C~H~FH~~CI~~Wl~~ 193 (214)
...||-|.-.++- + +...... |++.|+-.|..+|-..
T Consensus 6 ~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~~~ 47 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPH 47 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGGG
T ss_pred ceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCcccC
Confidence 3468888776633 2 2223334 8899999999888644
No 150
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.70 E-value=24 Score=22.73 Aligned_cols=40 Identities=18% Similarity=0.399 Sum_probs=28.0
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
.....|..|-..+... .+.--+..||..|. +|-.|++.|.
T Consensus 13 ~~~~~C~~C~~~I~~~---~~~a~~~~~H~~CF--------~C~~C~~~L~ 52 (79)
T 1x62_A 13 QKLPMCDKCGTGIVGV---FVKLRDRHRHPECY--------VCTDCGTNLK 52 (79)
T ss_dssp CCCCCCSSSCCCCCSS---CEECSSCEECTTTT--------SCSSSCCCHH
T ss_pred CCCCccccCCCCccCc---EEEECcceeCcCcC--------eeCCCCCCCC
Confidence 3456799999887642 23345788998884 4788887775
No 151
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=33.24 E-value=3.3 Score=27.75 Aligned_cols=14 Identities=21% Similarity=0.520 Sum_probs=13.0
Q ss_pred CCCCcccHHHHHHH
Q 028051 177 KCEHHFHLACIFEW 190 (214)
Q Consensus 177 ~C~H~FH~~CI~~W 190 (214)
.|+|.||..|-..|
T Consensus 55 ~C~~~FC~~C~~~w 68 (80)
T 2jmo_A 55 GCGFAFCRECKEAY 68 (80)
T ss_dssp CCSCCEETTTTEEC
T ss_pred CCCCeeccccCccc
Confidence 69999999999988
No 152
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=31.66 E-value=20 Score=19.17 Aligned_cols=19 Identities=11% Similarity=0.244 Sum_probs=13.0
Q ss_pred cCCcccccccchhhhcccc
Q 028051 193 RSDTCPVCNQVRLKIFASL 211 (214)
Q Consensus 193 ~~~tCPvCr~~~~~~~~~~ 211 (214)
.+..||.|.+.+....+++
T Consensus 2 m~~~C~~C~k~Vy~~Ek~~ 20 (31)
T 1zfo_A 2 MNPNCARCGKIVYPTEKVN 20 (31)
T ss_dssp CCCBCSSSCSBCCGGGCCC
T ss_pred CCCcCCccCCEEecceeEE
Confidence 3567999988876555443
No 153
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=31.57 E-value=21 Score=22.23 Aligned_cols=43 Identities=16% Similarity=0.410 Sum_probs=28.8
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhhh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLKI 207 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~~ 207 (214)
....|..|-..+...+.. +..=+..||..|. +|-.|++.+...
T Consensus 10 ~~~~C~~C~~~i~~~e~~-~~~~~~~~H~~CF--------~C~~C~~~L~~~ 52 (72)
T 3f6q_B 10 ASATCERCKGGFAPAEKI-VNSNGELYHEQCF--------VCAQCFQQFPEG 52 (72)
T ss_dssp TTCBCTTTCCBCCTTCEE-EEETTEEEETTTS--------SCTTTCCCCGGG
T ss_pred CCccchhcCccccCCceE-EEeCcCeeCcCCC--------cccCCCCCCCCC
Confidence 455799999887654432 2335677888875 478888777543
No 154
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.70 E-value=25 Score=22.41 Aligned_cols=40 Identities=18% Similarity=0.440 Sum_probs=24.2
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
....|..|-..+..++.+. --+..||..|. +|-.|++.|.
T Consensus 8 ~~~~C~~C~~~I~~~~~v~--a~~~~~H~~CF--------~C~~C~~~L~ 47 (76)
T 2cu8_A 8 MASKCPKCDKTVYFAEKVS--SLGKDWHKFCL--------KCERCSKTLT 47 (76)
T ss_dssp CCCBCTTTCCBCCTTTEEE--ETTEEEETTTC--------BCSSSCCBCC
T ss_pred CCCCCcCCCCEeECCeEEE--ECCeEeeCCCC--------CCCCCCCccC
Confidence 3456888888776444222 34667777663 3666766654
No 155
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.66 E-value=28 Score=23.20 Aligned_cols=33 Identities=18% Similarity=0.449 Sum_probs=24.4
Q ss_pred cCCCccccccccccC--CCCeEecCCCCcccHHHH
Q 028051 155 EEEDVCPTCLEEYDA--ENPRIITKCEHHFHLACI 187 (214)
Q Consensus 155 ee~~~C~ICle~~~~--~~~~~~l~C~H~FH~~CI 187 (214)
..+..|..|++.+.. ........|.|..|..|=
T Consensus 23 ~~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Cr 57 (76)
T 2csz_A 23 YSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCR 57 (76)
T ss_dssp CCCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSE
T ss_pred CCccchhhhCccccccccCCCcCcccChhhccccc
Confidence 456789999999843 234456779999988883
No 156
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.40 E-value=34 Score=22.22 Aligned_cols=40 Identities=20% Similarity=0.613 Sum_probs=25.1
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
....|..|-..+..++.+.. =+..||..|. +|-.|++.|.
T Consensus 14 ~~~~C~~C~~~I~~~~~v~a--~~~~wH~~CF--------~C~~C~~~L~ 53 (80)
T 2dj7_A 14 GPSHCAGCKEEIKHGQSLLA--LDKQWHVSCF--------KCQTCSVILT 53 (80)
T ss_dssp SCSCCTTTCCCCSSSCCEEE--TTEEECTTTC--------BCSSSCCBCS
T ss_pred CCCCCcCcCCeeCCCeEEEE--CCcccccccC--------CcCcCCCCcC
Confidence 45678888887754443333 3667777763 3667766654
No 157
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=30.19 E-value=9 Score=22.99 Aligned_cols=8 Identities=50% Similarity=1.306 Sum_probs=6.3
Q ss_pred cccccccc
Q 028051 196 TCPVCNQV 203 (214)
Q Consensus 196 tCPvCr~~ 203 (214)
.||+|...
T Consensus 32 ~CP~Cg~~ 39 (46)
T 6rxn_A 32 CCPVCGVS 39 (46)
T ss_dssp BCTTTCCB
T ss_pred cCcCCCCc
Confidence 79999764
No 158
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=29.92 E-value=7.3 Score=26.28 Aligned_cols=35 Identities=23% Similarity=0.602 Sum_probs=21.3
Q ss_pred ccccccccc--CCCC-eEecCCCCcccHHHHHHHHhcC
Q 028051 160 CPTCLEEYD--AENP-RIITKCEHHFHLACIFEWMERS 194 (214)
Q Consensus 160 C~ICle~~~--~~~~-~~~l~C~H~FH~~CI~~Wl~~~ 194 (214)
||-|-..+. .+.. +....|++.||..|-..|=+.+
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w~~~H 65 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQH 65 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCTTT
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCCchhhcC
Confidence 776644331 1222 3344599999999988884333
No 159
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=29.43 E-value=13 Score=28.01 Aligned_cols=28 Identities=18% Similarity=0.408 Sum_probs=19.0
Q ss_pred eEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 173 RIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 173 ~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
.+...|||.|-.. .....||.|...+..
T Consensus 133 y~C~~Cg~~~~~~------~~~~~Cp~CG~~~~~ 160 (165)
T 2lcq_A 133 YVCIGCGRKFSTL------PPGGVCPDCGSKVKL 160 (165)
T ss_dssp EEESSSCCEESSC------CGGGBCTTTCCBEEE
T ss_pred EECCCCCCcccCC------CCCCcCCCCCCccee
Confidence 4567799988643 223479999987543
No 160
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=28.74 E-value=17 Score=23.19 Aligned_cols=47 Identities=6% Similarity=-0.009 Sum_probs=27.8
Q ss_pred cCCCccccccccccCCCCeEecCCCCcccH-HHHHHHHhcCCcccccccchh
Q 028051 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHL-ACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~-~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
.+-..|..|...+..+. - ...=+..||. .|..+- ....|-.|...+.
T Consensus 25 ~~CF~C~~C~~~L~~~~-~-~~~~g~~yC~~~cy~~~--f~~~C~~C~~~~~ 72 (76)
T 1iml_A 25 RPCLKCEKCGKTLTSGG-H-AEHEGKPYCNHPCYSAM--FGPKGFGRGGAES 72 (76)
T ss_dssp TTTCBCTTTCCBCCTTT-E-EEETTEEEETTTHHHHH--SSCCCSSCCCSSS
T ss_pred CCCCCccccCccCCCCc-e-ECcCCeEeeCHHHHHHH--hCccCCCcCCcee
Confidence 34567888887775542 1 2234566777 576553 3455888865443
No 161
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.67 E-value=24 Score=22.14 Aligned_cols=40 Identities=20% Similarity=0.491 Sum_probs=24.3
Q ss_pred CCccccccccccC--CCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 157 EDVCPTCLEEYDA--ENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 157 ~~~C~ICle~~~~--~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
...|..|-..+.. +... +.--+..||..|. +|-.|++.|.
T Consensus 5 ~~~C~~C~~~I~~~~~~~~-~~a~~~~wH~~CF--------~C~~C~~~L~ 46 (72)
T 1x4l_A 5 SSGCAGCTNPISGLGGTKY-ISFEERQWHNDCF--------NCKKCSLSLV 46 (72)
T ss_dssp SCSBTTTTBCCCCSSSCSC-EECSSCEECTTTC--------BCSSSCCBCT
T ss_pred CCCCcCCCccccCCCCcce-EEECCcccCcccC--------EeccCCCcCC
Confidence 4568888877753 2222 2335677887774 4777776654
No 162
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=27.66 E-value=30 Score=21.77 Aligned_cols=17 Identities=29% Similarity=0.798 Sum_probs=13.6
Q ss_pred CCcccHH--HHHHHHhcCC
Q 028051 179 EHHFHLA--CIFEWMERSD 195 (214)
Q Consensus 179 ~H~FH~~--CI~~Wl~~~~ 195 (214)
||+-|.. ||.+||....
T Consensus 18 G~HcH~EA~tIA~~L~~~~ 36 (61)
T 3ph0_C 18 GHHCHQEAASIADWLAQEE 36 (61)
T ss_dssp TTTCHHHHHHHHHHHHTSS
T ss_pred cchHHHHHHHHHHHHHhCC
Confidence 6777765 9999998764
No 163
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.57 E-value=33 Score=22.35 Aligned_cols=40 Identities=25% Similarity=0.534 Sum_probs=25.3
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
....|..|-..+...+.+. -=+..||..|. +|-.|++.|.
T Consensus 14 ~~~~C~~C~~~I~~~e~v~--a~~~~wH~~CF--------~C~~C~~~L~ 53 (82)
T 2co8_A 14 AGDLCALCGEHLYVLERLC--VNGHFFHRSCF--------RCHTCEATLW 53 (82)
T ss_dssp SSCBCSSSCCBCCTTTBCC--BTTBCCBTTTC--------BCSSSCCBCC
T ss_pred CCCCCcccCCCcccceEEE--ECCCeeCCCcC--------EEcCCCCCcC
Confidence 4567999988775433222 34677887773 3667766654
No 164
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.15 E-value=48 Score=20.61 Aligned_cols=11 Identities=27% Similarity=0.468 Sum_probs=5.7
Q ss_pred Ccccccccccc
Q 028051 158 DVCPTCLEEYD 168 (214)
Q Consensus 158 ~~C~ICle~~~ 168 (214)
..|..|-..+.
T Consensus 6 ~~C~~C~~~I~ 16 (72)
T 1x61_A 6 SGCGGCGEDVV 16 (72)
T ss_dssp CCCSSSCSCCC
T ss_pred CCCccCCCccC
Confidence 34666655443
No 165
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=27.15 E-value=21 Score=21.46 Aligned_cols=41 Identities=17% Similarity=0.429 Sum_probs=25.6
Q ss_pred cccccccCCCCeEecCCCCcccHHHHHHHHh---cCCccccccc
Q 028051 162 TCLEEYDAENPRIITKCEHHFHLACIFEWME---RSDTCPVCNQ 202 (214)
Q Consensus 162 ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~---~~~tCPvCr~ 202 (214)
||...+..+.-+..-.|..-||..|+.---. ..-.||.|+.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 6776655333333456889999999863221 2346888864
No 166
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=26.27 E-value=10 Score=24.76 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=12.2
Q ss_pred HHHHhcCCcccccccchh
Q 028051 188 FEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 188 ~~Wl~~~~tCPvCr~~~~ 205 (214)
++||..--.||+|+..+.
T Consensus 2 d~~LLeiL~CP~ck~~L~ 19 (69)
T 2pk7_A 2 DTKLLDILACPICKGPLK 19 (69)
T ss_dssp -CCGGGTCCCTTTCCCCE
T ss_pred ChHHHhheeCCCCCCcCe
Confidence 455666667899888765
No 167
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=25.41 E-value=47 Score=23.42 Aligned_cols=50 Identities=12% Similarity=0.202 Sum_probs=27.9
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
+-..|..|...+......-...=|..||..|..+-+..+..|..|.+.|.
T Consensus 28 ~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~ 77 (131)
T 2xjy_A 28 DCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIR 77 (131)
T ss_dssp TTCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHCCCEECTTTCCEEC
T ss_pred HHcccCcCCCccccCCCeEEEECCEEeecCchhhhCCCccChhhcCCccC
Confidence 45567777766642111122234566777776665444346777777664
No 168
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.07 E-value=51 Score=21.08 Aligned_cols=40 Identities=25% Similarity=0.510 Sum_probs=25.2
Q ss_pred CCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 157 EDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
...|..|-..+..++.. +.-=+..||..|. +|-.|++.|.
T Consensus 15 ~~~C~~C~~~I~~~~~~-~~a~~~~~H~~CF--------~C~~C~~~L~ 54 (82)
T 1x63_A 15 SPKCKGCFKAIVAGDQN-VEYKGTVWHKDCF--------TCSNCKQVIG 54 (82)
T ss_dssp SCBCSSSCCBCCSSSCE-EECSSCEEETTTC--------CCSSSCCCCT
T ss_pred CCcCccCCcccccCceE-EEECccccccccC--------chhhCCCccC
Confidence 45788888877654433 2234677887764 3677776664
No 169
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=24.93 E-value=3.1 Score=25.21 Aligned_cols=14 Identities=21% Similarity=0.550 Sum_probs=9.8
Q ss_pred Ccccccccchhhhc
Q 028051 195 DTCPVCNQVRLKIF 208 (214)
Q Consensus 195 ~tCPvCr~~~~~~~ 208 (214)
-.||.|...++...
T Consensus 24 IrCpyCGyrii~Kv 37 (48)
T 4ayb_P 24 VRCPYCGYKIIFMV 37 (48)
T ss_dssp SCCTTTCCSCEECC
T ss_pred cccCccCcEEEEEe
Confidence 35999988776443
No 170
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=24.61 E-value=14 Score=25.80 Aligned_cols=9 Identities=44% Similarity=1.180 Sum_probs=4.3
Q ss_pred cccccccch
Q 028051 196 TCPVCNQVR 204 (214)
Q Consensus 196 tCPvCr~~~ 204 (214)
.||+|.+.+
T Consensus 49 ~CPvCgs~l 57 (112)
T 1l8d_A 49 KCPVCGREL 57 (112)
T ss_dssp ECTTTCCEE
T ss_pred CCCCCCCcC
Confidence 355555443
No 171
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=23.93 E-value=37 Score=23.91 Aligned_cols=50 Identities=10% Similarity=0.030 Sum_probs=33.7
Q ss_pred CCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchhh
Q 028051 157 EDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRLK 206 (214)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~~ 206 (214)
-.+|..|-..+......-...=+..||..|..+-+..+..|-.|.+.|..
T Consensus 32 CF~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~ 81 (122)
T 1m3v_A 32 CLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSG 81 (122)
T ss_dssp HHCCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSCC
T ss_pred CCCcCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcCc
Confidence 45788887776421011123356779999998877666689999988764
No 172
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.64 E-value=59 Score=20.12 Aligned_cols=40 Identities=20% Similarity=0.376 Sum_probs=24.1
Q ss_pred CCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 157 EDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
...|..|-..+..... ++.-=+..||..|. +|-.|++.|.
T Consensus 5 ~~~C~~C~~~I~~~~~-~~~a~~~~~H~~CF--------~C~~C~~~L~ 44 (72)
T 1wyh_A 5 SSGCSACGETVMPGSR-KLEYGGQTWHEHCF--------LCSGCEQPLG 44 (72)
T ss_dssp CCBCSSSCCBCCSSSC-EECSTTCCEETTTC--------BCTTTCCBTT
T ss_pred CCCCccCCCccccCcc-EEEECccccCcccC--------eECCCCCcCC
Confidence 4568888887754322 23335677787763 3666766654
No 173
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=23.64 E-value=9.8 Score=24.72 Aligned_cols=18 Identities=11% Similarity=-0.070 Sum_probs=12.9
Q ss_pred HHHHhcCCcccccccchh
Q 028051 188 FEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 188 ~~Wl~~~~tCPvCr~~~~ 205 (214)
++||..--.||+|+..+.
T Consensus 4 d~~LLeiL~CP~ck~~L~ 21 (67)
T 2jny_A 4 DPQLLEVLACPKDKGPLR 21 (67)
T ss_dssp CGGGTCCCBCTTTCCBCE
T ss_pred CHHHHHHhCCCCCCCcCe
Confidence 456666677999988764
No 174
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=23.42 E-value=17 Score=25.89 Aligned_cols=27 Identities=19% Similarity=0.413 Sum_probs=17.8
Q ss_pred eEecCCCCcccHHHHHHHHhcCC-cccccccchh
Q 028051 173 RIITKCEHHFHLACIFEWMERSD-TCPVCNQVRL 205 (214)
Q Consensus 173 ~~~l~C~H~FH~~CI~~Wl~~~~-tCPvCr~~~~ 205 (214)
.....|||.|-.. .... .||.|.....
T Consensus 74 ~~C~~CG~~~e~~------~~~~~~CP~Cgs~~~ 101 (119)
T 2kdx_A 74 LECKDCSHVFKPN------ALDYGVCEKCHSKNV 101 (119)
T ss_dssp EECSSSSCEECSC------CSTTCCCSSSSSCCC
T ss_pred EEcCCCCCEEeCC------CCCCCcCccccCCCc
Confidence 3456678877752 3356 7999977644
No 175
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=22.12 E-value=43 Score=23.62 Aligned_cols=33 Identities=15% Similarity=0.375 Sum_probs=13.8
Q ss_pred CccccccccccCCCCeEecCCCCcccHHHHHHHH
Q 028051 158 DVCPTCLEEYDAENPRIITKCEHHFHLACIFEWM 191 (214)
Q Consensus 158 ~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl 191 (214)
..|..|-..+..+... ...=+..||..|..+.+
T Consensus 37 F~C~~C~~~L~~g~~f-~~~~g~~yC~~cy~~~~ 69 (123)
T 2l3k_A 37 FKCAACQKHFSVGDRY-LLINSDIVCEQDIYEWT 69 (123)
T ss_dssp CBCTTTCCBCCTTCEE-EECSSSEEEGGGHHHHH
T ss_pred CccccCCCCCCCCCcE-EeeCCEEEcHHHhHHHh
Confidence 3455554444222211 12224455555555544
No 176
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=22.03 E-value=23 Score=22.61 Aligned_cols=45 Identities=22% Similarity=0.443 Sum_probs=26.6
Q ss_pred CCccccccccccCCCCeEec---CCCCcccHHHHHHH---Hh-----cCCcccccccc
Q 028051 157 EDVCPTCLEEYDAENPRIIT---KCEHHFHLACIFEW---ME-----RSDTCPVCNQV 203 (214)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l---~C~H~FH~~CI~~W---l~-----~~~tCPvCr~~ 203 (214)
.-.| ||......+. .+.- .|..-||..|+.-- .+ .+-.||.||..
T Consensus 10 ~v~C-~C~~~~~~g~-mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 10 KVRC-ICSSTMVNDS-MIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp EECC-TTCCCSCCSC-EEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CEEe-ECCCCcCCCC-EEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 3446 8976554443 3332 48889999998321 01 12459999753
No 177
>2i50_A Ubiquitin carboxyl-terminal hydrolase 16; alpha/beta zinc-finger, ring-finger, ZNF-UBP, metalloprotein, ubiquitin-binding protein, USP; NMR {Homo sapiens}
Probab=21.48 E-value=23 Score=25.82 Aligned_cols=29 Identities=14% Similarity=0.160 Sum_probs=21.9
Q ss_pred ecCCCCcccHHHHHHHHhc-----CCcccccccc
Q 028051 175 ITKCEHHFHLACIFEWMER-----SDTCPVCNQV 203 (214)
Q Consensus 175 ~l~C~H~FH~~CI~~Wl~~-----~~tCPvCr~~ 203 (214)
...|.|.++..++..|-.. ...|+.|++.
T Consensus 4 ~~~C~H~~~~~~l~~~~~~~~~~~~~~C~~C~~~ 37 (126)
T 2i50_A 4 MPVCRHIRKGLEQGNLKKALVNVEWNICQDCKTD 37 (126)
T ss_dssp -CCCSCHHHHCCHHHHHHHHSSCCSSSCHHHHTC
T ss_pred CCCCcChhhccccccccccccCCCCCcCcccccc
Confidence 4679999999999888532 2579999864
No 178
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.28 E-value=29 Score=21.64 Aligned_cols=38 Identities=24% Similarity=0.526 Sum_probs=19.9
Q ss_pred CCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 157 EDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
...|..|-..+.. .. +.--+..||..|. +|-.|++.|.
T Consensus 5 ~~~C~~C~~~I~~-~~--~~a~~~~~H~~CF--------~C~~C~~~L~ 42 (70)
T 2d8x_A 5 SSGCHQCGEFIIG-RV--IKAMNNSWHPECF--------RCDLCQEVLA 42 (70)
T ss_dssp SSBCSSSCCBCCS-CC--EEETTEEECTTTS--------BCSSSCCBCS
T ss_pred CCcCccCCCEecc-eE--EEECcccccccCC--------EeCCCCCcCC
Confidence 3457777666542 21 2223556666663 3556655543
No 179
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.27 E-value=81 Score=19.73 Aligned_cols=41 Identities=17% Similarity=0.457 Sum_probs=25.4
Q ss_pred CCCccccccccccCCCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
....|..|-..+...+.. +..=+..||..|. +|-.|++.|.
T Consensus 10 ~~~~C~~C~~~I~~~~~~-~~a~~~~~H~~CF--------~C~~C~~~L~ 50 (77)
T 1g47_A 10 ASATCERCKGGFAPAEKI-VNSNGELYHEQCF--------VCAQCFQQFP 50 (77)
T ss_dssp CCCBCSSSCCBCCSTTTC-EEETTEEECTTTC--------CCTTTCCCCG
T ss_pred CCCCchhcCCccCCCceE-EEeCccEeccccC--------eECCCCCCCC
Confidence 456799998887543322 2224667887773 3666766654
No 180
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.78 E-value=56 Score=20.67 Aligned_cols=40 Identities=18% Similarity=0.504 Sum_probs=24.8
Q ss_pred CCccccccccccC--CCCeEecCCCCcccHHHHHHHHhcCCcccccccchh
Q 028051 157 EDVCPTCLEEYDA--ENPRIITKCEHHFHLACIFEWMERSDTCPVCNQVRL 205 (214)
Q Consensus 157 ~~~C~ICle~~~~--~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~~~ 205 (214)
...|..|-..+.. .. ..+.--+..||..|. +|-.|++.|.
T Consensus 5 ~~~C~~C~~~I~~~g~~-~~~~a~~~~wH~~CF--------~C~~C~~~L~ 46 (76)
T 1x68_A 5 SSGCVACSKPISGLTGA-KFICFQDSQWHSECF--------NCGKCSVSLV 46 (76)
T ss_dssp CCCCTTTCCCCCTTTTC-CEEEETTEEEEGGGC--------BCTTTCCBCS
T ss_pred CCCCccCCCcccCCCCc-eeEEECCcccCcccC--------ChhhCCCcCC
Confidence 4568888887753 22 223335677888774 4677766654
No 181
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=20.19 E-value=43 Score=23.86 Aligned_cols=19 Identities=32% Similarity=0.812 Sum_probs=15.2
Q ss_pred CCCcccHH--HHHHHHhcCCc
Q 028051 178 CEHHFHLA--CIFEWMERSDT 196 (214)
Q Consensus 178 C~H~FH~~--CI~~Wl~~~~t 196 (214)
=||+.|.. ||..||.....
T Consensus 18 TG~H~HqEA~tIAdwL~~~~~ 38 (116)
T 2p58_C 18 TGNHYHEEANCIAEWLHLKGE 38 (116)
T ss_dssp HTTTCHHHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHHHhCCc
Confidence 37888976 99999987643
No 182
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=20.09 E-value=30 Score=23.66 Aligned_cols=43 Identities=21% Similarity=0.396 Sum_probs=25.2
Q ss_pred CCCccccccccccCCCCeEecCCC---CcccHHHHHHHHhc----CCcccc-ccc
Q 028051 156 EEDVCPTCLEEYDAENPRIITKCE---HHFHLACIFEWMER----SDTCPV-CNQ 202 (214)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~---H~FH~~CI~~Wl~~----~~tCPv-Cr~ 202 (214)
+...| ||..... ++-+..=.|. ..||..||. |.. .-.||. |++
T Consensus 25 ~~~yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 25 EEVYC-FCRNVSY-GPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CSCCS-TTTCCCS-SSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCcEE-EeCCCCC-CCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 44457 9987543 3312222333 689999996 322 235999 874
No 183
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=20.09 E-value=32 Score=26.66 Aligned_cols=9 Identities=33% Similarity=1.154 Sum_probs=6.9
Q ss_pred Ccccccccc
Q 028051 195 DTCPVCNQV 203 (214)
Q Consensus 195 ~tCPvCr~~ 203 (214)
..||+|..+
T Consensus 172 ~~CP~C~~~ 180 (191)
T 1lko_A 172 ELCPACAHP 180 (191)
T ss_dssp SBCTTTCCB
T ss_pred CCCCCCcCC
Confidence 479999765
No 184
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=20.06 E-value=43 Score=23.79 Aligned_cols=19 Identities=42% Similarity=0.859 Sum_probs=15.2
Q ss_pred CCCcccHH--HHHHHHhcCCc
Q 028051 178 CEHHFHLA--CIFEWMERSDT 196 (214)
Q Consensus 178 C~H~FH~~--CI~~Wl~~~~t 196 (214)
=||+.|.. ||-.||.....
T Consensus 17 TG~H~HqEA~tIAdwL~~~~~ 37 (115)
T 2uwj_G 17 SGQHCHEEALCIAEWLERLGQ 37 (115)
T ss_dssp HTTTCHHHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHHHhCCc
Confidence 37888976 99999987643
Done!